Homology
BLAST of CcUC02G022990 vs. NCBI nr
Match:
XP_038887809.1 (transcription termination factor MTEF1, chloroplastic [Benincasa hispida])
HSP 1 Score: 470.7 bits (1210), Expect = 9.0e-129
Identity = 235/264 (89.02%), Postives = 248/264 (93.94%), Query Frame = 0
Query: 1 MAVGAATPFTTVSSFSPSNAPTPRSRL-LPLSFINFRTAHHQNLRYLRSLHIIDSRTRFH 60
MAVGAA PFTTVSSFS PT RSRL LP FINFRT H QNLRYL+SLHIIDS+TRFH
Sbjct: 6 MAVGAAAPFTTVSSFSHFKTPTTRSRLHLPPPFINFRTPHQQNLRYLKSLHIIDSQTRFH 65
Query: 61 SPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLNADLSASV 120
SPDA++QIL+TVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIA +FHFL ADLSASV
Sbjct: 66 SPDAIDQILTTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIAPVFHFLAADLSASV 125
Query: 121 QESRGLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKIR 180
QESRGLILRCPRIL SDVELCL+PTH+FLKQLGIENLKSPSNLNSHLLNTRVEKLRSKIR
Sbjct: 126 QESRGLILRCPRILLSDVELCLKPTHKFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKIR 185
Query: 181 FLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFPQYFGFSL 240
F++EIGFS EEAAK+CGRMPA+FGYSVEENL+PKYEYLVKEMERDLEELKGFPQYFGFSL
Sbjct: 186 FMQEIGFSHEEAAKICGRMPAMFGYSVEENLKPKYEYLVKEMERDLEELKGFPQYFGFSL 245
Query: 241 EGRIMPRHLHLKQRNLRIPLNRML 264
E RIMPRHLHLKQRNLRIPLNRML
Sbjct: 246 EARIMPRHLHLKQRNLRIPLNRML 269
BLAST of CcUC02G022990 vs. NCBI nr
Match:
XP_008454873.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] >KAA0031250.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK06701.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])
HSP 1 Score: 423.7 bits (1088), Expect = 1.3e-114
Identity = 220/271 (81.18%), Postives = 237/271 (87.45%), Query Frame = 0
Query: 1 MAVGA---ATPFTTVSSFSPSNAPTPRSR-----LLPLSFINFRTAHHQNLRYLRSLHII 60
MAVGA + F VSSFS PTP +R L P S INFRT+H QNLRYL+SL+II
Sbjct: 1 MAVGAPVLSHSFPIVSSFSHFTTPTPTTRSRHPHLHPPS-INFRTSHQQNLRYLKSLNII 60
Query: 61 DSRTRFHSPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLN 120
D +TRF SPDAV+QIL+TVHFLKSKGFSDSDFPRLAF CP LFT NFD TDIA +FHFL
Sbjct: 61 DPQTRFRSPDAVDQILTTVHFLKSKGFSDSDFPRLAFFCPNLFTSNFDTTDIAPVFHFLA 120
Query: 121 ADLSASVQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVE 180
AD+SAS+QESRGLILRCP+ILFSDVELCL+PTHRFLKQLGIENLKSPSNLNSHLLNTRVE
Sbjct: 121 ADISASIQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVE 180
Query: 181 KLRSKIRFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFP 240
KLR+KIRFL+EIGFS EEA+KVCGRMPAIFGYSV+ENLRPKYEYLVK MERDLEELKGFP
Sbjct: 181 KLRNKIRFLQEIGFSYEEASKVCGRMPAIFGYSVKENLRPKYEYLVKVMERDLEELKGFP 240
Query: 241 QYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
QYFGFSLEGRIMPRHLHLKQR L IPLN ML
Sbjct: 241 QYFGFSLEGRIMPRHLHLKQRGLHIPLNSML 270
BLAST of CcUC02G022990 vs. NCBI nr
Match:
XP_011658929.1 (transcription termination factor MTEF1, chloroplastic [Cucumis sativus] >KGN43986.1 hypothetical protein Csa_017691 [Cucumis sativus])
HSP 1 Score: 417.9 bits (1073), Expect = 6.9e-113
Identity = 214/271 (78.97%), Postives = 234/271 (86.35%), Query Frame = 0
Query: 1 MAVG---AATPFTTVSSFSPSNAPTPRSR-----LLPLSFINFRTAHHQNLRYLRSLHII 60
MAVG + F + SFS PTP +R L P S INFRT+HHQN+RYL+SL++I
Sbjct: 1 MAVGPPVLSHSFLALYSFSHFTTPTPTTRSRHPHLHPPS-INFRTSHHQNIRYLKSLNVI 60
Query: 61 DSRTRFHSPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLN 120
D +TRFHSPDAV QIL+TVHFLKSKGFSDSDFPRLAFLCP LFT NFD TDIA +F FL
Sbjct: 61 DPQTRFHSPDAVHQILTTVHFLKSKGFSDSDFPRLAFLCPNLFTSNFDTTDIAPVFQFLA 120
Query: 121 ADLSASVQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVE 180
D+SAS+QESRGLILRCP+ILFSDVELCL+PTHRFLKQLGIENLKSPSNLNSHLLNTRVE
Sbjct: 121 TDISASLQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVE 180
Query: 181 KLRSKIRFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFP 240
KLRSKIRF +EIGFS EEA+KVCGRMPA+FGYSV+ENL+PKYEY VKEMERDLEELKGFP
Sbjct: 181 KLRSKIRFFQEIGFSHEEASKVCGRMPAMFGYSVKENLKPKYEYFVKEMERDLEELKGFP 240
Query: 241 QYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
QYFGFSLEGRIMPRHLHLKQR L IPLN ML
Sbjct: 241 QYFGFSLEGRIMPRHLHLKQRGLHIPLNSML 270
BLAST of CcUC02G022990 vs. NCBI nr
Match:
KAG7022425.1 (Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 410.2 bits (1053), Expect = 1.4e-110
Identity = 209/265 (78.87%), Postives = 231/265 (87.17%), Query Frame = 0
Query: 1 MAVGA-ATPFTTVSSFSPSNAPTPRSRLLPLSFINFRTAHHQNLRYLRSLHIIDSR-TRF 60
MAVGA + PFTT+SS S SN PT R P F+NFRTAH+ NLRYL+SLH++DSR T+F
Sbjct: 1 MAVGALSRPFTTISSLSHSNTPTSRP---PPPFLNFRTAHYHNLRYLKSLHLLDSRSTKF 60
Query: 61 HSPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLNADLSAS 120
SPDAV IL+TVHFLKSKGFSDSDFP LAFLCPQLF+P+F+PTDIA +F FL ADLSAS
Sbjct: 61 RSPDAVHSILATVHFLKSKGFSDSDFPTLAFLCPQLFSPDFEPTDIAPVFDFLAADLSAS 120
Query: 121 VQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKI 180
+QESRG+ILRCPR+LFSDVELCLRPT RFLKQ+GIENL +PSNL SHLLNTRVEKLR K
Sbjct: 121 IQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKF 180
Query: 181 RFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFPQYFGFS 240
RFL+E+GFS EEAAKVC RMPAIFGYSVEENLRPKYEYLV EMERD+EELK FP YF FS
Sbjct: 181 RFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFS 240
Query: 241 LEGRIMPRHLHLKQRNLRIPLNRML 264
LE RI PRHLHLKQRNLRIPL+RML
Sbjct: 241 LERRIAPRHLHLKQRNLRIPLHRML 262
BLAST of CcUC02G022990 vs. NCBI nr
Match:
XP_022931610.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita moschata])
HSP 1 Score: 409.5 bits (1051), Expect = 2.5e-110
Identity = 209/265 (78.87%), Postives = 230/265 (86.79%), Query Frame = 0
Query: 1 MAVGA-ATPFTTVSSFSPSNAPTPRSRLLPLSFINFRTAHHQNLRYLRSLHIIDSR-TRF 60
MAVGA + PFTT+SS S SN PT R P F+NFRTAH+ NLRYL+SLH++DSR T+F
Sbjct: 1 MAVGALSRPFTTISSLSHSNTPTSRP---PPPFLNFRTAHYHNLRYLKSLHLLDSRSTKF 60
Query: 61 HSPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLNADLSAS 120
SPDAV IL+TVHFLKSKGFSDSDFP LA LCPQLF+P+FDPTDIA +F FL ADLSAS
Sbjct: 61 RSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSAS 120
Query: 121 VQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKI 180
+QESRG+ILRCPR+LFSDVELCLRPT RFLKQ+GIENL +PSNL SHLLNTRVEKLR K
Sbjct: 121 IQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKF 180
Query: 181 RFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFPQYFGFS 240
RFL+E+GFS EEAAKVC RMPAIFGYSVEENLRPKYEYLV EMERD+EELK FP YF FS
Sbjct: 181 RFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFS 240
Query: 241 LEGRIMPRHLHLKQRNLRIPLNRML 264
LE RI PRHLHLKQRNLRIPL+RML
Sbjct: 241 LERRIAPRHLHLKQRNLRIPLHRML 262
BLAST of CcUC02G022990 vs. ExPASy Swiss-Prot
Match:
Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)
HSP 1 Score: 143.3 bits (360), Expect = 4.3e-33
Identity = 90/230 (39.13%), Postives = 134/230 (58.26%), Query Frame = 0
Query: 41 QNLRYLRSLHIIDSRTRFHSPD----AVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFT 100
+ L YL+ L++ + +P + ++S L S G S R+ + P L T
Sbjct: 35 EKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLT 94
Query: 101 PNFDP-TDIASIFHFLNADLSASVQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIEN 160
DP ++I + FL+ ++S S Q+ I RCPR+L S V+ LRP FLK LG
Sbjct: 95 S--DPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 154
Query: 161 LKSPSNLNSHLLNTRVEK-LRSKIRFLKE-IGFSQEEAAKVCGRMPAIFGYSVEENLRPK 220
+ ++ N+ LL + VE+ L KI +L+E +GF++EE AK+ R PA+ YSV+ NL PK
Sbjct: 155 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 214
Query: 221 YEYLVKEMERDLEELKGFPQYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
E+ ++EM D++ELK FPQYF FSLE +I PRH LK+ + +PL+ ML
Sbjct: 215 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEML 262
BLAST of CcUC02G022990 vs. ExPASy Swiss-Prot
Match:
F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 1.2e-14
Identity = 58/214 (27.10%), Postives = 105/214 (49.07%), Query Frame = 0
Query: 51 IIDSRTRFHSPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHF 110
I+ R + + + T+ FL++ G + + ++ P + T + + S F
Sbjct: 252 ILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILT--YSRQKLTSTVEF 311
Query: 111 LNADLSASVQESRGLIL-RCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNT 170
L+ + +E G IL RCP I+ VE LRPT + + L ++ +
Sbjct: 312 LSQ--TGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLS 371
Query: 171 RVEKLRSKIRFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELK 230
L+ F E GF +E + R A++ +S++EN+ PK++Y + M+ EL
Sbjct: 372 IESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELV 431
Query: 231 GFPQYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
FPQ+FG+SL+ RI PR+ +++ +R+ LN++L
Sbjct: 432 KFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVL 460
BLAST of CcUC02G022990 vs. ExPASy Swiss-Prot
Match:
F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 3.2e-12
Identity = 66/235 (28.09%), Postives = 103/235 (43.83%), Query Frame = 0
Query: 71 VHFLKSKGFSDSDFPRLAFLCPQLFTPNFDP--TDIASIFHFLNADLSASVQESRGLILR 130
+++LK G S + RL P L + + + F++L +E IL
Sbjct: 356 INYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIP-----KEGMKRILV 415
Query: 131 CPRILFS-DVELCLRPTHRFLKQLGIENLKSPSNL---NSHLLNTRVEKLRSKIRF-LKE 190
IL+ D+E + P RFL+++GI N + L S L N+ +K+R + F L
Sbjct: 416 VKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTR 475
Query: 191 IGFSQEEAAKVCGRMPAIFGYSV-----------------------------------EE 250
G +Q++ KV PA+ G S+ +
Sbjct: 476 AGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD 535
Query: 251 NLRPKYEYLVKEMERDLEELKGFPQYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
NLRPKY YL + M R L++L FP++F +SLE RI+PRH + + + L ML
Sbjct: 536 NLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYML 585
BLAST of CcUC02G022990 vs. ExPASy Swiss-Prot
Match:
Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)
HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11
Identity = 52/201 (25.87%), Postives = 92/201 (45.77%), Query Frame = 0
Query: 71 VHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLNADLSASVQESRGLILRCP 130
+ FL G +S ++ P LF+ + + + +L ++ + ++ P
Sbjct: 259 ISFLMGLGIPNSKIGQIVAATPSLFSYSVE-NSLRPTIRYLIEEVGIKETDVGKVVQLSP 318
Query: 131 RILFSDVELCLRPTHRFL-KQLGIENLKSPSNLNSH--LLNTRVEK-LRSKIRFLKEIGF 190
+IL +++ + FL K+LG + H LL+ ++ +I FL+ IG
Sbjct: 319 QILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGM 378
Query: 191 SQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFPQYFGFSLEGRIMPR 250
+ KV + + S+E+NL+PKY YLV E+ ++ L +P Y SL+ RI PR
Sbjct: 379 CNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPR 438
Query: 251 HLHL----KQRNLRIPLNRML 264
H L K R PL+ ++
Sbjct: 439 HRFLVELKKVRKGPFPLSSLV 458
BLAST of CcUC02G022990 vs. ExPASy Swiss-Prot
Match:
Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)
HSP 1 Score: 70.5 bits (171), Expect = 3.6e-11
Identity = 54/205 (26.34%), Postives = 99/205 (48.29%), Query Frame = 0
Query: 65 EQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDP--TDIASIFHFLNADLSASVQES 124
E++ + F ++ G ++ ++ P+L + + D T I S L D + +
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGK- 171
Query: 125 RGLILRCPRILFSDVELCLRPTHRFLKQ---LGIENLKSPSNLNSHLLNTRVEK-LRSKI 184
++++ P ++ V+ LRPT FLK L + +KS LL V K L+
Sbjct: 172 --VLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNY 231
Query: 185 RFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFPQYFGFS 244
+LKE GF + A + P I SV+ +L+P+ +LV+ M R ++E+ +P++F
Sbjct: 232 DYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHG 291
Query: 245 LEGRIMPRHLHLKQRNLRIPLNRML 264
L+ ++ R +K+ N+ L ML
Sbjct: 292 LKKKVESRFKLVKKNNIDCSLREML 313
BLAST of CcUC02G022990 vs. ExPASy TrEMBL
Match:
A0A5D3C479 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00020 PE=3 SV=1)
HSP 1 Score: 423.7 bits (1088), Expect = 6.1e-115
Identity = 220/271 (81.18%), Postives = 237/271 (87.45%), Query Frame = 0
Query: 1 MAVGA---ATPFTTVSSFSPSNAPTPRSR-----LLPLSFINFRTAHHQNLRYLRSLHII 60
MAVGA + F VSSFS PTP +R L P S INFRT+H QNLRYL+SL+II
Sbjct: 1 MAVGAPVLSHSFPIVSSFSHFTTPTPTTRSRHPHLHPPS-INFRTSHQQNLRYLKSLNII 60
Query: 61 DSRTRFHSPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLN 120
D +TRF SPDAV+QIL+TVHFLKSKGFSDSDFPRLAF CP LFT NFD TDIA +FHFL
Sbjct: 61 DPQTRFRSPDAVDQILTTVHFLKSKGFSDSDFPRLAFFCPNLFTSNFDTTDIAPVFHFLA 120
Query: 121 ADLSASVQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVE 180
AD+SAS+QESRGLILRCP+ILFSDVELCL+PTHRFLKQLGIENLKSPSNLNSHLLNTRVE
Sbjct: 121 ADISASIQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVE 180
Query: 181 KLRSKIRFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFP 240
KLR+KIRFL+EIGFS EEA+KVCGRMPAIFGYSV+ENLRPKYEYLVK MERDLEELKGFP
Sbjct: 181 KLRNKIRFLQEIGFSYEEASKVCGRMPAIFGYSVKENLRPKYEYLVKVMERDLEELKGFP 240
Query: 241 QYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
QYFGFSLEGRIMPRHLHLKQR L IPLN ML
Sbjct: 241 QYFGFSLEGRIMPRHLHLKQRGLHIPLNSML 270
BLAST of CcUC02G022990 vs. ExPASy TrEMBL
Match:
A0A1S3BZK0 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495186 PE=3 SV=1)
HSP 1 Score: 423.7 bits (1088), Expect = 6.1e-115
Identity = 220/271 (81.18%), Postives = 237/271 (87.45%), Query Frame = 0
Query: 1 MAVGA---ATPFTTVSSFSPSNAPTPRSR-----LLPLSFINFRTAHHQNLRYLRSLHII 60
MAVGA + F VSSFS PTP +R L P S INFRT+H QNLRYL+SL+II
Sbjct: 1 MAVGAPVLSHSFPIVSSFSHFTTPTPTTRSRHPHLHPPS-INFRTSHQQNLRYLKSLNII 60
Query: 61 DSRTRFHSPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLN 120
D +TRF SPDAV+QIL+TVHFLKSKGFSDSDFPRLAF CP LFT NFD TDIA +FHFL
Sbjct: 61 DPQTRFRSPDAVDQILTTVHFLKSKGFSDSDFPRLAFFCPNLFTSNFDTTDIAPVFHFLA 120
Query: 121 ADLSASVQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVE 180
AD+SAS+QESRGLILRCP+ILFSDVELCL+PTHRFLKQLGIENLKSPSNLNSHLLNTRVE
Sbjct: 121 ADISASIQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVE 180
Query: 181 KLRSKIRFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFP 240
KLR+KIRFL+EIGFS EEA+KVCGRMPAIFGYSV+ENLRPKYEYLVK MERDLEELKGFP
Sbjct: 181 KLRNKIRFLQEIGFSYEEASKVCGRMPAIFGYSVKENLRPKYEYLVKVMERDLEELKGFP 240
Query: 241 QYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
QYFGFSLEGRIMPRHLHLKQR L IPLN ML
Sbjct: 241 QYFGFSLEGRIMPRHLHLKQRGLHIPLNSML 270
BLAST of CcUC02G022990 vs. ExPASy TrEMBL
Match:
A0A0A0K870 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075660 PE=3 SV=1)
HSP 1 Score: 417.9 bits (1073), Expect = 3.4e-113
Identity = 214/271 (78.97%), Postives = 234/271 (86.35%), Query Frame = 0
Query: 1 MAVG---AATPFTTVSSFSPSNAPTPRSR-----LLPLSFINFRTAHHQNLRYLRSLHII 60
MAVG + F + SFS PTP +R L P S INFRT+HHQN+RYL+SL++I
Sbjct: 1 MAVGPPVLSHSFLALYSFSHFTTPTPTTRSRHPHLHPPS-INFRTSHHQNIRYLKSLNVI 60
Query: 61 DSRTRFHSPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLN 120
D +TRFHSPDAV QIL+TVHFLKSKGFSDSDFPRLAFLCP LFT NFD TDIA +F FL
Sbjct: 61 DPQTRFHSPDAVHQILTTVHFLKSKGFSDSDFPRLAFLCPNLFTSNFDTTDIAPVFQFLA 120
Query: 121 ADLSASVQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVE 180
D+SAS+QESRGLILRCP+ILFSDVELCL+PTHRFLKQLGIENLKSPSNLNSHLLNTRVE
Sbjct: 121 TDISASLQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVE 180
Query: 181 KLRSKIRFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFP 240
KLRSKIRF +EIGFS EEA+KVCGRMPA+FGYSV+ENL+PKYEY VKEMERDLEELKGFP
Sbjct: 181 KLRSKIRFFQEIGFSHEEASKVCGRMPAMFGYSVKENLKPKYEYFVKEMERDLEELKGFP 240
Query: 241 QYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
QYFGFSLEGRIMPRHLHLKQR L IPLN ML
Sbjct: 241 QYFGFSLEGRIMPRHLHLKQRGLHIPLNSML 270
BLAST of CcUC02G022990 vs. ExPASy TrEMBL
Match:
A0A6J1EZY9 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437777 PE=3 SV=1)
HSP 1 Score: 409.5 bits (1051), Expect = 1.2e-110
Identity = 209/265 (78.87%), Postives = 230/265 (86.79%), Query Frame = 0
Query: 1 MAVGA-ATPFTTVSSFSPSNAPTPRSRLLPLSFINFRTAHHQNLRYLRSLHIIDSR-TRF 60
MAVGA + PFTT+SS S SN PT R P F+NFRTAH+ NLRYL+SLH++DSR T+F
Sbjct: 1 MAVGALSRPFTTISSLSHSNTPTSRP---PPPFLNFRTAHYHNLRYLKSLHLLDSRSTKF 60
Query: 61 HSPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLNADLSAS 120
SPDAV IL+TVHFLKSKGFSDSDFP LA LCPQLF+P+FDPTDIA +F FL ADLSAS
Sbjct: 61 RSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSAS 120
Query: 121 VQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKI 180
+QESRG+ILRCPR+LFSDVELCLRPT RFLKQ+GIENL +PSNL SHLLNTRVEKLR K
Sbjct: 121 IQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKF 180
Query: 181 RFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFPQYFGFS 240
RFL+E+GFS EEAAKVC RMPAIFGYSVEENLRPKYEYLV EMERD+EELK FP YF FS
Sbjct: 181 RFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFS 240
Query: 241 LEGRIMPRHLHLKQRNLRIPLNRML 264
LE RI PRHLHLKQRNLRIPL+RML
Sbjct: 241 LERRIAPRHLHLKQRNLRIPLHRML 262
BLAST of CcUC02G022990 vs. ExPASy TrEMBL
Match:
A0A6J1JEA2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486102 PE=3 SV=1)
HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109
Identity = 208/269 (77.32%), Postives = 230/269 (85.50%), Query Frame = 0
Query: 1 MAVGAAT-PFTTVSSFSPSNAPT----PRSRLLPLSFINFRTAHHQNLRYLRSLHIIDSR 60
MAVGA + PFTT+SS S SN+PT P P F+NFRTAH NLRYL+SL ++DS
Sbjct: 1 MAVGALSHPFTTISSLSHSNSPTSRPPPSPPPSPPPFLNFRTAHSHNLRYLKSLRLLDSH 60
Query: 61 -TRFHSPDAVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLNAD 120
T+F SPDAV IL+TVHFLKSKGFSDSDFP LAFLCPQLF+P+FDPTDIA +F FL AD
Sbjct: 61 STKFRSPDAVHSILATVHFLKSKGFSDSDFPTLAFLCPQLFSPDFDPTDIAPVFDFLAAD 120
Query: 121 LSASVQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVEKL 180
LSAS+QESRG+ILRCP++LFSDVELCLRPT RFLKQ+G+ENL +PSNL SHLLNTRVEKL
Sbjct: 121 LSASIQESRGMILRCPKLLFSDVELCLRPTLRFLKQIGLENLNTPSNLKSHLLNTRVEKL 180
Query: 181 RSKIRFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFPQY 240
R K RFL+E+GFS EEAAKVC RMPA+FGYSVEENLRPKYEYLV EMERDLEELK FPQY
Sbjct: 181 RGKFRFLQELGFSHEEAAKVCRRMPALFGYSVEENLRPKYEYLVNEMERDLEELKEFPQY 240
Query: 241 FGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
F FSLE RI PRHLHLKQRNLRIPLNRML
Sbjct: 241 FAFSLERRIAPRHLHLKQRNLRIPLNRML 269
BLAST of CcUC02G022990 vs. TAIR 10
Match:
AT3G18870.1 (Mitochondrial transcription termination factor family protein )
HSP 1 Score: 298.9 bits (764), Expect = 4.4e-81
Identity = 151/253 (59.68%), Postives = 190/253 (75.10%), Query Frame = 0
Query: 12 VSSFSPSNAPTPRSRLLPLSFINFRTAHHQNLRYLRSLHIIDSRTRFHSP-DAVEQILST 71
+SSFS +P+ L ++ F+T+H +NLR+L SL I+ R P + + ILS
Sbjct: 13 LSSFSSPPSPSSSKPL----YLKFQTSHRENLRHLSSLGIVPQNPRLAPPANDLSVILSA 72
Query: 72 VHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLNADLSASVQESRGLILRCP 131
V+ LKSKG SD DFPRL FLCPQLF+P FD + + +F FL +L AS +ESRGLI+ CP
Sbjct: 73 VNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCP 132
Query: 132 RILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKIRFLKEIGFSQEE 191
ILFSDVE CLRPT +LK+LG+ NL S N+H+LNTRVEKLR+K+RFLK IGF EE
Sbjct: 133 NILFSDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVEKLRAKMRFLKSIGFEHEE 192
Query: 192 AAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFPQYFGFSLEGRIMPRHLHL 251
AA+VCGR+PAIFGYSVE+NLRPK+E+LV +MER+LEELK FPQYF FSL RI PRH HL
Sbjct: 193 AARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWHL 252
Query: 252 KQRNLRIPLNRML 264
K++N+R+ L+RML
Sbjct: 253 KKKNVRVSLSRML 261
BLAST of CcUC02G022990 vs. TAIR 10
Match:
AT2G34620.1 (Mitochondrial transcription termination factor family protein )
HSP 1 Score: 159.8 bits (403), Expect = 3.2e-39
Identity = 87/203 (42.86%), Postives = 131/203 (64.53%), Query Frame = 0
Query: 64 VEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFTPNFDPTDIASIFHFLNADLSASVQESR 123
++ I S +HFL+SKG +D PR+ +CP++ T + T++ +F FL+ DL R
Sbjct: 84 LDSIQSVLHFLQSKGIYPNDLPRILGMCPKILTSDV-RTELYPVFMFLSNDLHVPENAFR 143
Query: 124 GLILRCPRILFSDVELCLRPTHRFLKQLGIENLKSPSNLNSHLLNTRVE-KLRSKIRFLK 183
+I +CPR+L S VE L+P +L++LG+++L++ + + LL + VE L K+RFL+
Sbjct: 144 RVIKKCPRLLISSVEDQLKPALFYLQRLGLKDLEALAYQDPILLVSSVEHTLIPKLRFLE 203
Query: 184 EIGFSQEEAAKVCGRMPAIFGYSVEENLRPKYEYLVKEMERDLEELKGFPQYFGFSLEGR 243
IGFS+ EA + R PA+F +S+E N +PK +Y + E++ LE LK FPQYF FSLE R
Sbjct: 204 SIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKR 263
Query: 244 IMPRHLHLKQRNLRIPLNRMLFS 266
I PRHL +R L +PL+ ML S
Sbjct: 264 IKPRHLESMERGLELPLSLMLKS 285
BLAST of CcUC02G022990 vs. TAIR 10
Match:
AT2G03050.1 (Mitochondrial transcription termination factor family protein )
HSP 1 Score: 143.3 bits (360), Expect = 3.1e-34
Identity = 90/230 (39.13%), Postives = 134/230 (58.26%), Query Frame = 0
Query: 41 QNLRYLRSLHIIDSRTRFHSPD----AVEQILSTVHFLKSKGFSDSDFPRLAFLCPQLFT 100
+ L YL+ L++ + +P + ++S L S G S R+ + P L T
Sbjct: 34 EKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLT 93
Query: 101 PNFDP-TDIASIFHFLNADLSASVQESRGLILRCPRILFSDVELCLRPTHRFLKQLGIEN 160
DP ++I + FL+ ++S S Q+ I RCPR+L S V+ LRP FLK LG
Sbjct: 94 S--DPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 153
Query: 161 LKSPSNLNSHLLNTRVEK-LRSKIRFLKE-IGFSQEEAAKVCGRMPAIFGYSVEENLRPK 220
+ ++ N+ LL + VE+ L KI +L+E +GF++EE AK+ R PA+ YSV+ NL PK
Sbjct: 154 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 213
Query: 221 YEYLVKEMERDLEELKGFPQYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
E+ ++EM D++ELK FPQYF FSLE +I PRH LK+ + +PL+ ML
Sbjct: 214 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEML 261
BLAST of CcUC02G022990 vs. TAIR 10
Match:
AT2G36000.1 (Mitochondrial transcription termination factor family protein )
HSP 1 Score: 122.1 bits (305), Expect = 7.3e-28
Identity = 86/232 (37.07%), Postives = 125/232 (53.88%), Query Frame = 0
Query: 40 HQNLRYLRSLHIIDSRTRF--HSP---DAVEQILSTVHFLKSK--GFSDSDFPRLAFLCP 99
H+ L YL SL ID T H P A+ + S V ++ + F+ DF RL +CP
Sbjct: 74 HEKLIYLDSLG-IDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCP 133
Query: 100 QLFTPNFDPTDIASIFHFLNADLSASVQESRGLILRCPRILFSDVELCLRPTHRFLKQLG 159
+L T I I L S+ + R + R PR+L V+ LRPT FL+++G
Sbjct: 134 ELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIG 193
Query: 160 IENLKSPSNLNSHLLNTRVE-KLRSKIRFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLR 219
I + + +++LL+ V+ KL +I + +++GFS+ A + R P +F YS+ EN
Sbjct: 194 ILD----PHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYE 253
Query: 220 PKYEYLVKEMERDLEELKGFPQYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
PK +YL+ EM RD+ E+ FPQYF FSLE RI PRH + +R PL ML
Sbjct: 254 PKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVML 300
BLAST of CcUC02G022990 vs. TAIR 10
Match:
AT2G36000.2 (Mitochondrial transcription termination factor family protein )
HSP 1 Score: 122.1 bits (305), Expect = 7.3e-28
Identity = 86/232 (37.07%), Postives = 125/232 (53.88%), Query Frame = 0
Query: 40 HQNLRYLRSLHIIDSRTRF--HSP---DAVEQILSTVHFLKSK--GFSDSDFPRLAFLCP 99
H+ L YL SL ID T H P A+ + S V ++ + F+ DF RL +CP
Sbjct: 74 HEKLIYLDSLG-IDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCP 133
Query: 100 QLFTPNFDPTDIASIFHFLNADLSASVQESRGLILRCPRILFSDVELCLRPTHRFLKQLG 159
+L T I I L S+ + R + R PR+L V+ LRPT FL+++G
Sbjct: 134 ELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIG 193
Query: 160 IENLKSPSNLNSHLLNTRVE-KLRSKIRFLKEIGFSQEEAAKVCGRMPAIFGYSVEENLR 219
I + + +++LL+ V+ KL +I + +++GFS+ A + R P +F YS+ EN
Sbjct: 194 ILD----PHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYE 253
Query: 220 PKYEYLVKEMERDLEELKGFPQYFGFSLEGRIMPRHLHLKQRNLRIPLNRML 264
PK +YL+ EM RD+ E+ FPQYF FSLE RI PRH + +R PL ML
Sbjct: 254 PKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVML 300
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038887809.1 | 9.0e-129 | 89.02 | transcription termination factor MTEF1, chloroplastic [Benincasa hispida] | [more] |
XP_008454873.1 | 1.3e-114 | 81.18 | PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo] ... | [more] |
XP_011658929.1 | 6.9e-113 | 78.97 | transcription termination factor MTEF1, chloroplastic [Cucumis sativus] >KGN4398... | [more] |
KAG7022425.1 | 1.4e-110 | 78.87 | Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyro... | [more] |
XP_022931610.1 | 2.5e-110 | 78.87 | transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q84X53 | 4.3e-33 | 39.13 | Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... | [more] |
F4JVI3 | 1.2e-14 | 27.10 | Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... | [more] |
F4IHL3 | 3.2e-12 | 28.09 | Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... | [more] |
Q9FM80 | 1.2e-11 | 25.87 | Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... | [more] |
Q9SZL6 | 3.6e-11 | 26.34 | Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3C479 | 6.1e-115 | 81.18 | Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A1S3BZK0 | 6.1e-115 | 81.18 | transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN... | [more] |
A0A0A0K870 | 3.4e-113 | 78.97 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075660 PE=3 SV=1 | [more] |
A0A6J1EZY9 | 1.2e-110 | 78.87 | transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3... | [more] |
A0A6J1JEA2 | 1.3e-109 | 77.32 | transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366... | [more] |
Match Name | E-value | Identity | Description | |
AT3G18870.1 | 4.4e-81 | 59.68 | Mitochondrial transcription termination factor family protein | [more] |
AT2G34620.1 | 3.2e-39 | 42.86 | Mitochondrial transcription termination factor family protein | [more] |
AT2G03050.1 | 3.1e-34 | 39.13 | Mitochondrial transcription termination factor family protein | [more] |
AT2G36000.1 | 7.3e-28 | 37.07 | Mitochondrial transcription termination factor family protein | [more] |
AT2G36000.2 | 7.3e-28 | 37.07 | Mitochondrial transcription termination factor family protein | [more] |