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CcUC02G019680 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCCATTTTCACGTTGCACTTTCATCGGCAACAGTGTTTCGTTCCGATACTTTGAATTTCCATGGCGACGCCGGCAGTGAATGCTCCAGCAAAGAGGAAGCCTGTGTTCGTAAAAGTAGAAGAGCTTAAGCCTGGTACGAGCGGCCACACTCTCACGGTCAAGGTGGTGAGTTCGAAAAATGTGAAGGTTGTCAATAAAGGTGGACGATCCACCATGCTTACGGCTCGCCCTCAACAATTAACTCGAATCTCTGAATGTCTGGTGGGTGATGAGACCGGTTCCATCGTCTTCACAGCTCGAAACGACCAAGGTACGTTTCTCTATTACCTTAGAATGTTTAAAACCTTAAACTTTCTCATATTTTGGACGCATCCATGTACTTGGTGAGATGATTTTGTGTATGGTTGCGGAAAACGTTGGATAGAATGGATGGATATTAGTTTCCATTTCCTTGGATGTTTTGCTGTGATTGAGAATTCTTTTGGAACAGTGAGTTTTCTTTTTTGTTTGTGAATTTTGTCTTTGTTCCGCGTGAATTAAGGATTATTCTCTATAGGTTTTTTTAAAACCAGTAGTAGAAACTTGTCCTTGATAATTGAGCAGATACTATATAGACTTAAAACTCTCCTTTGAGGGTGTCATCCTGTTATATAATTAGAAAAAGGTGCCCCAACAAAAATTTATTTGAGCCACCCTGGATATTTCGTTCCGTGAATTAGGTTTTTAATGGCTATTTTCTGACATAAATAGAATTTGGATGTTGAGATAATTGTATAACAAGGAGTGTTTTCACAATCGATCATTGAGATTCAAGAACACTTGAAAATGGTTTTAACAAGGTCTGGAATAGAAATTCTTTTTGGGCAACACACTTGGGTCTTTTTGGATTGACTCTCTAAATGCTTAAAATTGATTTTTTAATAAACACCCAGAAACACTTTTTTAAACACCTAGAGAATTGACTCTTATATGCAATAAAGGTGCAAAGAGAAGTACATTGTGGGAAACAGAATGCAAAGAATTATTTTAGGATTGGATATCTTTCCTATGAGCTCGTGAAAGGATCCTTAAGGGCAGTTAGTGTGTGAGATTTTTTGGTGTGTGACAGAATGCAAAGAATTATTTTAGGATTGGATATCTTTCCTTTTAGCTCTTGAAAGGATCCTTAAGGACAGTTAGTGTGTGAGTTTTTTTGGTCTTTAGTGTGTGAGTGTTTTTGGTCTGTGAGAGTGATTTTACTGGTCAGGATAGTTCGTCTTTTATGTTCATCTCTTTTAAATCTGGACTGTTGAGATGGCAGATTGAGGTTTGTGGGTGTAGACATTTTTTCGTCTCCCTGTGAATGTTGCTTTTGATTTGAAATCTGTTGTCAATTTAACTGTGTAGCAGTTTCTTTATCTATTGCCTTCAATCCAGCGATTAATATCTTTTGTGTCTGCTTGGTATTAAGAACCTATTGCTGTGTGTCGTGCATATCATAGGTGGTGGCAGTGATCTTCAATTCTTACTCAACCCCGCCCTCCTCCTAATATATAAATAGTTGATGCTCATGGTGCTCTATTATCTGAACAAATGGTTGTAATTTTTGCAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTGCGGAATGCAAAGATTGACATGTTCAAAGGGTCAATGAGGTTAGCAGTAGATAAATGGGGACGAGTTGAAGTTGCAGAACCAGCCAACTTCGAGGTTAAAGAGGACAACAATCTCTCACTGGTTGAATATGAATTGGTTAACGTTGAAGAATGAGATCGAATTATGCAATGTTAATTATCATGGATTTACTTTCCTATTGTGTGGTGGACTGCTATTTAACTGGTATACAGTTTCTATATGGCAACACAAATCTTGCTGAGGGTAATATAAGT TCTCCATTTTCACGTTGCACTTTCATCGGCAACAGTGTTTCGTTCCGATACTTTGAATTTCCATGGCGACGCCGGCAGTGAATGCTCCAGCAAAGAGGAAGCCTGTGTTCGTAAAAGTAGAAGAGCTTAAGCCTGGTACGAGCGGCCACACTCTCACGGTCAAGGTGGTGAGTTCGAAAAATGTGAAGGTTGTCAATAAAGGTGGACGATCCACCATGCTTACGGCTCGCCCTCAACAATTAACTCGAATCTCTGAATGTCTGGTGGGTGATGAGACCGGTTCCATCGTCTTCACAGCTCGAAACGACCAAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTGCGGAATGCAAAGATTGACATGTTCAAAGGGTCAATGAGGTTAGCAGTAGATAAATGGGGACGAGTTGAAGTTGCAGAACCAGCCAACTTCGAGGTTAAAGAGGACAACAATCTCTCACTGGTTGAATATGAATTGGTTAACGTTGAAGAATGAGATCGAATTATGCAATGTTAATTATCATGGATTTACTTTCCTATTGTGTGGTGGACTGCTATTTAACTGGTATACAGTTTCTATATGGCAACACAAATCTTGCTGAGGGTAATATAAGT ATGGCGACGCCGGCAGTGAATGCTCCAGCAAAGAGGAAGCCTGTGTTCGTAAAAGTAGAAGAGCTTAAGCCTGGTACGAGCGGCCACACTCTCACGGTCAAGGTGGTGAGTTCGAAAAATGTGAAGGTTGTCAATAAAGGTGGACGATCCACCATGCTTACGGCTCGCCCTCAACAATTAACTCGAATCTCTGAATGTCTGGTGGGTGATGAGACCGGTTCCATCGTCTTCACAGCTCGAAACGACCAAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTGCGGAATGCAAAGATTGACATGTTCAAAGGGTCAATGAGGTTAGCAGTAGATAAATGGGGACGAGTTGAAGTTGCAGAACCAGCCAACTTCGAGGTTAAAGAGGACAACAATCTCTCACTGGTTGAATATGAATTGGTTAACGTTGAAGAATGA MATPAVNAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE Homology
BLAST of CcUC02G019680 vs. NCBI nr
Match: XP_038887250.1 (uncharacterized protein At4g28440-like [Benincasa hispida]) HSP 1 Score: 282.3 bits (721), Expect = 2.3e-72 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CcUC02G019680 vs. NCBI nr
Match: XP_008455497.1 (PREDICTED: uncharacterized protein At4g28440 [Cucumis melo] >KAA0059117.1 uncharacterized protein E6C27_scaffold430G00240 [Cucumis melo var. makuwa] >TYK21622.1 uncharacterized protein E5676_scaffold150G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 280.8 bits (717), Expect = 6.7e-72 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of CcUC02G019680 vs. NCBI nr
Match: XP_004144523.1 (uncharacterized protein At4g28440 [Cucumis sativus] >KGN43465.1 hypothetical protein Csa_020344 [Cucumis sativus]) HSP 1 Score: 278.5 bits (711), Expect = 3.3e-71 Identity = 142/145 (97.93%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of CcUC02G019680 vs. NCBI nr
Match: XP_022136009.1 (uncharacterized protein At4g28440-like [Momordica charantia]) HSP 1 Score: 273.1 bits (697), Expect = 1.4e-69 Identity = 139/145 (95.86%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of CcUC02G019680 vs. NCBI nr
Match: XP_022988994.1 (uncharacterized protein At4g28440-like [Cucurbita maxima] >XP_023529810.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo] >KAG7022832.1 hypothetical protein SDJN02_16568 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 271.6 bits (693), Expect = 4.1e-69 Identity = 137/145 (94.48%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of CcUC02G019680 vs. ExPASy Swiss-Prot
Match: O49453 (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 PE=1 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.2e-46 Identity = 92/133 (69.17%), Postives = 108/133 (81.20%), Query Frame = 0
BLAST of CcUC02G019680 vs. ExPASy Swiss-Prot
Match: Q97W73 (Single-stranded DNA binding protein Ssb OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=ssb PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 8.1e-04 Identity = 32/109 (29.36%), Postives = 46/109 (42.20%), Query Frame = 0
BLAST of CcUC02G019680 vs. ExPASy TrEMBL
Match: A0A5A7UWS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00200 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 3.2e-72 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of CcUC02G019680 vs. ExPASy TrEMBL
Match: A0A1S3C119 (uncharacterized protein At4g28440 OS=Cucumis melo OX=3656 GN=LOC103495649 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 3.2e-72 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of CcUC02G019680 vs. ExPASy TrEMBL
Match: A0A0A0K1C6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038160 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71 Identity = 142/145 (97.93%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of CcUC02G019680 vs. ExPASy TrEMBL
Match: A0A6J1C327 (uncharacterized protein At4g28440-like OS=Momordica charantia OX=3673 GN=LOC111007815 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 6.7e-70 Identity = 139/145 (95.86%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of CcUC02G019680 vs. ExPASy TrEMBL
Match: A0A6J1JN47 (uncharacterized protein At4g28440-like OS=Cucurbita maxima OX=3661 GN=LOC111486189 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 2.0e-69 Identity = 137/145 (94.48%), Postives = 143/145 (98.62%), Query Frame = 0
BLAST of CcUC02G019680 vs. TAIR 10
Match: AT4G28440.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 186.4 bits (472), Expect = 1.6e-47 Identity = 92/133 (69.17%), Postives = 108/133 (81.20%), Query Frame = 0
BLAST of CcUC02G019680 vs. TAIR 10
Match: AT2G33845.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 185.3 bits (469), Expect = 3.6e-47 Identity = 98/135 (72.59%), Postives = 109/135 (80.74%), Query Frame = 0
BLAST of CcUC02G019680 vs. TAIR 10
Match: AT1G23750.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 178.7 bits (452), Expect = 3.3e-45 Identity = 93/134 (69.40%), Postives = 111/134 (82.84%), Query Frame = 0
BLAST of CcUC02G019680 vs. TAIR 10
Match: AT1G10590.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 172.9 bits (437), Expect = 1.8e-43 Identity = 93/136 (68.38%), Postives = 110/136 (80.88%), Query Frame = 0
BLAST of CcUC02G019680 vs. TAIR 10
Match: AT1G10590.3 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 172.9 bits (437), Expect = 1.8e-43 Identity = 93/136 (68.38%), Postives = 110/136 (80.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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