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CcUC02G017550 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTATTATTGTTGTTTTTGTTGTTATTTTTGATTTGTTAAATGGAAGCCATCAGTGGAAATAGCTTCAACTTATTGCCTCCTGGTCTCAGATTCTGCCCAACAGATGAAGATCTTGTGCTTCACTTTCTCTATCACAAAGCTTCTATCTCTTCTACTCACAATTTTTCCAATTCCATCATTCCTCAGCTTCAAGTTCATCTCTATAACCCTTGGCAATTCCATGGTATAATATAATATCTCTCTCTCTCCTTTTTCTTCTCCCTTTAAATTTACCCTAAAACATTTTGGATATAGTGTGTGAACAATAATAGCATATAATAAGAGCTCGTGTAAATTAAAGCTGTTGGGTTGCTTGGTGAATAATCAGAGTATGAGATCTTACATTCGAATCTCGGCGGTTATAATATCTTTTCCTCTACCGTAAGTATTAATTTTCCACTTGTTTGAATCTTCTTAAAGTTGACTTTAAAAGTTAAAAGACTTGGCTAAGTGAATTTGGTCTCTGGATTTTGAGTTTAGTTTCTATTCCGCACTCACGCACTTGTTATACTAAAAAAAATTAAAAAGTATAGGGTTTAAAAGTATTGAAATTATTGAATTTAGAATAAACTATATTTTTAGTCCCTGAGTTTTGAGTTTAGTTTAAGTTTTAAAATGTAATCTTTAGATTTAGAGTTTTATTTCAATTTGGTCCCTAAGTAAAATGTTACAATTTTACTTTTGAAGTTTCAATTTGGTTGTTGAGTTTTAAGATTTTATACTTTTAATCTTGATTTTTTATTAAATATATACTCACTCTCACAGTTTACTGTTAATATCTATTAATTAATTTTTAAAAAACCTAAAAGAATTATAATTAATTAAATTTCACTATTTTTCCATCCATATTAAAATTATTTTTAAAATTTCACTTCATAACTATTTGAAATTAGGTAATAGACATTTACGCCCAGATTGAAACGAAGAGTAGTGAATGAAAAATTGAAGTTATAAAATATAAATCTTGAAATTTTAGAGACCAAATTGAAACAAAGCTCAAAACTTACCGACTCAAAAGTATAACTTTATGAAACTAAGACCAAACAACTACTTTTGCCTTAAATTTAGGTATTAAGTTAAACTACTTTTTTTTTTTTTTTTTTTTTTTTTTGGNCAAATTGAAACAAAGCTCAAAACTTACCGACTCAAAAGTATAACTTTATGAAACTAAGACCAAACAACTACTTTTGCCTTAAATTTAGGTATTAAGTTAAACTACTTTTTTTTTTTTTTTTTTTTTTGTTTGGACAGGGAAAGCGCTTTCAAATGGGGAGATTCACTACTTTTTCAGCAAAGTGGGAGAAAGTAGAGCAACAGAGAGTGGATATTGGAAAGATGTTTCAATGGATGAGAAAATCTTGTGTAGTGGCAATGGAAATGAAGTGGGAATAAAAAAGTATCATATTTTCTTTGTTGGTGAAGAAGATGACTCATCAACAGCCATTCAAACAAGTTGGGTCATGCATGAGTATCACATCTCTACCTACCTTTTCAACAACCATCCTCCATCTCAAAACAACTGCAATACATCACATACAAAATCAGTAAGTCAAACAACTTACCTTAACAATCTTGTTTCTCTCTTCCATTTAAGTTCTAAACTTCTTCTAATGTCGACAGGTAAATTTTATGTTTACTTGAACTATGTTTACTCGTAGATACGCTAGGTAGTTGAACTAAAACCTAATTAAATTGAAATACGTACGTGAAAATACTTGTTTTCGTTCTATTATATTATCGAACACATTTTATTTTTTTCTTCTAGATTTCACACTTTTACTCGTCTTCAGTATTTTCGTTAACTTTCAATTTATTAATTAAAAACAATTATGATGCAGTTTTTTTCAACTAATTCTACTAGTGACTGCGAATTATGAAAACAAAATTATTTACTTTAAGCGAATTAATATAAATGGTTGTTTTCAAATATAGTAAAATGAGCCAAAATATTTACAAATATATAGCAAAATGTCAATTCTATCACTGATAGACTACTATCATCTATCATTGTCTATTAGTGATAGACATTAATAGATGTTTACCGATGTCTATCGTTATTTATCATTGATAGACAGTGACATTTTGCTATATATTTGTAAATATTTCTAGTAGTTTTGTCATTTAAAACAATTAACTTAATATAAAATTAACACAAATAACAAAAGTTGTCATTACTTAAATCGAATCATGTAACAAATCAGTACAAACAAAACTCAAAATTTTGGATAAAAATATAATATTTCGAAATTCACGGGCCATATGAAATCATTATCGAAACTCAAGGGAAAAAAAAAGTATTTTACTTCTTTTTGATCTTTCTTATTTAATTTCTTTACTTTACAAGAAATGAGGAATATGTCTCGTGACCCTTTCTTATTTCTTGTTTTCCAAAGTGAAAGTAGAAAGGTATTTATAAGTATTTTTGAAATTGGAAATAAATAATTAAACTCTATTCTAATAATTTGTTGGTTAATAGTTAAACCATCAAACTTGGCCTTAAAAGGTAATTTAAAAATTACATTAGAATATGTCAAATAAAGGTTCGAACATTATAATGTATAAAAATGAAAATAATGAGAAAAAGAAAATTAGAAAATGAATTAATGTATAATGATATGTTATTTTCATCTGCAGTAAAAATAGTTAGAGAGTAAATTAGTTGTATTTAATTTATTGTTGCGATTTGAACAGGAGTTTGGATTATGGGTTCTGTGTCGAGTTTTTGAAGCAAAAGACAATACTGGAAGAAGTATGTTTAATTACGAGGAAGATGGTGATAATGAAAGTGAACTTTCATATTTGGATGAAATGTATTTGACAATATTAGAGGATATTTGAATTTCCAATCTTAATTAAA TATTATTATTGTTGTTTTTGTTGTTATTTTTGATTTGTTAAATGGAAGCCATCAGTGGAAATAGCTTCAACTTATTGCCTCCTGGTCTCAGATTCTGCCCAACAGATGAAGATCTTGTGCTTCACTTTCTCTATCACAAAGCTTCTATCTCTTCTACTCACAATTTTTCCAATTCCATCATTCCTCAGCTTCAAGTTCATCTCTATAACCCTTGGCAATTCCATGGGAAAGCGCTTTCAAATGGGGAGATTCACTACTTTTTCAGCAAAGTGGGAGAAAGTAGAGCAACAGAGAGTGGATATTGGAAAGATGTTTCAATGGATGAGAAAATCTTGTGTAGTGGCAATGGAAATGAAGTGGGAATAAAAAAGTATCATATTTTCTTTGTTGGTGAAGAAGATGACTCATCAACAGCCATTCAAACAAGTTGGGTCATGCATGAGTATCACATCTCTACCTACCTTTTCAACAACCATCCTCCATCTCAAAACAACTGCAATACATCACATACAAAATCAGAGTTTGGATTATGGGTTCTGTGTCGAGTTTTTGAAGCAAAAGACAATACTGGAAGAAGTATGTTTAATTACGAGGAAGATGGTGATAATGAAAGTGAACTTTCATATTTGGATGAAATGTATTTGACAATATTAGAGGATATTTGAATTTCCAATCTTAATTAAA ATGGAAGCCATCAGTGGAAATAGCTTCAACTTATTGCCTCCTGGTCTCAGATTCTGCCCAACAGATGAAGATCTTGTGCTTCACTTTCTCTATCACAAAGCTTCTATCTCTTCTACTCACAATTTTTCCAATTCCATCATTCCTCAGCTTCAAGTTCATCTCTATAACCCTTGGCAATTCCATGGGAAAGCGCTTTCAAATGGGGAGATTCACTACTTTTTCAGCAAAGTGGGAGAAAGTAGAGCAACAGAGAGTGGATATTGGAAAGATGTTTCAATGGATGAGAAAATCTTGTGTAGTGGCAATGGAAATGAAGTGGGAATAAAAAAGTATCATATTTTCTTTGTTGGTGAAGAAGATGACTCATCAACAGCCATTCAAACAAGTTGGGTCATGCATGAGTATCACATCTCTACCTACCTTTTCAACAACCATCCTCCATCTCAAAACAACTGCAATACATCACATACAAAATCAGAGTTTGGATTATGGGTTCTGTGTCGAGTTTTTGAAGCAAAAGACAATACTGGAAGAAGTATGTTTAATTACGAGGAAGATGGTGATAATGAAAGTGAACTTTCATATTTGGATGAAATGTATTTGACAATATTAGAGGATATTTGA MEAISGNSFNLLPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQVHLYNPWQFHGKALSNGEIHYFFSKVGESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTAIQTSWVMHEYHISTYLFNNHPPSQNNCNTSHTKSEFGLWVLCRVFEAKDNTGRSMFNYEEDGDNESELSYLDEMYLTILEDI Homology
BLAST of CcUC02G017550 vs. NCBI nr
Match: XP_038900898.1 (NAC domain-containing protein 104-like [Benincasa hispida]) HSP 1 Score: 361.7 bits (927), Expect = 4.3e-96 Identity = 177/208 (85.10%), Postives = 186/208 (89.42%), Query Frame = 0
BLAST of CcUC02G017550 vs. NCBI nr
Match: KAG6605330.1 (NAC domain-containing protein 104, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035288.1 NAC domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 326.6 bits (836), Expect = 1.5e-85 Identity = 156/207 (75.36%), Postives = 177/207 (85.51%), Query Frame = 0
BLAST of CcUC02G017550 vs. NCBI nr
Match: XP_023007250.1 (NAC domain-containing protein 104-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 323.9 bits (829), Expect = 9.8e-85 Identity = 155/207 (74.88%), Postives = 177/207 (85.51%), Query Frame = 0
BLAST of CcUC02G017550 vs. NCBI nr
Match: XP_023534627.1 (NAC domain-containing protein 104-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 323.2 bits (827), Expect = 1.7e-84 Identity = 153/203 (75.37%), Postives = 173/203 (85.22%), Query Frame = 0
BLAST of CcUC02G017550 vs. NCBI nr
Match: XP_022947761.1 (NAC domain-containing protein 104-like [Cucurbita moschata]) HSP 1 Score: 322.0 bits (824), Expect = 3.7e-84 Identity = 154/207 (74.40%), Postives = 176/207 (85.02%), Query Frame = 0
BLAST of CcUC02G017550 vs. ExPASy Swiss-Prot
Match: Q8GWK6 (NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 8.2e-34 Identity = 76/194 (39.18%), Postives = 113/194 (58.25%), Query Frame = 0
BLAST of CcUC02G017550 vs. ExPASy Swiss-Prot
Match: Q9LD44 (NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24 Identity = 66/202 (32.67%), Postives = 106/202 (52.48%), Query Frame = 0
BLAST of CcUC02G017550 vs. ExPASy Swiss-Prot
Match: Q9LDY8 (NAC domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=NAC055 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21 Identity = 67/209 (32.06%), Postives = 105/209 (50.24%), Query Frame = 0
BLAST of CcUC02G017550 vs. ExPASy Swiss-Prot
Match: Q9ZNU2 (NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.3e-20 Identity = 58/177 (32.77%), Postives = 96/177 (54.24%), Query Frame = 0
BLAST of CcUC02G017550 vs. ExPASy Swiss-Prot
Match: Q9C932 (NAC domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NAC019 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.0e-20 Identity = 57/179 (31.84%), Postives = 96/179 (53.63%), Query Frame = 0
BLAST of CcUC02G017550 vs. ExPASy TrEMBL
Match: A0A6J1L2G4 (NAC domain-containing protein 104-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499792 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 4.8e-85 Identity = 155/207 (74.88%), Postives = 177/207 (85.51%), Query Frame = 0
BLAST of CcUC02G017550 vs. ExPASy TrEMBL
Match: A0A6J1G7C6 (NAC domain-containing protein 104-like OS=Cucurbita moschata OX=3662 GN=LOC111451523 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.8e-84 Identity = 154/207 (74.40%), Postives = 176/207 (85.02%), Query Frame = 0
BLAST of CcUC02G017550 vs. ExPASy TrEMBL
Match: A0A0A0LME0 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G334550 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 4.2e-81 Identity = 162/217 (74.65%), Postives = 175/217 (80.65%), Query Frame = 0
BLAST of CcUC02G017550 vs. ExPASy TrEMBL
Match: A0A1S3CDX4 (NAC domain-containing protein 104-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499626 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80 Identity = 163/219 (74.43%), Postives = 177/219 (80.82%), Query Frame = 0
BLAST of CcUC02G017550 vs. ExPASy TrEMBL
Match: A0A6J1DVM4 (NAC domain-containing protein 104-like OS=Momordica charantia OX=3673 GN=LOC111023517 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 6.9e-76 Identity = 149/211 (70.62%), Postives = 169/211 (80.09%), Query Frame = 0
BLAST of CcUC02G017550 vs. TAIR 10
Match: AT5G64530.1 (xylem NAC domain 1 ) HSP 1 Score: 145.2 bits (365), Expect = 5.8e-35 Identity = 76/194 (39.18%), Postives = 113/194 (58.25%), Query Frame = 0
BLAST of CcUC02G017550 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 ) HSP 1 Score: 112.5 bits (280), Expect = 4.2e-25 Identity = 66/202 (32.67%), Postives = 106/202 (52.48%), Query Frame = 0
BLAST of CcUC02G017550 vs. TAIR 10
Match: AT3G15500.1 (NAC domain containing protein 3 ) HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22 Identity = 67/209 (32.06%), Postives = 105/209 (50.24%), Query Frame = 0
BLAST of CcUC02G017550 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-21 Identity = 58/177 (32.77%), Postives = 96/177 (54.24%), Query Frame = 0
BLAST of CcUC02G017550 vs. TAIR 10
Match: AT1G52890.1 (NAC domain containing protein 19 ) HSP 1 Score: 100.1 bits (248), Expect = 2.1e-21 Identity = 57/179 (31.84%), Postives = 96/179 (53.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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