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CcUC02G017220 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAATGAGAGAAGAGGTGGTTGGGAGTGGAGGTGGCGAGGTGCTATATAAGGAGGCGATGTTCTGCTCCCACTTTGCTCTCACACAAGTTTAGAATCACATCAATAATGATGAACAAATCCTTCCTCCCCACGCTGCTATTGCTCCTCCTCATCTTCTCTGCTTCGGGTAATTATTATTGTTTATATGTATGATATTTATAATTAAGTAAATTGTTGTAACTTAATTGGAATATATATATACATATGTATGTATGTATGTAGAAGAGATGATGGGTGGTGGTGCTGAGGGTAGAGTGTGCAAGTCCCAAAGCCACAGCTTCCATGGTCCCTGCATGCGCGACCACAACTGCGCCGTTGTTTGCCGCACCGAAGGCTTTTCCGGCGGCGACTGTGTCGGTTTCCGCCGCCGCTGCTTCTGCACTCGCCTTTGTTAATTTTATTAATGTTATTACTTAATAACTTCATAATTTTCCTGCTTATTTTGTACTGCTAAGTACTCTCTACCCTACATATCTCCTACGTCTGTCATCCCCTTTACTTCCCATTTCATCTCAATAAATTACTTTGCTTCATCTCTTCCACCTAATTAATTAAACAAAAACTCTTCCTTCT TGGGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAATGAGAGAAGAGGTGGTTGGGAGTGGAGGTGGCGAGGTGCTATATAAGGAGGCGATGTTCTGCTCCCACTTTGCTCTCACACAAGTTTAGAATCACATCAATAATGATGAACAAATCCTTCCTCCCCACGCTGCTATTGCTCCTCCTCATCTTCTCTGCTTCGGAAGAGATGATGGGTGGTGGTGCTGAGGGTAGAGTGTGCAAGTCCCAAAGCCACAGCTTCCATGGTCCCTGCATGCGCGACCACAACTGCGCCGTTGTTTGCCGCACCGAAGGCTTTTCCGGCGGCGACTGTGTCGGTTTCCGCCGCCGCTGCTTCTGCACTCGCCTTTGTTAATTTTATTAATGTTATTACTTAATAACTTCATAATTTTCCTGCTTATTTTGTACTGCTAAGTACTCTCTACCCTACATATCTCCTACGTCTGTCATCCCCTTTACTTCCCATTTCATCTCAATAAATTACTTTGCTTCATCTCTTCCACCTAATTAATTAAACAAAAACTCTTCCTTCT ATGATGAACAAATCCTTCCTCCCCACGCTGCTATTGCTCCTCCTCATCTTCTCTGCTTCGGAAGAGATGATGGGTGGTGGTGCTGAGGGTAGAGTGTGCAAGTCCCAAAGCCACAGCTTCCATGGTCCCTGCATGCGCGACCACAACTGCGCCGTTGTTTGCCGCACCGAAGGCTTTTCCGGCGGCGACTGTGTCGGTTTCCGCCGCCGCTGCTTCTGCACTCGCCTTTGTTAA MMNKSFLPTLLLLLLIFSASEEMMGGGAEGRVCKSQSHSFHGPCMRDHNCAVVCRTEGFSGGDCVGFRRRCFCTRLC Homology
BLAST of CcUC02G017220 vs. NCBI nr
Match: AHA50468.1 (defensin-like protein 2 [Citrullus lanatus]) HSP 1 Score: 162.2 bits (409), Expect = 1.8e-36 Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of CcUC02G017220 vs. NCBI nr
Match: XP_038900897.1 (defensin-like protein 1 [Benincasa hispida]) HSP 1 Score: 148.3 bits (373), Expect = 2.7e-32 Identity = 72/77 (93.51%), Postives = 72/77 (93.51%), Query Frame = 0
BLAST of CcUC02G017220 vs. NCBI nr
Match: KGN62247.1 (hypothetical protein Csa_016920 [Cucumis sativus]) HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31 Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 0
BLAST of CcUC02G017220 vs. NCBI nr
Match: XP_016902617.1 (PREDICTED: defensin-like protein 1 [Cucumis melo]) HSP 1 Score: 143.3 bits (360), Expect = 8.8e-31 Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 0
BLAST of CcUC02G017220 vs. NCBI nr
Match: XP_022158825.1 (defensin-like protein 1 [Momordica charantia]) HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30 Identity = 68/77 (88.31%), Postives = 69/77 (89.61%), Query Frame = 0
BLAST of CcUC02G017220 vs. ExPASy Swiss-Prot
Match: Q9FFP8 (Defensin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=PDF2.5 PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 8.1e-19 Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CcUC02G017220 vs. ExPASy Swiss-Prot
Match: Q07502 (Defensin-like protein OS=Glycine max OX=3847 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.2e-17 Identity = 46/76 (60.53%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of CcUC02G017220 vs. ExPASy Swiss-Prot
Match: Q40901 (Defensin-like protein OS=Petunia integrifolia OX=4103 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.6e-17 Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 0
BLAST of CcUC02G017220 vs. ExPASy Swiss-Prot
Match: P83399 (Defensin-like protein 1 OS=Vigna unguiculata OX=3917 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 4.9e-16 Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of CcUC02G017220 vs. ExPASy Swiss-Prot
Match: Q9ZUL7 (Defensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PDF2.3 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.1e-15 Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of CcUC02G017220 vs. ExPASy TrEMBL
Match: W5RNL9 (Defensin-like protein 2 OS=Citrullus lanatus OX=3654 GN=PDF2.2 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 8.9e-37 Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of CcUC02G017220 vs. ExPASy TrEMBL
Match: A0A0A0LN65 (Knot1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G340400 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 5.1e-32 Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 0
BLAST of CcUC02G017220 vs. ExPASy TrEMBL
Match: A0A1S4E313 (defensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103499593 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 4.3e-31 Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 0
BLAST of CcUC02G017220 vs. ExPASy TrEMBL
Match: A0A6J1DWX4 (defensin-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111025288 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.6e-31 Identity = 68/77 (88.31%), Postives = 69/77 (89.61%), Query Frame = 0
BLAST of CcUC02G017220 vs. ExPASy TrEMBL
Match: A0A6J1I9R5 (defensin-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111472388 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.2e-30 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 0
BLAST of CcUC02G017220 vs. TAIR 10
Match: AT5G63660.1 (Scorpion toxin-like knottin superfamily protein ) HSP 1 Score: 94.0 bits (232), Expect = 5.7e-20 Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CcUC02G017220 vs. TAIR 10
Match: AT2G02130.1 (low-molecular-weight cysteine-rich 68 ) HSP 1 Score: 83.6 bits (205), Expect = 7.7e-17 Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of CcUC02G017220 vs. TAIR 10
Match: AT1G61070.1 (low-molecular-weight cysteine-rich 66 ) HSP 1 Score: 77.0 bits (188), Expect = 7.2e-15 Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of CcUC02G017220 vs. TAIR 10
Match: AT2G02100.1 (low-molecular-weight cysteine-rich 69 ) HSP 1 Score: 77.0 bits (188), Expect = 7.2e-15 Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of CcUC02G017220 vs. TAIR 10
Match: AT2G02120.1 (Scorpion toxin-like knottin superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 1.2e-14 Identity = 38/71 (53.52%), Postives = 44/71 (61.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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