CcUC01G016650 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G016650
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	UPF0426 protein At1g28150, chloroplastic
Location	CicolChr01: 29339834 .. 29342173 (+)
RNA-Seq Expression	CcUC01G016650
Synteny	CcUC01G016650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAACAAGGCGAATTGAAGCCATTACCTTAGGCGGAACGCAAATATCTTCATCCTCTTCTTCCATTCTTGAGTCAATCAGAAACAGCCCCATTAGCGTCATCAGAGAGATTACCCATGGCCGCTCTTCTTCTTCCCTCCTCTTCGGCTACGAGCGTTCTGGTATGCCCATCTCTACTCTTTAATTACTTTCGCTCTTTTTTTATAATTGCCTCTTACTCCTCTTCTTCGGCGTGATTGAAAGTTTGGAGAAATAGGGAAAGTAAAGGCACAGAATCATCATTCGATTTTATCATCCAACAAACCTATGCGCGGTAATTATCTTCGTCTCGGCTGCAATCAATCTACAAATGGCATCTCCGCATTTTTCTTCAATCCTGTTGAGGATCCCGTTATCAAAGAAGCTCTTAAGGTATCCTATATTAACTCTTACATGAAAAACCCTTCCTGAGTTTTGGCTGTTGTGTTCATTCGCCTACTTTCTACTTGGATTAGGGTCTTGATTGCTTAGTATGTTCAAAATATAGAGGTCTCAATTAATTTCCCATAGCATTTAAAAATTGATAAATCCTGGCCTCTTCGAGTAGAGTTACAAATGCGAGTTAAGATAGATGAATGGATGGATCTAAGATTTTTCTAGTTATGTCATGTCGTGTTGAAACTATTAGAACTATGTAGGACCGTAGAGAAGATTTTCACTGTATACAAAACTCAATTTAACCATTCTATCTCTCTGATGACTACGACTGCATAACATAAGTCTTATTGAACTAACTCTTATAATCCGCAAATAATGATCTAGAACCAACTTCAAAGGAGAAAAAGATATGCCTTATATGATCTGTAAGGTTAATTGCTGAGAAAAATGTGTAAAGATCTATATAGTTTGTTAACTCCTAGTAATAGAGAACTTCAATTAAATGGAAATTTTGGCAATTCAGTATTTTCTCACCTGACTCCACTTTATCAAATCCTTTAAAACCATGTTTTTCACATTTACGAATCTATATTGGTTACCGTTGAACCAAAATCCTACAGGAAGAAGATAATAAGTCAGTCGTTGTATTGGTTTTTTTGTTTTCTGCTGCCACAGTGACGAAGCATTCACAGATGAAGCTTAAAAGTGTACACTACTCTGGCTACTTATCTCCGAGAAAAAACCTCCTCTTCTACACTTATACTTGATTCATACCATACAAAAGACTGAAACTAAACACTTTTTACATTAAAACTTCCCCTGCTCTGTGATTTGTGTCTCTATACTACTTGGTATTCGAATTCTGTCCATCAATGAAATCTAAGTAGAACTGTCCCAATGGATGCGCACAAGATTGATAAGTCCTGTTCTGGCTGGAAGAATCCAGCATTGGTGCTTCATCACATATAGTTCTGGATGATATGTCAGGACACGATTTGAATTATCTGAGTTTGGGAGATTTTTATTCTTCTGATTCTTGCCTTGTTTAGTAAGATTGAATTTTGCTAGAAAGCTTATGGACATCGCATCTCTAAGACCCATCATCATCCCCATGGTGCATTCGCTTTCACACTCATGATGTTGTTGAACTGACTGTTTGGCACAGGCTCGTCTTTGGATTGACTTTCTTAAGTGCTTAAATACTTTATTAAACACTTAGAAAGTTAATCCAAACGAGCTCATAATATGGGTTGTTTTTCAAAATTCTTACCGCTATGGAGACTGCTGAAGCCAAAAGTAAACACCACTTCATTATGTCAAATACATTTCCATAGAACTGAAGCAGTCCCAATCACTTTTTGCGACTGAACATTTTAGAGTTTGTGGGTTTTTCGTCATTTATAACTAAATAAGCCATCCCAGTTCAAACTCTTACCGTTCAATTAGCATTAGGCTTCGTTAGCTGAATTCTTTAGACGAAAACAGTCACTTCAATAACTTTGATTTTCCGTTGTGTCTTTTGTAACTGATCGTTTATAGTTCGTATCAAAAATATCATGCGAAAGTAAAGTAATTTCAATTGTTGTAGGAGCCAGTTGCCTTCGCCGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATCTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGCGGAATCAGCTGGACTCACGGAAGAGATTGATACTCAAGAATCTGTACTAGAGGATGGTCCAACAGAGATCGAGATTGAGTGATCCCATGAATGGACCTAACCTCGTATGGTTCTTATTTATTACAATAATATATAAACTGGAAAAGTGGGAATAGAATGATATTTGATTTGATTTAGTATTACTACTGCTCCCTTGATTTATAACAAGAAGTGAATCTGAATTAGGAGTTAACCATTTTTC

mRNA sequence

AAGAAAACAAGGCGAATTGAAGCCATTACCTTAGGCGGAACGCAAATATCTTCATCCTCTTCTTCCATTCTTGAGTCAATCAGAAACAGCCCCATTAGCGTCATCAGAGAGATTACCCATGGCCGCTCTTCTTCTTCCCTCCTCTTCGGCTACGAGCGTTCTGGGAAAGTAAAGGCACAGAATCATCATTCGATTTTATCATCCAACAAACCTATGCGCGGTAATTATCTTCGTCTCGGCTGCAATCAATCTACAAATGGCATCTCCGCATTTTTCTTCAATCCTGTTGAGGATCCCGTTATCAAAGAAGCTCTTAAGGAGCCAGTTGCCTTCGCCGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATCTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGCGGAATCAGCTGGACTCACGGAAGAGATTGATACTCAAGAATCTGTACTAGAGGATGGTCCAACAGAGATCGAGATTGAGTGATCCCATGAATGGACCTAACCTCGTATGGTTCTTATTTATTACAATAATATATAAACTGGAAAAGTGGGAATAGAATGATATTTGATTTGATTTAGTATTACTACTGCTCCCTTGATTTATAACAAGAAGTGAATCTGAATTAGGAGTTAACCATTTTTC

Coding sequence (CDS)

AAGAAAACAAGGCGAATTGAAGCCATTACCTTAGGCGGAACGCAAATATCTTCATCCTCTTCTTCCATTCTTGAGTCAATCAGAAACAGCCCCATTAGCGTCATCAGAGAGATTACCCATGGCCGCTCTTCTTCTTCCCTCCTCTTCGGCTACGAGCGTTCTGGGAAAGTAAAGGCACAGAATCATCATTCGATTTTATCATCCAACAAACCTATGCGCGGTAATTATCTTCGTCTCGGCTGCAATCAATCTACAAATGGCATCTCCGCATTTTTCTTCAATCCTGTTGAGGATCCCGTTATCAAAGAAGCTCTTAAGGAGCCAGTTGCCTTCGCCGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATCTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGCGGAATCAGCTGGACTCACGGAAGAGATTGATACTCAAGAATCTGTACTAGAGGATGGTCCAACAGAGATCGAGATTGAGTGA

Protein sequence

KKTRRIEAITLGGTQISSSSSSILESIRNSPISVIREITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGPTEIEIE

Homology

[Close]

BLAST of CcUC01G016650 vs. NCBI nr
Match: XP_038893812.1 (UPF0426 protein At1g28150, chloroplastic [Benincasa hispida])

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 102/126 (80.95%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 38  ITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVE 97
           + H  S++S+LFG    GK+K +NHHSILSS+KP+RGN+LRL CN  TNGISAFFFNPVE
Sbjct: 5   LLHSSSATSVLFG--EMGKLKGRNHHSILSSDKPVRGNFLRLRCNNPTNGISAFFFNPVE 64

Query: 98  DPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGP 157
           DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKT ESAGLTEEIDTQ SV EDGP
Sbjct: 65  DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEIDTQGSVQEDGP 124

Query: 158 TEIEIE 164
           TEIEIE
Sbjct: 125 TEIEIE 128

[Close]

BLAST of CcUC01G016650 vs. NCBI nr
Match: XP_008439829.1 (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo] >KAA0036065.1 UPF0426 protein [Cucumis melo var. makuwa] >TYJ98872.1 UPF0426 protein [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 7.6e-48
Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 38  ITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVE 97
           + H  S++S+LFG    GK+KA++HHSILSS KPMR ++LRLG N STNGISAFFFNPVE
Sbjct: 5   LLHSSSTASVLFG--EMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPVE 64

Query: 98  DPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGP 157
           DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKT ESAGLTEE+DTQ SV EDGP
Sbjct: 65  DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQEDGP 124

Query: 158 TEIEIE 164
           TEIEIE
Sbjct: 125 TEIEIE 128

[Close]

BLAST of CcUC01G016650 vs. NCBI nr
Match: XP_004137400.1 (UPF0426 protein At1g28150, chloroplastic [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-44
Identity = 96/126 (76.19%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 38  ITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVE 97
           + H  S++S+LFG    GK+K +NH+SILSS KP+R ++ RLG N STNGISAFFFNPV 
Sbjct: 5   LLHSSSTASVLFG--EMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVG 64

Query: 98  DPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGP 157
           DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKT ESAGL EE+DTQ SV EDGP
Sbjct: 65  DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQEDGP 124

Query: 158 TEIEIE 164
           TEIEIE
Sbjct: 125 TEIEIE 128

[Close]

BLAST of CcUC01G016650 vs. NCBI nr
Match: XP_022924196.1 (UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata])

HSP 1 Score: 184.5 bits (467), Expect = 7.3e-43
Identity = 93/126 (73.81%), Postives = 103/126 (81.75%), Query Frame = 0


Query: 38  ITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVE 97
           + H  S++S+L G    GK +  N HSI S  KPMR N LRLGC+ STNGI AF FNP+E
Sbjct: 5   LLHSSSTASVLLG--GMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLE 64

Query: 98  DPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGP 157
           DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKT ESAG+TEE+DTQ SV EDGP
Sbjct: 65  DPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQEDGP 124

Query: 158 TEIEIE 164
           TEIEIE
Sbjct: 125 TEIEIE 128

[Close]

BLAST of CcUC01G016650 vs. NCBI nr
Match: XP_023518976.1 (UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.2 bits (461), Expect = 3.6e-42
Identity = 92/126 (73.02%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 38  ITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVE 97
           + H  S++S+L G    GK +  N H I S  KPMR N LRLGC+ STNGI AF FNP+E
Sbjct: 5   LLHSSSTASVLLG--GMGKFREGNRHLIFSPKKPMRANCLRLGCSNSTNGICAFLFNPLE 64

Query: 98  DPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGP 157
           DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKT ESAG+TEE+DTQ SV EDGP
Sbjct: 65  DPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQEDGP 124

Query: 158 TEIEIE 164
           TEIEIE
Sbjct: 125 TEIEIE 128

[Close]

BLAST of CcUC01G016650 vs. ExPASy Swiss-Prot
Match: Q9FZ89 (UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g28150 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.7e-19
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 54  SGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVEDPVIKEALKEPVAFAG 113
           SG V +Q HH   S+   ++ N L     + T    +  FN  ++P++ EALKEP+AF G
Sbjct: 13  SGVVVSQLHHHQFSAG--VKSNELWFRPTRRTLISKSSCFNLPQEPILSEALKEPIAFLG 72

Query: 114 GLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVL---EDGPTEIEIE 164
           G+FAGLLRLDLNE+PLK+WV +T E++G+TEE    + V+   ED P +IEIE
Sbjct: 73  GMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGVVSNDEDSPQQIEIE 123

[Close]

BLAST of CcUC01G016650 vs. ExPASy Swiss-Prot
Match: P74786 (UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ssl0294 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.7e-06
Identity = 26/67 (38.81%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 99  PVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTE--EIDTQESVLEDG 158
           PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K     G+T+    D  ++  ++ 
Sbjct: 8   PVTRELCQQPIAFAGGFVSGVLRLKLTDDPLKKWLQK----QGVTDFSGADINQTAQDNR 67

Query: 159 PTEIEIE 164
           P  I+I+
Sbjct: 68  PQSIDID 70

[Close]

BLAST of CcUC01G016650 vs. ExPASy TrEMBL
Match: A0A5D3BGH6 (UPF0426 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00680 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.7e-48
Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 38  ITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVE 97
           + H  S++S+LFG    GK+KA++HHSILSS KPMR ++LRLG N STNGISAFFFNPVE
Sbjct: 5   LLHSSSTASVLFG--EMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPVE 64

Query: 98  DPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGP 157
           DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKT ESAGLTEE+DTQ SV EDGP
Sbjct: 65  DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQEDGP 124

Query: 158 TEIEIE 164
           TEIEIE
Sbjct: 125 TEIEIE 128

[Close]

BLAST of CcUC01G016650 vs. ExPASy TrEMBL
Match: A0A1S3AZP7 (UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.7e-48
Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 38  ITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVE 97
           + H  S++S+LFG    GK+KA++HHSILSS KPMR ++LRLG N STNGISAFFFNPVE
Sbjct: 5   LLHSSSTASVLFG--EMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPVE 64

Query: 98  DPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGP 157
           DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKT ESAGLTEE+DTQ SV EDGP
Sbjct: 65  DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQEDGP 124

Query: 158 TEIEIE 164
           TEIEIE
Sbjct: 125 TEIEIE 128

[Close]

BLAST of CcUC01G016650 vs. ExPASy TrEMBL
Match: A0A0A0LT92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.9e-45
Identity = 96/126 (76.19%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 38  ITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVE 97
           + H  S++S+LFG    GK+K +NH+SILSS KP+R ++ RLG N STNGISAFFFNPV 
Sbjct: 5   LLHSSSTASVLFG--EMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVG 64

Query: 98  DPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGP 157
           DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKT ESAGL EE+DTQ SV EDGP
Sbjct: 65  DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQEDGP 124

Query: 158 TEIEIE 164
           TEIEIE
Sbjct: 125 TEIEIE 128

[Close]

BLAST of CcUC01G016650 vs. ExPASy TrEMBL
Match: A0A6J1E8W6 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431718 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.5e-43
Identity = 93/126 (73.81%), Postives = 103/126 (81.75%), Query Frame = 0


Query: 38  ITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVE 97
           + H  S++S+L G    GK +  N HSI S  KPMR N LRLGC+ STNGI AF FNP+E
Sbjct: 5   LLHSSSTASVLLG--GMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNPLE 64

Query: 98  DPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGP 157
           DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKT ESAG+TEE+DTQ SV EDGP
Sbjct: 65  DPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQEDGP 124

Query: 158 TEIEIE 164
           TEIEIE
Sbjct: 125 TEIEIE 128

[Close]

BLAST of CcUC01G016650 vs. ExPASy TrEMBL
Match: A0A6J1KGM3 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495083 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 8.7e-42
Identity = 91/126 (72.22%), Postives = 100/126 (79.37%), Query Frame = 0


Query: 38  ITHGRSSSSLLFGYERSGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVE 97
           + H  S++ +L G    GK +  N HSI S  KPMR N LRLGCN STN I AF F P+E
Sbjct: 5   LLHSSSTACVLLG--GMGKFREGNRHSIFSPKKPMRANCLRLGCNNSTNAICAFLFTPLE 64

Query: 98  DPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVLEDGP 157
           DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKT ESAG+TEE+DTQ SV EDGP
Sbjct: 65  DPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQEDGP 124

Query: 158 TEIEIE 164
           TEIEIE
Sbjct: 125 TEIEIE 128

[Close]

BLAST of CcUC01G016650 vs. TAIR 10
Match: AT1G28150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 96 Blast hits to 96 proteins in 44 species: Archae - 0; Bacteria - 56; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 5.4e-20
Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 54  SGKVKAQNHHSILSSNKPMRGNYLRLGCNQSTNGISAFFFNPVEDPVIKEALKEPVAFAG 113
           SG V +Q HH   S+   ++ N L     + T    +  FN  ++P++ EALKEP+AF G
Sbjct: 13  SGVVVSQLHHHQFSAG--VKSNELWFRPTRRTLISKSSCFNLPQEPILSEALKEPIAFLG 72

Query: 114 GLFAGLLRLDLNEDPLKEWVKKTAESAGLTEEIDTQESVL---EDGPTEIEIE 164
           G+FAGLLRLDLNE+PLK+WV +T E++G+TEE    + V+   ED P +IEIE
Sbjct: 73  GMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGVVSNDEDSPQQIEIE 123

The following BLAST results are available for this feature:

BLAST of CcUC01G016650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893812.1	1.2e-48	80.95	UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]	[more]
XP_008439829.1	7.6e-48	80.16	PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo] >KAA0036065.1...	[more]
XP_004137400.1	1.0e-44	76.19	UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]	[more]
XP_022924196.1	7.3e-43	73.81	UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]	[more]
XP_023518976.1	3.6e-42	73.02	UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC01G016650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ89	7.7e-19	46.90	UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
P74786	5.7e-06	38.81	UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=11117...	[more]

BLAST of CcUC01G016650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGH6	3.7e-48	80.16	UPF0426 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G0068...	[more]
A0A1S3AZP7	3.7e-48	80.16	UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480...	[more]
A0A0A0LT92	4.9e-45	76.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1	[more]
A0A6J1E8W6	3.5e-43	73.81	UPF0426 protein At1g28150, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KGM3	8.7e-42	72.22	UPF0426 protein At1g28150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of CcUC01G016650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28150.1	5.4e-20	46.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040278	UPF0426 protein	PANTHER	PTHR35996	OSJNBA0038O10.25 PROTEIN	coord: 66..163
None	No IPR available	PANTHER	PTHR35996:SF1	OSJNBA0038O10.25 PROTEIN	coord: 66..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G016650.1	CcUC01G016650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0046910	pectinesterase inhibitor activity