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CcUC02G017510 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGACCTTTCTCACGCGTCTTTCCCTCTCTCTCAATCTCTAGCCTCCGCCGGTCACCGTCTCTCTCCGCCATCGTTTCATCCTCGCCGCCGAACGCTGCCGGCAATCTTCCCCTTCATCTGTTTCTCTCTCTTCTTTCCTTGTCCCTCTCTCTCTCTCTCTCTCTCTCTCTAAGATTTTCATAATTTTTTTAATAAATAAATATAGAGATTATAAGAATTTATTAGCAACAGAAAAAAAAAAAAAAAAAAAAAATTACCTTCGATTCCGTAATTCTTACCATTCTCTATCTATTCTCTTCTTCTTTCCTTTTCAGCCAAGAAATCTATTCTGTCCACAGCTCCGCCGCACCACCGTCGTACCACCACCGCGAACTGTGAGTTTTAAACATGATTTCAATTTTTTTTTTATTTTAATTCAATTTAATTAACTTTAATGTAATTTTTAGGGCTTTTAAAACTCTAGTGATGGGGAGAGGAAAGTCGAACATGAAACTGATCGGTAACGAGAAATCTGGAAAGACGAGTTTGTATAAGCGGAAAGCAAGTCTGTTACGAGCTCTCTACACTGTGTGATGTTCGTACTTGTGTCTGTTACGAGCCCTAACCAAAATGACCAATCTCCCCTCCAACTTCACACGTGGCCATCGTGTCGGGAAGACGCATCTTACAAGCCTAATTGTCTCCACAAACGTGCTCGCAAGACATTCGGTCTCCTCAACTTCTTCTCCAAACCGACATGTCGTCCAAGCTTCACAAGGATGCGGTTGAAGCCAAGTAATACAATTAAGAACACGTTTGGATTGATTATGTTTATTCAATCTCGTGGTTTATTATTATAATATTGTTAATGTTAATTAGGTTCCAAAAATGGGATGAACGTACAGGCTATCTATTAGAAGATCAATTACGGATTTTTTTTAAGTGAAATACTAAAACA AATGACCTTTCTCACGCGTCTTTCCCTCTCTCTCAATCTCTAGCCTCCGCCGGTCACCGTCTCTCTCCGCCATCGTTTCATCCTCGCCGCCGAACGCTGCCGGCAATCTTCCCCTTCATCTGTTTCTCTCTCTTCTTTCCTTGTCCCTCTCTCTCTCTCTCTCTCTCTCTCTAAGATTTTCATAATTTTTTTAATAAATAAATATAGAGATTATAAGAATTTATTAGCAACAGAAAAAAAAAAAAAAAAAAAAAATTACCTTCGATTCCGTAATTCTTACCATTCTCTATCTATTCTCTTCTTCTTTCCTTTTCAGCCAAGAAATCTATTCTGTCCACAGCTCCGCCGCACCACCGTCGTACCACCACCGCGAACTGGCTTTTAAAACTCTAGTGATGGGGAGAGGAAAGTCGAACATGAAACTGATCGGTAACGAGAAATCTGGAAAGACGAGTTTGTATAAGCGGAAAGCAAGTCTGTTACGAGCTCTCTACACTGTGTGATGTTCGTACTTGTGTCTGTTACGAGCCCTAACCAAAATGACCAATCTCCCCTCCAACTTCACACGTGGCCATCGTGTCGGGAAGACGCATCTTACAAGCCTAATTGTCTCCACAAACGTGCTCGCAAGACATTCGGTCTCCTCAACTTCTTCTCCAAACCGACATGTCGTCCAAGCTTCACAAGGATGCGGTTGAAGCCAAGTAATACAATTAAGAACACGTTTGGATTGATTATGTTTATTCAATCTCGTGGTTTATTATTATAATATTGTTAATGTTAATTAGGTTCCAAAAATGGGATGAACGTACAGGCTATCTATTAGAAGATCAATTACGGATTTTTTTTAAGTGAAATACTAAAACA ATGTTCGTACTTGTGTCTGTTACGAGCCCTAACCAAAATGACCAATCTCCCCTCCAACTTCACACGTGGCCATCGTGTCGGGAAGACGCATCTTACAAGCCTAATTGTCTCCACAAACGTGCTCGCAAGACATTCGGTCTCCTCAACTTCTTCTCCAAACCGACATGTCGTCCAAGCTTCACAAGGATGCGGTTGAAGCCAAGTAATACAATTAAGAACACGTTTGGATTGATTATGTTTATTCAATCTCGTGGTTTATTATTATAA MFVLVSVTSPNQNDQSPLQLHTWPSCREDASYKPNCLHKRARKTFGLLNFFSKPTCRPSFTRMRLKPSNTIKNTFGLIMFIQSRGLLL Homology
BLAST of CcUC02G017510 vs. NCBI nr
Match: XP_038890378.1 (floral homeotic protein FBP1-like [Benincasa hispida]) HSP 1 Score: 79.0 bits (193), Expect = 2.3e-11 Identity = 38/56 (67.86%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of CcUC02G017510 vs. NCBI nr
Match: XP_008460878.1 (PREDICTED: MADS-box protein SOC1-like [Cucumis melo] >KAA0040750.1 MADS-box protein SOC1-like [Cucumis melo var. makuwa] >TYK02066.1 MADS-box protein SOC1-like [Cucumis melo var. makuwa]) HSP 1 Score: 75.9 bits (185), Expect = 2.0e-10 Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of CcUC02G017510 vs. NCBI nr
Match: XP_022973845.1 (agamous-like MADS-box protein AGL103 [Cucurbita maxima]) HSP 1 Score: 75.1 bits (183), Expect = 3.4e-10 Identity = 36/56 (64.29%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of CcUC02G017510 vs. NCBI nr
Match: XP_023512369.1 (agamous-like MADS-box protein AGL103 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 74.3 bits (181), Expect = 5.8e-10 Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of CcUC02G017510 vs. NCBI nr
Match: KAG6571340.1 (MADS-box transcription factor PHERES 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 74.3 bits (181), Expect = 5.8e-10 Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of CcUC02G017510 vs. ExPASy TrEMBL
Match: A0A5D3BUZ8 (MADS-box protein SOC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00490 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.6e-11 Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of CcUC02G017510 vs. ExPASy TrEMBL
Match: A0A1S3CDG6 (MADS-box protein SOC1-like OS=Cucumis melo OX=3656 GN=LOC103499621 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.6e-11 Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of CcUC02G017510 vs. ExPASy TrEMBL
Match: A0A6J1ICD8 (agamous-like MADS-box protein AGL103 OS=Cucurbita maxima OX=3661 GN=LOC111472387 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10 Identity = 36/56 (64.29%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of CcUC02G017510 vs. ExPASy TrEMBL
Match: A0A6J1EVI5 (agamous-like MADS-box protein AGL103 OS=Cucurbita moschata OX=3662 GN=LOC111438359 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.8e-10 Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of CcUC02G017510 vs. ExPASy TrEMBL
Match: A0A6J1D9H6 (agamous-like MADS-box protein AGL17 OS=Momordica charantia OX=3673 GN=LOC111018474 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09 Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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