CcUC02G021330 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G021330
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCicolChr02: 3834381 .. 3836408 (+)
RNA-Seq ExpressionCcUC02G021330
SyntenyCcUC02G021330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAATTTGGTGATGATTCGCCGGAGAATTTGGTCTCCGGAGATCTTTCGTGCAGCTGCTTTAACAATCTTCAATGCTCAGCAGCATCTTCATCGTCGTCCAATTCAGTTCGACAATGCTTTTCAGTTGAAACAGAGATGTTTCTCTTCTTCCTCGAGAGCCAACAGTTTTCAGGTTCCGAAATTCCATTCTCTGAACAAGAAGATGTCTAATTTGATTCAAGCAGGCCGAATAATTGAAGCGAGGGAACTGTTCGATGGCATTGAGCATCGGAATACGATCACTTGGAATACGATGATCGCTGGTTATGTAAAAAGGAGAGAGATGTCGAAAGCACGCCAGTTGTTCGACGAAATGCCTAACAGAAGCACTGTGTCATGGAACTTAATGTTATCAGGTTATATATCTTGTGGTGGAAGGTACCTTGAGAGGGGACGGAATATGTTCGATGAAATGCCAGAAAGAGATTGTGTTTCATGGAACACGATGTTGAGTGGGTATGCTAAGAATGGGATGATGGATAAAGCAGAAGAGCTTTTCAATTACATGCCTGAGCGTAATATTGTCTCGTGGAATGCGATGGTTTCTGGTTATTTAATGAATGGTTATGTGGAGAAAGCTGTTGAGTTCTTTAAGATGATGCCAGAACGAGACTCTGCTTCTCTTAGTGCACTGGTTTCTGGTCTGATTCAGAATGACAAGTTGGTTGAAGCCGAAAGGATTCTGCTTCAATATGGTGGGAATGATGGTAGAGGGGATTTAGTTCATGCTTATAATACTTTGATCGCTGGATATGGTCAGAAAGGAATGACCCATGAAGCCCGGAAATTGTTTGATCGCATCCCTTTGGGTCGTGATGGAAAGGAAGATGAATGTGGAAACTCTGGGAGGAATGTGGTTTCATGGAACTCTATGATAATGAGCTATGTGAGAGCTGGTGACATAGTCTCTGCTCGAGAACTATTCGATAAAATGGTTGAGCGAGATACTTTCTCATGGAACACTATGATCAGTGGCTATGTTCAGATCTTGGATATGAAAGAGGCTTCAAATCTTTTCGGTAGAATGCCGGAACCTGATACCCTTTCTTGGAATATGATGATATCTGGGTTTGCTGAGATAGGTAATTTGAAACTAGCTCATGACTTGTTCAAGAGGATGCCAGCGAAAAGCCTTGTCTCATGGAATTCCATGATATCTAGCTGTGAGAAAAATGAAGACTATAAAGGAGCAATTAACATCTTTTTGCAGATGCAACTTGAAGGTAGAAAACCAGATAGGCACACTTTATCATCAATTCTAAGTGCTTGTGCTGGATTGGTAGATCTGGCTTCGGGAACTCAGATTCATCAACTAGTTACAAAAGCCTTTATTCCAGATTTGCCCGTAAACAACTCTCTTGTTACAATGTATTCAAGATGTGGAGCAATCGTCGAGGCACGGACCATTTTTGATGAAATGAAACTGCAGAGAGATGTCATTTCTTGGAATGCAATGATTGGCGGGTATGCCTCTCATGGCTTTGCAACAGAGGCTCTTCAACTTTTTGAATTGATGAAACAATGCAATGTGCAGCCCACTTATATCACATTCATTTCCGTTCTGAATGCTTGTGCTCATGCTGGATTGATTGAGGAAGGTAGGAGAGAATTCAACTCCATGGTTAACACGCACGGTATCAAGCCACGAGTCGAACACTATGCTGCCCTCGTCGACATCATTGGCCGAAATGGCCAACTTGAAGAAGCAGTGAGTTTGATCAATAGCATGCCATGTGAACCAGATAAAGCAGTATGGGGTGCATTACTGGGTGCTTGTAGGATACACAACAATGTTGAGATGGCTCGAGCAGTGGCAGAAGTGTTAATGAAGCTCGAACCTGAAAGCTCAGCTCCTTTCGTGCTGCTGTATAATATGTATGCTGAAGTGGGACGATGGGATGATGCTGCCGAAGTGAGAACGATGATGGAGAAGAACAATGTTCAAAAGGAAGCTGGATATAGTCGGGTGGATTCTTATTGCTAA

mRNA sequence

ATGCCCAATTTGGTGATGATTCGCCGGAGAATTTGGTCTCCGGAGATCTTTCGTGCAGCTGCTTTAACAATCTTCAATGCTCAGCAGCATCTTCATCGTCGTCCAATTCAGTTCGACAATGCTTTTCAGTTGAAACAGAGATGTTTCTCTTCTTCCTCGAGAGCCAACAGTTTTCAGGTTCCGAAATTCCATTCTCTGAACAAGAAGATGTCTAATTTGATTCAAGCAGGCCGAATAATTGAAGCGAGGGAACTGTTCGATGGCATTGAGCATCGGAATACGATCACTTGGAATACGATGATCGCTGGTTATGTAAAAAGGAGAGAGATGTCGAAAGCACGCCAGTTGTTCGACGAAATGCCTAACAGAAGCACTGTGTCATGGAACTTAATGTTATCAGGTTATATATCTTGTGGTGGAAGGTACCTTGAGAGGGGACGGAATATGTTCGATGAAATGCCAGAAAGAGATTGTGTTTCATGGAACACGATGTTGAGTGGGTATGCTAAGAATGGGATGATGGATAAAGCAGAAGAGCTTTTCAATTACATGCCTGAGCGTAATATTGTCTCGTGGAATGCGATGGTTTCTGGTTATTTAATGAATGGTTATGTGGAGAAAGCTGTTGAGTTCTTTAAGATGATGCCAGAACGAGACTCTGCTTCTCTTAGTGCACTGGTTTCTGGTCTGATTCAGAATGACAAGTTGGTTGAAGCCGAAAGGATTCTGCTTCAATATGGTGGGAATGATGGTAGAGGGGATTTAGTTCATGCTTATAATACTTTGATCGCTGGATATGGTCAGAAAGGAATGACCCATGAAGCCCGGAAATTGTTTGATCGCATCCCTTTGGGTCGTGATGGAAAGGAAGATGAATGTGGAAACTCTGGGAGGAATGTGGTTTCATGGAACTCTATGATAATGAGCTATGTGAGAGCTGGTGACATAGTCTCTGCTCGAGAACTATTCGATAAAATGGTTGAGCGAGATACTTTCTCATGGAACACTATGATCAGTGGCTATGTTCAGATCTTGGATATGAAAGAGGCTTCAAATCTTTTCGGTAGAATGCCGGAACCTGATACCCTTTCTTGGAATATGATGATATCTGGGTTTGCTGAGATAGGTAATTTGAAACTAGCTCATGACTTGTTCAAGAGGATGCCAGCGAAAAGCCTTGTCTCATGGAATTCCATGATATCTAGCTGTGAGAAAAATGAAGACTATAAAGGAGCAATTAACATCTTTTTGCAGATGCAACTTGAAGGTAGAAAACCAGATAGGCACACTTTATCATCAATTCTAAGTGCTTGTGCTGGATTGGTAGATCTGGCTTCGGGAACTCAGATTCATCAACTAGTTACAAAAGCCTTTATTCCAGATTTGCCCGTAAACAACTCTCTTGTTACAATGTATTCAAGATGTGGAGCAATCGTCGAGGCACGGACCATTTTTGATGAAATGAAACTGCAGAGAGATGTCATTTCTTGGAATGCAATGATTGGCGGGTATGCCTCTCATGGCTTTGCAACAGAGGCTCTTCAACTTTTTGAATTGATGAAACAATGCAATGTGCAGCCCACTTATATCACATTCATTTCCGTTCTGAATGCTTGTGCTCATGCTGGATTGATTGAGGAAGGTAGGAGAGAATTCAACTCCATGGTTAACACGCACGGTATCAAGCCACGAGTCGAACACTATGCTGCCCTCGTCGACATCATTGGCCGAAATGGCCAACTTGAAGAAGCAGTGAGTTTGATCAATAGCATGCCATGTGAACCAGATAAAGCAGTATGGGGTGCATTACTGGGTGCTTGTAGGATACACAACAATGTTGAGATGGCTCGAGCAGTGGCAGAAGTGTTAATGAAGCTCGAACCTGAAAGCTCAGCTCCTTTCGTGCTGCTGTATAATATGTATGCTGAAGTGGGACGATGGGATGATGCTGCCGAAGTGAGAACGATGATGGAGAAGAACAATGTTCAAAAGGAAGCTGGATATAGTCGGGTGGATTCTTATTGCTAA

Coding sequence (CDS)

ATGCCCAATTTGGTGATGATTCGCCGGAGAATTTGGTCTCCGGAGATCTTTCGTGCAGCTGCTTTAACAATCTTCAATGCTCAGCAGCATCTTCATCGTCGTCCAATTCAGTTCGACAATGCTTTTCAGTTGAAACAGAGATGTTTCTCTTCTTCCTCGAGAGCCAACAGTTTTCAGGTTCCGAAATTCCATTCTCTGAACAAGAAGATGTCTAATTTGATTCAAGCAGGCCGAATAATTGAAGCGAGGGAACTGTTCGATGGCATTGAGCATCGGAATACGATCACTTGGAATACGATGATCGCTGGTTATGTAAAAAGGAGAGAGATGTCGAAAGCACGCCAGTTGTTCGACGAAATGCCTAACAGAAGCACTGTGTCATGGAACTTAATGTTATCAGGTTATATATCTTGTGGTGGAAGGTACCTTGAGAGGGGACGGAATATGTTCGATGAAATGCCAGAAAGAGATTGTGTTTCATGGAACACGATGTTGAGTGGGTATGCTAAGAATGGGATGATGGATAAAGCAGAAGAGCTTTTCAATTACATGCCTGAGCGTAATATTGTCTCGTGGAATGCGATGGTTTCTGGTTATTTAATGAATGGTTATGTGGAGAAAGCTGTTGAGTTCTTTAAGATGATGCCAGAACGAGACTCTGCTTCTCTTAGTGCACTGGTTTCTGGTCTGATTCAGAATGACAAGTTGGTTGAAGCCGAAAGGATTCTGCTTCAATATGGTGGGAATGATGGTAGAGGGGATTTAGTTCATGCTTATAATACTTTGATCGCTGGATATGGTCAGAAAGGAATGACCCATGAAGCCCGGAAATTGTTTGATCGCATCCCTTTGGGTCGTGATGGAAAGGAAGATGAATGTGGAAACTCTGGGAGGAATGTGGTTTCATGGAACTCTATGATAATGAGCTATGTGAGAGCTGGTGACATAGTCTCTGCTCGAGAACTATTCGATAAAATGGTTGAGCGAGATACTTTCTCATGGAACACTATGATCAGTGGCTATGTTCAGATCTTGGATATGAAAGAGGCTTCAAATCTTTTCGGTAGAATGCCGGAACCTGATACCCTTTCTTGGAATATGATGATATCTGGGTTTGCTGAGATAGGTAATTTGAAACTAGCTCATGACTTGTTCAAGAGGATGCCAGCGAAAAGCCTTGTCTCATGGAATTCCATGATATCTAGCTGTGAGAAAAATGAAGACTATAAAGGAGCAATTAACATCTTTTTGCAGATGCAACTTGAAGGTAGAAAACCAGATAGGCACACTTTATCATCAATTCTAAGTGCTTGTGCTGGATTGGTAGATCTGGCTTCGGGAACTCAGATTCATCAACTAGTTACAAAAGCCTTTATTCCAGATTTGCCCGTAAACAACTCTCTTGTTACAATGTATTCAAGATGTGGAGCAATCGTCGAGGCACGGACCATTTTTGATGAAATGAAACTGCAGAGAGATGTCATTTCTTGGAATGCAATGATTGGCGGGTATGCCTCTCATGGCTTTGCAACAGAGGCTCTTCAACTTTTTGAATTGATGAAACAATGCAATGTGCAGCCCACTTATATCACATTCATTTCCGTTCTGAATGCTTGTGCTCATGCTGGATTGATTGAGGAAGGTAGGAGAGAATTCAACTCCATGGTTAACACGCACGGTATCAAGCCACGAGTCGAACACTATGCTGCCCTCGTCGACATCATTGGCCGAAATGGCCAACTTGAAGAAGCAGTGAGTTTGATCAATAGCATGCCATGTGAACCAGATAAAGCAGTATGGGGTGCATTACTGGGTGCTTGTAGGATACACAACAATGTTGAGATGGCTCGAGCAGTGGCAGAAGTGTTAATGAAGCTCGAACCTGAAAGCTCAGCTCCTTTCGTGCTGCTGTATAATATGTATGCTGAAGTGGGACGATGGGATGATGCTGCCGAAGTGAGAACGATGATGGAGAAGAACAATGTTCAAAAGGAAGCTGGATATAGTCGGGTGGATTCTTATTGCTAA

Protein sequence

MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQVPKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEMPNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEELFNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAERILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNVVSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEPDTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQLEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVEARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVWGALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKNNVQKEAGYSRVDSYC
Homology
[Close]
BLAST of CcUC02G021330 vs. NCBI nr
Match: XP_038886946.1 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Benincasa hispida])

HSP 1 Score: 1229.2 bits (3179), Expect = 0.0e+00
Identity = 597/675 (88.44%), Postives = 630/675 (93.33%), Query Frame = 0 

Query: 1   MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQV 60
           MPNLVMIRR IWS + FRAAALTIFN QQHLHRRP+ F+ A QL Q CFS S+RANSFQV
Sbjct: 1   MPNLVMIRRSIWSTKTFRAAALTIFNPQQHLHRRPVIFNIACQLNQTCFSFSARANSFQV 60

Query: 61  PKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEM 120
           P+F+ LNKK+S LI+ GRI EARELFD I+HRNTITWNTMI GYVKRREM KA QLFDEM
Sbjct: 61  PEFYFLNKKISYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMLKALQLFDEM 120

Query: 121 PNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEEL 180
           PNR  VSWNLMLSGYISCGG+++ER RNMFD+MPERDCVSWNTMLSGYAKN MMDKAEE+
Sbjct: 121 PNRDIVSWNLMLSGYISCGGKFIERARNMFDKMPERDCVSWNTMLSGYAKNRMMDKAEEI 180

Query: 181 FNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAE 240
           FNYMPERN+V+WNAMVSGYLMNGYV+KAVEFFKMMPERDSASLS LVSGLIQNDKLVEAE
Sbjct: 181 FNYMPERNVVTWNAMVSGYLMNGYVKKAVEFFKMMPERDSASLSVLVSGLIQNDKLVEAE 240

Query: 241 RILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNV 300
           +ILLQYGGNDG+GDLVHAYNTLIAGYGQKGMTHEARKLFDRIP GRD +EDECGN  RNV
Sbjct: 241 KILLQYGGNDGKGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPSGRDHEEDECGNFRRNV 300

Query: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEP 360
           VSWNSMIMSYVRAGDIVSARELFD+MVERDTFSWNTMISGYVQILDMKEASNLFGRM EP
Sbjct: 301 VSWNSMIMSYVRAGDIVSARELFDRMVERDTFSWNTMISGYVQILDMKEASNLFGRMLEP 360

Query: 361 DTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQ 420
           DTLSWNMMISGFAEIGNLKLAHDLF RMP KSLVSWNSMIS CEKNEDYKGAINIFLQMQ
Sbjct: 361 DTLSWNMMISGFAEIGNLKLAHDLFMRMPEKSLVSWNSMISGCEKNEDYKGAINIFLQMQ 420

Query: 421 LEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVE 480
            EG+KPDRHTLSSILSACAGLVDLA GTQIHQLV KAFI DLP+NNSLVTMYSRCGAIVE
Sbjct: 421 HEGKKPDRHTLSSILSACAGLVDLALGTQIHQLVIKAFIADLPINNSLVTMYSRCGAIVE 480

Query: 481 ARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACA 540
           ART+F EM LQRDVISWNAMIGGYASHGFA EAL+LFELMKQCNVQPTYITFISVLNACA
Sbjct: 481 ARTVFYEMNLQRDVISWNAMIGGYASHGFAAEALKLFELMKQCNVQPTYITFISVLNACA 540

Query: 541 HAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVW 600
           HAGLIEEGRREFNSMVNTH I+PRVEHYAALVDII R+GQLEEA+SLINSMPCEPDK VW
Sbjct: 541 HAGLIEEGRREFNSMVNTHSIEPRVEHYAALVDIISRHGQLEEAMSLINSMPCEPDKTVW 600

Query: 601 GALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKN 660
           GALLGACR+HNNVEMA+A AE LMKLEPESS P+VLLYNMYA+VGRWDDAAEVRTMMEK+
Sbjct: 601 GALLGACRVHNNVEMAQAAAEELMKLEPESSTPYVLLYNMYADVGRWDDAAEVRTMMEKS 660

Query: 661 NVQKEAGYSRVDSYC 676
           NVQKE GYSRVDSYC
Sbjct: 661 NVQKEVGYSRVDSYC 675

[Close]
BLAST of CcUC02G021330 vs. NCBI nr
Match: KAA0040316.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK23390.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1186.8 bits (3069), Expect = 0.0e+00
Identity = 576/675 (85.33%), Postives = 623/675 (92.30%), Query Frame = 0 

Query: 1   MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQV 60
           M NLVM+RRRIWS + F AAALT+FNAQQH  RRP+ F+ AFQ KQ CF SSS+ANSFQV
Sbjct: 1   MSNLVMVRRRIWSTKTFHAAALTVFNAQQHFRRRPVLFNIAFQFKQTCF-SSSKANSFQV 60

Query: 61  PKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEM 120
           P+F+SL+KK+S LI+ GRI EAR LFD I+H NTITWN MI  YVKRREM KARQLFDEM
Sbjct: 61  PEFYSLDKKISYLIRTGRINEARALFDSIKHWNTITWNRMITAYVKRREMLKARQLFDEM 120

Query: 121 PNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEEL 180
           PNR  VSWNLMLSGYISCGG+++ER RNMFDEMPE DCVSWNTMLSGYAK+GMMDKAEEL
Sbjct: 121 PNRDIVSWNLMLSGYISCGGKFIERARNMFDEMPESDCVSWNTMLSGYAKSGMMDKAEEL 180

Query: 181 FNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAE 240
           FN MPERN+VSWNAMVSGYLMNGYVEKA+EFFK+MP+RDSASL ALVSGLIQNDKLVEAE
Sbjct: 181 FNDMPERNVVSWNAMVSGYLMNGYVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAE 240

Query: 241 RILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNV 300
           RIL QYGGNDG+GDLV AYNTLIAGYGQKGM +EARKLFD IP     +ED+CGNS RNV
Sbjct: 241 RILFQYGGNDGKGDLVDAYNTLIAGYGQKGMAYEARKLFDHIPSLCIQEEDDCGNSRRNV 300

Query: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEP 360
           +SWNSMIM YVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLF RMPEP
Sbjct: 301 ISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEP 360

Query: 361 DTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQ 420
           DTLSWNMMISGF+EIG+L+LA DLFK++P KSLVSWNSMIS  EKNEDYKGA+NIFLQMQ
Sbjct: 361 DTLSWNMMISGFSEIGSLELARDLFKKIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 420

Query: 421 LEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVE 480
           LEG+KPDRHTLSSILSACAGLVDLA GTQIHQLVTKAFI DLP+NNSLVTMYSRCGAIVE
Sbjct: 421 LEGKKPDRHTLSSILSACAGLVDLALGTQIHQLVTKAFIADLPINNSLVTMYSRCGAIVE 480

Query: 481 ARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACA 540
           AR +FDEM LQRDVISWNAMIGGYASHGFATEALQLF LMKQCNVQP+YITFISVLNACA
Sbjct: 481 ARMVFDEMNLQRDVISWNAMIGGYASHGFATEALQLFGLMKQCNVQPSYITFISVLNACA 540

Query: 541 HAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVW 600
           HAGL+E+GRREFNSMVN+HGIKP+VEHYAALVDIIGR+GQLEEA+SLINSMPCEPDKAVW
Sbjct: 541 HAGLVEDGRREFNSMVNSHGIKPQVEHYAALVDIIGRHGQLEEALSLINSMPCEPDKAVW 600

Query: 601 GALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKN 660
           GALLGACR+HNNVEMARA AE LMKL+PESSAP+VLL+NMYA+VGRWDDAAE+RTMMEKN
Sbjct: 601 GALLGACRVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEIRTMMEKN 660

Query: 661 NVQKEAGYSRVDSYC 676
           NV K AGYSRVDSYC
Sbjct: 661 NVLKYAGYSRVDSYC 674

[Close]
BLAST of CcUC02G021330 vs. NCBI nr
Match: XP_008447916.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Cucumis melo])

HSP 1 Score: 1186.0 bits (3067), Expect = 0.0e+00
Identity = 576/675 (85.33%), Postives = 623/675 (92.30%), Query Frame = 0 

Query: 1   MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQV 60
           M NLVM+RRRIWS + F AAALT+FNAQQH  RRP+ F+ AFQ KQ CF SSS+ANSFQV
Sbjct: 1   MSNLVMVRRRIWSTKTFHAAALTVFNAQQHFRRRPVLFNIAFQFKQTCF-SSSKANSFQV 60

Query: 61  PKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEM 120
           P+F+SL+KK+S LI+ GRI EAR LFD I+H NTITWN MI  YVKRREM KARQLFDEM
Sbjct: 61  PEFYSLDKKISYLIRTGRINEARALFDSIKHWNTITWNRMITAYVKRREMLKARQLFDEM 120

Query: 121 PNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEEL 180
           PNR  VSWNLMLSGYISCGG+++ER RNMFDEMPE DCVSWNTMLSGYAK+GMMDKAEEL
Sbjct: 121 PNRDIVSWNLMLSGYISCGGKFIERARNMFDEMPESDCVSWNTMLSGYAKSGMMDKAEEL 180

Query: 181 FNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAE 240
           FN MPERN+VSWNAMVSGYLMNGYVEKA+EFFK+MP+RDSASL ALVSGLIQNDKLVEAE
Sbjct: 181 FNDMPERNVVSWNAMVSGYLMNGYVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAE 240

Query: 241 RILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNV 300
           RIL QYGGNDG+GDLV AYNTLIAGYGQKGM +EARKLFD IP     +ED+CGNS RNV
Sbjct: 241 RILFQYGGNDGKGDLVDAYNTLIAGYGQKGMAYEARKLFDHIPSLCIQEEDDCGNSRRNV 300

Query: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEP 360
           +SWNSMIM +VRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLF RMPEP
Sbjct: 301 ISWNSMIMCHVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEP 360

Query: 361 DTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQ 420
           DTLSWNMMISGF+EIG+L+LA DLFKR+P KSLVSWNSMIS  EKNEDYKGA+NIFLQMQ
Sbjct: 361 DTLSWNMMISGFSEIGSLELARDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 420

Query: 421 LEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVE 480
           LEG+KPDRHTLSSILSACAGLVDLA GTQIHQLVTKAFI DLP+NNSLVTMYSRCGAIVE
Sbjct: 421 LEGKKPDRHTLSSILSACAGLVDLALGTQIHQLVTKAFIADLPINNSLVTMYSRCGAIVE 480

Query: 481 ARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACA 540
           AR +FDEM LQRDVISWNAMIGGYASHGFATEALQLF LMKQCNVQP+YITFISVLNACA
Sbjct: 481 ARMVFDEMNLQRDVISWNAMIGGYASHGFATEALQLFGLMKQCNVQPSYITFISVLNACA 540

Query: 541 HAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVW 600
           HAGL+E+GRREFNSMVN+HGIKP+VEHYAALVDIIGR+GQLEEA+SLINSMPCEPDKAVW
Sbjct: 541 HAGLVEDGRREFNSMVNSHGIKPQVEHYAALVDIIGRHGQLEEALSLINSMPCEPDKAVW 600

Query: 601 GALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKN 660
           GALLGACR+HNNVEMARA AE LMKL+PESSAP+VLL+NMYA+VGRWDDAAE+RTMMEKN
Sbjct: 601 GALLGACRVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEIRTMMEKN 660

Query: 661 NVQKEAGYSRVDSYC 676
           NV K AGYSRVDSYC
Sbjct: 661 NVLKYAGYSRVDSYC 674

[Close]
BLAST of CcUC02G021330 vs. NCBI nr
Match: XP_004144924.2 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Cucumis sativus] >KGN43278.1 hypothetical protein Csa_020527 [Cucumis sativus])

HSP 1 Score: 1179.5 bits (3050), Expect = 0.0e+00
Identity = 575/675 (85.19%), Postives = 620/675 (91.85%), Query Frame = 0 

Query: 1   MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQV 60
           M NLVM+ RRIWS + F AAALT+FNAQ   HRRP+ F+  FQ KQ CF SSS+ANSFQV
Sbjct: 1   MSNLVMVCRRIWSTKTFHAAALTVFNAQLQFHRRPVLFNIVFQFKQTCF-SSSKANSFQV 60

Query: 61  PKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEM 120
           P+F+SLNKK+S LI+ GRI EARELFD  EH NTITWN MI  YVKRREM KARQLF+EM
Sbjct: 61  PEFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEM 120

Query: 121 PNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEEL 180
           PNR  VSWNLMLSGYISCGG+++ER RNMFD+MPE DCVSWNTMLSGYAK+GMMDKAEEL
Sbjct: 121 PNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEEL 180

Query: 181 FNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAE 240
           FN MPERN+VSWNAMVSGYLMNG+VEKA+EFFK+MP+RDSASL AL+SGLIQNDKLVEAE
Sbjct: 181 FNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAE 240

Query: 241 RILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNV 300
           RILLQYGGN G+GDLV AYNTLIAGYGQKGM +EARKLFDRIPL  D     CG S RNV
Sbjct: 241 RILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCD-----CGYSRRNV 300

Query: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEP 360
           +SWNSMIM YVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLF RMPEP
Sbjct: 301 ISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEP 360

Query: 361 DTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQ 420
           DTLSWNMMISGF+EIG+LKLAHDLFKR+P KSLVSWNSMIS  EKNEDYKGA+NIFLQMQ
Sbjct: 361 DTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 420

Query: 421 LEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVE 480
           LEG+KPDRHTLSSILSACAGLVDL  GTQIHQLVTKAFI DLP+NNSLVTMYSRCGAIVE
Sbjct: 421 LEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFIADLPINNSLVTMYSRCGAIVE 480

Query: 481 ARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACA 540
           AR +FDEM LQRDVISWNAMIGGYA HGFATEALQLF+LMKQCNVQP+YITFISVLNACA
Sbjct: 481 ARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACA 540

Query: 541 HAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVW 600
           HAGLIEEGRREFNSMVNTHGIKP+VEHYAALVDIIGR+GQLEEA+SLINSMPCEPDKAVW
Sbjct: 541 HAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVW 600

Query: 601 GALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKN 660
           GALLGAC++HNNVEMARA AE LMKL+PESSAP+VLL+NMYA+VGRWDDAAE+RTMMEKN
Sbjct: 601 GALLGACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKN 660

Query: 661 NVQKEAGYSRVDSYC 676
           NVQK+AGYSRVDSYC
Sbjct: 661 NVQKDAGYSRVDSYC 669

[Close]
BLAST of CcUC02G021330 vs. NCBI nr
Match: XP_022928152.1 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 1179.1 bits (3049), Expect = 0.0e+00
Identity = 571/674 (84.72%), Postives = 622/674 (92.28%), Query Frame = 0 

Query: 1   MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQV 60
           MPNLVMIRRRIWS + F  AALTIFNAQ+++ RRP  F+ +FQLKQ CFS      SFQ 
Sbjct: 1   MPNLVMIRRRIWSTKTFHTAALTIFNAQRYVRRRPTTFNISFQLKQSCFS------SFQA 60

Query: 61  PKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEM 120
           P+F+SLNK+MS LI+ G+IIEAR+LFD I+HRNTITWNTMI GYVKRREM+KARQLFDEM
Sbjct: 61  PEFYSLNKRMSYLIRTGQIIEARKLFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEM 120

Query: 121 PNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEEL 180
           P+R  VSWNLMLSGYISCGGRY+E GRN+FD+MP+RDCVSWNTM+SGYAKNGMM++AEEL
Sbjct: 121 PHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEEL 180

Query: 181 FNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAE 240
           F YMPERN+VSWNAMVSGYLMNGYVEKA+EFFKMMPERDSASLSALVSGLIQN+KLVEAE
Sbjct: 181 FKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEAE 240

Query: 241 RILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNV 300
           RILLQYGG+DGRG+LVHAYNTLIAGYGQKGM  EARKLFD IP   + +EDE G+ G+NV
Sbjct: 241 RILLQYGGSDGRGNLVHAYNTLIAGYGQKGMIQEARKLFDCIP---NRQEDENGSFGKNV 300

Query: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEP 360
           VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGY+QILDMKEASNLFGRM  P
Sbjct: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYIQILDMKEASNLFGRMSNP 360

Query: 361 DTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQ 420
           DTLSWNMMISGFAEIGNLKLAHDLF RMP KSLVSWNSMIS  EKNEDYKGAINIFLQMQ
Sbjct: 361 DTLSWNMMISGFAEIGNLKLAHDLFIRMPEKSLVSWNSMISGYEKNEDYKGAINIFLQMQ 420

Query: 421 LEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVE 480
            EG+KPDRHTLSSI+SACAGLVDLA GTQIHQL+TKAFI DLP+NNSLVTMYSRCGAIVE
Sbjct: 421 FEGKKPDRHTLSSIISACAGLVDLALGTQIHQLITKAFIADLPINNSLVTMYSRCGAIVE 480

Query: 481 ARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACA 540
           ART+FDEM LQRDVISWNAMIG YASHGFATEALQLF+LMKQCNVQP+YITFISVLNACA
Sbjct: 481 ARTVFDEMNLQRDVISWNAMIGAYASHGFATEALQLFDLMKQCNVQPSYITFISVLNACA 540

Query: 541 HAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVW 600
           H GLIEEGRREFNSMVN HGI+PRVEHYA LVDIIGR+GQLEEA+SLIN+MPC+PDKAVW
Sbjct: 541 HVGLIEEGRREFNSMVNAHGIEPRVEHYAVLVDIIGRHGQLEEAMSLINNMPCKPDKAVW 600

Query: 601 GALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKN 660
           GALLGACR+HNNVEMAR  AE LMKLEPES+AP+VLLYNMYA+VGRW+DAAEVRT MEKN
Sbjct: 601 GALLGACRVHNNVEMARVAAEALMKLEPESAAPYVLLYNMYADVGRWNDAAEVRTRMEKN 660

Query: 661 NVQKEAGYSRVDSY 675
           N+QKE GYSRVDS+
Sbjct: 661 NIQKETGYSRVDSW 665

[Close]
BLAST of CcUC02G021330 vs. ExPASy Swiss-Prot
Match: O04590 (Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E10 PE=2 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 3.1e-215
Identity = 360/635 (56.69%), Postives = 475/635 (74.80%), Query Frame = 0 

Query: 48  CFSSSSRANSFQVP-----KFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIA 107
           C      ANSF         F + NK+++ +I++G I EAR++F+ +E RNT+TWNTMI+
Sbjct: 20  CLKCLLCANSFSTSVSSSLGFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMIS 79

Query: 108 GYVKRREMSKARQLFDEMPNRSTVSWNLMLSGYISCGG-RYLERGRNMFDEMPERDCVSW 167
           GYVKRREM++AR+LFD MP R  V+WN M+SGY+SCGG R+LE  R +FDEMP RD  SW
Sbjct: 80  GYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSW 139

Query: 168 NTMLSGYAKNGMMDKAEELFNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSA 227
           NTM+SGYAKN  + +A  LF  MPERN VSW+AM++G+  NG V+ AV  F+ MP +DS+
Sbjct: 140 NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSS 199

Query: 228 SLSALVSGLIQNDKLVEAERILLQYGG-NDGRGDLVHAYNTLIAGYGQKGMTHEARKLFD 287
            L ALV+GLI+N++L EA  +L QYG    GR DLV+AYNTLI GYGQ+G    AR LFD
Sbjct: 200 PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFD 259

Query: 288 RIP--LGRDGKEDECGNSGRNVVSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMI 347
           +IP   G D   +      +NVVSWNSMI +Y++ GD+VSAR LFD+M +RDT SWNTMI
Sbjct: 260 QIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMI 319

Query: 348 SGYVQILDMKEASNLFGRMPEPDTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNS 407
            GYV +  M++A  LF  MP  D  SWNMM+SG+A +GN++LA   F++ P K  VSWNS
Sbjct: 320 DGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNS 379

Query: 408 MISSCEKNEDYKGAINIFLQMQLEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAF 467
           +I++ EKN+DYK A+++F++M +EG KPD HTL+S+LSA  GLV+L  G Q+HQ+V K  
Sbjct: 380 IIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV 439

Query: 468 IPDLPVNNSLVTMYSRCGAIVEARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFE 527
           IPD+PV+N+L+TMYSRCG I+E+R IFDEMKL+R+VI+WNAMIGGYA HG A+EAL LF 
Sbjct: 440 IPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFG 499

Query: 528 LMKQCNVQPTYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRN 587
            MK   + P++ITF+SVLNACAHAGL++E + +F SM++ + I+P++EHY++LV++    
Sbjct: 500 SMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQ 559

Query: 588 GQLEEAVSLINSMPCEPDKAVWGALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLY 647
           GQ EEA+ +I SMP EPDK VWGALL ACRI+NNV +A   AE + +LEPESS P+VLLY
Sbjct: 560 GQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLY 619

Query: 648 NMYAEVGRWDDAAEVRTMMEKNNVQKEAGYSRVDS 674
           NMYA++G WD+A++VR  ME   ++KE G S VDS
Sbjct: 620 NMYADMGLWDEASQVRMNMESKRIKKERGSSWVDS 654

[Close]
BLAST of CcUC02G021330 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 1.9e-143
Identity = 263/651 (40.40%), Postives = 389/651 (59.75%), Query Frame = 0 

Query: 44  LKQRC--------FSSSSRANSFQVPK-------------FHSLNKKMSNLIQAGRIIEA 103
           LK+RC        F S  RA   Q+ K                 N  +S+ ++ GR  EA
Sbjct: 24  LKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEA 83

Query: 104 RELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEMPNRSTVSWNLMLSGYISCGGRY 163
             +F  +   +++++N MI+GY++  E   AR+LFDEMP R  VSWN+M+ GY+    R 
Sbjct: 84  LRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVR--NRN 143

Query: 164 LERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEELFNYMPERNIVSWNAMVSGYLMN 223
           L + R +F+ MPERD  SWNTMLSGYA+NG +D A  +F+ MPE+N VSWNA++S Y+ N
Sbjct: 144 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN 203

Query: 224 GYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAERILLQYGGNDGRGDLVHAYNTL 283
             +E+A   FK        S + L+ G ++  K+VEA +        D     V ++NT+
Sbjct: 204 SKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD-----VVSWNTI 263

Query: 284 IAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNVVSWNSMIMSYVRAGDIVSAREL 343
           I GY Q G   EAR+LFD  P+             ++V +W +M+  Y++   +  AREL
Sbjct: 264 ITGYAQSGKIDEARQLFDESPV-------------QDVFTWTAMVSGYIQNRMVEEAREL 323

Query: 344 FDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEPDTLSWNMMISGFAEIGNLKLAH 403
           FDKM ER+  SWN M++GYVQ   M+ A  LF  MP  +  +WN MI+G+A+ G +  A 
Sbjct: 324 FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 383

Query: 404 DLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQLEGRKPDRHTLSSILSACAGLV 463
           +LF +MP +  VSW +MI+   ++     A+ +F+QM+ EG + +R + SS LS CA +V
Sbjct: 384 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 443

Query: 464 DLASGTQIH-QLVTKAFIPDLPVNNSLVTMYSRCGAIVEARTIFDEMKLQRDVISWNAMI 523
            L  G Q+H +LV   +     V N+L+ MY +CG+I EA  +F EM   +D++SWN MI
Sbjct: 444 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM-AGKDIVSWNTMI 503

Query: 524 GGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACAHAGLIEEGRREFNSMVNTHGI 583
            GY+ HGF   AL+ FE MK+  ++P   T ++VL+AC+H GL+++GR+ F +M   +G+
Sbjct: 504 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 563

Query: 584 KPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVWGALLGACRIHNNVEMARAVAE 643
            P  +HYA +VD++GR G LE+A +L+ +MP EPD A+WG LLGA R+H N E+A   A+
Sbjct: 564 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 623

Query: 644 VLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKNNVQKEAGYSRVD 673
            +  +EPE+S  +VLL N+YA  GRW D  ++R  M    V+K  GYS ++
Sbjct: 624 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653

[Close]
BLAST of CcUC02G021330 vs. ExPASy Swiss-Prot
Match: Q56XI1 (Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H18 PE=1 SV=2)

HSP 1 Score: 456.4 bits (1173), Expect = 5.4e-127
Identity = 231/605 (38.18%), Postives = 365/605 (60.33%), Query Frame = 0 

Query: 67  NKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEMPNRSTV 126
           N ++++L + G+I EAR+LFD  + ++  +WN+M+AGY        AR+LFDEMP+R+ +
Sbjct: 21  NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80

Query: 127 SWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEELFNYMPE 186
           SWN ++SGY+  G   ++  R +FD MPER+ VSW  ++ GY  NG +D AE LF  MPE
Sbjct: 81  SWNGLVSGYMKNG--EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 140

Query: 187 RNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAERILLQY 246
           +N VSW  M+ G+L +G ++ A + ++M+P++D+ + ++++ GL                
Sbjct: 141 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC--------------- 200

Query: 247 GGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNVVSWNSM 306
                                ++G   EAR++FD +             S R+V++W +M
Sbjct: 201 ---------------------KEGRVDEAREIFDEM-------------SERSVITWTTM 260

Query: 307 IMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEPDTLSWN 366
           +  Y +   +  AR++FD M E+   SW +M+ GYVQ   +++A  LF  MP    ++ N
Sbjct: 261 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 320

Query: 367 MMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQLEGRKP 426
            MISG  + G +  A  +F  M  ++  SW ++I   E+N     A+++F+ MQ +G +P
Sbjct: 321 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 380

Query: 427 DRHTLSSILSACAGLVDLASGTQIH-QLVTKAFIPDLPVNNSLVTMYSRCGAIVEARTIF 486
              TL SILS CA L  L  G Q+H QLV   F  D+ V + L+TMY +CG +V+++ IF
Sbjct: 381 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 440

Query: 487 DEMKLQRDVISWNAMIGGYASHGFATEALQLF-ELMKQCNVQPTYITFISVLNACAHAGL 546
           D     +D+I WN++I GYASHG   EAL++F E+    + +P  +TF++ L+AC++AG+
Sbjct: 441 DRFP-SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 500

Query: 547 IEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVWGALL 606
           +EEG + + SM +  G+KP   HYA +VD++GR G+  EA+ +I+SM  EPD AVWG+LL
Sbjct: 501 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 560

Query: 607 GACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKNNVQK 666
           GACR H+ +++A   A+ L+++EPE+S  ++LL NMYA  GRW D AE+R +M+   V+K
Sbjct: 561 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 573

Query: 667 EAGYS 670
             G S
Sbjct: 621 SPGCS 573

[Close]
BLAST of CcUC02G021330 vs. ExPASy Swiss-Prot
Match: O64766 (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E15 PE=2 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.6e-118
Identity = 232/634 (36.59%), Postives = 359/634 (56.62%), Query Frame = 0 

Query: 42  FQLKQRCFSSSSRANSFQVPKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMI 101
           F L +  +SSSSR      P+       +  L + G+I EAR+LFDG+  R+ +TW  +I
Sbjct: 31  FNLVRSIYSSSSR------PRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVI 90

Query: 102 AGYVKRREMSKARQLFDEMPNR-STVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVS 161
            GY+K  +M +AR+LFD + +R + V+W  M+SGY+    + L     +F EMPER+ VS
Sbjct: 91  TGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLR--SKQLSIAEMLFQEMPERNVVS 150

Query: 162 WNTMLSGYAKNGMMDKAEELFNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDS 221
           WNTM+ GYA++G +DKA ELF+ MPERNIVSWN+MV   +  G +++A+  F+ MP RD 
Sbjct: 151 WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV 210

Query: 222 ASLSALVSGLIQNDKLVEAERILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFD 281
            S +A+V GL +N                                    G   EAR+LFD
Sbjct: 211 VSWTAMVDGLAKN------------------------------------GKVDEARRLFD 270

Query: 282 RIPLGRDGKEDECGNSGRNVVSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISG 341
            +P              RN++SWN+MI  Y +   I  A +LF  M ERD  SWNTMI+G
Sbjct: 271 CMP-------------ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITG 330

Query: 342 YVQILDMKEASNLFGRMPEPDTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMI 401
           +++  +M +A  LF RMPE + +SW  MI+G+ E                          
Sbjct: 331 FIRNREMNKACGLFDRMPEKNVISWTTMITGYVE-------------------------- 390

Query: 402 SSCEKNEDYKGAINIFLQMQLEGR-KPDRHTLSSILSACAGLVDLASGTQIHQLVTKA-F 461
                N++ + A+N+F +M  +G  KP+  T  SILSAC+ L  L  G QIHQL++K+  
Sbjct: 391 -----NKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 450

Query: 462 IPDLPVNNSLVTMYSRCGAIVEARTIFDE-MKLQRDVISWNAMIGGYASHGFATEALQLF 521
             +  V ++L+ MYS+ G ++ AR +FD  +  QRD+ISWN+MI  YA HG   EA++++
Sbjct: 451 QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMY 510

Query: 522 ELMKQCNVQPTYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGR 581
             M++   +P+ +T++++L AC+HAGL+E+G   F  +V    +  R EHY  LVD+ GR
Sbjct: 511 NQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGR 570

Query: 582 NGQLEEAVSLINSMPCEPDKAVWGALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLL 641
            G+L++  + IN       ++ +GA+L AC +HN V +A+ V + +++   + +  +VL+
Sbjct: 571 AGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLM 576

Query: 642 YNMYAEVGRWDDAAEVRTMMEKNNVQKEAGYSRV 672
            N+YA  G+ ++AAE+R  M++  ++K+ G S V
Sbjct: 631 SNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWV 576

[Close]
BLAST of CcUC02G021330 vs. ExPASy Swiss-Prot
Match: Q9FXB9 (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 2.7e-118
Identity = 227/605 (37.52%), Postives = 338/605 (55.87%), Query Frame = 0 

Query: 69  KMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEMPNRSTVSW 128
           ++S L + G+I EAR+ FD ++ +   +WN++++GY       +ARQLFDEM  R+ VSW
Sbjct: 23  EISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSW 82

Query: 129 NLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEELFNYMPERN 188
           N ++SGYI    R +   RN+F+ MPER+ VSW  M+ GY + GM+ +AE LF  MPERN
Sbjct: 83  NGLVSGYIK--NRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN 142

Query: 189 IVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAERILLQYGG 248
            VSW  M  G + +G ++KA + + MMP +D                             
Sbjct: 143 EVSWTVMFGGLIDDGRIDKARKLYDMMPVKD----------------------------- 202

Query: 249 NDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNVVSWNSMIM 308
                  V A   +I G  ++G   EAR +FD +               RNVV+W +MI 
Sbjct: 203 -------VVASTNMIGGLCREGRVDEARLIFDEM-------------RERNVVTWTTMIT 262

Query: 309 SYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEPDTLSWNMM 368
            Y +   +  AR+LF+ M E+   SW +M+ GY     +++A   F  MP    ++ N M
Sbjct: 263 GYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAM 322

Query: 369 ISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQLEGRKPDR 428
           I GF E+G +  A  +F  M  +   +W  MI + E+      A+++F QMQ +G +P  
Sbjct: 323 IVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 382

Query: 429 HTLSSILSACAGLVDLASGTQIH-QLVTKAFIPDLPVNNSLVTMYSRCGAIVEARTIFDE 488
            +L SILS CA L  L  G Q+H  LV   F  D+ V + L+TMY +CG +V+A+ +FD 
Sbjct: 383 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 442

Query: 489 MKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACAHAGLIEE 548
               +D+I WN++I GYASHG   EAL++F  M      P  +T I++L AC++AG +EE
Sbjct: 443 FS-SKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 502

Query: 549 GRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVWGALLGAC 608
           G   F SM +   + P VEHY+  VD++GR GQ+++A+ LI SM  +PD  VWGALLGAC
Sbjct: 503 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGAC 562

Query: 609 RIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKNNVQKEAG 668
           + H+ +++A   A+ L + EP+++  +VLL ++ A   +W D A VR  M  NNV K  G
Sbjct: 563 KTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPG 575

Query: 669 YSRVD 673
            S ++
Sbjct: 623 CSWIE 575

[Close]
BLAST of CcUC02G021330 vs. ExPASy TrEMBL
Match: A0A5D3DJ38 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004560 PE=4 SV=1)

HSP 1 Score: 1186.8 bits (3069), Expect = 0.0e+00
Identity = 576/675 (85.33%), Postives = 623/675 (92.30%), Query Frame = 0 

Query: 1   MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQV 60
           M NLVM+RRRIWS + F AAALT+FNAQQH  RRP+ F+ AFQ KQ CF SSS+ANSFQV
Sbjct: 1   MSNLVMVRRRIWSTKTFHAAALTVFNAQQHFRRRPVLFNIAFQFKQTCF-SSSKANSFQV 60

Query: 61  PKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEM 120
           P+F+SL+KK+S LI+ GRI EAR LFD I+H NTITWN MI  YVKRREM KARQLFDEM
Sbjct: 61  PEFYSLDKKISYLIRTGRINEARALFDSIKHWNTITWNRMITAYVKRREMLKARQLFDEM 120

Query: 121 PNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEEL 180
           PNR  VSWNLMLSGYISCGG+++ER RNMFDEMPE DCVSWNTMLSGYAK+GMMDKAEEL
Sbjct: 121 PNRDIVSWNLMLSGYISCGGKFIERARNMFDEMPESDCVSWNTMLSGYAKSGMMDKAEEL 180

Query: 181 FNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAE 240
           FN MPERN+VSWNAMVSGYLMNGYVEKA+EFFK+MP+RDSASL ALVSGLIQNDKLVEAE
Sbjct: 181 FNDMPERNVVSWNAMVSGYLMNGYVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAE 240

Query: 241 RILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNV 300
           RIL QYGGNDG+GDLV AYNTLIAGYGQKGM +EARKLFD IP     +ED+CGNS RNV
Sbjct: 241 RILFQYGGNDGKGDLVDAYNTLIAGYGQKGMAYEARKLFDHIPSLCIQEEDDCGNSRRNV 300

Query: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEP 360
           +SWNSMIM YVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLF RMPEP
Sbjct: 301 ISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEP 360

Query: 361 DTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQ 420
           DTLSWNMMISGF+EIG+L+LA DLFK++P KSLVSWNSMIS  EKNEDYKGA+NIFLQMQ
Sbjct: 361 DTLSWNMMISGFSEIGSLELARDLFKKIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 420

Query: 421 LEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVE 480
           LEG+KPDRHTLSSILSACAGLVDLA GTQIHQLVTKAFI DLP+NNSLVTMYSRCGAIVE
Sbjct: 421 LEGKKPDRHTLSSILSACAGLVDLALGTQIHQLVTKAFIADLPINNSLVTMYSRCGAIVE 480

Query: 481 ARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACA 540
           AR +FDEM LQRDVISWNAMIGGYASHGFATEALQLF LMKQCNVQP+YITFISVLNACA
Sbjct: 481 ARMVFDEMNLQRDVISWNAMIGGYASHGFATEALQLFGLMKQCNVQPSYITFISVLNACA 540

Query: 541 HAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVW 600
           HAGL+E+GRREFNSMVN+HGIKP+VEHYAALVDIIGR+GQLEEA+SLINSMPCEPDKAVW
Sbjct: 541 HAGLVEDGRREFNSMVNSHGIKPQVEHYAALVDIIGRHGQLEEALSLINSMPCEPDKAVW 600

Query: 601 GALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKN 660
           GALLGACR+HNNVEMARA AE LMKL+PESSAP+VLL+NMYA+VGRWDDAAE+RTMMEKN
Sbjct: 601 GALLGACRVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEIRTMMEKN 660

Query: 661 NVQKEAGYSRVDSYC 676
           NV K AGYSRVDSYC
Sbjct: 661 NVLKYAGYSRVDSYC 674

[Close]
BLAST of CcUC02G021330 vs. ExPASy TrEMBL
Match: A0A1S3BHZ1 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490259 PE=4 SV=1)

HSP 1 Score: 1186.0 bits (3067), Expect = 0.0e+00
Identity = 576/675 (85.33%), Postives = 623/675 (92.30%), Query Frame = 0 

Query: 1   MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQV 60
           M NLVM+RRRIWS + F AAALT+FNAQQH  RRP+ F+ AFQ KQ CF SSS+ANSFQV
Sbjct: 1   MSNLVMVRRRIWSTKTFHAAALTVFNAQQHFRRRPVLFNIAFQFKQTCF-SSSKANSFQV 60

Query: 61  PKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEM 120
           P+F+SL+KK+S LI+ GRI EAR LFD I+H NTITWN MI  YVKRREM KARQLFDEM
Sbjct: 61  PEFYSLDKKISYLIRTGRINEARALFDSIKHWNTITWNRMITAYVKRREMLKARQLFDEM 120

Query: 121 PNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEEL 180
           PNR  VSWNLMLSGYISCGG+++ER RNMFDEMPE DCVSWNTMLSGYAK+GMMDKAEEL
Sbjct: 121 PNRDIVSWNLMLSGYISCGGKFIERARNMFDEMPESDCVSWNTMLSGYAKSGMMDKAEEL 180

Query: 181 FNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAE 240
           FN MPERN+VSWNAMVSGYLMNGYVEKA+EFFK+MP+RDSASL ALVSGLIQNDKLVEAE
Sbjct: 181 FNDMPERNVVSWNAMVSGYLMNGYVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAE 240

Query: 241 RILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNV 300
           RIL QYGGNDG+GDLV AYNTLIAGYGQKGM +EARKLFD IP     +ED+CGNS RNV
Sbjct: 241 RILFQYGGNDGKGDLVDAYNTLIAGYGQKGMAYEARKLFDHIPSLCIQEEDDCGNSRRNV 300

Query: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEP 360
           +SWNSMIM +VRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLF RMPEP
Sbjct: 301 ISWNSMIMCHVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEP 360

Query: 361 DTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQ 420
           DTLSWNMMISGF+EIG+L+LA DLFKR+P KSLVSWNSMIS  EKNEDYKGA+NIFLQMQ
Sbjct: 361 DTLSWNMMISGFSEIGSLELARDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 420

Query: 421 LEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVE 480
           LEG+KPDRHTLSSILSACAGLVDLA GTQIHQLVTKAFI DLP+NNSLVTMYSRCGAIVE
Sbjct: 421 LEGKKPDRHTLSSILSACAGLVDLALGTQIHQLVTKAFIADLPINNSLVTMYSRCGAIVE 480

Query: 481 ARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACA 540
           AR +FDEM LQRDVISWNAMIGGYASHGFATEALQLF LMKQCNVQP+YITFISVLNACA
Sbjct: 481 ARMVFDEMNLQRDVISWNAMIGGYASHGFATEALQLFGLMKQCNVQPSYITFISVLNACA 540

Query: 541 HAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVW 600
           HAGL+E+GRREFNSMVN+HGIKP+VEHYAALVDIIGR+GQLEEA+SLINSMPCEPDKAVW
Sbjct: 541 HAGLVEDGRREFNSMVNSHGIKPQVEHYAALVDIIGRHGQLEEALSLINSMPCEPDKAVW 600

Query: 601 GALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKN 660
           GALLGACR+HNNVEMARA AE LMKL+PESSAP+VLL+NMYA+VGRWDDAAE+RTMMEKN
Sbjct: 601 GALLGACRVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEIRTMMEKN 660

Query: 661 NVQKEAGYSRVDSYC 676
           NV K AGYSRVDSYC
Sbjct: 661 NVLKYAGYSRVDSYC 674

[Close]
BLAST of CcUC02G021330 vs. ExPASy TrEMBL
Match: A0A0A0K1D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G017120 PE=4 SV=1)

HSP 1 Score: 1179.5 bits (3050), Expect = 0.0e+00
Identity = 575/675 (85.19%), Postives = 620/675 (91.85%), Query Frame = 0 

Query: 1   MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQV 60
           M NLVM+ RRIWS + F AAALT+FNAQ   HRRP+ F+  FQ KQ CF SSS+ANSFQV
Sbjct: 1   MSNLVMVCRRIWSTKTFHAAALTVFNAQLQFHRRPVLFNIVFQFKQTCF-SSSKANSFQV 60

Query: 61  PKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEM 120
           P+F+SLNKK+S LI+ GRI EARELFD  EH NTITWN MI  YVKRREM KARQLF+EM
Sbjct: 61  PEFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEM 120

Query: 121 PNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEEL 180
           PNR  VSWNLMLSGYISCGG+++ER RNMFD+MPE DCVSWNTMLSGYAK+GMMDKAEEL
Sbjct: 121 PNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEEL 180

Query: 181 FNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAE 240
           FN MPERN+VSWNAMVSGYLMNG+VEKA+EFFK+MP+RDSASL AL+SGLIQNDKLVEAE
Sbjct: 181 FNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAE 240

Query: 241 RILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNV 300
           RILLQYGGN G+GDLV AYNTLIAGYGQKGM +EARKLFDRIPL  D     CG S RNV
Sbjct: 241 RILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCD-----CGYSRRNV 300

Query: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEP 360
           +SWNSMIM YVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLF RMPEP
Sbjct: 301 ISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEP 360

Query: 361 DTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQ 420
           DTLSWNMMISGF+EIG+LKLAHDLFKR+P KSLVSWNSMIS  EKNEDYKGA+NIFLQMQ
Sbjct: 361 DTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 420

Query: 421 LEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVE 480
           LEG+KPDRHTLSSILSACAGLVDL  GTQIHQLVTKAFI DLP+NNSLVTMYSRCGAIVE
Sbjct: 421 LEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFIADLPINNSLVTMYSRCGAIVE 480

Query: 481 ARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACA 540
           AR +FDEM LQRDVISWNAMIGGYA HGFATEALQLF+LMKQCNVQP+YITFISVLNACA
Sbjct: 481 ARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACA 540

Query: 541 HAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVW 600
           HAGLIEEGRREFNSMVNTHGIKP+VEHYAALVDIIGR+GQLEEA+SLINSMPCEPDKAVW
Sbjct: 541 HAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVW 600

Query: 601 GALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKN 660
           GALLGAC++HNNVEMARA AE LMKL+PESSAP+VLL+NMYA+VGRWDDAAE+RTMMEKN
Sbjct: 601 GALLGACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKN 660

Query: 661 NVQKEAGYSRVDSYC 676
           NVQK+AGYSRVDSYC
Sbjct: 661 NVQKDAGYSRVDSYC 669

[Close]
BLAST of CcUC02G021330 vs. ExPASy TrEMBL
Match: A0A6J1EJ37 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435059 PE=4 SV=1)

HSP 1 Score: 1179.1 bits (3049), Expect = 0.0e+00
Identity = 571/674 (84.72%), Postives = 622/674 (92.28%), Query Frame = 0 

Query: 1   MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQV 60
           MPNLVMIRRRIWS + F  AALTIFNAQ+++ RRP  F+ +FQLKQ CFS      SFQ 
Sbjct: 1   MPNLVMIRRRIWSTKTFHTAALTIFNAQRYVRRRPTTFNISFQLKQSCFS------SFQA 60

Query: 61  PKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEM 120
           P+F+SLNK+MS LI+ G+IIEAR+LFD I+HRNTITWNTMI GYVKRREM+KARQLFDEM
Sbjct: 61  PEFYSLNKRMSYLIRTGQIIEARKLFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEM 120

Query: 121 PNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEEL 180
           P+R  VSWNLMLSGYISCGGRY+E GRN+FD+MP+RDCVSWNTM+SGYAKNGMM++AEEL
Sbjct: 121 PHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEEL 180

Query: 181 FNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAE 240
           F YMPERN+VSWNAMVSGYLMNGYVEKA+EFFKMMPERDSASLSALVSGLIQN+KLVEAE
Sbjct: 181 FKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEAE 240

Query: 241 RILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNV 300
           RILLQYGG+DGRG+LVHAYNTLIAGYGQKGM  EARKLFD IP   + +EDE G+ G+NV
Sbjct: 241 RILLQYGGSDGRGNLVHAYNTLIAGYGQKGMIQEARKLFDCIP---NRQEDENGSFGKNV 300

Query: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEP 360
           VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGY+QILDMKEASNLFGRM  P
Sbjct: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYIQILDMKEASNLFGRMSNP 360

Query: 361 DTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQ 420
           DTLSWNMMISGFAEIGNLKLAHDLF RMP KSLVSWNSMIS  EKNEDYKGAINIFLQMQ
Sbjct: 361 DTLSWNMMISGFAEIGNLKLAHDLFIRMPEKSLVSWNSMISGYEKNEDYKGAINIFLQMQ 420

Query: 421 LEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVE 480
            EG+KPDRHTLSSI+SACAGLVDLA GTQIHQL+TKAFI DLP+NNSLVTMYSRCGAIVE
Sbjct: 421 FEGKKPDRHTLSSIISACAGLVDLALGTQIHQLITKAFIADLPINNSLVTMYSRCGAIVE 480

Query: 481 ARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACA 540
           ART+FDEM LQRDVISWNAMIG YASHGFATEALQLF+LMKQCNVQP+YITFISVLNACA
Sbjct: 481 ARTVFDEMNLQRDVISWNAMIGAYASHGFATEALQLFDLMKQCNVQPSYITFISVLNACA 540

Query: 541 HAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVW 600
           H GLIEEGRREFNSMVN HGI+PRVEHYA LVDIIGR+GQLEEA+SLIN+MPC+PDKAVW
Sbjct: 541 HVGLIEEGRREFNSMVNAHGIEPRVEHYAVLVDIIGRHGQLEEAMSLINNMPCKPDKAVW 600

Query: 601 GALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKN 660
           GALLGACR+HNNVEMAR  AE LMKLEPES+AP+VLLYNMYA+VGRW+DAAEVRT MEKN
Sbjct: 601 GALLGACRVHNNVEMARVAAEALMKLEPESAAPYVLLYNMYADVGRWNDAAEVRTRMEKN 660

Query: 661 NVQKEAGYSRVDSY 675
           N+QKE GYSRVDS+
Sbjct: 661 NIQKETGYSRVDSW 665

[Close]
BLAST of CcUC02G021330 vs. ExPASy TrEMBL
Match: A0A6J1JFD5 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486397 PE=4 SV=1)

HSP 1 Score: 1174.8 bits (3038), Expect = 0.0e+00
Identity = 571/674 (84.72%), Postives = 619/674 (91.84%), Query Frame = 0 

Query: 1   MPNLVMIRRRIWSPEIFRAAALTIFNAQQHLHRRPIQFDNAFQLKQRCFSSSSRANSFQV 60
           MPNLVMIRRRIWS + F  AALTIFNAQQ++ RRP  F  +FQLKQ  FS      SFQ 
Sbjct: 1   MPNLVMIRRRIWSTKTFHTAALTIFNAQQYVRRRPTTFSISFQLKQSSFS------SFQA 60

Query: 61  PKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEM 120
           P+F+SLNKKMS LI+ G+IIEARELFD I+HRNT+TWNTMI GYVKRREM+KARQLFDEM
Sbjct: 61  PEFYSLNKKMSYLIRTGQIIEARELFDSIKHRNTVTWNTMITGYVKRREMTKARQLFDEM 120

Query: 121 PNRSTVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEEL 180
           P+R  VSWNLMLSGYISCGGRY+E GRN+FD+MP+RDCVSWNTM+SGYAKNGMM++AEEL
Sbjct: 121 PHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEEL 180

Query: 181 FNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAE 240
           F YMPERN+VSWNAMVSGYLMNGYVEKA+EFFKMMPERDSASLSALVSGLIQN+KLVEAE
Sbjct: 181 FKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEAE 240

Query: 241 RILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNV 300
           RILLQYGG+DGRG+LVHAYNTLIAGYGQKGM  EARKLFD IP   + +EDE G+ G+NV
Sbjct: 241 RILLQYGGSDGRGNLVHAYNTLIAGYGQKGMIQEARKLFDCIP---NRQEDENGSFGKNV 300

Query: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEP 360
           VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGY+QILDMKEASNLFGRM  P
Sbjct: 301 VSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYIQILDMKEASNLFGRMSNP 360

Query: 361 DTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQ 420
           DTLSWNMMISGFAEIGNLKLAHDLF RMP KSLVSWNSMIS  EKNEDYKGAINIFL MQ
Sbjct: 361 DTLSWNMMISGFAEIGNLKLAHDLFIRMPEKSLVSWNSMISGYEKNEDYKGAINIFLHMQ 420

Query: 421 LEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAFIPDLPVNNSLVTMYSRCGAIVE 480
            EG+KPDRHTLSSI+SACAGLVDLA GTQIHQL+TKAFI DLP+NNSLVTMYSRCGAIVE
Sbjct: 421 FEGKKPDRHTLSSIISACAGLVDLALGTQIHQLITKAFIADLPINNSLVTMYSRCGAIVE 480

Query: 481 ARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACA 540
           ART+FDEM LQRDVISWNAMI  YASHGFATEALQLF+LM QCNVQP+YITFISVLNACA
Sbjct: 481 ARTVFDEMNLQRDVISWNAMICAYASHGFATEALQLFDLMNQCNVQPSYITFISVLNACA 540

Query: 541 HAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVW 600
           HAGLIEEGRREFNSMVNTHGI+PRVEHYA LVDIIGR+GQLEEA+SLIN+MPC+PDKAVW
Sbjct: 541 HAGLIEEGRREFNSMVNTHGIEPRVEHYAVLVDIIGRHGQLEEAMSLINNMPCKPDKAVW 600

Query: 601 GALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKN 660
           GALLGACR+HNNVEMAR  AE LMKLEPES+AP+VLLYNMYA+VGRW+DAAEVRT MEKN
Sbjct: 601 GALLGACRVHNNVEMARVAAEALMKLEPESAAPYVLLYNMYADVGRWNDAAEVRTRMEKN 660

Query: 661 NVQKEAGYSRVDSY 675
           N+QKE GYSRVDS+
Sbjct: 661 NIQKETGYSRVDSW 665

[Close]
BLAST of CcUC02G021330 vs. TAIR 10
Match: AT1G62260.1 (mitochondrial editing factor 9 )

HSP 1 Score: 749.6 bits (1934), Expect = 2.2e-216
Identity = 360/635 (56.69%), Postives = 475/635 (74.80%), Query Frame = 0 

Query: 48  CFSSSSRANSFQVP-----KFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIA 107
           C      ANSF         F + NK+++ +I++G I EAR++F+ +E RNT+TWNTMI+
Sbjct: 20  CLKCLLCANSFSTSVSSSLGFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMIS 79

Query: 108 GYVKRREMSKARQLFDEMPNRSTVSWNLMLSGYISCGG-RYLERGRNMFDEMPERDCVSW 167
           GYVKRREM++AR+LFD MP R  V+WN M+SGY+SCGG R+LE  R +FDEMP RD  SW
Sbjct: 80  GYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSW 139

Query: 168 NTMLSGYAKNGMMDKAEELFNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSA 227
           NTM+SGYAKN  + +A  LF  MPERN VSW+AM++G+  NG V+ AV  F+ MP +DS+
Sbjct: 140 NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSS 199

Query: 228 SLSALVSGLIQNDKLVEAERILLQYGG-NDGRGDLVHAYNTLIAGYGQKGMTHEARKLFD 287
            L ALV+GLI+N++L EA  +L QYG    GR DLV+AYNTLI GYGQ+G    AR LFD
Sbjct: 200 PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFD 259

Query: 288 RIP--LGRDGKEDECGNSGRNVVSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMI 347
           +IP   G D   +      +NVVSWNSMI +Y++ GD+VSAR LFD+M +RDT SWNTMI
Sbjct: 260 QIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMI 319

Query: 348 SGYVQILDMKEASNLFGRMPEPDTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNS 407
            GYV +  M++A  LF  MP  D  SWNMM+SG+A +GN++LA   F++ P K  VSWNS
Sbjct: 320 DGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNS 379

Query: 408 MISSCEKNEDYKGAINIFLQMQLEGRKPDRHTLSSILSACAGLVDLASGTQIHQLVTKAF 467
           +I++ EKN+DYK A+++F++M +EG KPD HTL+S+LSA  GLV+L  G Q+HQ+V K  
Sbjct: 380 IIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV 439

Query: 468 IPDLPVNNSLVTMYSRCGAIVEARTIFDEMKLQRDVISWNAMIGGYASHGFATEALQLFE 527
           IPD+PV+N+L+TMYSRCG I+E+R IFDEMKL+R+VI+WNAMIGGYA HG A+EAL LF 
Sbjct: 440 IPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFG 499

Query: 528 LMKQCNVQPTYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRN 587
            MK   + P++ITF+SVLNACAHAGL++E + +F SM++ + I+P++EHY++LV++    
Sbjct: 500 SMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQ 559

Query: 588 GQLEEAVSLINSMPCEPDKAVWGALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLLY 647
           GQ EEA+ +I SMP EPDK VWGALL ACRI+NNV +A   AE + +LEPESS P+VLLY
Sbjct: 560 GQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLY 619

Query: 648 NMYAEVGRWDDAAEVRTMMEKNNVQKEAGYSRVDS 674
           NMYA++G WD+A++VR  ME   ++KE G S VDS
Sbjct: 620 NMYADMGLWDEASQVRMNMESKRIKKERGSSWVDS 654

[Close]
BLAST of CcUC02G021330 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 511.1 bits (1315), Expect = 1.3e-144
Identity = 263/651 (40.40%), Postives = 389/651 (59.75%), Query Frame = 0 

Query: 44  LKQRC--------FSSSSRANSFQVPK-------------FHSLNKKMSNLIQAGRIIEA 103
           LK+RC        F S  RA   Q+ K                 N  +S+ ++ GR  EA
Sbjct: 24  LKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEA 83

Query: 104 RELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEMPNRSTVSWNLMLSGYISCGGRY 163
             +F  +   +++++N MI+GY++  E   AR+LFDEMP R  VSWN+M+ GY+    R 
Sbjct: 84  LRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVR--NRN 143

Query: 164 LERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEELFNYMPERNIVSWNAMVSGYLMN 223
           L + R +F+ MPERD  SWNTMLSGYA+NG +D A  +F+ MPE+N VSWNA++S Y+ N
Sbjct: 144 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN 203

Query: 224 GYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAERILLQYGGNDGRGDLVHAYNTL 283
             +E+A   FK        S + L+ G ++  K+VEA +        D     V ++NT+
Sbjct: 204 SKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD-----VVSWNTI 263

Query: 284 IAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNVVSWNSMIMSYVRAGDIVSAREL 343
           I GY Q G   EAR+LFD  P+             ++V +W +M+  Y++   +  AREL
Sbjct: 264 ITGYAQSGKIDEARQLFDESPV-------------QDVFTWTAMVSGYIQNRMVEEAREL 323

Query: 344 FDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEPDTLSWNMMISGFAEIGNLKLAH 403
           FDKM ER+  SWN M++GYVQ   M+ A  LF  MP  +  +WN MI+G+A+ G +  A 
Sbjct: 324 FDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 383

Query: 404 DLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQLEGRKPDRHTLSSILSACAGLV 463
           +LF +MP +  VSW +MI+   ++     A+ +F+QM+ EG + +R + SS LS CA +V
Sbjct: 384 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 443

Query: 464 DLASGTQIH-QLVTKAFIPDLPVNNSLVTMYSRCGAIVEARTIFDEMKLQRDVISWNAMI 523
            L  G Q+H +LV   +     V N+L+ MY +CG+I EA  +F EM   +D++SWN MI
Sbjct: 444 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM-AGKDIVSWNTMI 503

Query: 524 GGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACAHAGLIEEGRREFNSMVNTHGI 583
            GY+ HGF   AL+ FE MK+  ++P   T ++VL+AC+H GL+++GR+ F +M   +G+
Sbjct: 504 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 563

Query: 584 KPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVWGALLGACRIHNNVEMARAVAE 643
            P  +HYA +VD++GR G LE+A +L+ +MP EPD A+WG LLGA R+H N E+A   A+
Sbjct: 564 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 623

Query: 644 VLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKNNVQKEAGYSRVD 673
            +  +EPE+S  +VLL N+YA  GRW D  ++R  M    V+K  GYS ++
Sbjct: 624 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653

[Close]
BLAST of CcUC02G021330 vs. TAIR 10
Match: AT1G09410.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 456.4 bits (1173), Expect = 3.9e-128
Identity = 231/605 (38.18%), Postives = 365/605 (60.33%), Query Frame = 0 

Query: 67  NKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEMPNRSTV 126
           N ++++L + G+I EAR+LFD  + ++  +WN+M+AGY        AR+LFDEMP+R+ +
Sbjct: 21  NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80

Query: 127 SWNLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEELFNYMPE 186
           SWN ++SGY+  G   ++  R +FD MPER+ VSW  ++ GY  NG +D AE LF  MPE
Sbjct: 81  SWNGLVSGYMKNG--EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 140

Query: 187 RNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAERILLQY 246
           +N VSW  M+ G+L +G ++ A + ++M+P++D+ + ++++ GL                
Sbjct: 141 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC--------------- 200

Query: 247 GGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNVVSWNSM 306
                                ++G   EAR++FD +             S R+V++W +M
Sbjct: 201 ---------------------KEGRVDEAREIFDEM-------------SERSVITWTTM 260

Query: 307 IMSYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEPDTLSWN 366
           +  Y +   +  AR++FD M E+   SW +M+ GYVQ   +++A  LF  MP    ++ N
Sbjct: 261 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 320

Query: 367 MMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQLEGRKP 426
            MISG  + G +  A  +F  M  ++  SW ++I   E+N     A+++F+ MQ +G +P
Sbjct: 321 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 380

Query: 427 DRHTLSSILSACAGLVDLASGTQIH-QLVTKAFIPDLPVNNSLVTMYSRCGAIVEARTIF 486
              TL SILS CA L  L  G Q+H QLV   F  D+ V + L+TMY +CG +V+++ IF
Sbjct: 381 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 440

Query: 487 DEMKLQRDVISWNAMIGGYASHGFATEALQLF-ELMKQCNVQPTYITFISVLNACAHAGL 546
           D     +D+I WN++I GYASHG   EAL++F E+    + +P  +TF++ L+AC++AG+
Sbjct: 441 DRFP-SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 500

Query: 547 IEEGRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVWGALL 606
           +EEG + + SM +  G+KP   HYA +VD++GR G+  EA+ +I+SM  EPD AVWG+LL
Sbjct: 501 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 560

Query: 607 GACRIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKNNVQK 666
           GACR H+ +++A   A+ L+++EPE+S  ++LL NMYA  GRW D AE+R +M+   V+K
Sbjct: 561 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 573

Query: 667 EAGYS 670
             G S
Sbjct: 621 SPGCS 573

[Close]
BLAST of CcUC02G021330 vs. TAIR 10
Match: AT2G35030.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 428.3 bits (1100), Expect = 1.1e-119
Identity = 232/634 (36.59%), Postives = 359/634 (56.62%), Query Frame = 0 

Query: 42  FQLKQRCFSSSSRANSFQVPKFHSLNKKMSNLIQAGRIIEARELFDGIEHRNTITWNTMI 101
           F L +  +SSSSR      P+       +  L + G+I EAR+LFDG+  R+ +TW  +I
Sbjct: 31  FNLVRSIYSSSSR------PRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVI 90

Query: 102 AGYVKRREMSKARQLFDEMPNR-STVSWNLMLSGYISCGGRYLERGRNMFDEMPERDCVS 161
            GY+K  +M +AR+LFD + +R + V+W  M+SGY+    + L     +F EMPER+ VS
Sbjct: 91  TGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLR--SKQLSIAEMLFQEMPERNVVS 150

Query: 162 WNTMLSGYAKNGMMDKAEELFNYMPERNIVSWNAMVSGYLMNGYVEKAVEFFKMMPERDS 221
           WNTM+ GYA++G +DKA ELF+ MPERNIVSWN+MV   +  G +++A+  F+ MP RD 
Sbjct: 151 WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV 210

Query: 222 ASLSALVSGLIQNDKLVEAERILLQYGGNDGRGDLVHAYNTLIAGYGQKGMTHEARKLFD 281
            S +A+V GL +N                                    G   EAR+LFD
Sbjct: 211 VSWTAMVDGLAKN------------------------------------GKVDEARRLFD 270

Query: 282 RIPLGRDGKEDECGNSGRNVVSWNSMIMSYVRAGDIVSARELFDKMVERDTFSWNTMISG 341
            +P              RN++SWN+MI  Y +   I  A +LF  M ERD  SWNTMI+G
Sbjct: 271 CMP-------------ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITG 330

Query: 342 YVQILDMKEASNLFGRMPEPDTLSWNMMISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMI 401
           +++  +M +A  LF RMPE + +SW  MI+G+ E                          
Sbjct: 331 FIRNREMNKACGLFDRMPEKNVISWTTMITGYVE-------------------------- 390

Query: 402 SSCEKNEDYKGAINIFLQMQLEGR-KPDRHTLSSILSACAGLVDLASGTQIHQLVTKA-F 461
                N++ + A+N+F +M  +G  KP+  T  SILSAC+ L  L  G QIHQL++K+  
Sbjct: 391 -----NKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 450

Query: 462 IPDLPVNNSLVTMYSRCGAIVEARTIFDE-MKLQRDVISWNAMIGGYASHGFATEALQLF 521
             +  V ++L+ MYS+ G ++ AR +FD  +  QRD+ISWN+MI  YA HG   EA++++
Sbjct: 451 QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMY 510

Query: 522 ELMKQCNVQPTYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPRVEHYAALVDIIGR 581
             M++   +P+ +T++++L AC+HAGL+E+G   F  +V    +  R EHY  LVD+ GR
Sbjct: 511 NQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGR 570

Query: 582 NGQLEEAVSLINSMPCEPDKAVWGALLGACRIHNNVEMARAVAEVLMKLEPESSAPFVLL 641
            G+L++  + IN       ++ +GA+L AC +HN V +A+ V + +++   + +  +VL+
Sbjct: 571 AGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLM 576

Query: 642 YNMYAEVGRWDDAAEVRTMMEKNNVQKEAGYSRV 672
            N+YA  G+ ++AAE+R  M++  ++K+ G S V
Sbjct: 631 SNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWV 576

[Close]
BLAST of CcUC02G021330 vs. TAIR 10
Match: AT1G56690.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 427.6 bits (1098), Expect = 1.9e-119
Identity = 227/605 (37.52%), Postives = 338/605 (55.87%), Query Frame = 0 

Query: 69  KMSNLIQAGRIIEARELFDGIEHRNTITWNTMIAGYVKRREMSKARQLFDEMPNRSTVSW 128
           ++S L + G+I EAR+ FD ++ +   +WN++++GY       +ARQLFDEM  R+ VSW
Sbjct: 23  EISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSW 82

Query: 129 NLMLSGYISCGGRYLERGRNMFDEMPERDCVSWNTMLSGYAKNGMMDKAEELFNYMPERN 188
           N ++SGYI    R +   RN+F+ MPER+ VSW  M+ GY + GM+ +AE LF  MPERN
Sbjct: 83  NGLVSGYIK--NRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN 142

Query: 189 IVSWNAMVSGYLMNGYVEKAVEFFKMMPERDSASLSALVSGLIQNDKLVEAERILLQYGG 248
            VSW  M  G + +G ++KA + + MMP +D                             
Sbjct: 143 EVSWTVMFGGLIDDGRIDKARKLYDMMPVKD----------------------------- 202

Query: 249 NDGRGDLVHAYNTLIAGYGQKGMTHEARKLFDRIPLGRDGKEDECGNSGRNVVSWNSMIM 308
                  V A   +I G  ++G   EAR +FD +               RNVV+W +MI 
Sbjct: 203 -------VVASTNMIGGLCREGRVDEARLIFDEM-------------RERNVVTWTTMIT 262

Query: 309 SYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFGRMPEPDTLSWNMM 368
            Y +   +  AR+LF+ M E+   SW +M+ GY     +++A   F  MP    ++ N M
Sbjct: 263 GYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAM 322

Query: 369 ISGFAEIGNLKLAHDLFKRMPAKSLVSWNSMISSCEKNEDYKGAINIFLQMQLEGRKPDR 428
           I GF E+G +  A  +F  M  +   +W  MI + E+      A+++F QMQ +G +P  
Sbjct: 323 IVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 382

Query: 429 HTLSSILSACAGLVDLASGTQIH-QLVTKAFIPDLPVNNSLVTMYSRCGAIVEARTIFDE 488
            +L SILS CA L  L  G Q+H  LV   F  D+ V + L+TMY +CG +V+A+ +FD 
Sbjct: 383 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 442

Query: 489 MKLQRDVISWNAMIGGYASHGFATEALQLFELMKQCNVQPTYITFISVLNACAHAGLIEE 548
               +D+I WN++I GYASHG   EAL++F  M      P  +T I++L AC++AG +EE
Sbjct: 443 FS-SKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 502

Query: 549 GRREFNSMVNTHGIKPRVEHYAALVDIIGRNGQLEEAVSLINSMPCEPDKAVWGALLGAC 608
           G   F SM +   + P VEHY+  VD++GR GQ+++A+ LI SM  +PD  VWGALLGAC
Sbjct: 503 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGAC 562

Query: 609 RIHNNVEMARAVAEVLMKLEPESSAPFVLLYNMYAEVGRWDDAAEVRTMMEKNNVQKEAG 668
           + H+ +++A   A+ L + EP+++  +VLL ++ A   +W D A VR  M  NNV K  G
Sbjct: 563 KTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPG 575

Query: 669 YSRVD 673
            S ++
Sbjct: 623 CSWIE 575

The following BLAST results are available for this feature:
BLAST of CcUC02G021330 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886946.10.0e+0088.44pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Benincasa ... [more]
KAA0040316.10.0e+0085.33pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK23390... [more]
XP_008447916.10.0e+0085.33PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial ... [more]
XP_004144924.20.0e+0085.19pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Cucumis sa... [more]
XP_022928152.10.0e+0084.72pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 ... [more]
BLAST of CcUC02G021330 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O045903.1e-21556.69Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidop... [more]
Q9SY021.9e-14340.40Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
Q56XI15.4e-12738.18Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidop... [more]
O647661.6e-11836.59Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidop... [more]
Q9FXB92.7e-11837.52Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidop... [more]
BLAST of CcUC02G021330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DJ380.0e+0085.33Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BHZ10.0e+0085.33pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Cucumis ... [more]
A0A0A0K1D80.0e+0085.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G017120 PE=4 SV=1[more]
A0A6J1EJ370.0e+0084.72pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 ... [more]
A0A6J1JFD50.0e+0084.72pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 ... [more]
BLAST of CcUC02G021330 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G62260.12.2e-21656.69mitochondrial editing factor 9 [more]
AT4G02750.11.3e-14440.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G09410.13.9e-12838.18pentatricopeptide (PPR) repeat-containing protein [more]
AT2G35030.11.1e-11936.59Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G56690.11.9e-11937.52Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 140..246
e-value: 1.6E-26
score: 94.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 555..673
e-value: 3.2E-15
score: 58.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 254..391
e-value: 1.3E-27
score: 99.0
coord: 397..554
e-value: 6.4E-38
score: 132.8
coord: 21..139
e-value: 4.3E-13
score: 51.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 291..652
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 258..281
e-value: 2.3E-5
score: 22.3
coord: 95..123
e-value: 4.8E-8
score: 30.7
coord: 301..330
e-value: 3.8E-7
score: 27.9
coord: 159..190
e-value: 1.1E-9
score: 35.8
coord: 332..358
e-value: 0.0026
score: 15.8
coord: 364..392
e-value: 3.4E-5
score: 21.7
coord: 394..427
e-value: 1.6E-5
score: 22.7
coord: 190..219
e-value: 1.8E-6
score: 25.7
coord: 495..528
e-value: 1.0E-6
score: 26.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 92..124
e-value: 1.3E-8
score: 34.9
coord: 392..439
e-value: 2.5E-9
score: 37.2
coord: 492..540
e-value: 1.2E-10
score: 41.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 190..218
e-value: 9.6E-8
score: 31.8
coord: 466..489
e-value: 0.013
score: 15.7
coord: 258..282
e-value: 1.1E-5
score: 25.3
coord: 301..329
e-value: 2.9E-8
score: 33.4
coord: 364..391
e-value: 6.1E-5
score: 23.0
coord: 126..158
e-value: 1.2
score: 9.6
coord: 332..358
e-value: 1.2E-5
score: 25.2
coord: 568..592
e-value: 0.13
score: 12.6
coord: 159..189
e-value: 9.8E-11
score: 41.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 493..527
score: 12.353442
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 10.566751
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 93..127
score: 11.334042
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 157..191
score: 12.912469
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 299..333
score: 11.038087
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 63..672
NoneNo IPR availablePANTHERPTHR24015:SF1972OS06G0228900 PROTEINcoord: 63..672

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G021330.1CcUC02G021330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding