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CcUC02G017140 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTACTTCACGACTCTCGCAACGATGATGGAATCAAGAGCTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGGTAAGTTGGACATGTTTCTTATGTATTATTACTTTATTGCCAATTTTTGAAGGTGTCGTGCTTATTGTTTTAGTTCAAGAACATGTGGGGTTGGGGAGTGTGGTGCTCGATTTACTATGTTATGTTATTGGTTGATCGAAGTATACCTTAGTTGATTAGGTTACTTTTCCAGAGCTGGGAGATTTACTTGATTCGGTCAGTTTGGAGTGGTATTTCCATTTACTTCTTTTCTTTGTTGGGACCCCTAATAAGGTTGAGGACATTGAAAAACTTATGTGTAACTTCCTTTGGGAAGAGGTGGAAGAAGGAATGGATTGCACCGGGTTAGATGGGAGATCAGTGGATCAGGTCGATTAAAAATTGGTAACTTAAGGACACAAAACAAAACCCTATTACCTAAATGGCTTTGTCATTTTGCTCTTGATTCTAATACCCTTTGGCACAAGGATATTGCTAGCAAGTATGGGCCTCATCCCTTTGAATGATTGTCGGCTGGGGTTAAAGGCACCAACTAGAACTTGTGGAAGGATCTAACGAGTGCCCTTCTTTCTCCCATTTTGTTCGTTGTGTGTGTTGGGGGGGGGGGGGGGGGGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGATAGACCTCTGCTTCCGTTTCCCCCATATTTATCATTTATCCTCCTTTAAAAATCATTTTGTGTCTGACATTTTTATTTGGTTGGGGAGCTTGGTTTCCTTTTCCTTCAGGTTTAGTTGCTTTTTGATTGATAGGGAAGCGACAAATTTCATCTCTTTGTTGTCGTTGTTGGGGGAGTTTAAGGATTCGCATGTTTGGAATCTTGGCCCTCTTGAGGGATTCTACTGACTCTTGTAATTCCTTTTTCCGTTGTCGGCTGGATACTTCTCCTTCCAATGAGGGTTTTTCCCCCTCCTCTAGTTAGAGGATTAAGATCCCCAAGAAGGAGAGATTCTTTACCTAGCCAGTTCTACATGGACGTGTGAACACCTTGTATTGGCTCTCCAGGAGGAAGAGGATGTTGTCGTTGGGGGGCCCTTTCCTGTATTATGTCAGAAGGTGGAGGAAGACCTAAATCACATCCTTTGGAGATGCAAGTTTCGCACTCTGTTTGGAATTTTTTCTTCCAGAAATTTTGTTTTGTGGTTGCCTGTCAAAGGGACATTAGTGTTATGATCGGAGAGTCCCTCCCCATCCTCCTTTTTGTGATAAAGGTCATATGCCCTTGTATCTTTTAATATTTTCTCATTGAAAGTGCTTGCATTATCTTAATACAAAAGTTCTTGCTCAATGGAGTTATATATTTTTACTCGATAACACTTTGACCTTTGAAACAGTACAGTTAAATAAATAAATTGTATCACACTAATGTGAGCATAGATAAAAGGCACTAGTCACCATTTCAAAGGTCGATGGTTTGATCTCTTACCCCACAATTGATGAACTAAAAAGAAATCGCATTCCTTGAGTCTTGATTGTATACATTCATAAAGAAACATAACTGGTCGATTTGTTATGAGATGAGGTTGTCATCGCGAGTTTGCGTGAAGCATGAGATGGGGTGGTGAGGATGGTTTATCTTTTTGAGATCCCTTGTTGTTTAGTCATGTCAGGATGCTCAGATTTAAGGCTCCAATAGATCCCTTCTAAGTGTTATTATTGTTTCTGTAGCACTGGATTGTAACCTATATCTTCTACGAATATTAATTGGTTTTTGGAAATAAAATTGATAGAGTGACTTGAAATCATGTGGTAGAGTTACAAAATATTGTTATTAATTATCTAGTGCAATTGTAACAAGATTTAATCGTAATAATAATTTAACTGCTGAATGAGCTATTTGCAGAAAAACTATGTTTGGGACATACCAAGATTTAATTCCCTCTGAAGTGTCCTTTAGCGTTATGCTTTAACTTGATTGCACCACAGAAAAAATGGCCTAGAATAAGTGATAAATATTTCATGTTAACTTGTCTGTCATCTTCTCCTGATTAATGATTTTAATGTTGTTGTTTTTCCCCCTTCTATTGTGGACTTTTTTTCTTTCATTAGCCAATAAGACCTTTTCCCCTCCCTAAGAAACCAATAAGAGTTTCTGTTTGAATTGAGGAAAAGTGGTGTCAAGAGGGGAGTGTAATTGTTGTTCTGCTTATTTGTAACTGCTATCATAATAGTACGTTCCTGAGTGCTGCCTCCCATCCCCAGCACTACTTACGTTCTATTGGCAGAATTTCCCAATCAATGTATAGGCTATTCCTTTAGTCGGCTATTCTGCCAATTTCCACTGTATATAATTTTTCATAGCAAAGTAACTCCTTGCAGGTGATTTTTCAGCTTTCTTGATTCTCATCTATCGGTAGAATTCTAAGTTAATTAATGAGACAATGAAACGCTGGGTAACCATTTGTTAGTTGGTGTGGTGGGCTTTGGTCTTTTTGGTGTTCCCCATGTTTTCAATGAAGGGCTGTGGCATGAACCTTGTTGTCTTCCAGATATTTTTTCTCTCTATCGTTGCCATGAGTTTTCATTTGATGACAATTGTCAGCTTGATAATGCATGGACATGACTGAAATTGGCTTTGTGAATTTGCAGACTATACTCAATCCCCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTCCGTGCACTCGCAAGGAAGTATCTCTAGCGATCACCTTCATCGCAGACCAAATGTGCTTTATGACACAATAGGCTTCAAAGTTTATAGCAGCCTCAAGTTTTCTTTAATTGCTTAACATTTTAATATGTGCTTTTTGTGGGCCTGATATCAATCAATTCGGTAGTTAAATATCTCTCAACGTGTATTATTGACTTTGGTATGGCTTGGTTACTAGTTGGTATTGCACTTTACACAGTAATGCATTCTCCGCTCCCTTTTATCATCTTTTATCGTAGGGAGGATTATCATTATTTGTTTTTATATTCTAGAAGGCAGTCAATATTAAATTTATGCAAAATATGCATTTTTGAAAAGCTCAAGAGACAGCCCAGTCCTTTTTAA ATGTTACTTCACGACTCTCGCAACGATGATGGAATCAAGAGCTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGACTATACTCAATCCCCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTCCGTGCACTCGCAAGGAAAAGGCAGTCAATATTAAATTTATGCAAAATATGCATTTTTGAAAAGCTCAAGAGACAGCCCAGTCCTTTTTAA ATGTTACTTCACGACTCTCGCAACGATGATGGAATCAAGAGCTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGACTATACTCAATCCCCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTCCGTGCACTCGCAAGGAAAAGGCAGTCAATATTAAATTTATGCAAAATATGCATTTTTGAAAAGCTCAAGAGACAGCCCAGTCCTTTTTAA MLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKRQSILNLCKICIFEKLKRQPSPF Homology
BLAST of CcUC02G017140 vs. NCBI nr
Match: XP_038900562.1 (transport protein particle 20 kDa subunit [Benincasa hispida]) HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CcUC02G017140 vs. NCBI nr
Match: PIN10135.1 (TRAPP 20 K subunit [Handroanthus impetiginosus]) HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CcUC02G017140 vs. NCBI nr
Match: XP_022947789.1 (transport protein particle 20 kDa subunit isoform X2 [Cucurbita moschata] >XP_022970901.1 transport protein particle 20 kDa subunit isoform X2 [Cucurbita maxima] >XP_023534751.1 transport protein particle 20 kDa subunit [Cucurbita pepo subsp. pepo]) HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CcUC02G017140 vs. NCBI nr
Match: XP_016902622.1 (PREDICTED: trafficking protein particle complex subunit 2 isoform X1 [Cucumis melo]) HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CcUC02G017140 vs. NCBI nr
Match: KZV56062.1 (trafficking protein particle complex subunit 2-like [Dorcoceras hygrometricum]) HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CcUC02G017140 vs. ExPASy Swiss-Prot
Match: Q9USZ5 (Transport protein particle 20 kDa subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=trs20 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.6e-11 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of CcUC02G017140 vs. ExPASy Swiss-Prot
Match: A7RVK7 (Probable trafficking protein particle complex subunit 2 OS=Nematostella vectensis OX=45351 GN=v1g94938 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.3e-10 Identity = 28/53 (52.83%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of CcUC02G017140 vs. ExPASy Swiss-Prot
Match: Q3T0F2 (Trafficking protein particle complex subunit 2 OS=Bos taurus OX=9913 GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.0e-10 Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of CcUC02G017140 vs. ExPASy Swiss-Prot
Match: E2QV03 (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris OX=9615 GN=TRAPPC2 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.0e-10 Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of CcUC02G017140 vs. ExPASy Swiss-Prot
Match: Q9CQP2 (Trafficking protein particle complex subunit 2 OS=Mus musculus OX=10090 GN=Trappc2 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.0e-10 Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of CcUC02G017140 vs. ExPASy TrEMBL
Match: A0A6J1I1U1 (transport protein particle 20 kDa subunit isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469735 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CcUC02G017140 vs. ExPASy TrEMBL
Match: A0A2G9GY41 (TRAPP 20 K subunit OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17278 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CcUC02G017140 vs. ExPASy TrEMBL
Match: A0A6J1DTW9 (transport protein particle 20 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111024377 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CcUC02G017140 vs. ExPASy TrEMBL
Match: A0A2Z7DF93 (Trafficking protein particle complex subunit 2-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_06079 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CcUC02G017140 vs. ExPASy TrEMBL
Match: A0A6J1G7X4 (transport protein particle 20 kDa subunit isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451547 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CcUC02G017140 vs. TAIR 10
Match: AT1G80500.1 (SNARE-like superfamily protein ) HSP 1 Score: 106.7 bits (265), Expect = 8.4e-24 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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