CcUC02G017670 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCATTCTCCTCCCTCCTCGAAAGCACCCTGTTTTTCTAAAAGTTAAAAAATAAATAAAATAAAACAGTTAGAAGCCATTTTCGACCCGTCGTTTCTAGAGTTGTGTGTTGGGACGACTTGTCGTAGAAGAAGTTTGAAGAAGAAGGATAAGGTTTGAAAGTTTGAAGGAATAATAATGGGAAGCATTGATAGAAAATCATCTATTGAAAATGAGCCAAGGACTCTCAAAATGCATCAAATCCAATTTGCAAGAGTAAGTCTAATCTCTATTTTTTGTTTTTTCACTATTTGATTACTTGCTTTAAATTTTATTTTCTCTGGAGAGAAAGGAAGAGATTTTGTTGAAGAAAAAGATTGAATTTGTGTTATAACTCATTTTTAATTATTAGATTTTTCTGATGAATTTGGATAATTATTTCAGGAAGCAGCACTTTATGTGATGAACACAACCACCATAGAAGAAGCAATGAAGATTTTCACAGAGGTAAATATTAGCTAGAAATACAAATCTTTTTCTAATTACCAACTTACCCTATGACTGTAGTATTCATGAATTAAATGGTCATGATATGATGTGGAAAATAATGTAGGGATTACAAACAGTGGAATGTAAAGCAATTGAAGATAAAGATTCAATAATGGAAAATTGGTGCCATGAAGAAGAAGTTGATGAGTTACAACCTCTGTATCAACTTAGAGACATTGTCTCTGCCCCTTTTTAGTCTACCCTTTTTTTT ATTTCATTCTCCTCCCTCCTCGAAAGCACCCTGTTTTTCTAAAAGTTAAAAAATAAATAAAATAAAACAGTTAGAAGCCATTTTCGACCCGTCGTTTCTAGAGTTGTGTGTTGGGACGACTTGTCGTAGAAGAAGTTTGAAGAAGAAGGATAAGGTTTGAAAGTTTGAAGGAATAATAATGGGAAGCATTGATAGAAAATCATCTATTGAAAATGAGCCAAGGACTCTCAAAATGCATCAAATCCAATTTGCAAGAGAAGCAGCACTTTATGTGATGAACACAACCACCATAGAAGAAGCAATGAAGATTTTCACAGAGGGATTACAAACAGTGGAATGTAAAGCAATTGAAGATAAAGATTCAATAATGGAAAATTGGTGCCATGAAGAAGAAGTTGATGAGTTACAACCTCTGTATCAACTTAGAGACATTGTCTCTGCCCCTTTTTAGTCTACCCTTTTTTTT ATGGGAAGCATTGATAGAAAATCATCTATTGAAAATGAGCCAAGGACTCTCAAAATGCATCAAATCCAATTTGCAAGAGAAGCAGCACTTTATGTGATGAACACAACCACCATAGAAGAAGCAATGAAGATTTTCACAGAGGGATTACAAACAGTGGAATGTAAAGCAATTGAAGATAAAGATTCAATAATGGAAAATTGGTGCCATGAAGAAGAAGTTGATGAGTTACAACCTCTGTATCAACTTAGAGACATTGTCTCTGCCCCTTTTTAG MGSIDRKSSIENEPRTLKMHQIQFAREAALYVMNTTTIEEAMKIFTEGLQTVECKAIEDKDSIMENWCHEEEVDELQPLYQLRDIVSAPF Homology
BLAST of CcUC02G017670 vs. NCBI nr
Match: XP_011649401.1 (uncharacterized protein LOC105434623 [Cucumis sativus] >KGN62156.1 hypothetical protein Csa_006615 [Cucumis sativus]) HSP 1 Score: 158.3 bits (399), Expect = 3.1e-35 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of CcUC02G017670 vs. NCBI nr
Match: XP_008460897.1 (PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo]) HSP 1 Score: 157.1 bits (396), Expect = 6.9e-35 Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of CcUC02G017670 vs. NCBI nr
Match: XP_038902606.1 (uncharacterized protein LOC120089256 [Benincasa hispida]) HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34 Identity = 79/90 (87.78%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of CcUC02G017670 vs. NCBI nr
Match: KAG6605318.1 (hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035274.1 hypothetical protein SDJN02_02069 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149.1 bits (375), Expect = 1.9e-32 Identity = 74/90 (82.22%), Postives = 82/90 (91.11%), Query Frame = 0
BLAST of CcUC02G017670 vs. NCBI nr
Match: XP_023512402.1 (uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo] >KAG7011119.1 hypothetical protein SDJN02_27917, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 148.3 bits (373), Expect = 3.2e-32 Identity = 74/91 (81.32%), Postives = 83/91 (91.21%), Query Frame = 0
BLAST of CcUC02G017670 vs. ExPASy TrEMBL
Match: A0A0A0LQ89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302230 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.5e-35 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of CcUC02G017670 vs. ExPASy TrEMBL
Match: A0A1S3CDH2 (uncharacterized protein LOC103499638 OS=Cucumis melo OX=3656 GN=LOC103499638 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.3e-35 Identity = 80/92 (86.96%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of CcUC02G017670 vs. ExPASy TrEMBL
Match: A0A6J1G887 (uncharacterized protein LOC111451648 OS=Cucurbita moschata OX=3662 GN=LOC111451648 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31 Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 0
BLAST of CcUC02G017670 vs. ExPASy TrEMBL
Match: A0A6J1DBC1 (uncharacterized protein LOC111018915 OS=Momordica charantia OX=3673 GN=LOC111018915 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27 Identity = 66/92 (71.74%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of CcUC02G017670 vs. ExPASy TrEMBL
Match: A0A1R3GDT9 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35729 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.8e-15 Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of CcUC02G017670 vs. TAIR 10
Match: AT4G33467.1 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 6.3e-10 Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 0
BLAST of CcUC02G017670 vs. TAIR 10
Match: AT4G33467.2 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-09 Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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