![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC02G018460 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGTTAAAAAGAGGCCTTCCTCAGGAATATTGATATAGCAATTGAATTGAGAGACAAACACAAACTCACATTTCGTGAATAAAGCCTGCAAACGATTTTCTCTTCTGCAAAATCTCCATTTCTTCTGCCCTTTCATATTCTTTCTTCTTTCCTCCGATTATCTCATTGCACATGGCTTTTGAATCACAGGTCTTGATGTAATCATTTTCCCCATCTTCTTTTTACAACCCAATTTCCCTTTCTCTAAAAACCCCTCCATTCTCTGCAACTATGACCCTTTGCCATTATTAGAAGTTCTAGCACGAGAGCGCGAAAACAGAGTGGGTTTTTTTCTGTTATTACTCAACTGGGGTTTTGTTTTAATGGGAGGTGAGCAAAAATGGGGAGCTATAGCGCCCGCGTTGCCGGCGGTGTCACCGTTAAACCCAGAAAGAGAAGAGTATTGGAGCCGTTTTGATGATTCGGTTAATGCGGTTTCGTTTGGGTTTGTAGCTACTGCCATTCTCATCTCTATGTTCCTTGTTATGGCAATTTTTGAGAGGTTTCTAAGACCCAGGTCGCCGCCGGCCATCGGACGGCCACCTTCTGATCTTGAAGCTCAGATGGTGTTTGATGGAAAGCCTCGTTACCCTTCTCCTAAGGTTTTTGTCTTCTCTTCTTTTCTTCAACTGCATTCTAATGGTGGCCTGCATTTTGCTTGCTCTTCAAAATTTTGATTCTTGTGTTTTTTTAGTGTTTTGTTTTCAGTTTTCTTTTAATTGATTAAAGGCTTGATGGGTAAGTTGTGAAGATAATTTGTTTTTGTAAATGATTTCATTATCTTCAAGAATAATGGCATAGCTTGTTGTCAGTTAGTTCTTCTAGTGGGCTGAATTATTGGTCTAACTAATTATGAGCTGTTTTGTTGTATTTTCACATATAAGCATGAAACTCTTTTGAACTTTTAAGACACTGGAAATCATATTCTCCACCATTTTACAACATTGCAAGTCTATTTGTGTATGATCTTTTGAATAAATGAATCCCATGCCATTTTTCTTAAGCTTTAGAGTTGTAGGTGTTGTATAATATCTGTTTGTTATGGAAGTTTGTTGTGGGGCCTTAGAGTTATAATCTGATGGGGTTACTAATCTCGAGATTCTAATTTAAATGGCTTCTGCTTTATTTTAGAAACGATATTTGTTCTCTAGGTTATAAGATCATGACAATAGTTTTTGGAAAATACTTAGGTGCATCTCCAATAATACCTATTTTCGTGCATTCCACCAAGTCCAATCATAATTTGCCACATGACAAATTCTTCTTACTTTTATTTTAAGAGCAATTAAACTCCATCTAATCCATGCTCCACTTTTCTTTTCACACAACAAAAAGAGTCTAGGGAGCACTTAATTATTTCTCATGGGATGCATAAAATGGGTAAAATGGATACATTTGCAATGTACTCAAGTATTGTCTGTAGGTTTTTTTTTTTTTTTTTTTTTTTCTTGCCAAAACCCATCCTTAAAAGGATCACTTTTTTTTTTTTGTTTTTAAAATAATAATAATAATAATAATAAATTCTTTTGTTGACAATTAATAATCTTTAAACTATCTTCAAACAGTTCTCTTCTGAAAATTTCTATATTACCTCTGTTTGTTAACATTAACACAATAGTTTTCCTCATTCTAGATTTTAAGGATAAGGGTCCACAGCATGTAGGTAGCATGTGTTTTTGTCTCAACTGTTATAGCAATCCAACCACAATCAAATTTTGATAGGCAAAACAGATCCAAAAGGCTTTAAAATGAACAAGCTGCTCTTAATTTTTTATAGCATTAGTCGCTTGTGAAGCTGTGCCAGATGACATTTTAAAAAGAACAGATTATTCAAAGTTATCTCAATGTAACAAACTTTGTCAACAATTTGATCCTACACCATTAAATGCATTGTTCATATCAAGCAAGATATAGCACAACTGTTCATAAGCCTTTTAAGTGCAGTAGCAAGTTAATTACAAACATAATCACATGCTATGTTTCCCTTTCTGATTACACTATAGTAATGTGCATATATTTTTAAGTATTTCTTTTAGCTTTATAAAGTGTCTTAAAGTCTCAGCTGGCACTATTTTCAATATCTTTCCTACATTCTATGAGGTATACTTGTACCATACCAACATGTACAGCTGAGTTTGGTTGAGATTTGAGTAATACTTTCAATTTTATTGTGTTGGGAAAAATACTAGCAGAGTAGAAGGGTATTGAAATAGGAGGTCCTGGATTATTCAGAATCTACTTCCACTAGTTTGTGTCCTATTCTTGCATCTCAAGTATGATAAAGTTGTCTTCCTTTTTGCTTATAGGCCAGCTATTTTCAACTGAAAATTAGAATGGTGATCATTATTATGAGTTTTCTTTCTTGTTTGAGGACATTTGCTTTTAGTGACCATCATGTTTGATCATGTGGCTTATCTTTCTCTTCATAAGGGGAAAGAAAGGCAAAAGAAAAAGGGAAAAAAGGTTCAGACAAGCATTAATGTTCCATTGGAGTGAGGTTTTGATTCATCTATCTTTTAATCAAATTTATAATTTATACTGTTCAATCAGCAGTGGCTGTACAGTGTTCAAGTCAAATCTCTCTCTCTCTCTCGCTCTCTCTCTCTCTCTGATGAACAACATGCTACAGAACTCTCATGCAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTAAACAAAGTCTTTTCCATATTTCTTCAGAAGTTTTTAAGTTTTAAAATATTTATTTATTTATAAAATGTATATGTTAAAAAGAAAAAAGAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAGAAACCCTTCTTTATTGCGTCTGTCAAACATGCTTAATCATTCTTGGACGATGACCTTTTGCACCATTGCTGCTGAAATCTTGCAGCATTCCCAGAACACCATGATATTAGTAGCTAGATGATTCCTGTAATGAAATATATTTCTACTGATAATTAGAGGAGTAGCAGAGAAGCAAAGTTTAGTTTTATTCTGTACCATTGGGATTGACTGGTTCATTCTTTTTTACTTGATTTATGTAGATGACGGTTTATGCTCGGGGAGTGTCCGTATTGATGCCGGGTGAAGAAATTCCAACCTACATTGCTCACCCTGCTCCTGCACCTTGTCCTCCAGAACCCATTTTGAAGCCTCTGCATCAACATAGCTTGAGCATCTGTCCATCATCAAGCTTAACATCAAGCTCCAACATCAGTTGACCTGAAAAATAACATCACTATAGAACAAGGGTCACCCACTCTTGGAATTTCAGCTTATTCTGACTTGCAACTTGACATTCTAAAGTTGGAAAACATGGTGAAAGTCACATCAACATCAGTCTCTAACTTCAATATGTAGAGAGGCCCTTTAGGTTATATTTGATGATGTTGATTTGGGCCTTCTCTGGCCCCCACCAAATTAAAGAGAGGATGAAAATGAATGATTGTTGCAAGCTGGGTCAGCTCCTGTAATCCATGATTAGTACCCTGATTGTTATGTTCATAATGA ACGTTAAAAAGAGGCCTTCCTCAGGAATATTGATATAGCAATTGAATTGAGAGACAAACACAAACTCACATTTCGTGAATAAAGCCTGCAAACGATTTTCTCTTCTGCAAAATCTCCATTTCTTCTGCCCTTTCATATTCTTTCTTCTTTCCTCCGATTATCTCATTGCACATGGCTTTTGAATCACAGGTCTTGATGTAATCATTTTCCCCATCTTCTTTTTACAACCCAATTTCCCTTTCTCTAAAAACCCCTCCATTCTCTGCAACTATGACCCTTTGCCATTATTAGAAGTTCTAGCACGAGAGCGCGAAAACAGAGTGGGTTTTTTTCTGTTATTACTCAACTGGGGTTTTGTTTTAATGGGAGGTGAGCAAAAATGGGGAGCTATAGCGCCCGCGTTGCCGGCGGTGTCACCGTTAAACCCAGAAAGAGAAGAGTATTGGAGCCGTTTTGATGATTCGGTTAATGCGGTTTCGTTTGGGTTTGTAGCTACTGCCATTCTCATCTCTATGTTCCTTGTTATGGCAATTTTTGAGAGGTTTCTAAGACCCAGGTCGCCGCCGGCCATCGGACGGCCACCTTCTGATCTTGAAGCTCAGATGGTGTTTGATGGAAAGCCTCGTTACCCTTCTCCTAAGATGACGGTTTATGCTCGGGGAGTGTCCGTATTGATGCCGGGTGAAGAAATTCCAACCTACATTGCTCACCCTGCTCCTGCACCTTGTCCTCCAGAACCCATTTTGAAGCCTCTGCATCAACATAGCTTGAGCATCTGTCCATCATCAAGCTTAACATCAAGCTCCAACATCAGTTGACCTGAAAAATAACATCACTATAGAACAAGGGTCACCCACTCTTGGAATTTCAGCTTATTCTGACTTGCAACTTGACATTCTAAAGTTGGAAAACATGGTGAAAGTCACATCAACATCAGTCTCTAACTTCAATATGTAGAGAGGCCCTTTAGGTTATATTTGATGATGTTGATTTGGGCCTTCTCTGGCCCCCACCAAATTAAAGAGAGGATGAAAATGAATGATTGTTGCAAGCTGGGTCAGCTCCTGTAATCCATGATTAGTACCCTGATTGTTATGTTCATAATGA ATGGGAGGTGAGCAAAAATGGGGAGCTATAGCGCCCGCGTTGCCGGCGGTGTCACCGTTAAACCCAGAAAGAGAAGAGTATTGGAGCCGTTTTGATGATTCGGTTAATGCGGTTTCGTTTGGGTTTGTAGCTACTGCCATTCTCATCTCTATGTTCCTTGTTATGGCAATTTTTGAGAGGTTTCTAAGACCCAGGTCGCCGCCGGCCATCGGACGGCCACCTTCTGATCTTGAAGCTCAGATGGTGTTTGATGGAAAGCCTCGTTACCCTTCTCCTAAGATGACGGTTTATGCTCGGGGAGTGTCCGTATTGATGCCGGGTGAAGAAATTCCAACCTACATTGCTCACCCTGCTCCTGCACCTTGTCCTCCAGAACCCATTTTGAAGCCTCTGCATCAACATAGCTTGAGCATCTGTCCATCATCAAGCTTAACATCAAGCTCCAACATCAGTTGA MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRSPPAIGRPPSDLEAQMVFDGKPRYPSPKMTVYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHSLSICPSSSLTSSSNIS Homology
BLAST of CcUC02G018460 vs. NCBI nr
Match: XP_004137014.1 (uncharacterized protein LOC101213979 [Cucumis sativus] >KGN43593.1 hypothetical protein Csa_020298 [Cucumis sativus]) HSP 1 Score: 301.2 bits (770), Expect = 5.0e-78 Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of CcUC02G018460 vs. NCBI nr
Match: XP_038887855.1 (uncharacterized protein LOC120077851 [Benincasa hispida]) HSP 1 Score: 297.7 bits (761), Expect = 5.5e-77 Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 0
BLAST of CcUC02G018460 vs. NCBI nr
Match: KAA0031590.1 (uncharacterized protein E6C27_scaffold139G003580 [Cucumis melo var. makuwa] >TYK07042.1 uncharacterized protein E5676_scaffold13G003600 [Cucumis melo var. makuwa]) HSP 1 Score: 289.7 bits (740), Expect = 1.5e-74 Identity = 145/151 (96.03%), Postives = 146/151 (96.69%), Query Frame = 0
BLAST of CcUC02G018460 vs. NCBI nr
Match: XP_023554632.1 (uncharacterized protein LOC111811824 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 283.9 bits (725), Expect = 8.2e-73 Identity = 139/151 (92.05%), Postives = 146/151 (96.69%), Query Frame = 0
BLAST of CcUC02G018460 vs. NCBI nr
Match: XP_022952119.1 (uncharacterized protein LOC111454885 isoform X1 [Cucurbita moschata]) HSP 1 Score: 282.0 bits (720), Expect = 3.1e-72 Identity = 138/151 (91.39%), Postives = 145/151 (96.03%), Query Frame = 0
BLAST of CcUC02G018460 vs. ExPASy TrEMBL
Match: A0A0A0K2A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047290 PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.4e-78 Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of CcUC02G018460 vs. ExPASy TrEMBL
Match: A0A5D3C6W5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003600 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 7.3e-75 Identity = 145/151 (96.03%), Postives = 146/151 (96.69%), Query Frame = 0
BLAST of CcUC02G018460 vs. ExPASy TrEMBL
Match: A0A6J1GKP8 (uncharacterized protein LOC111454885 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454885 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72 Identity = 138/151 (91.39%), Postives = 145/151 (96.03%), Query Frame = 0
BLAST of CcUC02G018460 vs. ExPASy TrEMBL
Match: A0A6J1HXD4 (uncharacterized protein LOC111468338 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468338 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 7.5e-72 Identity = 137/151 (90.73%), Postives = 144/151 (95.36%), Query Frame = 0
BLAST of CcUC02G018460 vs. ExPASy TrEMBL
Match: A0A6J1D2M5 (uncharacterized protein LOC111016735 OS=Momordica charantia OX=3673 GN=LOC111016735 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71 Identity = 140/151 (92.72%), Postives = 144/151 (95.36%), Query Frame = 0
BLAST of CcUC02G018460 vs. TAIR 10
Match: AT1G11120.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 140.6 bits (353), Expect = 1.0e-33 Identity = 81/139 (58.27%), Postives = 98/139 (70.50%), Query Frame = 0
BLAST of CcUC02G018460 vs. TAIR 10
Match: AT1G11120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 270 Blast hits to 255 proteins in 62 species: Archae - 0; Bacteria - 2; Metazoa - 93; Fungi - 14; Plants - 126; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). ) HSP 1 Score: 126.3 bits (316), Expect = 2.0e-29 Identity = 81/165 (49.09%), Postives = 98/165 (59.39%), Query Frame = 0
BLAST of CcUC02G018460 vs. TAIR 10
Match: AT4G28170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11120.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 8.9e-17 Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of CcUC02G018460 vs. TAIR 10
Match: AT1G09812.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58007.2); Has 93 Blast hits to 93 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.0 bits (201), Expect = 4.4e-16 Identity = 57/119 (47.90%), Postives = 68/119 (57.14%), Query Frame = 0
BLAST of CcUC02G018460 vs. TAIR 10
Match: AT1G58007.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 91 Blast hits to 91 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 3.9e-12 Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|