![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC02G017330 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCATTCCATTTTGTTGTTTTTGGCAACATCTTGAGCTTCGCTAATTAATAGATTTGGAAAGCTGTGGGAAAATGGGTTCCCCTTGTTCCCATGATCAGTGGCTAGAGTTGAGTTTAGGATTGAAAGGCACAAAGAAGAAATTACAAGAAAAAGAAGAAGAGGAAACAAAGTTGCACTGCCAAAACACTTCTCATGAGCATTTGGATGAGGAAATTAATGAGGATTGTTTGGAGTTGAGGCTTCAAATAGGGCCTAACAAAAATTACAATATGGGATTAATGGATTTAATGTATCATCAAAACAAGAAGAAGCAAAAAGGGGCATTTCATAGTGATTGTTATTATAATTATTATTCTTCACTCACCAACTTTCGCCTTTCTTCTTCATCACCATCTCCCAACTCTGCTGGTTTCTGGTTCTCACTACTCTCTTCACCCAACAGGTCACCTTCCTAAACCCTCTCTCTCTCTCTTTAATTTATTCATCATCATCTCTTCAAAAGAAAAGCTTTGATTTTCTTTCCTAAAATAAAATAGAATTTCTTTTTCTTTTCTTCTGCTAAAGAATTTATTTTGTGAAGCTTTTTTTTTACCACACATGGAAGAAGGAGCGAATCGCTAACTTTAAAGTTAGCGGTACAAATTTAAAATTTTATGACATTGTTCTTCTTAATAATTTGCATTTAATTGTGGATTTTTTTCTTTTTTTCCTGACCATATATGGGAAAAAGAAGAGAACTTCTCACTTCAAAATCCATACAAACAAACTTTGTATCATATTGGTCACTTTTGGTGTAATAATATGAAGTTAATTATGAGAATGTTGGATTATTAATTATAATTAATAATAATTTGCATTTTGAAATGTGATAGGAAGGGAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGTAAGTGACAGCATTCAAAAACGCCATCAAATCACACAAACCCTTTCAAATTGCCAAGTTTATTGTATACTATTTTTTGTTTTGTTTATTTTACAAAATCTTTCTTTTAATTTCTTAAATAAATGTTATAAAACTTTGACCATCACATATTGAATATGCATTTTTTTAAATACAGTTAGAGGTAGAGGGTGAATATGCAATCTTACCTATATAAGTTTTAATTTGTTAAGATAAATGTTGTAGGAAAGGATGGATATTAAGTGAACAAAGTGAGAAATTAATTTATACTCTAAATTTTAAGTGTTGTGTGAGTTAAAACTCGAAATCGATATTTGTATCAATTTAAATTCTAAATTTCACGATTACTTGTTTAACAATTATTTTATAACTATCTTTCTTTGATTTTCTTTTAACAATTGTATCAATAAAACTCAAAACTAATGTTTGAGGTATATAATTCACAATTTTCAAACAAAACTCTAATGGAATTGAAGTTTTAAATTGAGTCACTAATTGAGATGAGGTATATAATTTTTTGTTTTTGAACTGTGAAAAAGTTGAAAGATGTAAGTTTGAGCTAAGGAAAAGTGGAGTTGAAGCATTAGAATAATAATAATAATAATAATTTTGTGTATTTGGGTCTGAAATCAAATGATGAGAAATGGACTGGGAAAAGGAAAAGCTGAGTGTTTGGGTTATGGATTTTGGTGAAAAACTGTTTAGGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGTTGGGTCTCTCCAATCAAGCTCAGGTAACAAACCAAAACTATCTCATTTCTTTTAAATAATTTAATTTATTAATTATAATATATTACAATAACACAAGTATATTATATTTGGGTGCCATCAATCTTACGTAACCAAACCTTTTTACTGTTTTTTTTTTTTTAAATAATGAAATCAAATATTATTCATACAATAATATATTCCTTTTTTATTCAATTTTGGCATGTTATTAAATTTTCTTTTAACTTTATAATATTGATCTTAATTTTTATTTAAATTTCTTTTTTTATTAATGTGAATTTGCATAAAAATCGAAAATGCAACTCATATTTAAAGAAATGAAGTTGAGAACCTTACAAAAAAAATCATCTACTTGGTCCAAAGGGCACATGCATGGGTTAAAAATGATTAATTAATTTTGTGTCTTAGTTTTTAATATTTATTCTCTCTCTAATAATTACAAAGTCAGAGGGGTTTTTGAAAAAAAGTGAGGGATGAAGCATGCATGAGATGTCTTAGTCAAATGTCTTAGTGAGTGTTGGGATATGATGCATGCAAAATGTTGCAAGTGAATTAATGAAGAAGAGAGAGAGAGAGAGAGGGGTTTAATGATCAATAATAATGAATTGAGGGGTTGTTTTATTATTTTCTTAAGTTTTGAAGTTTTTATTTGGTTTTTTTATGTGGAGGTTGAATTATGGTGCATGGGAGAGAGGCTGTTGCAGACTCAGTCACTAAAGCAAGTGAGAGATGGAATTTGGGTGCCTAAGTTGGTGGAATTCCTAAATTCAAATTCATCATTATCAACTTCTTCAATATTTCACCATTGCTCTCATCTTATGTCTTTGCATTATGGAACAACATCCTTCTTCTAACTCTCTCTCTATATATATATATATATATATATTTATTGTGGACTCAAATTAGATGTAAGTATAGTACTAAATTTCAAATGACGAGGGTCGATATTTCTTTTGCTATTTACTTATATTTATGTGTCCGAAATCAACCATATAAAAGGTAAATTAAGAATATATAGTATGAAAAGTATGTTGAGGGAATATTAGTCTAATTTATTTAAAGAAGTGAAATGATTGTTTATTA CCCATTCCATTTTGTTGTTTTTGGCAACATCTTGAGCTTCGCTAATTAATAGATTTGGAAAGCTGTGGGAAAATGGGTTCCCCTTGTTCCCATGATCAGTGGCTAGAGTTGAGTTTAGGATTGAAAGGCACAAAGAAGAAATTACAAGAAAAAGAAGAAGAGGAAACAAAGTTGCACTGCCAAAACACTTCTCATGAGCATTTGGATGAGGAAATTAATGAGGATTGTTTGGAGTTGAGGCTTCAAATAGGGCCTAACAAAAATTACAATATGGGATTAATGGATTTAATGTATCATCAAAACAAGAAGAAGCAAAAAGGGGCATTTCATAGTGATTGTTATTATAATTATTATTCTTCACTCACCAACTTTCGCCTTTCTTCTTCATCACCATCTCCCAACTCTGCTGGTTTCTGGTTCTCACTACTCTCTTCACCCAACAGGAAGGGAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGTTGGGTCTCTCCAATCAAGCTCAGGTTGAATTATGGTGCATGGGAGAGAGGCTGTTGCAGACTCAGTCACTAAAGCAAGTGAGAGATGGAATTTGGGTGCCTAAGTTGGTGGAATTCCTAAATTCAAATTCATCATTATCAACTTCTTCAATATTTCACCATTGCTCTCATCTTATGTCTTTGCATTATGGAACAACATCCTTCTTCTAACTCTCTCTCTATATATATATATATATATATATTTATTGTGGACTCAAATTAGATGTAAGTATAGTACTAAATTTCAAATGACGAGGGTCGATATTTCTTTTGCTATTTACTTATATTTATGTGTCCGAAATCAACCATATAAAAGGTAAATTAAGAATATATAGTATGAAAAGTATGTTGAGGGAATATTAGTCTAATTTATTTAAAGAAGTGAAATGATTGTTTATTA ATGGGTTCCCCTTGTTCCCATGATCAGTGGCTAGAGTTGAGTTTAGGATTGAAAGGCACAAAGAAGAAATTACAAGAAAAAGAAGAAGAGGAAACAAAGTTGCACTGCCAAAACACTTCTCATGAGCATTTGGATGAGGAAATTAATGAGGATTGTTTGGAGTTGAGGCTTCAAATAGGGCCTAACAAAAATTACAATATGGGATTAATGGATTTAATGTATCATCAAAACAAGAAGAAGCAAAAAGGGGCATTTCATAGTGATTGTTATTATAATTATTATTCTTCACTCACCAACTTTCGCCTTTCTTCTTCATCACCATCTCCCAACTCTGCTGGTTTCTGGTTCTCACTACTCTCTTCACCCAACAGGAAGGGAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGTTGGGTCTCTCCAATCAAGCTCAGGTTGAATTATGGTGCATGGGAGAGAGGCTGTTGCAGACTCAGTCACTAAAGCAAGTGAGAGATGGAATTTGGGTGCCTAAGTTGGTGGAATTCCTAAATTCAAATTCATCATTATCAACTTCTTCAATATTTCACCATTGCTCTCATCTTATGTCTTTGCATTATGGAACAACATCCTTCTTCTAA MGSPCSHDQWLELSLGLKGTKKKLQEKEEEETKLHCQNTSHEHLDEEINEDCLELRLQIGPNKNYNMGLMDLMYHQNKKKQKGAFHSDCYYNYYSSLTNFRLSSSSPSPNSAGFWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAQVELWCMGERLLQTQSLKQVRDGIWVPKLVEFLNSNSSLSTSSIFHHCSHLMSLHYGTTSFF Homology
BLAST of CcUC02G017330 vs. NCBI nr
Match: KAG6571319.1 (Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 253.1 bits (645), Expect = 2.3e-63 Identity = 149/227 (65.64%), Postives = 170/227 (74.89%), Query Frame = 0
BLAST of CcUC02G017330 vs. NCBI nr
Match: XP_022931988.1 (protein LAX PANICLE 2-like [Cucurbita moschata]) HSP 1 Score: 250.0 bits (637), Expect = 2.0e-62 Identity = 148/227 (65.20%), Postives = 169/227 (74.45%), Query Frame = 0
BLAST of CcUC02G017330 vs. NCBI nr
Match: KAE8652308.1 (hypothetical protein Csa_022227 [Cucumis sativus]) HSP 1 Score: 155.6 bits (392), Expect = 5.1e-34 Identity = 108/181 (59.67%), Postives = 124/181 (68.51%), Query Frame = 0
BLAST of CcUC02G017330 vs. NCBI nr
Match: XP_015879616.1 (uncharacterized protein LOC107415739 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 139.4 bits (350), Expect = 3.7e-29 Identity = 76/138 (55.07%), Postives = 104/138 (75.36%), Query Frame = 0
BLAST of CcUC02G017330 vs. NCBI nr
Match: XP_015879615.1 (uncharacterized protein LOC107415739 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 139.4 bits (350), Expect = 3.7e-29 Identity = 76/139 (54.68%), Postives = 104/139 (74.82%), Query Frame = 0
BLAST of CcUC02G017330 vs. ExPASy Swiss-Prot
Match: G3XKQ9 (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.1e-15 Identity = 43/111 (38.74%), Postives = 72/111 (64.86%), Query Frame = 0
BLAST of CcUC02G017330 vs. ExPASy Swiss-Prot
Match: Q94AY3 (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 9.6e-12 Identity = 35/93 (37.63%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of CcUC02G017330 vs. ExPASy Swiss-Prot
Match: Q9M9Y4 (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11 Identity = 34/90 (37.78%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of CcUC02G017330 vs. ExPASy Swiss-Prot
Match: Q9LS86 (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At3g23060 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.5e-07 Identity = 40/115 (34.78%), Postives = 56/115 (48.70%), Query Frame = 0
BLAST of CcUC02G017330 vs. ExPASy TrEMBL
Match: A0A6J1F0B3 (protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 9.5e-63 Identity = 148/227 (65.20%), Postives = 169/227 (74.45%), Query Frame = 0
BLAST of CcUC02G017330 vs. ExPASy TrEMBL
Match: A0A6P3ZLP7 (uncharacterized protein LOC107415739 isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107415739 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29 Identity = 76/138 (55.07%), Postives = 104/138 (75.36%), Query Frame = 0
BLAST of CcUC02G017330 vs. ExPASy TrEMBL
Match: A0A6P3ZIQ0 (uncharacterized protein LOC107415739 isoform X1 OS=Ziziphus jujuba OX=326968 GN=LOC107415739 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29 Identity = 76/139 (54.68%), Postives = 104/139 (74.82%), Query Frame = 0
BLAST of CcUC02G017330 vs. ExPASy TrEMBL
Match: A0A2I4DPI0 (uncharacterized protein LOC108982202 OS=Juglans regia OX=51240 GN=LOC108982202 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.2e-27 Identity = 70/115 (60.87%), Postives = 87/115 (75.65%), Query Frame = 0
BLAST of CcUC02G017330 vs. ExPASy TrEMBL
Match: A0A6P6TID9 (protein LAX PANICLE 2-like OS=Coffea arabica OX=13443 GN=LOC113701705 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.9e-26 Identity = 71/118 (60.17%), Postives = 87/118 (73.73%), Query Frame = 0
BLAST of CcUC02G017330 vs. TAIR 10
Match: AT5G13250.1 (RING finger protein ) HSP 1 Score: 80.9 bits (198), Expect = 1.5e-15 Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 0
BLAST of CcUC02G017330 vs. TAIR 10
Match: AT2G30580.1 (DREB2A-interacting protein 2 ) HSP 1 Score: 72.0 bits (175), Expect = 6.8e-13 Identity = 35/93 (37.63%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of CcUC02G017330 vs. TAIR 10
Match: AT1G06770.1 (DREB2A-interacting protein 1 ) HSP 1 Score: 71.6 bits (174), Expect = 8.9e-13 Identity = 34/90 (37.78%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of CcUC02G017330 vs. TAIR 10
Match: AT1G06770.2 (DREB2A-interacting protein 1 ) HSP 1 Score: 71.6 bits (174), Expect = 8.9e-13 Identity = 34/90 (37.78%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of CcUC02G017330 vs. TAIR 10
Match: AT3G23060.1 (RING/U-box superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 3.9e-08 Identity = 40/115 (34.78%), Postives = 56/115 (48.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|