CcUC02G017380 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC02G017380
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionEukaryotic translation initiation factor 6
LocationCicolChr02: 294068 .. 299038 (+)
RNA-Seq ExpressionCcUC02G017380
SyntenyCcUC02G017380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAAATGAGCTTATATAGCTTGGAATGAAATAGGGCCTTCCTCTTGTTTTGGCCACTTTAAATCTTCAGGTTTACATTGTGCTTTGCTTCAGTTAATTATGCTCTGAATAATATCATGCTTTGAAGAGATCTTAGTGTAGCCATCGATAAGCTTTTAAATTCATCAAAAGAAAGAAATCATTAGGGAAACACTTAAATTATATTTATTTTTTTTAGCTTCCACATATGAGAGTGAGGATTCAAATTTATTATTTTTTGGTTCGAGGATATAATTTTTCATTCACCTGTAATTTGTATGTTTTGGCTCATGTAATGCAAATACTTTTCATATTTTGAGCTACAAATTAGGGGGAAAAAACAATATCTTGTAAACGAATTCTGTGATAATATTTTGATTTGACTTTTTGTTCATTATTTTTTATCTACATGGTTTAAATTTTGGTTGGCATGTGTCTATGAATAAAACTAATACAAGGATTATTATATTATAAAAATTTGATGAAATATAACAAATATCAATAATTTGGACTTAATATTAAGAGTCCTTCGTTCACTTTGGGCGAGTGTGGTTCCACGTCTAGATTGAGATCTGCAGGTAAATTTAACCTATTTGCTATTTTAAATAGTTTGATATTTTTAAAGTTTTGTTATAATATTTTTGAGTAATTTGGCTAAAATTATAGGTGGTGAACTTAACAAGAATATGTTGAATTTCTAGAAGTAAAACTATAAATAAAATTGTTGTTTAATTGGATCTTAAAGGGTATATAATGAAAAAAATATATTTTTTGAAAGGAGAACAATAATATAAAGTAAAGTTAAATTTAAGATTGTTTTGACTGAGATTTAACCAGATTATACTAATTAACTTAAGAAATCTATCAACCTGGAGGGAATTTTAGAATTTTTTATTATTAATTAAATATTTAAGAAATTGGTCCAAAAGACCACGTATATCAATTTGCATTAATAATAGAGAAAAATACTATGGTTTTTTTTGTCAGGTTTGGTCTCTACAATTTTAAACATCAGTTTTAAGTTCTGAGTTGTGATTGTAATTTAGTTCCCAATTTTGACCTTCAATCCTCAAGCTTTAAATATAGTTTTAATTTGATCTCCATGTCTTAAGACACGTCGTTTTAATCTCAATTTTTTTTGCCAACTACTCTCAATTTTGGGATTAACATCTATTAATTAATAATGATGAAGTGAAAATTTTAAATTAATTTTAATAATGATAGAAAAAATGGTGAGGCTTAGTTAATTATAATGCTTTTAAGTTAATGAATAGATATTAACAATAAATAATGGAACCAATCAATATTCAAACCTCAAGGATAAAATTGTAACATATCTAAATATATATTATATTCAAATCAAATTCAAAACTTAAGGACTAAAAATATAATATTTAGAAACTCAGGGACTAGAGGAAAATTAATTTTCCTGTATAATAAAAATGATATTGTCAAAAGATTTTTTTTTTAAAGAAAAAAATGATATAAACAAGGTTTGTGGAAAAAAAAAAAAAAAAAAGCATTACGTGATCGCAAAGAAATAGAAAACGCTGTCGTTTGTGAAGTCCCAATTTCAAGTGGCCAACTTGGGCTGTTTCTGGCGTGGCAACCACTCAATTTCGCATTGATATTAATCATATTATTAAGGGTTCCAAAGAACAAGTGATTCAAACATACTGGCCGCATCTAACTTCCTTTCACTTTGTAGCGGTTGCATTGCAAAGGGAACTTTGAATTTATCTTCGAGGGAGCTTCTTCTTGATTTTTCAAAGGTTTATCCTCTGCTTAGTTATGGCCACTAGTAAGTTTCCTTCCATTTTCATTTTATATTTCTTCTGCTTTCTTTCTCGCCTACTTTTATTATATGCATTTTTAGCCATATTCTTTGCTTTTCTTCTTTAGGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCCTGGTTGCAATTGGTGGCTCTGAGAATTTATACAGGTTTTTTTTTTTTTTTTTTTTTTCCTCCATTCCTGTTTCCTAACTGTGTTTCTGTGGAATCAATTTCTTACGATTTTTTTTTTTTTCTTGTTCATGTTTAGTACGTTCGAAACTGAATTAGGTGGTGTCATTCCGGTCGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTATGTGCTGGTTTGTTAAACTCACCTGCATTTTTAATACTATTTTGGTCCCTCAAGAGTTTGTTCATTTTAAGTCGTCCCTGTAATTTCAATAAATCTTAAATTTAGTTTCTCAATTTTAATTTTCTGTCGAACTTGGTACAATAATTATAAAATTTTCATGTAGAAAATATAATATGTGAATATTTTTGCTATAAAATCGAAAAGTGAAAAAAAGCGAGAAAGCGACACAAGTTTACTAACAGTCTGTTAGCTAAGTCCATGGGCAGAGAGATGAGCAATTTTTTTAGCAAGGGAGAATATGAACTTAATAAGGTGCAAGTAGGGTTAGATGGTTTATATATGACACATTTTTGAACTCTAGGCCCGGAATTGTAAATAACACATAATACGAAGGGCCAAATGACATATTTAAGGCATTTCAATAATGTTTCCTAAATTTATAGTAAAAAAGCTAATAGACATTTTTTTAAAAAAAAAAAAAACACAACAATAAACTAGTAGAAGGGATTAAATTTAAGATTCATTGAAACTTGAAAGTACGGGGATTTAAATTGAACATTTAAAAGAGTAGGGACTAAATTTAAACAAATTTCAAAGTACCAGGACTAAAATGATATTTTAATCATTTTTTCATCGTTTTATGCATCTTTTAAAGAAGGGTACCCATTGATGATGCGAGGCCCAAACTACTCATATTCATGTTTTCATAACATTGTTTTTATTTCTTACTGTAGGAAACAAAAATGGGCTTCTAGTACCACACACCACTACTGATCAAGGCAAGTTTCTTTTCTATCTTGTCATATTACACCTTTAATTTAATAGTTGGGGTGTATACCTGCCACATCTAATTGAATATCTTTGAGTATTGAATAGAACAATATGCCCTCCTGTTAAAATTTTGACTAGATGGTTATTTGCTCTATTTTTTTTGTACCAATGATGTCAGATTCTAGCCATTTACACAATAAAATTGTAAATGGTTACCACCTTGATCAATAAGAGTCTCGGATCATTGTTACGTATGATTCCATTGTGAGTTTGAATTATCAAATTTTGTATGTCTATTTGTGGTGTTGGTGAAGCCTAAACATTTCTTAGGTAATCCTAGTTGTTACTGCTAAATTGATAGGCACTGTCATCTTTCAACATTTCTAGATTAACACGTTGGCTGTTGTGTTTTTCTTAGCTAATCCTGGTTGTTACTACTCCCTTTTATTTAATCTCATGATCAATTGGTGAAGTTTTTTTTTGTAATCCATTTGATAGGATACTCCCCTTTTGTAATTTCTATCTCATCATTGAAATGTTACTATTTTCTATAAAAGAAAATCATAGAAGTATTAATATTTTTGTGGGTTAGACTGGCAGTTAGGCTGTTCCTTAACTGCGTCATTATGCAATAAGGAATTTCTGTCTTGCACATGGTGCCTGAAACTGTAAGCATTGCCACTATTGAACGTGTGTATATACAAACTCCTTTAGTGAGGATGCATCATGAAATTGAAGTTTGTTCTAATTTGCTCGAAACTCTTCTGGATGTTCTTTAATTTGTGCTATTTAGCGATGATGTGTATGACCAAATTATTTAATTGACATTGTGTTCCTATTCTTTGCGTTTTGAAGAACTTCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGATCGGGTATTTTTTCCTTTTACTTACCCTTCCTACTTCACATTATGCCTCTAGTGTCACTTTCTGCGTCACCATCATATTGTTTAGCTTGCAATCTCTTGAACAGTGTTTTCTCATTTCAATCTGGACATTTCATATCTCTTTAATATCCTAGTTCCTAGAAAATGTTCATGAAAGAGCTTGTCCCGCCCTCAGAGGCAATAATTTCTTTTAAGCAGTGTGGGTAATTTATGAACTGAGTTGAGCATATATCCAAATAAAGACAGGACATGGTACAGAATGTGGACTCTTTGATTGGAGTGTCTTCTTAAAAAATGTATTCTTTTGCAAATTGTACATATGGAACTTGAGACTGCTTTAGTTCTGTCATCCATTCTACTTTTTCTACTAAAAGAATCAAGTTCTTCTCTCGATGATCAGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTGGAGGTCTTTAGGCAGACAGTGGCGGGCAACGTCCTTGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTAATATTCACCTTCCCTGCTCTTTAACCAAGTGTAGTCTCTCCAAATTGAACTTCATTCTTTCAACTTCATGTAAAATAATTCCTGAAAGTTGGAATTATGCAAATATTTTGCAGGTTCATCCACATACATCTGTTGAAGATCTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTGGAACTGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCGTTTTGTGGTTCGGACACCACGGCCACCGAGTTATCGGTGATCGAGAGTGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGATAGTTACGTATGAGGAGTCACTTCTACTATACTATACTTAAGATCTTGCAAGCAATTGATTGTTATTACTCTTGTGTCATTTTCCTTCTATTACATTTACAACATTGTGTATTTTAAAAAAAAAAAA

mRNA sequence

ATGGCTTCCACATATGAGAGTGAGGATTCAAATTTATTATTTTTTGGTTTGTGGAAAAAAAAAAAAAAAAAAGCATTACGTGATCGCAAAGAAATAGAAAACGCTGTCGTTTGTGAAGTCCCAATTTCAAGTGGCCAACTTGGGCTGTTTCTGGCGTGGCAACCACTCAATTTCGCATTGATATTAATCATATTATTAAGGGTTCCAAAGAACAACGGTTGCATTGCAAAGGGAACTTTGAATTTATCTTCGAGGGAGCTTCTTCTTGATTTTTCAAAGGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCCTGGTTGCAATTGGTGGCTCTGAGAATTTATACAGGAAACAAAAATGGGCTTCTAGTACCACACACCACTACTGATCAAGGCAAGTTTCTTTTCTATCTTCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTGGAGGTCTTTAGGCAGACAGTGGCGGGCAACGTCCTTGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACATCTGTTGAAGATCTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTGGAACTGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCGTTTTGTGGTTCGGACACCACGGCCACCGAGTTATCGGTGATCGAGAGTGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGATAGTTACGTATGAGGAGTCACTTCTACTATACTATACTTAAGATCTTGCAAGCAATTGATTGTTATTACTCTTGTGTCATTTTCCTTCTATTACATTTACAACATTGTGTATTTTAAAAAAAAAAAA

Coding sequence (CDS)

ATGGCTTCCACATATGAGAGTGAGGATTCAAATTTATTATTTTTTGGTTTGTGGAAAAAAAAAAAAAAAAAAGCATTACGTGATCGCAAAGAAATAGAAAACGCTGTCGTTTGTGAAGTCCCAATTTCAAGTGGCCAACTTGGGCTGTTTCTGGCGTGGCAACCACTCAATTTCGCATTGATATTAATCATATTATTAAGGGTTCCAAAGAACAACGGTTGCATTGCAAAGGGAACTTTGAATTTATCTTCGAGGGAGCTTCTTCTTGATTTTTCAAAGGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCCTGGTTGCAATTGGTGGCTCTGAGAATTTATACAGGAAACAAAAATGGGCTTCTAGTACCACACACCACTACTGATCAAGGCAAGTTTCTTTTCTATCTTCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTGGAGGTCTTTAGGCAGACAGTGGCGGGCAACGTCCTTGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACATCTGTTGAAGATCTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTGGAACTGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCGTTTTGTGGTTCGGACACCACGGCCACCGAGTTATCGGTGATCGAGAGTGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGATAGTTACGTATGA

Protein sequence

MASTYESEDSNLLFFGLWKKKKKKALRDRKEIENAVVCEVPISSGQLGLFLAWQPLNFALILIILLRVPKNNGCIAKGTLNLSSRELLLDFSKGLCLRTHVKLGFSPSSLMLTAWLQLVALRIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
Homology
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BLAST of CcUC02G017380 vs. NCBI nr
Match: KAG4939804.1 (hypothetical protein JHK86_045945 [Glycine max])

HSP 1 Score: 352.4 bits (903), Expect = 3.9e-93
Identity = 188/249 (75.50%), Postives = 208/249 (83.53%), Query Frame = 0 

Query: 62  LIILLRVPKNNGCIAKGTLNLSSRELLLDFSKGLCLRTHVKLGFSPSSLMLTAWLQLVAL 121
           L  LL+VP  +G ++ G   +S+     DFS    L+  VKL  S +  M T WL LV L
Sbjct: 252 LSTLLQVPLCSGNLSSGAAAISAAH--QDFS----LKIIVKLESSLNLPMPTVWLPLVVL 311

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           +  TGNKNGLL+PHTTTDQ       HLRNSLPDQVVVQRI ERLSALGN IACNDHVAL
Sbjct: 312 KASTGNKNGLLLPHTTTDQE----LQHLRNSLPDQVVVQRIDERLSALGNCIACNDHVAL 371

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
           THTDLDRETEE+IADVLGVEVFRQT+AGN+LVGSYC+F+NRGGLVHPHTS+EDLDELSTL
Sbjct: 372 THTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTL 431

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAG+T NDWTAFCGSDTTATELSVIESVFKLREAQPS+IV+EM
Sbjct: 432 LQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEM 490

Query: 302 RKSLIDSYV 311
           RKSLID+YV
Sbjct: 492 RKSLIDTYV 490

[Close]
BLAST of CcUC02G017380 vs. NCBI nr
Match: XP_038900322.1 (eukaryotic translation initiation factor 6-2 [Benincasa hispida])

HSP 1 Score: 345.9 bits (886), Expect = 3.6e-91
Identity = 179/189 (94.71%), Postives = 180/189 (95.24%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL
Sbjct: 61  RLCAGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
           THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL
Sbjct: 121 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM
Sbjct: 181 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 240

Query: 302 RKSLIDSYV 311
           RKSLIDSYV
Sbjct: 241 RKSLIDSYV 245

[Close]
BLAST of CcUC02G017380 vs. NCBI nr
Match: XP_022148877.1 (eukaryotic translation initiation factor 6-2-like, partial [Momordica charantia])

HSP 1 Score: 344.4 bits (882), Expect = 1.1e-90
Identity = 177/189 (93.65%), Postives = 180/189 (95.24%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL
Sbjct: 48  RLCAGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 107

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
           THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTL
Sbjct: 108 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTL 167

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EM
Sbjct: 168 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEM 227

Query: 302 RKSLIDSYV 311
           RKSLIDSYV
Sbjct: 228 RKSLIDSYV 232

[Close]
BLAST of CcUC02G017380 vs. NCBI nr
Match: XP_038880643.1 (eukaryotic translation initiation factor 6-2-like [Benincasa hispida])

HSP 1 Score: 343.6 bits (880), Expect = 1.8e-90
Identity = 178/189 (94.18%), Postives = 179/189 (94.71%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL
Sbjct: 61  RLCAGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
           THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL
Sbjct: 121 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAGLTANDW AFCGSDTTATELSVIESVFKLREAQPSSIVEEM
Sbjct: 181 LQVPLVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 240

Query: 302 RKSLIDSYV 311
           RKSLIDSYV
Sbjct: 241 RKSLIDSYV 245

[Close]
BLAST of CcUC02G017380 vs. NCBI nr
Match: KJB60505.1 (hypothetical protein B456_009G309100 [Gossypium raimondii])

HSP 1 Score: 343.2 bits (879), Expect = 2.3e-90
Identity = 171/200 (85.50%), Postives = 186/200 (93.00%), Query Frame = 0 

Query: 111 MLTAWLQLVALRIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALG 170
           ML AWLQL  L+  TGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRI+E+LSALG
Sbjct: 1   MLIAWLQLEGLKTSTGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIEEKLSALG 60

Query: 171 NTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHT 230
           N IACNDHVALTHTDLDRETEE+IADVLGVEVFRQT+AGN+LVGSYC+F+NRGGLVHPHT
Sbjct: 61  NCIACNDHVALTHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHT 120

Query: 231 SVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLR 290
           S+EDLDELSTLLQVPLVAGT+NRGSEVIAAG+T NDWTAFCGSDTTATELSVIESVFKLR
Sbjct: 121 SIEDLDELSTLLQVPLVAGTINRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLR 180

Query: 291 EAQPSSIVEEMRKSLIDSYV 311
           EAQP++IV+EMRKSLID+YV
Sbjct: 181 EAQPTAIVDEMRKSLIDTYV 196

[Close]
BLAST of CcUC02G017380 vs. ExPASy Swiss-Prot
Match: Q9M060 (Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana OX=3702 GN=EIF6-2 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 6.2e-86
Identity = 158/189 (83.60%), Postives = 175/189 (92.59%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRI ERLSALGN IACND+VAL
Sbjct: 61  RLCAGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
            HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTSVEDL+ELSTL
Sbjct: 121 AHTDLDKETEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPHTSVEDLEELSTL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAG+T NDWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EM
Sbjct: 181 LQVPLVAGTVNRGSEVIAAGMTVNDWTSFCGSDTTATELSVIDSIFKLREAQPSSIVDEM 240

Query: 302 RKSLIDSYV 311
           RKSLID+YV
Sbjct: 241 RKSLIDTYV 245

[Close]
BLAST of CcUC02G017380 vs. ExPASy Swiss-Prot
Match: P56537 (Eukaryotic translation initiation factor 6 OS=Homo sapiens OX=9606 GN=EIF6 PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.6e-71
Identity = 135/187 (72.19%), Postives = 155/187 (82.89%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GN++GLLVP+ TTDQ       H+RNSLPD V ++R++ERLSALGN   CND+VAL
Sbjct: 61  RMCVGNRHGLLVPNNTTDQE----LQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
            H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+L
Sbjct: 121 VHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EAQPS+I   M
Sbjct: 181 LQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSM 240

Query: 302 RKSLIDS 309
           R SLIDS
Sbjct: 241 RDSLIDS 243

[Close]
BLAST of CcUC02G017380 vs. ExPASy Swiss-Prot
Match: O55135 (Eukaryotic translation initiation factor 6 OS=Mus musculus OX=10090 GN=Eif6 PE=1 SV=2)

HSP 1 Score: 267.3 bits (682), Expect = 2.1e-70
Identity = 134/187 (71.66%), Postives = 155/187 (82.89%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GN++GLLVP+ TTDQ       H+RNSLPD V ++R++ERLSALGN   CND+VAL
Sbjct: 61  RMCVGNRHGLLVPNNTTDQE----LQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
            H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+L
Sbjct: 121 VHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EA+PS+I   M
Sbjct: 181 LQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSM 240

Query: 302 RKSLIDS 309
           R SLIDS
Sbjct: 241 RDSLIDS 243

[Close]
BLAST of CcUC02G017380 vs. ExPASy Swiss-Prot
Match: Q3KRD8 (Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.1e-70
Identity = 134/187 (71.66%), Postives = 155/187 (82.89%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GN++GLLVP+ TTDQ       H+RNSLPD V ++R++ERLSALGN   CND+VAL
Sbjct: 61  RMCVGNRHGLLVPNNTTDQE----LQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
            H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+L
Sbjct: 121 VHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EA+PS+I   M
Sbjct: 181 LQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSM 240

Query: 302 RKSLIDS 309
           R SLIDS
Sbjct: 241 RDSLIDS 243

[Close]
BLAST of CcUC02G017380 vs. ExPASy Swiss-Prot
Match: Q6GR45 (Eukaryotic translation initiation factor 6 OS=Xenopus laevis OX=8355 GN=eif6 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.1e-70
Identity = 133/187 (71.12%), Postives = 156/187 (83.42%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GN++GL+VP+ TTDQ       H+RNSLPD V +QR++ERLSALGN IACND+VAL
Sbjct: 61  RMCVGNRHGLMVPNNTTDQE----LQHMRNSLPDSVRIQRVEERLSALGNVIACNDYVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
            H DLDRETEE++ADVL VEVFRQT+A  VLVGSYC+F+N+GGL+HP TS+ED DELS+L
Sbjct: 121 VHPDLDRETEEILADVLKVEVFRQTIAEQVLVGSYCAFSNQGGLLHPKTSIEDQDELSSL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLV GTVNRGSEVIAAG+  NDW AFCG DTT+TELSVIESVFKL +A PS+I   M
Sbjct: 181 LQVPLVTGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVIESVFKLSDAHPSTIATSM 240

Query: 302 RKSLIDS 309
           R SLIDS
Sbjct: 241 RDSLIDS 243

[Close]
BLAST of CcUC02G017380 vs. ExPASy TrEMBL
Match: A0A6J1D683 (Eukaryotic translation initiation factor 6 OS=Momordica charantia OX=3673 GN=LOC111017442 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 5.1e-91
Identity = 177/189 (93.65%), Postives = 180/189 (95.24%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL
Sbjct: 48  RLCAGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 107

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
           THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTL
Sbjct: 108 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTL 167

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EM
Sbjct: 168 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEM 227

Query: 302 RKSLIDSYV 311
           RKSLIDSYV
Sbjct: 228 RKSLIDSYV 232

[Close]
BLAST of CcUC02G017380 vs. ExPASy TrEMBL
Match: A0A0D2UWN6 (Eukaryotic translation initiation factor 6 OS=Gossypium raimondii OX=29730 GN=EIF6 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.1e-90
Identity = 171/200 (85.50%), Postives = 186/200 (93.00%), Query Frame = 0 

Query: 111 MLTAWLQLVALRIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALG 170
           ML AWLQL  L+  TGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRI+E+LSALG
Sbjct: 1   MLIAWLQLEGLKTSTGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIEEKLSALG 60

Query: 171 NTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHT 230
           N IACNDHVALTHTDLDRETEE+IADVLGVEVFRQT+AGN+LVGSYC+F+NRGGLVHPHT
Sbjct: 61  NCIACNDHVALTHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHT 120

Query: 231 SVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLR 290
           S+EDLDELSTLLQVPLVAGT+NRGSEVIAAG+T NDWTAFCGSDTTATELSVIESVFKLR
Sbjct: 121 SIEDLDELSTLLQVPLVAGTINRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLR 180

Query: 291 EAQPSSIVEEMRKSLIDSYV 311
           EAQP++IV+EMRKSLID+YV
Sbjct: 181 EAQPTAIVDEMRKSLIDTYV 196

[Close]
BLAST of CcUC02G017380 vs. ExPASy TrEMBL
Match: A0A6J1I8L9 (Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111472384 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 5.6e-90
Identity = 175/189 (92.59%), Postives = 179/189 (94.71%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQERLSALGNTI+CNDHVAL
Sbjct: 61  RLCAGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
           THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTL
Sbjct: 121 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAGL ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EM
Sbjct: 181 LQVPLVAGTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEM 240

Query: 302 RKSLIDSYV 311
           RKSLIDSYV
Sbjct: 241 RKSLIDSYV 245

[Close]
BLAST of CcUC02G017380 vs. ExPASy TrEMBL
Match: A0A6J1L2F0 (Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111499780 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 9.6e-90
Identity = 174/189 (92.06%), Postives = 178/189 (94.18%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL
Sbjct: 61  RLCAGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
           THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTL
Sbjct: 121 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAGL  NDWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EM
Sbjct: 181 LQVPLVAGTVNRGSEVIAAGLIVNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEM 240

Query: 302 RKSLIDSYV 311
           RKSLIDSYV
Sbjct: 241 RKSLIDSYV 245

[Close]
BLAST of CcUC02G017380 vs. ExPASy TrEMBL
Match: A0A6J1D392 (Eukaryotic translation initiation factor 6 OS=Momordica charantia OX=3673 GN=LOC111016616 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 9.6e-90
Identity = 175/189 (92.59%), Postives = 178/189 (94.18%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL
Sbjct: 61  RLCAGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
            HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTL
Sbjct: 121 AHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAGLTANDW AFCGSDTTATELSVIESVFKLREAQPSSIV+EM
Sbjct: 181 LQVPLVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEM 240

Query: 302 RKSLIDSYV 311
           RKSLIDSYV
Sbjct: 241 RKSLIDSYV 245

[Close]
BLAST of CcUC02G017380 vs. TAIR 10
Match: AT3G55620.1 (Translation initiation factor IF6 )

HSP 1 Score: 318.9 bits (816), Expect = 4.4e-87
Identity = 158/189 (83.60%), Postives = 175/189 (92.59%), Query Frame = 0 

Query: 122 RIYTGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL 181
           R+  GNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRI ERLSALGN IACND+VAL
Sbjct: 61  RLCAGNKNGLLVPHTTTDQE----LQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVAL 120

Query: 182 THTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTL 241
            HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTSVEDL+ELSTL
Sbjct: 121 AHTDLDKETEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPHTSVEDLEELSTL 180

Query: 242 LQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEM 301
           LQVPLVAGTVNRGSEVIAAG+T NDWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EM
Sbjct: 181 LQVPLVAGTVNRGSEVIAAGMTVNDWTSFCGSDTTATELSVIDSIFKLREAQPSSIVDEM 240

Query: 302 RKSLIDSYV 311
           RKSLID+YV
Sbjct: 241 RKSLIDTYV 245

[Close]
BLAST of CcUC02G017380 vs. TAIR 10
Match: AT2G39820.1 (Translation initiation factor IF6 )

HSP 1 Score: 256.1 bits (653), Expect = 3.5e-68
Identity = 125/185 (67.57%), Postives = 155/185 (83.78%), Query Frame = 0 

Query: 126 GNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTD 185
           GNKNGLL+ HT TDQ       HLR+SLPD+VVVQRI+E + ALGN IACND+VAL H  
Sbjct: 67  GNKNGLLLSHTITDQE----LQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVHPK 126

Query: 186 LDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVP 245
           L+++TEE+I+DVLGVEV+RQT+A N LVGSYCS +N GG+VH +T+VE++ EL+ L+QVP
Sbjct: 127 LEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQVP 186

Query: 246 LVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSL 305
           LVAGTVNRGS+VI+AGLT NDWTAFCGSDTTA ELSV+ ++FKL ++QP  +  EMRKSL
Sbjct: 187 LVAGTVNRGSQVISAGLTVNDWTAFCGSDTTAVELSVVNNIFKLVQSQPDFVGSEMRKSL 246

Query: 306 IDSYV 311
           ID+YV
Sbjct: 247 IDTYV 247

The following BLAST results are available for this feature:
BLAST of CcUC02G017380 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG4939804.13.9e-9375.50hypothetical protein JHK86_045945 [Glycine max][more]
XP_038900322.13.6e-9194.71eukaryotic translation initiation factor 6-2 [Benincasa hispida][more]
XP_022148877.11.1e-9093.65eukaryotic translation initiation factor 6-2-like, partial [Momordica charantia][more]
XP_038880643.11.8e-9094.18eukaryotic translation initiation factor 6-2-like [Benincasa hispida][more]
KJB60505.12.3e-9085.50hypothetical protein B456_009G309100 [Gossypium raimondii][more]
BLAST of CcUC02G017380 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M0606.2e-8683.60Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana OX=3702 GN=... [more]
P565379.6e-7172.19Eukaryotic translation initiation factor 6 OS=Homo sapiens OX=9606 GN=EIF6 PE=1 ... [more]
O551352.1e-7071.66Eukaryotic translation initiation factor 6 OS=Mus musculus OX=10090 GN=Eif6 PE=1... [more]
Q3KRD82.1e-7071.66Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6... [more]
Q6GR452.1e-7071.12Eukaryotic translation initiation factor 6 OS=Xenopus laevis OX=8355 GN=eif6 PE=... [more]
BLAST of CcUC02G017380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D6835.1e-9193.65Eukaryotic translation initiation factor 6 OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A0D2UWN61.1e-9085.50Eukaryotic translation initiation factor 6 OS=Gossypium raimondii OX=29730 GN=EI... [more]
A0A6J1I8L95.6e-9092.59Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1L2F09.6e-9092.06Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1D3929.6e-9092.59Eukaryotic translation initiation factor 6 OS=Momordica charantia OX=3673 GN=LOC... [more]
BLAST of CcUC02G017380 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G55620.14.4e-8783.60Translation initiation factor IF6 [more]
AT2G39820.13.5e-6867.57Translation initiation factor IF6 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002769Translation initiation factor IF6SMARTSM00654eIF6neu2coord: 78..269
e-value: 3.0E-71
score: 252.7
IPR002769Translation initiation factor IF6TIGRFAMTIGR00323TIGR00323coord: 123..289
e-value: 9.9E-56
score: 186.4
IPR002769Translation initiation factor IF6PFAMPF01912eIF-6coord: 123..268
e-value: 1.9E-53
score: 180.8
IPR002769Translation initiation factor IF6PANTHERPTHR10784EUKARYOTIC TRANSLATION INITIATION FACTOR 6coord: 121..310
IPR002769Translation initiation factor IF6HAMAPMF_00032eIF_6coord: 122..310
score: 93.046867
IPR002769Translation initiation factor IF6CDDcd00527IF6coord: 125..288
e-value: 2.04338E-89
score: 264.147
NoneNo IPR availableGENE3D3.75.10.10coord: 117..290
e-value: 1.1E-80
score: 272.2
NoneNo IPR availablePANTHERPTHR10784:SF8EUKARYOTIC TRANSLATION INITIATION FACTOR 6coord: 121..310
NoneNo IPR availableSUPERFAMILY55909Penteincoord: 123..289

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC02G017380.1CcUC02G017380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902626 assembly of large subunit precursor of preribosome
biological_process GO:0000460 maturation of 5.8S rRNA
biological_process GO:0000470 maturation of LSU-rRNA
biological_process GO:0042256 mature ribosome assembly
biological_process GO:0000054 ribosomal subunit export from nucleus
biological_process GO:0006413 translational initiation
cellular_component GO:0005829 cytosol
cellular_component GO:0005730 nucleolus
cellular_component GO:0030687 preribosome, large subunit precursor
molecular_function GO:0043023 ribosomal large subunit binding
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003743 translation initiation factor activity