CcUC02G021910 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGACTTCGTCGTCTTCTAAGGCGGTCTTCAATGACAGGAAACCAGAGAGGTTCCGTGGTTCCTAAGGGTTATTGTGCAGTCTATGTTGGAGAGAACCAAAAGAAACGGTTCGTGATTCCGGTTACTTACTTGAATCAACCATGTTTTCAAGACTTGTTTAGTCAAGCTACTGAAGAATTTGAATATTATCATCCAATGGGTGGTCTAACATTTCACTGCAGAGATGATATCTTTGCTAATATGATCCCTCACTTGAATGAACAATGA ATGGGACTTCGTCGTCTTCTAAGGCGGTCTTCAATGACAGGAAACCAGAGAGGTTCCGTGGTTCCTAAGGGTTATTGTGCAGTCTATGTTGGAGAGAACCAAAAGAAACGGTTCGTGATTCCGGTTACTTACTTGAATCAACCATGTTTTCAAGACTTGTTTAGTCAAGCTACTGAAGAATTTGAATATTATCATCCAATGGGTGGTCTAACATTTCACTGCAGAGATGATATCTTTGCTAATATGATCCCTCACTTGAATGAACAATGA ATGGGACTTCGTCGTCTTCTAAGGCGGTCTTCAATGACAGGAAACCAGAGAGGTTCCGTGGTTCCTAAGGGTTATTGTGCAGTCTATGTTGGAGAGAACCAAAAGAAACGGTTCGTGATTCCGGTTACTTACTTGAATCAACCATGTTTTCAAGACTTGTTTAGTCAAGCTACTGAAGAATTTGAATATTATCATCCAATGGGTGGTCTAACATTTCACTGCAGAGATGATATCTTTGCTAATATGATCCCTCACTTGAATGAACAATGA MGLRRLLRRSSMTGNQRGSVVPKGYCAVYVGENQKKRFVIPVTYLNQPCFQDLFSQATEEFEYYHPMGGLTFHCRDDIFANMIPHLNEQ Homology
BLAST of CcUC02G021910 vs. NCBI nr
Match: KAE8645661.1 (hypothetical protein Csa_020412 [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 2.7e-31 Identity = 63/74 (85.14%), Postives = 69/74 (93.24%), Query Frame = 0
BLAST of CcUC02G021910 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia]) HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28 Identity = 63/88 (71.59%), Postives = 72/88 (81.82%), Query Frame = 0
BLAST of CcUC02G021910 vs. NCBI nr
Match: KAG6572089.1 (Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 133.7 bits (335), Expect = 8.1e-28 Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of CcUC02G021910 vs. NCBI nr
Match: KGN43209.1 (hypothetical protein Csa_020258 [Cucumis sativus]) HSP 1 Score: 131.0 bits (328), Expect = 5.2e-27 Identity = 61/87 (70.11%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of CcUC02G021910 vs. NCBI nr
Match: XP_016900447.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0049702.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa] >TYK12170.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]) HSP 1 Score: 128.6 bits (322), Expect = 2.6e-26 Identity = 63/87 (72.41%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of CcUC02G021910 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 6.5e-20 Identity = 47/85 (55.29%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of CcUC02G021910 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-19 Identity = 51/93 (54.84%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of CcUC02G021910 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.4e-19 Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of CcUC02G021910 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 3.2e-19 Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 0
BLAST of CcUC02G021910 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 5.5e-19 Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 0
BLAST of CcUC02G021910 vs. ExPASy TrEMBL
Match: A0A0A0K5V1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 9.9e-40 Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of CcUC02G021910 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28 Identity = 63/88 (71.59%), Postives = 72/88 (81.82%), Query Frame = 0
BLAST of CcUC02G021910 vs. ExPASy TrEMBL
Match: A0A0A0K2F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009050 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.5e-27 Identity = 61/87 (70.11%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of CcUC02G021910 vs. ExPASy TrEMBL
Match: A0A5D3CL76 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001100 PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.3e-26 Identity = 63/87 (72.41%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of CcUC02G021910 vs. ExPASy TrEMBL
Match: A0A1S4DWU0 (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC107990908 PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.3e-26 Identity = 63/87 (72.41%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of CcUC02G021910 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 96.7 bits (239), Expect = 1.0e-20 Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of CcUC02G021910 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 94.7 bits (234), Expect = 3.9e-20 Identity = 43/86 (50.00%), Postives = 61/86 (70.93%), Query Frame = 0
BLAST of CcUC02G021910 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 94.0 bits (232), Expect = 6.6e-20 Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of CcUC02G021910 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 92.8 bits (229), Expect = 1.5e-19 Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of CcUC02G021910 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 92.4 bits (228), Expect = 1.9e-19 Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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