![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC02G020250 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGTTGGGGTATTGCTGTTGAATTTGAGAAAATCAGAAGGGATTAGGTTTGTGATAGACAGGGAAGAATGTTTCTCTCACAATGTTCAATACGAGGGAGATACTGTCCATGTTTCTTTTGTTGTAATCAAGGCAGATTCACCTTGGCACTATGGCGATGATGGAGTTGATCTTGTGGTAAGATTCTTTCTTCCCCATTTCACTTGCCTTTGTTTTGCTTTCCTTTTCAGTAATAGAATTTGAAACTGGGCAAGCAAGATTCATGGTGTTTTTTTTTTTTTCTCTCTTCTTTTTTGGTTGGTGTGTTTCATAATTCTTTGTTAAGAGTCTTTCTTGGTTCTTCATGGTTAGAAGAGGTGGTTAGTTTTTGAGTTGTTTTTACTTTTGAGATGCTTTGGTTTGACTGAGAGAGAGAGAGACCTTCAAATGATAAAAGCTATTACTTTGTTTTGGGGTGTTAAGAGGACTAATACTAAAACTAGAATGGGCAGGGATTGATTTTGTACGAGAGGGGGTTAGTTTTTAGGTTGTTTCTTAGAACACAATGACATAATTGTACAACCTATGTACAACCTATAGTCTATAGAACAGATCCTCTTCGAGTAAGGTCGGAGGTTTTAGGTCGTTTCTTGGAGTTCCTAATGATAAAAGTTAGACCTAGTTCTTGGGATGCTGGATGGCTTATACAATATGATGGACAGAGGCTTAAGTATACAAGGTGGTTAGATTTAAGTTAATTTTATGGTGATGCTTTGATTTGGAGAAAGAGAGAGAGACAGACGACCTCCTAATGATATTTACTTCTTAGTTCTTGGGGTGCTAGTAAAGACTAATGCTAAAACAAGAATGGGCAGAGATTTACCTTAGTAGTGAAGGTGGTTAATTTTTTAAGTTAATTTTGTGGAGATGCTTCGATTTGGAGAGCAACAGAGCCCTATTCTAATAGGAGCCATGTCTTAGTTTTTGAAGTGGTGAGAGGATTATTACTAAAACTAGAATGAGTAGAGACTCATCGTAGTATATGAGGTGGTTGGTTTTTCTTAAGTTAATTTTTGGAGATGCTTTGATTTGTAGTTTGTAGGGAGAGTGACATCCAAATGATACAAATTATGCCTTCAATTTGCTAAGAAAATAATACTGAAGGGTCTACAAAAGCTCATTATATTTTATTAGTTCTGTATCACTGAGAATATAAAATTTCAAAAGCTTAAGTAGAATTCCCAAAGCTTCTACTTCGTACTGATGAATCAACTTCACCTCTGAACGTGCCCAATCTTATTTCTTATTCTACGTCACCCATCAGATAGTATTTGTGATACATTTTCAGGTACCGTTATTGGGGGAAAGAAAGTCCAGCTAGAGATAAACATAAATAACTAGAAAATCTTTTGAGAGATTATAAAATCCATAGGCCTCATTTCATCCTTACAATCTGTAATCATAGTCCTTTGTGTACTTCATGGTCAAGAAGCCTTTGGACATATGCATTCAAGTTGAGTTCATTATTTTCTAAATGATTTAGAAGTTATGGCTGTGTATAGAGACTCTAGAGACTATATTGGCGAATTTTCTCTTCTTATGGAGTTCTTATTATGGGATTTGATTTGAGACCCTTGTGCTATATTCCTTTGCTGGTAGAATTTGCTGTTAATTCAATATTTTTGTTTGAATCTAGATTAAGGGCCCTTCTGGTGAACATCTTCATGATTTCCGTGACAAGACTAGCGAAAAGCATGATTTTATTGCTCACAACAAAGGCCTTCATCGATTCTGCTTCACAAACAAGTCTCCATATCACGAAACCATCGACTTTGATGTGCACGTTGGCCACTTTTCTTACCACGAGCAGCATGCAAAAGATGGTAATATGTCATTTCCCTGTTTTATCTTGTGCTGATCTTATTTCATAAGTTAAAATCAATTTCAAAATTGGTGAATATGCCTGCAGAGCATTTCAACCCTTTGCTGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGATCGCCAGGCAATAGGTAATGTTGACTAACCTGTCTCGAACTCGAATAATTTCCATGACATCAGCTTTGGAATCTAATTTTTATGTTGAAGTTATTCCTTGATGTCATTGACATCAAGTAACTTCCAAATCTAAAAACATTGTCATTAATTAAGCGAACGCTGCAAAAAGAAGATTTAGGCATTGTTCAAGCACCAATGATCATGATAGTAGCTTTCTTCTTCATTATTCAAGCACCAACGATCATGTTAGATTTAGGGGCATAATGGCATTTTCTGGAAACTAGACTACTTGCATGTATAAGAGAATGATTTTTGAGGTCCTGTTTGATAACCATTTGAATTTTTGTTTGTGGTTTTTGAAAACTAAGCTTATATACACTACTTCCACTTATAAGTTTCTATGTTTTCTTATCCACTTTCTACAAATGTATTGAAAAATCAAACCAGAATGTGAAACCTCAAAATAAGCAGTTTAAAAAATGTGTTTGTTTTTTTAGAATTTGACTAGTTTTTCAAGATTGTCTTCTACAAGGTGAAAACCATTTCATTAAAGTGTGTGTATATATATATATATATATGTGAAAACCATAATTGAAAACATGAGAGGAAACAAGCCTAAATTTTAAACTAAAAACCAAATTATTATCAAATGGGGCCTTAGGTGTTGTTTGATGTTTGAGACCTTCAAATTCTTTTAAGAACAAAACAAAGGTTGAACAACAGAATGTCCTCAAAAGACCTTGGACTAATCTAACCCAGTTGAGGTGCTCAAATCACATCACGATGATAGCTCCAACCTAACCAAACTTATACGGTTCGGGTTGAGTTGATTGAGTTTGTTTTTCCTTTTGTACACTTTTAGTTTAGTCCATAGCAGATGGTTGCCTTTTAAGTTATCCATCTAAAAAACCTCCATAATCAGAACTTGGTCAGATTTTCCGTTCAATCTCGATTCTGGTTGTTTAACAGCTCTGCCGAACGAAAACCCGTCATGATGTATTTTGTGGTATGGTTTTGATTGCAGTGAATGATGGAATGAGCAAAAGAGCAATCCACAAGGCAATGTTTGAATCAGCAGCATTGGTAGGGGCCAGTGTCCTCCAAGTTTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGGACATCCAGAGTTTAA ATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGTTGGGGTATTGCTGTTGAATTTGAGAAAATCAGAAGGGATTAGGTTTGTGATAGACAGGGAAGAATGTTTCTCTCACAATGTTCAATACGAGGGAGATACTGTCCATGTTTCTTTTGTTGTAATCAAGGCAGATTCACCTTGGCACTATGGCGATGATGGAGTTGATCTTGTGATTAAGGGCCCTTCTGGTGAACATCTTCATGATTTCCGTGACAAGACTAGCGAAAAGCATGATTTTATTGCTCACAACAAAGGCCTTCATCGATTCTGCTTCACAAACAAGTCTCCATATCACGAAACCATCGACTTTGATGTGCACGTTGGCCACTTTTCTTACCACGAGCAGCATGCAAAAGATGAGCATTTCAACCCTTTGCTGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGATCGCCAGGCAATAGGTAATCTCTGCCGAACGAAAACCCGTCATGATGTATTTTGTGGTATGGTTTTGATTGCAGTGAATGATGGAATGAGCAAAAGAGCAATCCACAAGGCAATGTTTGAATCAGCAGCATTGGTAGGGGCCAGTGTCCTCCAAGTTTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGGACATCCAGAGTTTAA ATGGAGCGATGGGCTATGAGATGTGTGGTGATGATGGCGTTTGTTGGGGTATTGCTGTTGAATTTGAGAAAATCAGAAGGGATTAGGTTTGTGATAGACAGGGAAGAATGTTTCTCTCACAATGTTCAATACGAGGGAGATACTGTCCATGTTTCTTTTGTTGTAATCAAGGCAGATTCACCTTGGCACTATGGCGATGATGGAGTTGATCTTGTGATTAAGGGCCCTTCTGGTGAACATCTTCATGATTTCCGTGACAAGACTAGCGAAAAGCATGATTTTATTGCTCACAACAAAGGCCTTCATCGATTCTGCTTCACAAACAAGTCTCCATATCACGAAACCATCGACTTTGATGTGCACGTTGGCCACTTTTCTTACCACGAGCAGCATGCAAAAGATGAGCATTTCAACCCTTTGCTGGATCAAATATCTAAGTTGGAGGAAGCTCTTTACAATATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGATCGCCAGGCAATAGGTAATCTCTGCCGAACGAAAACCCGTCATGATGTATTTTGTGGTATGGTTTTGATTGCAGTGAATGATGGAATGAGCAAAAGAGCAATCCACAAGGCAATGTTTGAATCAGCAGCATTGGTAGGGGCCAGTGTCCTCCAAGTTTACTTGCTGCAGCGCTTGTTTGAAAGGAAGCTTGGGACATCCAGAGTTTAA MERWAMRCVVMMAFVGVLLLNLRKSEGIRFVIDREECFSHNVQYEGDTVHVSFVVIKADSPWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHDFIAHNKGLHRFCFTNKSPYHETIDFDVHVGHFSYHEQHAKDEHFNPLLDQISKLEEALYNIQFEQHWLEAQTDRQAIGNLCRTKTRHDVFCGMVLIAVNDGMSKRAIHKAMFESAALVGASVLQVYLLQRLFERKLGTSRV Homology
BLAST of CcUC02G020250 vs. NCBI nr
Match: XP_038887290.1 (transmembrane emp24 domain-containing protein p24beta2 [Benincasa hispida]) HSP 1 Score: 421.0 bits (1081), Expect = 6.7e-114 Identity = 211/234 (90.17%), Postives = 213/234 (91.03%), Query Frame = 0
BLAST of CcUC02G020250 vs. NCBI nr
Match: KAA0059209.1 (emp24/gp25L/p24 family protein [Cucumis melo var. makuwa] >TYK19311.1 emp24/gp25L/p24 family protein [Cucumis melo var. makuwa]) HSP 1 Score: 418.3 bits (1074), Expect = 4.3e-113 Identity = 209/234 (89.32%), Postives = 212/234 (90.60%), Query Frame = 0
BLAST of CcUC02G020250 vs. NCBI nr
Match: XP_004144551.1 (transmembrane emp24 domain-containing protein p24beta2 [Cucumis sativus] >KGN43402.1 hypothetical protein Csa_020232 [Cucumis sativus]) HSP 1 Score: 413.7 bits (1062), Expect = 1.1e-111 Identity = 206/234 (88.03%), Postives = 212/234 (90.60%), Query Frame = 0
BLAST of CcUC02G020250 vs. NCBI nr
Match: XP_023554617.1 (transmembrane emp24 domain-containing protein p24beta2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 410.2 bits (1053), Expect = 1.2e-110 Identity = 203/234 (86.75%), Postives = 209/234 (89.32%), Query Frame = 0
BLAST of CcUC02G020250 vs. NCBI nr
Match: KAG6572216.1 (Transmembrane emp24 domain-containing protein p24beta2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 410.2 bits (1053), Expect = 1.2e-110 Identity = 203/234 (86.75%), Postives = 209/234 (89.32%), Query Frame = 0
BLAST of CcUC02G020250 vs. ExPASy Swiss-Prot
Match: Q9S7M9 (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana OX=3702 GN=At3g07680 PE=1 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 5.7e-84 Identity = 150/217 (69.12%), Postives = 176/217 (81.11%), Query Frame = 0
BLAST of CcUC02G020250 vs. ExPASy Swiss-Prot
Match: Q9LIL4 (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.7e-25 Identity = 71/225 (31.56%), Postives = 114/225 (50.67%), Query Frame = 0
BLAST of CcUC02G020250 vs. ExPASy TrEMBL
Match: A0A5D3D6W7 (Emp24/gp25L/p24 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00310 PE=3 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 2.1e-113 Identity = 209/234 (89.32%), Postives = 212/234 (90.60%), Query Frame = 0
BLAST of CcUC02G020250 vs. ExPASy TrEMBL
Match: A0A0A0K541 (GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G031630 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 5.2e-112 Identity = 206/234 (88.03%), Postives = 212/234 (90.60%), Query Frame = 0
BLAST of CcUC02G020250 vs. ExPASy TrEMBL
Match: A0A6J1GLY5 (transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschata OX=3662 GN=LOC111455579 PE=3 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 2.8e-110 Identity = 202/234 (86.32%), Postives = 208/234 (88.89%), Query Frame = 0
BLAST of CcUC02G020250 vs. ExPASy TrEMBL
Match: A0A6J1HZG1 (transmembrane emp24 domain-containing protein p24beta2 OS=Cucurbita maxima OX=3661 GN=LOC111468315 PE=3 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.3e-110 Identity = 203/234 (86.75%), Postives = 208/234 (88.89%), Query Frame = 0
BLAST of CcUC02G020250 vs. ExPASy TrEMBL
Match: A0A6J1EKQ0 (transmembrane emp24 domain-containing protein p24beta2-like OS=Cucurbita moschata OX=3662 GN=LOC111435219 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.4e-109 Identity = 200/234 (85.47%), Postives = 208/234 (88.89%), Query Frame = 0
BLAST of CcUC02G020250 vs. TAIR 10
Match: AT3G07680.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 312.0 bits (798), Expect = 4.1e-85 Identity = 150/217 (69.12%), Postives = 176/217 (81.11%), Query Frame = 0
BLAST of CcUC02G020250 vs. TAIR 10
Match: AT3G22845.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 117.1 bits (292), Expect = 1.9e-26 Identity = 71/225 (31.56%), Postives = 114/225 (50.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|