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CcUC02G020320 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTAGAATTGTAAACAGATTCTTTTAGTTTAAAATCCTGTCCTTTTTCAAACAATTGATTTCAATTTTTTTCCTTTTTTTCTGTTCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTGGCATCCGAACATACTTGTTTTTAATCCTTCCAAATCCAGGTCCAAACAGGGGTTAAGATTATTGAAATATTTGTTTAGGACAAGCTGTGCATTAGAATCAAGTACTATGGTTGATGTTGGGAATGCGGTAAAATTAGTGAGAGGTGCGAAGAGGAGGAAAAAGATGGGTTCAAGGAACAATAAAAGACCGAGGATGATGGGTGGAAGTGGCAACAAAGTTAAGGTTGATAGGAAGATGAAGAAACTTTTCCAAAAACGGGCACGTGAGTATAATTCAGATGATGACGATGACGAGGAGAAGGCTCCAACGGTTGAAAATGCGAGCAAAGTTTTGGTGCGCGGTCATGGGGAGGAGGTTGGAGATGAAGAGTTTTCTGAAGGTGAAGAGGAAGAGAAGGATGTGAATGCAGATGTTGAACTGTCTGAAGATGATGAAAATGGTGAAATTCAACCCGGTATAACGAAGTTTGTGGAGGGTTGTAGAGCATTTCGGGCTGCATTCAGGAGTATTCTCAAGAAGAGCATATCTGATGAAACTCTGGTAGTTTATATCTTAAATGTGCCTGAATTATTTTCAATAATTGAAGTAATGAAGAAATGATTGTGCCATATTTGTGTTGCAGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAAGAAAGAGAAGCGGCTGGTATTTCCTTTTAAATAAAATATCTTGTTTGTTGATTTAGCTTTTGCTTAAAATTGGTTGATTGTAAATGTTTGAATATTGTAGCTAGGAGAGAAAGGCCATGTGAAACCTGCTACTTACCTGGATTCTCACGAAAAGTTTCTTATTGGCCTTGCTACAAAAGGAGGTAGCGTAGTTCTATTTTACTTTGAGATGGGCGTGGTTACCTTTTTTATTTGGACTGGTCTATTACATCTCTCATCATACTAACACAGTTATCTCCATGTGTATTGTTGCTTGCTGATTGTCAGTTGTCAAGTTGTTTAATGCTGTAAGTAGCTAATTTTTGACTTAGACAACTTTTTTTGCCACATCCTCCTTATCTATGTTGCATTCATCACTGAATTCCATTATTTTCAATATGATACAGGTCAACAAGGCACAACATGCTCAGAAGGGTTTGAATCCTTCGAGAACTAAAGATGCTAAAGGTATTATGCCTCCTACATAACTTTGATCTCAGAAGTTAACAAAATCTCAAATTGTGTAGAAGTAAATATAATCTTGTTGCCTTGTGAATATGTTGTCCCTAAATTTGCATTCAATTGATTTTGTTGTCTCTGCATGTTGCATTGTAATAAATCTTGTACCTTGATTTTCCAAGTCATATGATGTATGTCTTATATTTTGTTTTGTGGTTTCTGCTTTGTCTTGAAAACTATGTTTAGTCTGACAACATATTGAACTTCTAATTAATGAGTCATAGGCTACTTGGCTAATTTATTAACTTTGATTGGAATTATATGTGTGTGATTAGAGTAATCAGTGATTTACAAGTTACATCCCTCGAATTTATTGGCTTATTAGTTTTATTGGCCTATTAGTTTTTCATGCTTACTCCCATTCAATTAATGGCTTCCCCTGTTTGCTTATATAGGATTATCTAATGTTTAGTGTAACCTTGTTAGACCCATTTTGTTTGTGTATAAAGACACTTATCCTTTCTTTCTTGATTAGTGAATGGGAATTTTCCATTCGAGACTGAGTGTGAAACCATGTTTTAAGTGGTATTTCATTCTATTCTGTCTCATTCTGAGCATTTTTTTTGGTTTATATTGCCAGCTATAAATAAGCGTAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGACAACTTTGCCAGCAACAAACAGTAATGCAAAGGTTGGTTATTTTTCTACTTTTTCGTCCTCAATCTCAATGAAGTGCTGGTAATTTCTATTTTTAATCTCTTACGAGCAATGTTACCTTTTACAAACACCCAAGTCCCCGTGCATGAGGCAAAGTGTATCCGTGGCCATCATCATTATTGTTTGTGGGCAGTGGAATGGGGAAGGGTAGGGATGTCCATGGGTGGGGCAGGACAGGGATGACTTTCATGTCCCACAAAATTTCATATTAGATTTTATGAGGATCGGGACAGGGATCCCTGCAGAAAATTCACGATATAACAATAATAATCATGATACCAAATTTTGGAAAAGGTAAATGGGATGGGGAACGGGGCCAAGCCCTGCGGGGAAATCGACATCGACTTGGGTGTTGATTAAGGGAGTGAAACTCAGGTCACCATCATATATACTATCTGTTCTTTCATGTCCATAATGCAACAAACTCAAGTGGCCATCTTTTGTGTTGAACAGTTAAACACATCAGATGGTGCAGCGGATGCTGAAGGCCCTGCTTGGGCTCCATTACGTGATAATTATATGCTGACCAATTCCAAGTTAAAAGACTGGGATAAGATGCCAGTAAGATACGATATACTTTTAAAGCCTATTGTCGGTTGTGCTCATTTCTTGCCATTCCGATATTCATATCATTTTGTTCGATTATACTTGCAGGATAATATGACGATGACGACGGGAGAGGACAACGGGAGGACGTTTGAAGACAGTAGTTCAGATGAGGATGATTGACAATTCTAAAATTTCCTAATGAATTGCCTAGTTTGTTGTAGCTTTCAAGTTGGCCTATATTTACAAAGCTGGGTTTCATTTTGGCTTGTTAGCAAATTCACCATGTATGCCTAAGCTATACGTCATCTAGCAAAAAGAAAGAATCTTTTTCCCCTCTATTTCTTTGTCCAATTTTTTAGTCTGTGCCCACCGGTGAGATTCAACTGTATAAATGTTGTCCATTTTGTAGAATTTTCGAGCAAATTGGTTTAAAGTTACAAATTTTGGCCTTGATTTGTATGGATTGCATAAATGGTTTGAAAGAAATGTGTATTTAACCTACCT ATGGGGACAAGCTGTGCATTAGAATCAAGTACTATGGTTGATGTTGGGAATGCGGTAAAATTAGTGAGAGGTGCGAAGAGGAGGAAAAAGATGGGTTCAAGGAACAATAAAAGACCGAGGATGATGGGTGGAAGTGGCAACAAAGTTAAGGTTGATAGGAAGATGAAGAAACTTTTCCAAAAACGGGCACGTGAGTATAATTCAGATGATGACGATGACGAGGAGAAGGCTCCAACGGTTGAAAATGCGAGCAAAGTTTTGGTGCGCGGTCATGGGGAGGAGGTTGGAGATGAAGAGTTTTCTGAAGGTGAAGAGGAAGAGAAGGATGTGAATGCAGATGTTGAACTGTCTGAAGATGATGAAAATGGTGAAATTCAACCCGGTATAACGAAGTTTGTGGAGGGTTGTAGAGCATTTCGGGCTGCATTCAGGAGTATTCTCAAGAAGAGCATATCTGATGAAACTCTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAAGAAAGAGAAGCGGCTGCTAGGAGAGAAAGGCCATGTGAAACCTGCTACTTACCTGGATTCTCACGAAAAGTTTCTTATTGGCCTTGCTACAAAAGGAGGTAGCGTAGTTCTATTTTACTTTGAGATGGGCGTGGTCAACAAGGCACAACATGCTCAGAAGGGTTTGAATCCTTCGAGAACTAAAGATGCTAAAGCTATAAATAAGCGTAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGACAACTTTGCCAGCAACAAACAGTAATGCAAAGTTAAACACATCAGATGGTGCAGCGGATGCTGAAGGCCCTGCTTGGGCTCCATTACGTGATAATTATATGCTGACCAATTCCAAGTTAAAAGACTGGGATAAGATGCCAGATAATATGACGATGACGACGGGAGAGGACAACGGGAGGACGTTTGAAGACAGTAGTTCAGATGAGGATGATTGACAATTCTAAAATTTCCTAATGAATTGCCTAGTTTGTTGTAGCTTTCAAGTTGGCCTATATTTACAAAGCTGGGTTTCATTTTGGCTTGTTAGCAAATTCACCATGTATGCCTAAGCTATACGTCATCTAGCAAAAAGAAAGAATCTTTTTCCCCTCTATTTCTTTGTCCAATTTTTTAGTCTGTGCCCACCGGTGAGATTCAACTGTATAAATGTTGTCCATTTTGTAGAATTTTCGAGCAAATTGGTTTAAAGTTACAAATTTTGGCCTTGATTTGTATGGATTGCATAAATGGTTTGAAAGAAATGTGTATTTAACCTACCT ATGGGGACAAGCTGTGCATTAGAATCAAGTACTATGGTTGATGTTGGGAATGCGGTAAAATTAGTGAGAGGTGCGAAGAGGAGGAAAAAGATGGGTTCAAGGAACAATAAAAGACCGAGGATGATGGGTGGAAGTGGCAACAAAGTTAAGGTTGATAGGAAGATGAAGAAACTTTTCCAAAAACGGGCACGTGAGTATAATTCAGATGATGACGATGACGAGGAGAAGGCTCCAACGGTTGAAAATGCGAGCAAAGTTTTGGTGCGCGGTCATGGGGAGGAGGTTGGAGATGAAGAGTTTTCTGAAGGTGAAGAGGAAGAGAAGGATGTGAATGCAGATGTTGAACTGTCTGAAGATGATGAAAATGGTGAAATTCAACCCGGTATAACGAAGTTTGTGGAGGGTTGTAGAGCATTTCGGGCTGCATTCAGGAGTATTCTCAAGAAGAGCATATCTGATGAAACTCTGGGTCCTATATTATCAGCAAACAAGAAGCTTGTTGCTGAAAAGCTTGCAGAAGAGGAAGCTGAGCGGAAGGTTAAAGGAGAGGCCAAGAAAGAGAAGCGGCTGCTAGGAGAGAAAGGCCATGTGAAACCTGCTACTTACCTGGATTCTCACGAAAAGTTTCTTATTGGCCTTGCTACAAAAGGAGGTAGCGTAGTTCTATTTTACTTTGAGATGGGCGTGGTCAACAAGGCACAACATGCTCAGAAGGGTTTGAATCCTTCGAGAACTAAAGATGCTAAAGCTATAAATAAGCGTAGAAAAGAAGCTTTCTTTTCTGAGTTGGGCAAGACAACTTTGCCAGCAACAAACAGTAATGCAAAGTTAAACACATCAGATGGTGCAGCGGATGCTGAAGGCCCTGCTTGGGCTCCATTACGTGATAATTATATGCTGACCAATTCCAAGTTAAAAGACTGGGATAAGATGCCAGATAATATGACGATGACGACGGGAGAGGACAACGGGAGGACGTTTGAAGACAGTAGTTCAGATGAGGATGATTGA MGTSCALESSTMVDVGNAVKLVRGAKRRKKMGSRNNKRPRMMGGSGNKVKVDRKMKKLFQKRAREYNSDDDDDEEKAPTVENASKVLVRGHGEEVGDEEFSEGEEEEKDVNADVELSEDDENGEIQPGITKFVEGCRAFRAAFRSILKKSISDETLGPILSANKKLVAEKLAEEEAERKVKGEAKKEKRLLGEKGHVKPATYLDSHEKFLIGLATKGGSVVLFYFEMGVVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSELGKTTLPATNSNAKLNTSDGAADAEGPAWAPLRDNYMLTNSKLKDWDKMPDNMTMTTGEDNGRTFEDSSSDEDD Homology
BLAST of CcUC02G020320 vs. NCBI nr
Match: XP_038888922.1 (RRP15-like protein [Benincasa hispida] >XP_038888940.1 RRP15-like protein [Benincasa hispida]) HSP 1 Score: 524.2 bits (1349), Expect = 8.0e-145 Identity = 288/325 (88.62%), Postives = 297/325 (91.38%), Query Frame = 0
BLAST of CcUC02G020320 vs. NCBI nr
Match: XP_004144556.1 (RRP15-like protein [Cucumis sativus] >XP_011658649.1 RRP15-like protein [Cucumis sativus] >KGN43394.1 hypothetical protein Csa_020346 [Cucumis sativus]) HSP 1 Score: 521.2 bits (1341), Expect = 6.8e-144 Identity = 286/326 (87.73%), Postives = 297/326 (91.10%), Query Frame = 0
BLAST of CcUC02G020320 vs. NCBI nr
Match: KAA0059257.1 (RRP15-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 517.3 bits (1331), Expect = 9.8e-143 Identity = 282/326 (86.50%), Postives = 295/326 (90.49%), Query Frame = 0
BLAST of CcUC02G020320 vs. NCBI nr
Match: XP_008462030.1 (PREDICTED: RRP15-like protein [Cucumis melo]) HSP 1 Score: 516.9 bits (1330), Expect = 1.3e-142 Identity = 285/326 (87.42%), Postives = 295/326 (90.49%), Query Frame = 0
BLAST of CcUC02G020320 vs. NCBI nr
Match: TYK03372.1 (RRP15-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 513.5 bits (1321), Expect = 1.4e-141 Identity = 283/326 (86.81%), Postives = 295/326 (90.49%), Query Frame = 0
BLAST of CcUC02G020320 vs. ExPASy TrEMBL
Match: A0A0A0K320 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031550 PE=3 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 3.3e-144 Identity = 286/326 (87.73%), Postives = 297/326 (91.10%), Query Frame = 0
BLAST of CcUC02G020320 vs. ExPASy TrEMBL
Match: A0A5A7UXA3 (RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001920 PE=3 SV=1) HSP 1 Score: 517.3 bits (1331), Expect = 4.8e-143 Identity = 282/326 (86.50%), Postives = 295/326 (90.49%), Query Frame = 0
BLAST of CcUC02G020320 vs. ExPASy TrEMBL
Match: A0A1S3CFX9 (RRP15-like protein OS=Cucumis melo OX=3656 GN=LOC103500496 PE=3 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 6.2e-143 Identity = 285/326 (87.42%), Postives = 295/326 (90.49%), Query Frame = 0
BLAST of CcUC02G020320 vs. ExPASy TrEMBL
Match: A0A5D3BX18 (RRP15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84663G00070 PE=3 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 6.9e-142 Identity = 283/326 (86.81%), Postives = 295/326 (90.49%), Query Frame = 0
BLAST of CcUC02G020320 vs. ExPASy TrEMBL
Match: A0A6J1GMJ1 (LOW QUALITY PROTEIN: RRP15-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455323 PE=3 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 1.4e-123 Identity = 249/301 (82.72%), Postives = 265/301 (88.04%), Query Frame = 0
BLAST of CcUC02G020320 vs. TAIR 10
Match: AT5G48240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 402 Blast hits to 382 proteins in 162 species: Archae - 0; Bacteria - 4; Metazoa - 139; Fungi - 111; Plants - 54; Viruses - 1; Other Eukaryotes - 93 (source: NCBI BLink). ) HSP 1 Score: 249.2 bits (635), Expect = 4.7e-66 Identity = 162/329 (49.24%), Postives = 210/329 (63.83%), Query Frame = 0
BLAST of CcUC02G020320 vs. TAIR 10
Match: AT5G48240.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink). ) HSP 1 Score: 236.1 bits (601), Expect = 4.1e-62 Identity = 163/367 (44.41%), Postives = 212/367 (57.77%), Query Frame = 0
BLAST of CcUC02G020320 vs. TAIR 10
Match: AT5G48240.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 213.4 bits (542), Expect = 2.8e-55 Identity = 135/261 (51.72%), Postives = 179/261 (68.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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