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CcUC02G017130 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATCTATGAAGCTGAAGTCGGATCTGCTGTTAAAGTATTTTCTTCTTCTTCATTTTCCATTTCTTTTCATGTTTAGGCTGAATATTTCCTTCACAAGATCGCCAATAATAGGTGATCTCGTTTTGATTCTTTAATTACTTTAGTTTTGACTGTCATTAGTCGCTCATCTTTTTGGCTTGACATGAAAGAGAGAGGATTCCGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTCGACATTGTTCAAGACCTGGCATGGACAACTAGTGCTATGTGAGTTTGTATTCCTTTTAGTTTTTTACTTAATCATCGAGACATCTCCTTTCTCTTCTTTTTCTTTTTTGTTTCTTCCTTTGAATTTCGCCTTAGATCCCTTTTCTTGTTGCGGTTTATGCAGGTTCTTGAAAGCAGTCGATAGGTTCAATGACTTGGTCGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAA ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATCTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTCGACATTGTTCAAGACCTGGCATGGACAACTAGTGCTATGTTCTTGAAAGCAGTCGATAGGTTCAATGACTTGGTCGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAA ATGGCGACCACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCTATCTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCTCAGCTGCATCAGTTTATATTGCATGCGTCCCTCGACATTGTTCAAGACCTGGCATGGACAACTAGTGCTATGTTCTTGAAAGCAGTCGATAGGTTCAATGACTTGGTCGTGTCTGTATATGTAACCGCCGGTCATATCCTTTAA MATTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHIL Homology
BLAST of CcUC02G017130 vs. NCBI nr
Match: KGN62236.1 (hypothetical protein Csa_016951 [Cucumis sativus]) HSP 1 Score: 156.0 bits (393), Expect = 1.4e-34 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of CcUC02G017130 vs. NCBI nr
Match: KAG7034830.1 (Trafficking protein particle complex subunit 2B [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154.5 bits (389), Expect = 3.9e-34 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of CcUC02G017130 vs. NCBI nr
Match: XP_038900562.1 (transport protein particle 20 kDa subunit [Benincasa hispida]) HSP 1 Score: 153.3 bits (386), Expect = 8.8e-34 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of CcUC02G017130 vs. NCBI nr
Match: XP_004147330.1 (transport protein particle 20 kDa subunit [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 8.8e-34 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of CcUC02G017130 vs. NCBI nr
Match: XP_022970900.1 (trafficking protein particle complex subunit 2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 151.8 bits (382), Expect = 2.6e-33 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of CcUC02G017130 vs. ExPASy Swiss-Prot
Match: P0DI81 (Trafficking protein particle complex subunit 2 OS=Homo sapiens OX=9606 GN=TRAPPC2 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.4e-12 Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CcUC02G017130 vs. ExPASy Swiss-Prot
Match: P0DI82 (Trafficking protein particle complex subunit 2B OS=Homo sapiens OX=9606 GN=TRAPPC2B PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.4e-12 Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CcUC02G017130 vs. ExPASy Swiss-Prot
Match: Q3T0F2 (Trafficking protein particle complex subunit 2 OS=Bos taurus OX=9913 GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.4e-12 Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CcUC02G017130 vs. ExPASy Swiss-Prot
Match: E2QV03 (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris OX=9615 GN=TRAPPC2 PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.4e-12 Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CcUC02G017130 vs. ExPASy Swiss-Prot
Match: F1SRI0 (Trafficking protein particle complex subunit 2 OS=Sus scrofa OX=9823 GN=TRAPPC2 PE=2 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 3.4e-12 Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CcUC02G017130 vs. ExPASy TrEMBL
Match: A0A0A0LQF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338800 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 6.5e-35 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of CcUC02G017130 vs. ExPASy TrEMBL
Match: A0A6J1I468 (trafficking protein particle complex subunit 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469735 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of CcUC02G017130 vs. ExPASy TrEMBL
Match: A0A6J1I1U1 (transport protein particle 20 kDa subunit isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469735 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of CcUC02G017130 vs. ExPASy TrEMBL
Match: A0A6J1G7X4 (transport protein particle 20 kDa subunit isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451547 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of CcUC02G017130 vs. ExPASy TrEMBL
Match: A0A6J1G7K7 (trafficking protein particle complex subunit 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451547 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of CcUC02G017130 vs. TAIR 10
Match: AT1G80500.1 (SNARE-like superfamily protein ) HSP 1 Score: 142.5 bits (358), Expect = 1.4e-34 Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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