CcUC01G017070 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G017070
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	homeobox protein knotted-1-like 1
Location	CicolChr01: 29839064 .. 29854940 (+)
RNA-Seq Expression	CcUC01G017070
Synteny	CcUC01G017070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGTTTTCTTCGACGATTTCTTCTTCTTCTTTCTCTACATTTTTATGATGCTGCAACTTTAAAAATCGATCCCTTGGCAATTGAGATCGGCAATTTTGATTCTACAACGAAGTTTGATTATCGTCGCATTTTCTGCAACCAAATTCGTTTTCTTCTTCTTTCTCTCGTATGTTTACCTTCTTATTCTTCTTCTTCCATCTTCTTCCATTTATTAAGTTTCTTTAGAGTGTTCTTTGTTTAGGTTCTTCTTCGTTCTTTTTCAATTGATCGATCTGGATTCAATCTTCTGAACAACTTCTTCTCTTCTTCAATAGGACTTCTTCAATTAATCGAAATTCTATCAGTTAAGCTACTTCATCTTCTTGAATTGATCTCCTTTTTCTTCTTACTTTTCTTATCAATCTTTGTTTAGAATATTCTTTGAGATCACTTTTCAATTACTTTTGAATAAGCTATTAAAATATGCATTTTTCTTCTTGTGTGATTGAGGTGAATTTTTATTTGAAAGAAAAATATAATGAAGGTATTCTTAGAAAATATAATGTAAAAAAGATCGAGCCAAAAGTGTAATTGAATATATATACTCACATACATACGTTCAGCAACTGGACAGAGTAAATATGCCCTCCACCTGAGATATAAGCACGTAATCCATTATATGCGTCGAAGTGTCATTTCTGTGAGGGTACATGAACAGTAATCGAAACATTTTCATCCTCAGATGGGAGTTAAGCATTGATAAAAGGAATCAGTATCATGAACAGTTAAGAATTTGGAGTTTTTTGGTACCAAAAGTGATGGAACGATTAGAAATTAGAAAAAAAGGTAAAGCAAAGGTAAAGATGGGCAAGGGCCTCAGATGTATATGAAATTTTGTACTAACAAAAGCTACCCATTATTCGAGAAACTCCTTCGAAGTGTTACTTTCACGATGCTTAAAAAGACATGAAGGAAGAGAAGAGGGAGCAGAAAAGGCCACACCCACTAGCATCCATTACTATACTGTTCTGACTCGCACTGTTCGTTCTAAAATATATGCATATTTGAGTTGCATGGGTCACTTATTTTGGCTTTACCTCCCTCCCAAATATGTGTAACTCTTTCACTGTTTAACCTAATGCTCACTATTGTCTACTCTCGAGTTGCACAGATGCGGTAACCCCTGATATTTTCTGAAACAACGTCGAAGGAAGTTGAATTTGGGGTGTATTAAGAAGCCTATCTAATGAAGTCTGAGAACGATTGTACAGAAGAACGACAAGAAGCAGAACTAAAAGGCCTACAAGACGAAGACGAAGAAGAAGAAGAAGAAGGCTGGGGAGGAGAAATGTTGCGCAGGAGAATTTCCAGCCACCCCTTGTACGGCCTGTTAGTCGAGACTCACCTCAACTGCTTGAAGGTGAGTTTTAATTATGTGCTTCATCTAATTATGTATAGATGTATATGTGCAGGACAACTATACACGTAGCTAGAGCTTCGACTTTCTTAAGGGGCCATTTGTTCTCTAAAAATTTAGATAATTGAAATCTTTAGAGGTTTATAAATAGATATTCAAAATGATTTTCAACATCTGTTTGTTTTGTTGAGAATATTTGGATTCATGTGTTTGTTTTATAAGATTTTTCTACTAAAAATATATTGAAAATACAAAATGTTTTAAGAATGCGCTCAAGAGTATTCATTAATATGTAATTAATTTAATATAATTTAGACTTATATAATATATATTTTTATTAATTTTAATTTCTTTTTAAACTAATATTGTTTATATTATTTTTATATGTTATTTTTCTCAATAAAATAACATATATTAATTTAAATTTTTTTTATAAAATGAATATTAATTTGTATTTAAATTTGAATATCTTTCTTTAAAAAAAATAAAAACTATGATTTAATTAAAAAGAGTGATATATATGGTTGACAATATGTATCTTAATTATAAAATACAAATAAAAAAATGTGATTGTATAAGAAAAATGAAGGGTAAAGAAGTAAAAATAGGATGTTCTCGACATGGGAATCCAGAAAATTCATGTTTCATGAAGGCATCTAAAACTCTTAAGATGCCCTATGTAAGGGCATCTTATGATGCCAGAGAATATCTAAGTGTCAAAGTATCTTATATTACCATGAAACAAACATGATAATCTAGATGCCTACTATGTAAGAATATTCTTGGATAACTGGAAACAAATGGTCCTGAAAGGCATCTTTTAGAAAACAAACCTCTTGTTGTAAGTAGGTCGAATTAATTTACAACAATTAAACAAGTGGAAAGCCTTTATTATTAATAAAGACAACTTAATTATATTATTACGGTGTTCACCTTTTTCATGGTTGCTTTTCGGTTGTTCTATAATGGTGATCCAAATTTTTTGTTAAAAGTAAGTAATTCCAATAATTCATAAATAGACTTATCACACCCCTTCCCAGATTAACCTCTTTAACCCAAAAGGAGACGTGAAGACAACAAACGTCACCCTCTTGTGATGCTTACTGCCCGTCTCATACTATTATCACTCAGCCACCCATACCAAGCTTAAGAAGCAAGTATGCAACAATTAACAATTCATTTAATAAATATACAATTCTTTTAACAAGTTTACAACTTATTTTACAAAACTCAGTACTATCTAGTAAAAGAGCGACTATCCTGTGGCAAACCTCGACTTCACGCAGCAACGATGACTCTTCTGCTACCTGAGAAGAAAAACATAAAGAAAAAAGTGAGCTAGAAGCCTAGTGAGTGGTGAACAACATATAAGCAAAGGATACTTCTCGATCCTTACCAATTAAGCAAGCACAACATCAATCAAACATAACGAGGTCAACTACTCAAACCTCAGCACCAGTGTTTTTTTTTTTCTTTAATATCGTAATCACTCCCTGCTGGCTTCCTCTTGGCACAACATACCGTCTCTTTTTCTATGTGCACATAGACATACCTCTTATGGGCTCAGAAGCTAAACCCGTCGATTCTCTGATCATCCCACGCGAGGTTTTTCTCATAAGCTCATAATCTAGGTCCTTGTGACCCTTTGACCATCCTATGAGATTAAGCCACAGACTTGGATTTTAGATCCTTAGATCCTCCAACCATCCCATGCGTAGTTCTATCATAGGCTCAGAAACTAGATCCGAAGATCCTCTGACCATCCTGTGAGGCATTTCCTTTTCTCACCATACAAACAACATTATTATGTAAGGAAACAACATTAACTCTTAAAAGAAAACCAACAGTAGATATGGATTTTGGCCTTCAAATCCTTTCAACCTTGTCCCAAACTCTTTACCCTGCCAAAACGGAGCTTGCTTTTCACCCTTGAGCACACAGTTAAGTTTCTAATACAAAAGAAACAACAAAAGGCCCTTAAACAGCAGGCTGGATGCCTAGAACAACCCTTCTGGATGTTTGGATGCCTCTTTGGATGTCTGGACAGCTTGTCTTGGATGCCTAGCACAAGTGTTAGATGTCTGGTACAAGTGTTGGGCGCCTGGTTCACCTCTTTGGACGCCAAGTAGTCCTTTGCTTCTTCCCCGACCAAAGTACTCTCTTCCTTCAAACCTCTCTCTAGATAATTATGTGTAGTTTCACGGCCTCAAGTCCTATTTATAGACTTAGGAAACTCGTCTTTGTCATCCAACTCTCTCCCTAAGTTTGACACTTAAACTCCTAAGTGTCTTCACCATGCATAACTAACACATGCATGCTGCCAACTCCTTTTTCAAATTTGTCTAAGTGTCCAACTATTGTGAAACTCACCTTACAACACAACACCTTCTACTTTGGCACTTAGTCAAATTTATGCTATGCTGGCACTTCACCTCTTAAGGTGTTCACCTCAGAGTTAGCCACCTCCTCCTTGAATTTCAACCTTTTGGATGCCCACCTAAGCCTTTATTAAGACCTTTCATCTGTCCATCTAGGCACGGTTTCAACCAACTATGGGTCCAACTAGCCCTTGTCGTGTGTCCAACTTGTTTCCCAATGCTTCCAATGTCACCTTTTAACCTACATGAACTATCCAACACTTGACCAAATTTGCACCTTAGTTAGAGTATGCATCCAACTCTCTATGCTTGCATCTTGGCCTAAGTGTTTTTCCTTTAACTAAGGTAGGTTGCTCAACACTTAGCCAAAATTTCACCCATAATCAAGCTATGCGTCCAACTTCCTTATTTTGGCCTAAACGTCACCTTTCAACTATCATAAGTTGTTCAACACTTAGCCAAAAACTTCTCAAGACATAAACCATGCATCTATAATGCACCTGTCACACTCCCTTCAAGATTATCCTTTTAAAGCCAAAAAGAGGCGTGAAGATAGTAAATATCACCCTTTTGTGATATCTACTATCCATCCTTTAGTACCCATGAGCTTCTCTAACATGTTTAACCAACGGTCATATAATAAGCTTAACTCATAATTGAAGTTTATACAACTCAACCAAAGTTTATACAATTTTTCTTAAACATAATTTTACAGAAACATAACCTTAATCCTAACTTCCTATGAGATAAGCTATCTATGACAGACCTCAATATCTTGCTGCAAAAGAAACTCCTCTGCTACCTGAGAAGGAAAAACATAAAAGATAAGGATGAGCTAAATAGGTCAGTGAGTGGTTAAACACATAACAACGGGTAACACGCGGCCCTTAACAATTAAAAAACATAGTAGCAATTATCCAGAAATAATATCAATCACAATCGAGGATATCTACTCAAAGCCCAACCACAAAGCTCATCTTAGTATCGTACTTTACTCTGTTGGCTCCTTTTGGCTCAGTTATTCAATCCGTACTTTATGTGCACATAAACTTACCTTCGAGGGATTAGAAACTAGACCCGTTGGTCCTCTGACCATCCCACAAGAGGTACGTCCCACAGGATCAGGAACTAGGTTTTCGGTAACCCCCTGACCATCCCGTGAGGTTCTATCTTTGACATAGGATAAAAAACTAGATCCTCTGACCATCCTGTGCACCCTAACTTTCCTTTGCTTTGCATCATCACATCACACAATTAAACTGTAAGGAAATAACAGTACTACTAAGAAAAGTAACCACTCACAATAATTAGAGTTCCTCTCTCCAAGACTCTTTCTATAGCCTTTGAAGCTCAAAAGCTACAACTAATAGCACTCTAGACGCCAAAAACCCTGCCTTGGACGCCTAGAGCTACCTTTGGATGCCTAACAGATGGATTGGATGCCTAACACCCTTCTAGACACCTGAGATACTTGTGTTGGACGCTTGGGAGGTTTGTTGGATGCCTAGTCCTTCTCAAAATTTCTCCCGAGAACACTCTCAAGTTTCTCAAAGTTCTTAGAATCAATGTTCAAGTGTATATGCAAATGAAATCCTAAGCCCTATTTATAGAAGTGGAACTCAAGCCTTGTCATCCATGCCTTCATCCTTGGTTTGACATTTAACCAAAGTAGGTGGCTTCATCATGCCTTATATCTTCGTGTAAGTTGACACCTCTTACTTTTGAGGTGTTCAACTACTAGATTGCCACCTCCTACTCTTCTTTCCACCATTTTGAACGCATGCTTAAGTCATATTTGAGCGTTACCATGCGTCTACCATGGTTTTAATATGCGTCCAATACGTGTCATCTCCATGCTTTGCGCTCCATGCTTTGCGTCCAAGATGTGTCATCTCCATGCTTTGCGTCCAACTTGCTTCTAAGCACACACCATGCGCTCATCTAGCCTACACCATGTGTTCCTTTTAGTCCATCTATGCATCCATGATGGTCCTTTCCGAGCTTATTCGCACAATCTTTCTTCTCTTTATGCGTTCCACTTTTGTTCCCTTAGGGTACACTTCATTTGCTTCCTACATGAACTATTCAAGATTTAGCCATTTTTCCTCCAAGGTTTAGGGTATGCGTCCAACACACCCAAAATCACCTTATGTTTAGCCAAATTCTCATCTTGCTAGCCTCCTATGCGTCAAACTTTTTGGATTGTGCAATGTGGCCTAACTCATCACTTCCTATGAACCATACGTTCAACTCACAAGCTCCAAGTCTCTTGTACTTGGTCAATTTTCCAACTCACTTAGCCTTCTATGCATAATAGAGTCCTTAAAATTCTAAGTATAGCAAGTTAACCCTAGGCAGGCACCTCAGCCATGCACAACACGTGCACTGTCTGCTCAGCCTCCCATGTGCGTCAATTCATGCACGGCACCTTGCTGCGTATGCGCAGACACCCCACTGGCCGACAGCTCCCGCACAGAGATAGGCACACAAACCTCCAAAGACACAACACACACGTCCTTGCACACACACTATCAGGTTGGGCGTTGAGCTCCCTCGCACACATAGCTGACTAGGCGTCAATCACCCGCACACTCAGCGTCAATAGTGCCCTCTTGATGCCCACGTGTTTCCTAGATGCTTGCTTCCCTACATGCCCGCACGACTGCTTGTCTGCCTACACGCCGTATGGCTACTTGTCTGCTAAGTACAACTGGTAGAGTTGAAGGAGGATTTTTCTTATGAAGAAAAGCTGATACAAGTCCTGAGAAGGAACAAGTGCTAAGAAATAAAGTGATTCCTTTGGTAAAGATTCTTTGGAGGAACCATGGCGTTGAGGAAGCCACTTGGGAGACCAAAGATCAAATGATCAAGACGTATACATATTTGTTCTCATGATGCTTGTACCTACTGAATTTTGAGGACGAAATTTGTCACACCCCCTTATTGATACCCTTCTGATCTAGAAAGAGATGTGAAGATGACGAGCATCACCCCTTTTGTGATACACGTCATCTGTACCAGTCCTGACATACCTGATAAACATGATGATAACAATTGATATTATTCTAGTATTCATAACTTAACAAAACTTCAGATGTCGCTTACGACACCTAATAGAGCATACATTGATAAAATCAAGAATTTCAGTCCTAACTGGTCTTAGAGGTACATTACCCAATTACACCTGATAAGCACGTATAACTTTAGTATAGTAAATTCAGATAGTCCAACATCGAGGAAATATATATACAAACACCTAACAAAGGTTAAAGCCCTCTTATGGGTAACGCAATCACATGACTTAATTACATAACCCATAACCCAACTACATATGTACATTCCAACCAAAACCTACTAACATACTATGTACAAAGGAAAAACAATGAAACTCTGACGATAATGGCAGATGTGCTCATGACGGCTAGGTCCTTGAAACTCCTTGGCTACCAAGGGGTAAAAGAAAACATAAGGAAAAAGCTGAGCTGAGATAGCTAAGTGAATGACGAGTTTAGAAAATCTTAAGATACTTATAAATATTGAATAAAGGTTCAAAACATTCTTTGATAAACATGCTTAGAAAACTTAATAGCAAAACAACCTCAAAGCTTTCAGAAACTCAACAATATTAACATGTTAGAAAACTAGCATTTTTAGCGTTCATATTCATATTCATAAAAACATCCATTGAGTCAGAGTACATCAGTTAACCACCGCATAAATGTATCCAAACCTTAGTTAAGGTGGAGCAAACTCAACACACTCAACGTCAATAACCTTATTTGATGTAGACCGAACTCAATACAATCATCGTCAATACTTTCATACATGCACATAGAACTGCCCCCAAAGGGCCTAACACCCCTACACACGGCCCAAGCCTTAGGTGCACCAAGGTGAGTCCCAAAGACCTTTCCAAATGCCTTCTCCTTGTCCTTCAACATTGAATACTTGGGCTGCCCGAATGCCTTCTCCTTGTCCTTCACCAACGGGTCCCTAAATAACATTTGACTCGAATACAAGTAGGTGAAGTTTTACAATGCAAACATATATAACATGCTTTAATACTTAAAAGACACTTCAAACCACACCTGCTTGCAAATACTTTGAACACATATTATGCTTATAAACATACTTTACAAAGCAAACTTGCATACTTAAACATATTATGCTTGAACACTCTTAAACTTAAAACATATTTGTACTTCCATGCTTAAAACACATTTCCATATCTTCAAATTCACAATAAGTTCACAAACTTATAGGAAGATCGCTTTGTAAGGCTTGCAATTAAAATCACATATTGATAGCAAATCTCATCCAACATAGAAAAACACCCTTTAAGCTATTTAAGAAACATTTTAAGTAAAACTTGTCACCCACAGATCCCTTTTTGATCCCTTGGCCTATAAGCATCTCCTATTGCCAATTGACCTGAAAATCAGACCACCGGCTTTCAATAACCTTCCTTGAGCCAACCATGTAAGCCTAGCACATCATAGTACCTAGCATTCGTCCCTAGAACTTCATTTAATTCCCAAAATTTCATAACTTAGAGTTTTTAGCATATTTTCCCTAAATTCCTTAAAATAGCCTAAAATTAGCTTAGGGTCCAAAAATACTTATTTTATAGCAAATAATTCAAGAAAATATGATTCGAACCGCAAAAATAACTCAATTTGACCTAAAATGGTCGTGGGCCTTCACATGGGTAGCTTGGGGCGCTGTGAGTGTGCGTTGGCACAAGGATGGCGGGTAGAGCATGCGCACTGGGCGGGCTCTGGGCATGCAGGCGTGGGGCACTGGGCGTTTGGTGTGGGCAGCCTGCTTCCCCTGCTTCGACAAAACACATCCATCACAAAACTAGCTCGATTTTACTCATTTATTAACCAAATTACTTCAAAAAATTTTCATAAATCTCTTAAGAAATATCTTAACTTACTACCTAAAAAATTGGGCTTCAAATTCCTCTTGGTTTGCGAAGAATTAACCAAAAACCCAAGGTCGTTCCAGATTTCTTCGAAAACTTCGAACCTCCCTGTTTTTCCTATTATTTCACAAACTTCTACTCATTATTGGTACAAACATCCTTTTTAAGAAATATTAAGGAGTCTCTTAACTTACTAACCTCAAAATTATAGCTTCTAAATCATCTTCTACCGTTCGAAAACTTCAAAACAGCATAGCTCGTTCAGATTGCTCAACACTGCACATTTCCTCTTCTACCACGAAAATTATCGAGTTCCCAATCTCTATTTTTCAAGGTAGCCAAAGAAATCACTCTTCACTCACTCCTCTGCAATTAGGTTGAAAAATTTCAAAATTTGCACGGACGAAGTGATAAAGCTGAAGCAAAAGCGCATCACCGACTACATGCTACTACATATGAGACTTTGAACCTCCTCCCATTTTTTTTTTTAATTTTAGAATTATCCTCTTTCCATTTTTAATCAATTCTCTTTTTTTTTTCTTAACTTAATTTAATTAATTATTAAATTTTAATTTACTTAAGTGTTTATTTATAATTATTTTTATTAAAATCAATTTATTTTCCAACTTAATCCCTTTGATTCAACTTGATCCTTTAATTTTCATTCTCAACACTCAAGCATACAAATAACCTTAGTTGAAAGAGTAAAGAGAAAAGTTTTAGTGCTTACACCATATTTGAAAGAATAAAGAGAAAAGTTTTAGGGCTTACAAAATTCCTATAAGAAGGTGGTAAATTGTAAGGCCTACTCTCATTCCTAAGTTATTAAGCTAAGTAAGTTGACTAAGTGTGTGGACTTAGAGAAAATTTTCTTTGTTAGGCTCAAGGATGCATGGAGGAGAGTGTCACATGTTTTTGGCAAGTTTCTATCAATATTTGTGGTATATTTGTTGTTATTTTTAAAGAAAAAATTTGAGAAAAAAAGTTTTGTTGAGATTTTTGGTAATTGAAAAATTTCTTGTAAATTTCAATTGTTACATAAGATTAGTGAGAGTTTTTTTCTTCAACTCAAATTAAGAATGGTAAATTAAAAAAAAAAAGAAACTTAAACTATTCTCTTACGAGAGTTCTCATAAATTTAATTGGAATTAGAATTGGTTAAAAAAAATTAAACTATAGCTTATGGAAATTCAAATTGGTTAACTTAAACTAACTAAATTTAAGTTTTAAAAAATTGGAATTGGTTTAAATTAAAGAACTTCGATAAAAGAAATATTAAACTAACTTAATTTAAGGAAAAAGATGAAATTGGCTTTAAAAAAAATTATGGAAAAATTTCTTGTAAGAATTTTTAAGAAAAATCTTGATAAGTCAACCTTATAGGAAATTTTGGCAAGTCAAGTCAATCCTTATGGGAAATTTTGGTAAACCTATTTTGACTTTGGTGAACTTTTTTTTCTTTTTGAAAACTTACACTAAATCTTGGCTACCAATTAAGATTTTTGTTAGCGTTGATTTACCAAGATTATTTCTAAGAAATTTTTTTTCGCAGAATTATATTTTTATTAAATTTAAATGAATTGACTTTAATTTATTTACAATTATTAATTTTGAGTTGAAAAAATCTCAGAAATTTCTCTTAACAATTGGAATTTACAAGAAAATTTTTTCTTCCAATTTTTTTCTATAAAAAATAACAACAAATCCACAAATAATGGTAGAAACTTGAAAAAAAAAATATGAAGACAAACAAAATAAAACATTTTAAAATTGAAGTTAGTTATAAAAACTTGTGTAAGGTAAATGTGAAACTGGAGGTACTTAAATAAAAGACAAAATGTTATTTTCATTAGGTGGAACTTCCACTCAAAATCTGTAAAAGTAAGAAAAATGTTAGAAAATAAAATTTTTGGAAAAGAGGTTAGTTTTAGGTGAGAAATAACAATTTTCTAAATAGTTGTTAGACGCGTCAAATAACAAGCGTTGGCAGATGGCATTTCTACCCACGCATATTGGAAACATGTCCGTGAAAAGTTGACGTTGTAGTTAACTTGGAACATGGGGCAGAAAAAAGGTGCTTGTGTCATGATACCTGCTTACCAAAAAGGTGTCGAAACCCATCTTTGTGTTTGCAGAGATAGCTTATGGTGACACATTCTACTTGTGTTGCTATCTTTTGAACCAAACATCTAGTGCCGCTTAGCTTGTAGCGTCATTGGCAAAGATAGCTTCTAACGACACTTAATTAGTGTCGGCAAAGACCATTTATATATGGAGACGCATTTTATACATGCGTTAGTAGCAATTAAAAAATGCAGCATGTAATTATTTTAATAAATATCAATTTTTTATAACTTTGTAATTATGCACAAAATAGAAGTATTTTTTAATTTTCATTGAAAGTATGATCAACCAAATATTTTTTTTGTCACACCCCCTCCCAGGTACCTTCTTAACCCAGGAAAAAGTGCGAGGACAACAGACACTGACCCTCTTACGGCATCCATTGCCAGCCTTATACCTTGACCAAGACCTAATAAGCAGCTATACACAATAATTGAACATTCAACTATAATCAGGGTTAAGCTATCATGATAATACAGATTTACATTCAACCTTTAATTTACACAAGTTCACTAACTTTCGCCCTTAACCCTCTATATGTACAACATAGGTTTAAGATCAAATATTTACAATTCTCAAAATTCACAGACGCAAATAGTGGTAGACCCAGACGAGTTGCTGTGTAGGCTAAGTACCCTGGACTTGCTTGTTACCTAGAAAACAGAAAAACAAGGAAAACATGAGCTAGGATGCCCAGTGAGTGACATATCTAGTAAAAACCTTCCTTTAACTCGGAAGCTAATCAAACTATAATCATTCTATGACAATGTGTTAATAACATCAATTCAAAGTCATATCCATGCAAAACATGCTCAAGTGGCATTGTCATACCATATATGTTCATTTCAGAACAGAGTCTATCATCCCTCTGTGTGCACATAAATATCATATCCTGGGTTACCCGAATACCTTCTCCGAGTCCTTAGTATCAGGTCCCATATACGAGACTTAGGCCACCCACATGCCTTTTCCGAGTCCTTCAGCATTGGGGGCTATCTCCATACTCAGGTTACCTAATGCCTTCTCCGAGTCCTTCAACATTGGGAACCATTTCTACATCCCGGCTACCCACATGCCTTCTCCGAGTCCTTCAACATTGGGAGCCTTTCTTTTAAAACATAAATCAAAAGTAACATGCTTTGAAAATAACGTAATAAAAATTCACAAGTTTATAATGTCTCAAACTTTCACAGATTCCTTAACAATCATCATACTTCAATAAAATCAGAGCTTTTATACAAACTTGGTTAACAACTAACATGCTTTGAACATTTCTGATGCAAAACCATAATATACACTTATATGGAAACACGTACTTCTTTTAAGCAAATAAGCATCATAGCATATTTAAAACCCGTGAAAAGCATAAACATAATAAAATGTTTCCAAGCAACGGTAAATAGCATGAAAACTTTGTATAAAGCATGCTTATCTTAAATAAAATTGTCACTCACTACTTGTCTCGGGCTCTTAGCGGGTTATACGCCTTTCCTAGCTCCTCTCGGCCTGAAATAATATGTTTACCTTTGTTAGATTTCCTTAAAATTCCTTTTTACATAGGAAACAAGTCTTAGACATTCATATTATTCGCCACCGAGACCCTACTACATAAAGAAAACCATCACTGAGATTATATTCCATGAAGAAATGCTCAACCGAGGCTATATTTCATTAAAAGGTTCACTAATGAACAAGATTCGAGCTATTAGCGAGACTAAACTAGCAAAAACAAGCAAAAACCAATTGTACTAGCGAGACTGTGGACGAGCGAGACCAGCGAGGCTTATCTCGCTCTTGCTCCTCCACATTCCCAGTATCGTCCAACTTTCTAGCGAGACTCGCCTTCTTCTGCTGTTAAAAGTCGTATTTCCAGCCCGAATTAGAATTTTTTCCCTTCTACAAACTTGTAGAGAAATATGTTTTCTAACTTACCTCAAAATTTTAGAGCTTATCTTCTCTTCCTTCGACAGATATTCCCAATTTACTTCTCCTTGCTCCAGATCACTCGGGAAATCCATATCAATTGCTTCCACCTAAAATTTAACATGTTTCTCTTCATATTCAGCTCAACTATCCTTCACAAGAGTTGTTAAGAATTAAGTCAAATTACTAACCTCAAATTTTCAGCTTCAAACTCTGTCTCTTCTGCTCGATATTCACCAAACACCAAACCTTGTTTACTGCGCGACAGCAAGCAACCCTTCTGCTTCAACTTCAATTTCACCATGAAACCGACCAAAATCTTACACGAATCTGCCCCTGATATCTTCTTCTACCCCCCCTCGATGCCCAGCTGAAGAATAGAATTGGTTTGAGCTTGAAAATGGAAGAAAAATTAGTTGGCAACTTCCCAATCTAAAAGTAAAACTCGACCGACTTCCTCCCACTATCTCTTTTTTTTTTTTTTTTTTTTAATTCATTTATTAATTTTCCTGTCTTTTCTTTTTCTTTTCCTTTCCTTTCTTTTATTTTTCTTTCTTTTTAATTTAGGAGGGAAAAAAAAGAAAAACAAAAAGAAAATCCGTTTTTACATCCTAATTAATATTCAAAGTAAATTCTAACTCGGTTTCCTCTTAATGACTTAAATATTCAATTTACCAAAAATTACTTCCGACTTCCTCCACTTTTTCCTTCGATCTACAAGAGGAAGAACAAGTAAATAAGTTTACAGCGATACTAAGTACTAATGTTTAGTCGTTACAAATGAAAGTAGGGTTTACATTTTTTGTTTATAAAATGTTGTAGAAAGCATTACAATAACATTCACTTATAAAAAAATACAACATGTTAGTCTTTGGTAAAAATAAAATCACATTTACAACCATATATTCTAAACGTCATTGGCAAATCATCCTCGTACTTTGACATTGAATCATCTAATTAAATAAAAAAAAAAATTAACTAGTTTCAATGAGTAGTTCAATAATAATAAATAACATTTAAATCTAAAAAGAAACAAAATAGTGACTAAAAACTTAATTGTAACACATATCAAACAACCCTTTCAACCATGCATACGACTAAAAACTTACTCTAAAATTTTAAACTAAATAACGTTTAGATATAAAATAAGCATAATGTTATCTATCAGTTAAAGTTAACACCAAAATCAAAACTAAATAACACTTAGAATTACAAATGAACAAAATATTCTTAAGCTTAACACTACTTTGATCAAATAATATTTTACCTACATGTACTAATTAAGTAACATTTAGAACAAAAAATGAAAAAACAAATTAACACTGAAACTCAAATGAAGTAATATTTAGATCTAAAGAATGAGATAATTGTTTTAAATGACAAAACTACTGAAAATGTTTTCAAGTATAGCAAAATGTCACTATCTATAAACAACAATAAGATACTAATAGACATCTATCAATGTCTAAACAATAGATAATAGTAGTCTATTAGGGTCTATCACTGTCTATCACTATCTATTACTTAATCTTAACACCGAAATTAAAACTAAACAATATTTATAGTACCTACACACTCACATCTACTCAAAACAATCATAAACTGCTACTATAACTTTTTTATTTTTGAAAATAGCCATATTTTTTAAAATAACCCTATAAAATGAGCCAAAATGTTATCTATTAATCAATAAATTTCCAAATAATACAAATACATAACTATCATAAATAATACAAATACATAACTATTTTGTTCCTACCATAATTGCAGGACAACAACATACAACATTCTCATGCACTTACAAATAAACCTATTAATAATCAAAATACATAAAATAACTATTTATGTTACTATATTAACATACAACACTTTCTCATAATTAAAAAAGAAAAAAAAAAAAGAAAAAAAGAAAAACCCTACTAATACTATAAATACTGCACTATAAAATAACACATATATTCGATTTCACAAGTTTATTATAACACGAGAGATTAGCTCAAGCCTATTTCAAAGTTCCTCCTCTGTTTCTAAATAATATTAATTATCTAAACATTAAAGATTGAAGCATATAATATATACATAGCCAATGCAGAGGTGTGTACGTGTGCGTGAACCCGAAGGTGACAAAAATATTAAAACTTATATGATATATTCAGGTTGGAGGTATAGGCAAATTGGAAAGAGGTTACTTAGTTACGGATTTGATCAAACAACAGGATAACAAGATCAGAAGCTTCAATCTGCATAACCAATCAGAGTTAGATCGCTTCATGGTATATGCACCTCCATCATACTAATAATTTGTAGTAACTACTGATGGCATATATAGTGACATGTATTCTTATCACACGCGTACACTTAGGTGCACATGCCAATTCTAATGCTTTGAAGCTTAGCTTGCTCAAGATAGTTAGAATTATTTATGAAGAACAATTTTGCAATTTCAATATATTAATGTCCTAGCATCAATTATATGCATTATTCAATGACAACTTTTATTTCGTAAAATTAGCTAAAAAGATAATAGAACTTAAAGAGGTTTGTGTTACATGTCCTAATTTAAAGTTACAGTCGAGTAAAAAAAATTGAAAATTTTGGGGTCAAGTTAATTAGTTGAGTGTGTCTACAGAGATTTAATTTAGGCAGAAGGGAAAGGAAATGGTCGATTTTAGCTCCTCTCCTTTCTCCCTATGTTGGGACATAATAACTTTTCAGAACATGAATATATGTGCAGGAAACCTATTGCTTTGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAATCAATGGCGTTCATAAACAGAATGCACTGGCAATTAAGGGAGCTCACGACCACCGGTGCGGCAGCAACAGCCAAGAAACCCACCACCTCATCTTCTAATGACAAAAACTGAAGCCAAGCGAAGTAGAATATATGATGGGCGATACGAGAGTTGTTTTCTAACCTACTTACGGAGTATGGACCAAGTTCTCTCACATGGATATGTAAAAACAACTGTAATATTATTAGCTTTGTGTTTCTGACATTAAGGAGGACAATTGTTGTGTGGCTGCGATATATATTAGTGGTCGAGAATAATATATATTGAATTATTATTATTGTTGTCAATCCACCAC

mRNA sequence

CATGTTTTCTTCGACGATTTCTTCTTCTTCTTTCTCTACATTTTTATGATGCTGCAACTTTAAAAATCGATCCCTTGGCAATTGAGATCGGCAATTTTGATTCTACAACGAAGTTTGATTATCGTCGCATTTTCTGCAACCAAATTCGTTTTCTTCTTCTTTCTCTCGTTCTTCTTCGTTCTTTTTCAATTGATCGATCTGGATTCAATCTTCTGAACAACTTCTTCTCTTCTTCAATAGGACTTCTTCAATTAATCGAAATTCTATCAATGCGGTAACCCCTGATATTTTCTGAAACAACGTCGAAGGAAGTTGAATTTGGGGTGTATTAAGAAGCCTATCTAATGAAGTCTGAGAACGATTGTACAGAAGAACGACAAGAAGCAGAACTAAAAGGCCTACAAGACGAAGACGAAGAAGAAGAAGAAGAAGGCTGGGGAGGAGAAATGTTGCGCAGGAGAATTTCCAGCCACCCCTTGTACGGCCTGTTAGTCGAGACTCACCTCAACTGCTTGAAGGTTGGAGGTATAGGCAAATTGGAAAGAGGTTACTTAGTTACGGATTTGATCAAACAACAGGATAACAAGATCAGAAGCTTCAATCTGCATAACCAATCAGAGTTAGATCGCTTCATGGAAACCTATTGCTTTGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAATCAATGGCGTTCATAAACAGAATGCACTGGCAATTAAGGGAGCTCACGACCACCGGTGCGGCAGCAACAGCCAAGAAACCCACCACCTCATCTTCTAATGACAAAAACTGAAGCCAAGCGAAGTAGAATATATGATGGGCGATACGAGAGTTGTTTTCTAACCTACTTACGGAGTATGGACCAAGTTCTCTCACATGGATATGTAAAAACAACTGTAATATTATTAGCTTTGTGTTTCTGACATTAAGGAGGACAATTGTTGTGTGGCTGCGATATATATTAGTGGTCGAGAATAATATATATTGAATTATTATTATTGTTGTCAATCCACCAC

Coding sequence (CDS)

ATGAAGTCTGAGAACGATTGTACAGAAGAACGACAAGAAGCAGAACTAAAAGGCCTACAAGACGAAGACGAAGAAGAAGAAGAAGAAGGCTGGGGAGGAGAAATGTTGCGCAGGAGAATTTCCAGCCACCCCTTGTACGGCCTGTTAGTCGAGACTCACCTCAACTGCTTGAAGGTTGGAGGTATAGGCAAATTGGAAAGAGGTTACTTAGTTACGGATTTGATCAAACAACAGGATAACAAGATCAGAAGCTTCAATCTGCATAACCAATCAGAGTTAGATCGCTTCATGGAAACCTATTGCTTTGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAATCAATGGCGTTCATAAACAGAATGCACTGGCAATTAAGGGAGCTCACGACCACCGGTGCGGCAGCAACAGCCAAGAAACCCACCACCTCATCTTCTAATGACAAAAACTGA

Protein sequence

MKSENDCTEERQEAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGGIGKLERGYLVTDLIKQQDNKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLRELTTTGAAATAKKPTTSSSNDKN

Homology

[Close]

BLAST of CcUC01G017070 vs. NCBI nr
Match: XP_038896017.1 (homeobox protein knotted-1-like 2 [Benincasa hispida])

HSP 1 Score: 226.1 bits (575), Expect = 2.1e-55
Identity = 125/153 (81.70%), Postives = 129/153 (84.31%), Query Frame = 0


Query: 1   MKSENDCTEERQEAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVG 60
           M+SEN CTEERQE ELKGL  EDE EEE GW GEMLR +IS+HPLY LLVETHLNCLKVG
Sbjct: 1   MESENGCTEERQEPELKGL--EDENEEEGGWEGEMLRTKISNHPLYSLLVETHLNCLKVG 60

Query: 61  GIGKLERGYLVTDLIKQQDNKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKSMA 120
           GI         TDLIKQQDNKIR FN  NQSELDRFMETYCFALSKLKEAMEESQLKSMA
Sbjct: 61  GID-------ATDLIKQQDNKIRCFNPLNQSELDRFMETYCFALSKLKEAMEESQLKSMA 120

Query: 121 FINRMHWQLRELTTTGAAATAKKPTTSSSNDKN 154
           FIN MHWQLR+LT TGAAATAKKPTTSSSND N
Sbjct: 121 FINSMHWQLRDLTGTGAAATAKKPTTSSSNDTN 144

[Close]

BLAST of CcUC01G017070 vs. NCBI nr
Match: XP_022137557.1 (protein KNATM [Momordica charantia])

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48
Identity = 110/141 (78.01%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 13  EAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGGIGKLERGYLVT 72
           E E K LQD   EEE+EGW GE+LRRRISSHPLYGLLVETHLNCLKVGGIG ++RGYL T
Sbjct: 10  EGEQKVLQD---EEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLAT 69

Query: 73  DLIKQQDNKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLREL 132
           D+IKQQDN IR  N  NQSELDRFMETYCFALSKLKEAMEESQ+KSMAFIN MH QLRE+
Sbjct: 70  DVIKQQDNNIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQIKSMAFINSMHSQLREI 129

Query: 133 TTTGAAATAKKPTTSSSNDKN 154
             T AA  A KPTTSSS+D N
Sbjct: 130 PATSAA--AHKPTTSSSSDTN 145

[Close]

BLAST of CcUC01G017070 vs. NCBI nr
Match: XP_022974318.1 (homeobox protein KNOX3-like [Cucurbita maxima] >XP_022975290.1 homeobox protein KNOX3-like [Cucurbita maxima])

HSP 1 Score: 181.8 bits (460), Expect = 4.5e-42
Identity = 97/132 (73.48%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 19  LQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGGIGKLERGYLVTDLIKQQ 78
           LQ + EEE++   GGEMLRRRISSHPLYGLL++THLNCLKVGGIG+L+RGYL  DL++ +
Sbjct: 12  LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHR 71

Query: 79  DNKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLRELTTTGAA 138
           +N+IR  N  NQSELDRFME+YC+ALSKLKEAMEESQLKSMAFIN M+ QLRELT TGAA
Sbjct: 72  ENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLRELTATGAA 131

Query: 139 ATAKKPTTSSSN 151
             AKKPT +SS+
Sbjct: 132 --AKKPTAASSS 141

[Close]

BLAST of CcUC01G017070 vs. NCBI nr
Match: KAG7028461.1 (Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.0 bits (458), Expect = 7.6e-42
Identity = 103/152 (67.76%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MKSENDCTEE--RQEAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLK 60
           M S N  T++  R + +LK       EEE++G  GEMLRRRISSHPLYGLL+ETHLNCLK
Sbjct: 1   MDSGNHSTDQPLRVQLQLK------HEEEDDGVDGEMLRRRISSHPLYGLLLETHLNCLK 60

Query: 61  VGGIGKLERGYLVTDLIKQQDNKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKS 120
           VGGIG+L+RGYL  DL++ ++N+IR  N  NQSELDRFME+YC+ALSKLKEAMEESQLKS
Sbjct: 61  VGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKS 120

Query: 121 MAFINRMHWQLRELTTTGAAATAKKPTTSSSN 151
           MAFIN M+ QLRELT TGAA  AKKPT +SS+
Sbjct: 121 MAFINSMNSQLRELTATGAA--AKKPTAASSS 144

[Close]

BLAST of CcUC01G017070 vs. NCBI nr
Match: KAG6596993.1 (Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.6 bits (449), Expect = 8.4e-41
Identity = 101/152 (66.45%), Postives = 121/152 (79.61%), Query Frame = 0


Query: 1   MKSENDCTEE--RQEAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLK 60
           M S N  T++  R + +LK       EEE++G  G+ LRRRISSHPLYGLL+ETHLNCLK
Sbjct: 1   MDSGNHSTDQPLRVQLQLK------HEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLK 60

Query: 61  VGGIGKLERGYLVTDLIKQQDNKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKS 120
           VGGIG+L+RGYL  DL++ ++N+IR  N  NQSELDRFME+YC+ALSKLKEAMEESQLKS
Sbjct: 61  VGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKS 120

Query: 121 MAFINRMHWQLRELTTTGAAATAKKPTTSSSN 151
           MAFIN M+ QLRELT TGAA  AKKPT +SS+
Sbjct: 121 MAFINSMNSQLRELTATGAA--AKKPTAASSS 144

[Close]

BLAST of CcUC01G017070 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 62.0 bits (149), Expect = 6.7e-09
Identity = 42/131 (32.06%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 28  EEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGGIGKLERGYLVTDLIKQQDNKIRSFNL 87
           E+ +   +++ +I+SHPLY  L++T+++C KVG    +E   ++ ++  Q++N +   ++
Sbjct: 61  EDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVG--APMEIACILEEI--QRENHVYKRDV 120

Query: 88  HNQS------ELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLRELTTTGAAATA 147
              S      ELD FMETYC  L K K  +     ++  FIN++  QL+ L T  A+ATA
Sbjct: 121 APLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATA 180

Query: 148 KKPTTSSSNDK 153
                + S+D+
Sbjct: 181 LSDDGAVSSDE 187

[Close]

BLAST of CcUC01G017070 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-06
Identity = 34/104 (32.69%), Postives = 55/104 (52.88%), Query Frame = 0


Query: 35  MLRRRISSHPLYGLLVETHLNCLKVGGIGK----LERGYLVTDLIKQQDNKIRSFNLHNQ 94
           +++ +I+ HP Y  L++ +++C KVG   +    LE     +D+ KQ+   + S      
Sbjct: 84  VIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQE--VVPSSCFGAD 143

Query: 95  SELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLRELTT 135
            ELD FMETYC  L K K  +     ++  F+N++  QLR L T
Sbjct: 144 PELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCT 185

[Close]

BLAST of CcUC01G017070 vs. ExPASy Swiss-Prot
Match: F4HXU3 (Protein KNATM OS=Arabidopsis thaliana OX=3702 GN=KNATM PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.1e-06
Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 2   KSENDCTEERQEAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGG 61
           K EN   E  ++     L++E +EEE      E+L++RISSHPLYGLL+ +HLNCLKV  
Sbjct: 5   KDENSILENMKQEINHSLKEEAQEEE------EILKKRISSHPLYGLLLHSHLNCLKVCS 64

Query: 62  IGKLERGYLVTDLIKQQDNKIRSFNLH-------NQSELDRFMETYCFA 104
            G  +   ++       D  +   +LH         SELD+FM  + F+
Sbjct: 65  -GDFDSPEIMN---TADDLALSKLSLHPDSSSEATSSELDQFMVLFFFS 103

[Close]

BLAST of CcUC01G017070 vs. ExPASy Swiss-Prot
Match: Q41853 (Homeobox protein rough sheath 1 OS=Zea mays OX=4577 GN=RS1 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.0e-06
Identity = 34/110 (30.91%), Postives = 58/110 (52.73%), Query Frame = 0


Query: 34  EMLRRRISSHPLYGLLVETHLNCLKVGG-IGKLERGYLVTDLIKQQDNKIRSFNLHNQSE 93
           E ++ +I +HP Y  L+  +L+C KVG     LER   +T +  + D      +     E
Sbjct: 88  EAIKAKIVAHPQYSALLAAYLDCQKVGAPPDVLER---LTAMAAKLDASAAGRHEPRDPE 147

Query: 94  LDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLRELTTTGAAATAK 143
           LD+FME YC  L K +E +     ++M F+ R+  QL  ++  G +++A+
Sbjct: 148 LDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSAR 194

[Close]

BLAST of CcUC01G017070 vs. ExPASy Swiss-Prot
Match: Q75LX9 (Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0673500 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-05
Identity = 31/103 (30.10%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 35  MLRRRISSHPLYGLLVETHLNCLKVGG----IGKLERGYLVTDLIKQQ-DNKIRSFNLHN 94
           M++ +I SHPLY  L+   ++C KVG     +G+L    +VTD+ +   D  + +     
Sbjct: 70  MIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTDVPQYSGDRCLPAQQPAA 129

Query: 95  QSELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLREL 133
             ELD+FMETYC+ L++  + +     ++  F   +  Q+  L
Sbjct: 130 DPELDQFMETYCYMLTRYGQELARPIQEAEEFFRGIEEQIDSL 172

[Close]

BLAST of CcUC01G017070 vs. ExPASy TrEMBL
Match: A0A6J1C8K6 (protein KNATM OS=Momordica charantia OX=3673 GN=LOC111008979 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.9e-49
Identity = 110/141 (78.01%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 13  EAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGGIGKLERGYLVT 72
           E E K LQD   EEE+EGW GE+LRRRISSHPLYGLLVETHLNCLKVGGIG ++RGYL T
Sbjct: 10  EGEQKVLQD---EEEKEGWEGEILRRRISSHPLYGLLVETHLNCLKVGGIGDMDRGYLAT 69

Query: 73  DLIKQQDNKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLREL 132
           D+IKQQDN IR  N  NQSELDRFMETYCFALSKLKEAMEESQ+KSMAFIN MH QLRE+
Sbjct: 70  DVIKQQDNNIRCLNTLNQSELDRFMETYCFALSKLKEAMEESQIKSMAFINSMHSQLREI 129

Query: 133 TTTGAAATAKKPTTSSSNDKN 154
             T AA  A KPTTSSS+D N
Sbjct: 130 PATSAA--AHKPTTSSSSDTN 145

[Close]

BLAST of CcUC01G017070 vs. ExPASy TrEMBL
Match: A0A6J1IFV6 (homeobox protein KNOX3-like OS=Cucurbita maxima OX=3661 GN=LOC111472956 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.2e-42
Identity = 97/132 (73.48%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 19  LQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGGIGKLERGYLVTDLIKQQ 78
           LQ + EEE++   GGEMLRRRISSHPLYGLL++THLNCLKVGGIG+L+RGYL  DL++ +
Sbjct: 12  LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHR 71

Query: 79  DNKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLRELTTTGAA 138
           +N+IR  N  NQSELDRFME+YC+ALSKLKEAMEESQLKSMAFIN M+ QLRELT TGAA
Sbjct: 72  ENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLRELTATGAA 131

Query: 139 ATAKKPTTSSSN 151
             AKKPT +SS+
Sbjct: 132 --AKKPTAASSS 141

[Close]

BLAST of CcUC01G017070 vs. ExPASy TrEMBL
Match: A0A6J1G133 (homeobox protein KNOX3 OS=Cucurbita moschata OX=3662 GN=LOC111449708 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.1e-41
Identity = 101/152 (66.45%), Postives = 121/152 (79.61%), Query Frame = 0


Query: 1   MKSENDCTEE--RQEAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLK 60
           M S N  T++  R + +LK       EEE++G  G+ LRRRISSHPLYGLL+ETHLNCLK
Sbjct: 1   MDSGNHSTDQPLRVQLQLK------HEEEDDGVDGDTLRRRISSHPLYGLLLETHLNCLK 60

Query: 61  VGGIGKLERGYLVTDLIKQQDNKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKS 120
           VGGIG+L+RGYL  DL++ ++N+IR  N  NQSELDRFME+YC+ALSKLKEAMEESQLKS
Sbjct: 61  VGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKS 120

Query: 121 MAFINRMHWQLRELTTTGAAATAKKPTTSSSN 151
           MAFIN M+ QLRELT TGAA  AKKPT +SS+
Sbjct: 121 MAFINSMNSQLRELTATGAA--AKKPTAASSS 144

[Close]

BLAST of CcUC01G017070 vs. ExPASy TrEMBL
Match: A0A1S3TM14 (homeobox protein knotted-1-like 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756745 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 20  QDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGGIGKLERGYLVTDLIKQQD 79
           QD+DEEEEEE    E+L+RRISSHPLYGLLVE HL+CLKVG I  LER   +  +   Q 
Sbjct: 22  QDDDEEEEEEEKNNEILKRRISSHPLYGLLVEAHLDCLKVGDISNLERELKIDQM---QA 81

Query: 80  NKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLRELTTTGAAA 139
            + ++  + +QSELD FME YC AL KLKEAM E Q KSMAFIN MH QLRE+T     A
Sbjct: 82  TEKKNLGMFSQSELDLFMEAYCLALGKLKEAMVEPQQKSMAFINNMHSQLREITNPTLPA 141

Query: 140 TAKKPTTSSSNDKN 154
            + +P+  S++  +
Sbjct: 142 PSSEPSPPSASSSH 152

[Close]

BLAST of CcUC01G017070 vs. ExPASy TrEMBL
Match: A0A0S3TBY5 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G222000 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.7e-26
Identity = 72/134 (53.73%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 20  QDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGGIGKLERGYLVTDLIKQQD 79
           +D+DEEEEEE    E+L+RRISSHPLYGLLVE HL+CLKVG I  L+R   +  +   Q 
Sbjct: 22  EDDDEEEEEEEENNEILKRRISSHPLYGLLVEAHLDCLKVGDISNLQRELKIDQM---QA 81

Query: 80  NKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLRELTTTGAAA 139
            + ++  + +QSELD FME YC AL KLKEAM E Q KSMAFIN MH QLRE+T     A
Sbjct: 82  TEKQNLGMFSQSELDLFMEAYCLALGKLKEAMVEPQQKSMAFINNMHSQLREITNPTLPA 141

Query: 140 TAKKPTTSSSNDKN 154
            + +P   S++  +
Sbjct: 142 PSSEPAPPSASSSH 152

[Close]

BLAST of CcUC01G017070 vs. TAIR 10
Match: AT1G14760.2 (KNOX Arabidopsis thaliana meinox )

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-14
Identity = 52/138 (37.68%), Postives = 78/138 (56.52%), Query Frame = 0


Query: 2   KSENDCTEERQEAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGG 61
           K EN   E  ++     L++E +EEE      E+L++RISSHPLYGLL+ +HLNCLKV  
Sbjct: 5   KDENSILENMKQEINHSLKEEAQEEE------EILKKRISSHPLYGLLLHSHLNCLKVCS 64

Query: 62  IGKLERGYLVTDLIKQQDNKIRSFNLH-------NQSELDRFMETYCFALSKLKEAMEES 121
            G  +   ++       D  +   +LH         SELD+FME YC  L +LKEAME+ 
Sbjct: 65  -GDFDSPEIMN---TADDLALSKLSLHPDSSSEATSSELDQFMEAYCSTLRELKEAMEKP 124

Query: 122 QLKSMAFINRMHWQLREL 133
             ++  F++ ++ QL ++
Sbjct: 125 LTETHRFVDAVYTQLNDI 132

[Close]

BLAST of CcUC01G017070 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 62.0 bits (149), Expect = 4.8e-10
Identity = 42/131 (32.06%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 28  EEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGGIGKLERGYLVTDLIKQQDNKIRSFNL 87
           E+ +   +++ +I+SHPLY  L++T+++C KVG    +E   ++ ++  Q++N +   ++
Sbjct: 61  EDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVG--APMEIACILEEI--QRENHVYKRDV 120

Query: 88  HNQS------ELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLRELTTTGAAATA 147
              S      ELD FMETYC  L K K  +     ++  FIN++  QL+ L T  A+ATA
Sbjct: 121 APLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATA 180

Query: 148 KKPTTSSSNDK 153
                + S+D+
Sbjct: 181 LSDDGAVSSDE 187

[Close]

BLAST of CcUC01G017070 vs. TAIR 10
Match: AT1G14760.3 (KNOX Arabidopsis thaliana meinox )

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-08
Identity = 41/131 (31.30%), Postives = 61/131 (46.56%), Query Frame = 0


Query: 2   KSENDCTEERQEAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGG 61
           K EN   E  ++     L++E +EEE      E+L++RISSHPLYGLL+ +HLNCLK   
Sbjct: 5   KDENSILENMKQEINHSLKEEAQEEE------EILKKRISSHPLYGLLLHSHLNCLK--- 64

Query: 62  IGKLERGYLVTDLIKQQDNKIRSFNLHNQSELDRFMETYCFALSKLKEAMEESQLKSMAF 121
                                               E YC  L +LKEAME+   ++  F
Sbjct: 65  ------------------------------------EAYCSTLRELKEAMEKPLTETHRF 90

Query: 122 INRMHWQLREL 133
           ++ ++ QL ++
Sbjct: 125 VDAVYTQLNDI 90

[Close]

BLAST of CcUC01G017070 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-07
Identity = 34/104 (32.69%), Postives = 55/104 (52.88%), Query Frame = 0


Query: 35  MLRRRISSHPLYGLLVETHLNCLKVGGIGK----LERGYLVTDLIKQQDNKIRSFNLHNQ 94
           +++ +I+ HP Y  L++ +++C KVG   +    LE     +D+ KQ+   + S      
Sbjct: 84  VIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQE--VVPSSCFGAD 143

Query: 95  SELDRFMETYCFALSKLKEAMEESQLKSMAFINRMHWQLRELTT 135
            ELD FMETYC  L K K  +     ++  F+N++  QLR L T
Sbjct: 144 PELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCT 185

[Close]

BLAST of CcUC01G017070 vs. TAIR 10
Match: AT1G14760.1 (KNOX Arabidopsis thaliana meinox )

HSP 1 Score: 52.8 bits (125), Expect = 2.9e-07
Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 2   KSENDCTEERQEAELKGLQDEDEEEEEEGWGGEMLRRRISSHPLYGLLVETHLNCLKVGG 61
           K EN   E  ++     L++E +EEE      E+L++RISSHPLYGLL+ +HLNCLKV  
Sbjct: 5   KDENSILENMKQEINHSLKEEAQEEE------EILKKRISSHPLYGLLLHSHLNCLKVCS 64

Query: 62  IGKLERGYLVTDLIKQQDNKIRSFNLH-------NQSELDRFMETYCFA 104
            G  +   ++       D  +   +LH         SELD+FM  + F+
Sbjct: 65  -GDFDSPEIMN---TADDLALSKLSLHPDSSSEATSSELDQFMVLFFFS 103

The following BLAST results are available for this feature:

BLAST of CcUC01G017070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896017.1	2.1e-55	81.70	homeobox protein knotted-1-like 2 [Benincasa hispida]	[more]
XP_022137557.1	1.4e-48	78.01	protein KNATM [Momordica charantia]	[more]
XP_022974318.1	4.5e-42	73.48	homeobox protein KNOX3-like [Cucurbita maxima] >XP_022975290.1 homeobox protein ...	[more]
KAG7028461.1	7.6e-42	67.76	Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596993.1	8.4e-41	66.45	Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC01G017070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46640	6.7e-09	32.06	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]
Q84JS6	1.4e-06	32.69	Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ...	[more]
F4HXU3	4.1e-06	36.70	Protein KNATM OS=Arabidopsis thaliana OX=3702 GN=KNATM PE=1 SV=1	[more]
Q41853	7.0e-06	30.91	Homeobox protein rough sheath 1 OS=Zea mays OX=4577 GN=RS1 PE=2 SV=1	[more]
Q75LX9	1.6e-05	30.10	Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of CcUC01G017070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8K6	6.9e-49	78.01	protein KNATM OS=Momordica charantia OX=3673 GN=LOC111008979 PE=4 SV=1	[more]
A0A6J1IFV6	2.2e-42	73.48	homeobox protein KNOX3-like OS=Cucurbita maxima OX=3661 GN=LOC111472956 PE=4 SV=...	[more]
A0A6J1G133	4.1e-41	66.45	homeobox protein KNOX3 OS=Cucurbita moschata OX=3662 GN=LOC111449708 PE=4 SV=1	[more]
A0A1S3TM14	2.0e-27	55.22	homeobox protein knotted-1-like 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC10...	[more]
A0A0S3TBY5	1.7e-26	53.73	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G...	[more]

BLAST of CcUC01G017070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14760.2	1.9e-14	37.68	KNOX Arabidopsis thaliana meinox	[more]
AT1G70510.1	4.8e-10	32.06	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT1G14760.3	5.9e-08	31.30	KNOX Arabidopsis thaliana meinox	[more]
AT1G23380.1	1.0e-07	32.69	KNOTTED1-like homeobox gene 6	[more]
AT1G14760.1	2.9e-07	36.70	KNOX Arabidopsis thaliana meinox	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 21..130
None	No IPR available	PANTHER	PTHR11850:SF290	FUSED COMPOUND LEAF 1	coord: 21..130
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 83..134 e-value: 5.0E-8 score: 42.7
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 88..133 e-value: 4.8E-7 score: 29.2
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 34..74 e-value: 4.8E-7 score: 39.4
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 37..60 e-value: 1.0E-6 score: 28.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G017070.1	CcUC01G017070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding