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CcUC02G022320 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGTTTCTTTTAGCTTCAGGGAAGCCGAACCAAGAAGCAAGCAAAAATGGGGGCTTCGATAATCTCCTCTCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTTTCTCCACCTTCTTCTCTAAACCCCCCGCCTCCGCCACCGCCGCCGCCGCCATCTCCACCGTTTGCTTCCATCAATTTAAGCCCAACAGTTCAAACTTCCTCACTCGCGAATCTCCTCACCATTCCCGGTCTTTCACTCGCTCCGCATCCCTTTCCTTCACTCGCTCCTTTTCCTTCACCATTTCCGTCCCCTCCGAGGTCAGATTTGACGAAGACGACGATGGAATTGAAGATGAAGATGAAAGCGATTACGAAGATGAAGGTGAAATCGAAGATTTTGAAAGGGACGAGGCCGTTGGGAGTGGAACGGAAACTGGTGTGGCTTCGGAGTTGTCTTCGTCAATGGCGAGTAGAAATGAAGTGAAGGATATTCCGGGCTTGACAATTAAGGAGAAAAAAGAGCTGGCATCGTATGCTCATAGTTTAGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGGTTTGTTGGTTCTTTCAACGTTCACTTCTCTGTTTGATTGAGTTCTGATACTATCCATTAAGTCTATATGGCTTTAGGATTAGGGTTTATAAAGCAACCATTGCTGTGGACATCAATTGTCTTTGCAAAATTGTCGCCTCTGCTTCTTGTAGAATTTGAATAGCAAGAACATTCTGGATATAAATTGCTTGTATAATCGTATGTAGTTAGGAGGACAGCAATTACATTGGTTCTTGGAAAAAAGAAATTTGTCTGTTGGAAAGTAAATTTCAATTTCTATTATAGAATATGATTGATTAACTGCTAGGGAATAAAAAATGTTTGTATTTAGAACTGACTTCCATCATATGATTCATTGATCATGCATTGAATTTGTTGATAGATAAGGAAGGGTTCTTTCCATTAATTTTGAGGTCCAAGTTTATCAGTGAAGGGAGAATCTTAGAAGTCATATGGTTAAGCATTTGCACTATATATAATTCTCTTCCCTTACGTTGTAAGCTTACAAAAGCTTATGTTACAACCTTACTTGAACAGGATCTGTTCTACCGTGTCCTTGAGTTCTAAAAAAGCTTAACTTTGTCTTCTTGCACTTCATTCATTTTAAGTACCTCGAATTTATATTTAATGATTATTAGGGGCATGCTAATCCATGTTGTTATGAAGCAGCTACATTAAGTGTTTAACCTAAATACCGACGTTTCTTGTTGGTTGAGTTTTCTTTTTAGTTATTCTCTAGGCTTATTTTGATTGATTGAAGCCCTTTCTTAGTTTTAGTTTGGCTCCCTTCGTGCATGAGTTTATTTACACCCTTTCTGTTCTTTATTCTTTCATTTTTTCTCAGCAAGGGTTCTCATTGGAAAAAAGTGATATTTTGGGTTGATTGCTTTTGTTTATGAAGAGATATATAGCATCTGGAACTCAATTGCGATTCCTCTCTGTAAACTTGACTAGTGACTTCATTTCTTTGTTCTTTCTCATTTAAATGTTGAATATTAGAAACTCCTTGGAACAAACTAGATTAAAAGAAAATTGAACCACTCGATACAGATCAAAATTCTTGGAAACTGTCCAGAGGAGCTGGAGGATGCGGTGAGGAAATTGGAGGAATCAACTGGTTCTGTGGTGGTGAATCAAATTGGCAGGACTGTTATTATTTACAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAGAAACGACGAGCCCGAAAAATTTATGTGAGAAAAGAGCCTGATCGAGTCAAATCCATTTTGCAGGTAAAGTAAATGCATAATGCATTGGCATTCTTGATCATTTCTCCAACATGTTTAGTATTCTATTGCAAGTTTCCTCTTAAATTTGAATACTTGTATAACTGCAGAATAAAATACAAACACCCCGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTATTGATCTGAAATAGGATTCACATCTTGCAGGTTTATGTTGGAGGAACAGATTTTGAATTTTCATCCCAATGTAAGTTTTGTTCATACCATTCTTGTTCTTGTAGTTCCACTAGTTTTGATTTAATTCATTAATGTAGAGATTTTTACTCTGCTTACACTTCACAGGTTTAGAGATTAAACAAGATTATAGGTTGTTTGACAAGAGTTAGTAGGAGGAGCTCAAACTCTACTTCCGTGTATCTCATGTTTTGTTGTTTGCTTTCTACTCATGCTTTTGAAACTTAAGCC CAAGTTTCTTTTAGCTTCAGGGAAGCCGAACCAAGAAGCAAGCAAAAATGGGGGCTTCGATAATCTCCTCTCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTTTCTCCACCTTCTTCTCTAAACCCCCCGCCTCCGCCACCGCCGCCGCCGCCATCTCCACCGTTTGCTTCCATCAATTTAAGCCCAACAGTTCAAACTTCCTCACTCGCGAATCTCCTCACCATTCCCGGTCTTTCACTCGCTCCGCATCCCTTTCCTTCACTCGCTCCTTTTCCTTCACCATTTCCGTCCCCTCCGAGGTCAGATTTGACGAAGACGACGATGGAATTGAAGATGAAGATGAAAGCGATTACGAAGATGAAGGTGAAATCGAAGATTTTGAAAGGGACGAGGCCGTTGGGAGTGGAACGGAAACTGGTGTGGCTTCGGAGTTGTCTTCGTCAATGGCGAGTAGAAATGAAGTGAAGGATATTCCGGGCTTGACAATTAAGGAGAAAAAAGAGCTGGCATCGTATGCTCATAGTTTAGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTTGGAAACTGTCCAGAGGAGCTGGAGGATGCGGTGAGGAAATTGGAGGAATCAACTGGTTCTGTGGTGGTGAATCAAATTGGCAGGACTGTTATTATTTACAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAGAAACGACGAGCCCGAAAAATTTATGTGAGAAAAGAGCCTGATCGAGTCAAATCCATTTTGCAGGTAAAAATAAAATACAAACACCCCGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTATTGATCTGAAATAGGATTCACATCTTGCAGGTTTATGTTGGAGGAACAGATTTTGAATTTTCATCCCAATGTTTAGAGATTAAACAAGATTATAGGTTGTTTGACAAGAGTTAGTAGGAGGAGCTCAAACTCTACTTCCGTGTATCTCATGTTTTGTTGTTTGCTTTCTACTCATGCTTTTGAAACTTAAGCC ATGGGGGCTTCGATAATCTCCTCTCACTCTCTTCTTCTCCGGTCAGTTCCTTCTTCTTTCTCCACCTTCTTCTCTAAACCCCCCGCCTCCGCCACCGCCGCCGCCGCCATCTCCACCGTTTGCTTCCATCAATTTAAGCCCAACAGTTCAAACTTCCTCACTCGCGAATCTCCTCACCATTCCCGGTCTTTCACTCGCTCCGCATCCCTTTCCTTCACTCGCTCCTTTTCCTTCACCATTTCCGTCCCCTCCGAGGTCAGATTTGACGAAGACGACGATGGAATTGAAGATGAAGATGAAAGCGATTACGAAGATGAAGGTGAAATCGAAGATTTTGAAAGGGACGAGGCCGTTGGGAGTGGAACGGAAACTGGTGTGGCTTCGGAGTTGTCTTCGTCAATGGCGAGTAGAAATGAAGTGAAGGATATTCCGGGCTTGACAATTAAGGAGAAAAAAGAGCTGGCATCGTATGCTCATAGTTTAGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTTGGAAACTGTCCAGAGGAGCTGGAGGATGCGGTGAGGAAATTGGAGGAATCAACTGGTTCTGTGGTGGTGAATCAAATTGGCAGGACTGTTATTATTTACAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAGAAACGACGAGCCCGAAAAATTTATGTGAGAAAAGAGCCTGATCGAGTCAAATCCATTTTGCAGGTAAAAATAAAATACAAACACCCCGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTATTGATCTGAAATAG MGASIISSHSLLLRSVPSSFSTFFSKPPASATAAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTRSASLSFTRSFSFTISVPSEVRFDEDDDGIEDEDESDYEDEGEIEDFERDEAVGSGTETGVASELSSSMASRNEVKDIPGLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDAVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVKIKYKHPGARTVVVVEAAGIDLK Homology
BLAST of CcUC02G022320 vs. NCBI nr
Match: XP_004148536.1 (uncharacterized protein LOC101213060 [Cucumis sativus] >KGN43169.1 hypothetical protein Csa_020174 [Cucumis sativus]) HSP 1 Score: 390.6 bits (1002), Expect = 1.2e-104 Identity = 227/270 (84.07%), Postives = 238/270 (88.15%), Query Frame = 0
BLAST of CcUC02G022320 vs. NCBI nr
Match: XP_038888218.1 (uncharacterized protein LOC120078082 [Benincasa hispida]) HSP 1 Score: 388.7 bits (997), Expect = 4.5e-104 Identity = 229/270 (84.81%), Postives = 239/270 (88.52%), Query Frame = 0
BLAST of CcUC02G022320 vs. NCBI nr
Match: XP_008448058.1 (PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]) HSP 1 Score: 384.4 bits (986), Expect = 8.5e-103 Identity = 221/274 (80.66%), Postives = 238/274 (86.86%), Query Frame = 0
BLAST of CcUC02G022320 vs. NCBI nr
Match: KAG7022267.1 (yqeI [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 375.9 bits (964), Expect = 3.0e-100 Identity = 223/296 (75.34%), Postives = 244/296 (82.43%), Query Frame = 0
BLAST of CcUC02G022320 vs. NCBI nr
Match: XP_022971306.1 (uncharacterized protein LOC111470060 [Cucurbita maxima]) HSP 1 Score: 345.9 bits (886), Expect = 3.4e-91 Identity = 206/276 (74.64%), Postives = 226/276 (81.88%), Query Frame = 0
BLAST of CcUC02G022320 vs. ExPASy Swiss-Prot
Match: P54454 (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.8e-08 Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of CcUC02G022320 vs. ExPASy Swiss-Prot
Match: P0AGK6 (RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05 Identity = 30/89 (33.71%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of CcUC02G022320 vs. ExPASy Swiss-Prot
Match: P0AGK5 (RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yhbY PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05 Identity = 30/89 (33.71%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of CcUC02G022320 vs. ExPASy Swiss-Prot
Match: P0AGK4 (RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05 Identity = 30/89 (33.71%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of CcUC02G022320 vs. ExPASy Swiss-Prot
Match: P71376 (RNA-binding protein HI_1333 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1333 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 9.4e-04 Identity = 26/89 (29.21%), Postives = 46/89 (51.69%), Query Frame = 0
BLAST of CcUC02G022320 vs. ExPASy TrEMBL
Match: A0A0A0K2C3 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 5.8e-105 Identity = 227/270 (84.07%), Postives = 238/270 (88.15%), Query Frame = 0
BLAST of CcUC02G022320 vs. ExPASy TrEMBL
Match: A0A1S3BJF7 (uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 4.1e-103 Identity = 221/274 (80.66%), Postives = 238/274 (86.86%), Query Frame = 0
BLAST of CcUC02G022320 vs. ExPASy TrEMBL
Match: A0A6J1I2Z3 (uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.6e-91 Identity = 206/276 (74.64%), Postives = 226/276 (81.88%), Query Frame = 0
BLAST of CcUC02G022320 vs. ExPASy TrEMBL
Match: A0A5D3DFJ1 (Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00840 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 4.2e-63 Identity = 133/146 (91.10%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of CcUC02G022320 vs. ExPASy TrEMBL
Match: A0A6J1C409 (uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007723 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 4.0e-58 Identity = 128/170 (75.29%), Postives = 151/170 (88.82%), Query Frame = 0
BLAST of CcUC02G022320 vs. TAIR 10
Match: AT4G39040.1 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 145.6 bits (366), Expect = 6.2e-35 Identity = 116/261 (44.44%), Postives = 150/261 (57.47%), Query Frame = 0
BLAST of CcUC02G022320 vs. TAIR 10
Match: AT4G39040.2 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 145.6 bits (366), Expect = 6.2e-35 Identity = 116/261 (44.44%), Postives = 150/261 (57.47%), Query Frame = 0
BLAST of CcUC02G022320 vs. TAIR 10
Match: AT2G21350.1 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 132.5 bits (332), Expect = 5.4e-31 Identity = 103/212 (48.58%), Postives = 128/212 (60.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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