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CcUC01G016390 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGAATTGAACATTACGTGTATTTGTTGTATTTTAAAGAAAAATCAACTTGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAAAAAAATGTGGGCAGCTTTCTCTTCTTCTACTCCGCGAAATCGGTCGAAAAGTTCCATCTCTGCCTAACGCAATTAGGGCACAAAAATCTTGCAGATTCTGATCTTCATTTTCGTAGTATCATCAATTACATGGTTGCATTGATTTTTGGCTGTTCGGCCCTATTTTTGCACTGGAAGATCATTCTTAGTCTCCACCATCTGCATTCCACCGGTTCTTTAAGTACTAGTTTTCTGTAAAGCCACTCACTTGCTCAGAATCCGATTACTCTTCGTGCACGATAATCGAAATTCGATTTGTTTGTTGCTGCCAATTTAGCAATTTATATTTCTTTCAGTTAATCGATTTGGTCTGGTTTTCGAGAATTTCTGGAATGGATCTGTTTTTCCTGTTTGCTGGGAGTATTTTTCTAGTATGATGATGTGGCTACTACGAACTCAATCTGCTCTTGCGGTAAGATTTATTTTTCAAATTTCTTCCATCCTTCCTTCGCTTTGTAGTTCTCATTGGCTGTTTTCTTTTCCTCCTACTTCCATTGTTTTTGTCTACTGCATTATATTATTCCATCTTTGCCCAGCAGTATCCTGGAGACGGCTAATATTCATCTCCATTCTAACTGTTCCCAGATGTTGTGCATGCTCTTTGTGGTGCAGGGAGTTAGGGCAGCTTAATTGAAGTCGACTTCTTCTTTTGGAAGTAGGAGAAGAAAAGGGATCTTATTATTATTTTTTCTTCTTTCCAATGACAATGTATCAAACAAGAAACATTGGACATCCTTTGATCAATCTTGTGAGGTTGAAAGGTTTTCCTATTCTGCAGCAACTACAATTGGAAGAGCGCCTACTTCGAAACTCATCTGATAATTGGTGTATCATAAATGATGGAACCGATAATCCAACTGTTGTGATGGGCGTTTCTGGGTACATACAATAATATGTAGTTATACTTCAAATTCTGCATGTCTTATGTCGCTATTTATTGGAAGACTTTATTTTTCTTTTTTCTCTGGATGATTTGAGTTTTATGGTGCTCATAATGATATAGTGACTATCGAACTTATATGTCACAGTTTGATGATCCGTAAATGCTATATTCAAATATCTGTACAAATACTTTTAATGAACCATTGAATCATGCTGTTAATAAACTGTCTTTATGAAATGATTGAATCTGTCACTACAAGTTGGAATGAGGTCTACAATTTGACTGAGTTTCATTGTACATTTTGGTGTTCCCTCTTTAATTCTTTTTGTCAATTCACCTCTTTATGGCTCACAAAAATTGGGTATTATTTTGTTGTAACTTTTCACCAAATCGTTGAAAAATTTGTTTCTATAAACAAAAAGCTCTCTTTATGAACTGTTGCTGGATGTAGAGGAGTAGCTCTTTCAATTCCTTCTGGCTGTATAGATCAGTTTAAGAGAAACCAATTGAACTTTTTTTACATGAAGTCTCCTTTTGATATGGATTAGTAACAACTTGATGATAGTAATAAGATCTGATTAGCAATTTGGATGGTTGTGTTAGTCTTGAGTAGTGGGTACTCCTAATTCAGGGCCATCTGATCTCTTCTTTTGTTTTTTCCTTTAGTTAATTCATTCTGAAGATTTTTGAATTCTGCACAGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGTTAGGGGATCAAATTCCGGTCATCAGAAGGTTCACAGGGGGTGGAACTGTTGTTGTTGATCACAACACAGTATTTGTCACCTTCATATGTAATAAAGATGCTGTTTCCGGACTAAAACCATTTCCTCAACCTATTATGTCCTGGAGTAGTCTATTATATAATAAAGTATTCCAAGGAACTGAGTTTCATCTTCGGGAAAATGGTAGGTAGATTGTGCAGTTTAGAAGAGACGCCAGTTCAACTTATTCATATAACTTCGTGTGCATTCAGTTATGTATAAGATTAAACGCTTGGGCATTGACCTTTTGTTTTTTTTTTAACTAAGATTATGTCTTTGGTAACCGCAAGTTTGGTGGCAATGCTCAGTCCATTACTAAAAGCCGATGGATCCACCATACATCTTTTCTGTGGGACTATGAGGTTAGGAATATGGCATATCTGAAACATCCAAAACGGGTTCCTGATTACCGTGAGGTATATTGTACTGTACTGTTCCTTGCATTTTTTTTCCCTTTCTTTTTAAACTGATTTCACATTTCATCCGCTTATTTTTCCATAACCAAGCCTTACTACTGCAATTCAAAATGCAAGTATATCTGACAGTTTCGAGACAATTAAATTATTCTTTTGATTCCTACTAATCATATTATCTTTCTGTTAGTTCATCCTAAATATTAAGCTATCGCCTTTGCTGTGATTAAGAAGTTCCTTGACAATTGCCATATCTCTGTCTAGTGTCTCCTAAGCTTGTCTTAACTATTAAGGCTGCAATTAGGAATATCTGTGTTGGGTTTAGTGAAAAACCTTTGGGGCCCAATCTAAATGTGGAGTTAGCATATTTTTCCAACCAAAATTAGACCTAATTTAGGTGATGCCCAGCCCAACCTGAACCATGTAATAGTTTGATTGGGATGGTTCAAATTGTTATGGCTGTATATTTTAAGATTGTGTAAAAGAATTGTGAAAATGATAGCATGAACGGCGGCTAATCAGCCAGTCACACATCGGCTGTGAATGGTCAGTAAGCTCACCTAGAGCAATGTTGTTTGACAGCCGTCGTGGTGGAGGTAGATCCTGTAGCTTCACTCCAAGGCTGTCAATGTAGATATCTTAAAAACCATGTTCGAACTCGAAATAGTGAAAATGATAGCATGTTTTCACACCTTGAACCTGAATTGAATGTAATATATAGTTCAACCTGCTATTTTAACTTACGCAAAACAACGGTAATATTCTTAAGACTTGAACCAATTATTTTTGACGAGTTGTAAAGAGAATAAAGAATATAATGGAGTTATTGGATTGCTACAATGAACCAGTCTATTGAGTAATAACTAATAATGACCATGGTAAATGGTAAAGTGTTTATAGAGAATGAGTTCAAATCGTGGAGACCACCTAAGGTTAGGTTATCATCTTGTGAGATTAATTGAGACGTGTGGAAGCTGGCTTGAACACACCTAAAAAATAGTTGTTGGTGCAACCTAAACTAATTATAGAGGCAACCTAGCTCCATGATCTAGAAATTCGAAGTCTTTCTACAATTTCTTAGAGATCTTTGAAGAAGTTTGTAACCTAACATGAGTTGTTTGGGTCCTTTGGACCATCATTCTTGTTACAACTTACAACAGGTTGGAGAAAGTGGAAGACTAAAACACATGTTGACATGCCATCTAGTCATAATATGATAAGTGACATGGTTAATGTTGTTATATCAGATGCAGCTTTAATTTGGTAAATGAATGTATGGATGGAGTAACAGAGTGTTCGATATTGACAGAGATTCTTTCTAATTCCTTATGTTGGTTTTCTGAAGTTTATTTGTACTAATTGCAAAACACAACATTTTATTTGCAACAAAATGCAAAATTAGAGCTTACTGGCAAACATTTATATGTTTCAGGCAAGGAGCCATTTGGAATTTTTATGCAGCTTGAAGGACTACATGCCAAGACAGGTATTTATTGACAAAACAATAGAAGCAATTGAAACTCAGTTTGCTACAAATTTAAAGCAATTAAAAGAATGTGAATATTCTTTGACTGCAAACTATAGTCCCACAACAAGGATGCTGACAGAGCAAGAATTGGAAACAGCTGCAGGTTGTGTATCTCAATATAATAAGCTTGACAAAGTCTTGGACATAGCATTATAACAAGTAATTTTGCTATATGATTATTTCACCCCAAATGATAAATTTGACATACCGCTCATCTATATTAATCTTGGAATCAATTCAA AATGAATTGAACATTACGTGTATTTGTTGTATTTTAAAGAAAAATCAACTTGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAAAAAAATGTGGGCAGCTTTCTCTTCTTCTACTCCGCGAAATCGGTCGAAAAGTTCCATCTCTGCCTAACGCAATTAGGGCACAAAAATCTTGCAGATTCTGATCTTCATTTTCGTAGTATCATCAATTACATGGTTGCATTGATTTTTGGCTGTTCGGCCCTATTTTTGCACTGGAAGATCATTCTTAGTCTCCACCATCTGCATTCCACCGGTTCTTTAATTAATCGATTTGGTCTGGTTTTCGAGAATTTCTGGAATGGATCTGTTTTTCCTGTTTGCTGGGAGTATTTTTCTAGTATGATGATGTGGCTACTACGAACTCAATCTGCTCTTGCGATGTTGTGCATGCTCTTTGTGGTGCAGGGAGTTAGGGCAGCTTAATTGAAGTCGACTTCTTCTTTTGGAAGTAGGAGAAGAAAAGGGATCTTATTATTATTTTTTCTTCTTTCCAATGACAATGTATCAAACAAGAAACATTGGACATCCTTTGATCAATCTTGTGAGGTTGAAAGGTTTTCCTATTCTGCAGCAACTACAATTGGAAGAGCGCCTACTTCGAAACTCATCTGATAATTGGTGTATCATAAATGATGGAACCGATAATCCAACTGTTGTGATGGGCGTTTCTGGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGTTAGGGGATCAAATTCCGGTCATCAGAAGGTTCACAGGGGGTGGAACTGTTGTTGTTGATCACAACACAGTATTTGTCACCTTCATATGTAATAAAGATGCTGTTTCCGGACTAAAACCATTTCCTCAACCTATTATGTCCTGGAGTAGTCTATTATATAATAAAGTATTCCAAGGAACTGAGTTTCATCTTCGGGAAAATGATTATGTCTTTGGTAACCGCAAGTTTGGTGGCAATGCTCAGTCCATTACTAAAAGCCGATGGATCCACCATACATCTTTTCTGTGGGACTATGAGGTTAGGAATATGGCATATCTGAAACATCCAAAACGGGTTCCTGATTACCGTGAGATCTTTGAAGAAGCAAGGAGCCATTTGGAATTTTTATGCAGCTTGAAGGACTACATGCCAAGACAGGTATTTATTGACAAAACAATAGAAGCAATTGAAACTCAGTTTGCTACAAATTTAAAGCAATTAAAAGAATGTGAATATTCTTTGACTGCAAACTATAGTCCCACAACAAGGATGCTGACAGAGCAAGAATTGGAAACAGCTGCAGGTTGTGTATCTCAATATAATAAGCTTGACAAAGTCTTGGACATAGCATTATAACAAGTAATTTTGCTATATGATTATTTCACCCCAAATGATAAATTTGACATACCGCTCATCTATATTAATCTTGGAATCAATTCAA ATGACAATGTATCAAACAAGAAACATTGGACATCCTTTGATCAATCTTGTGAGGTTGAAAGGTTTTCCTATTCTGCAGCAACTACAATTGGAAGAGCGCCTACTTCGAAACTCATCTGATAATTGGTGTATCATAAATGATGGAACCGATAATCCAACTGTTGTGATGGGCGTTTCTGGGAAACCTGATGAGCTCCTTGACATCAAATCTGTGTTAGGGGATCAAATTCCGGTCATCAGAAGGTTCACAGGGGGTGGAACTGTTGTTGTTGATCACAACACAGTATTTGTCACCTTCATATGTAATAAAGATGCTGTTTCCGGACTAAAACCATTTCCTCAACCTATTATGTCCTGGAGTAGTCTATTATATAATAAAGTATTCCAAGGAACTGAGTTTCATCTTCGGGAAAATGATTATGTCTTTGGTAACCGCAAGTTTGGTGGCAATGCTCAGTCCATTACTAAAAGCCGATGGATCCACCATACATCTTTTCTGTGGGACTATGAGGTTAGGAATATGGCATATCTGAAACATCCAAAACGGGTTCCTGATTACCGTGAGATCTTTGAAGAAGCAAGGAGCCATTTGGAATTTTTATGCAGCTTGAAGGACTACATGCCAAGACAGGTATTTATTGACAAAACAATAGAAGCAATTGAAACTCAGTTTGCTACAAATTTAAAGCAATTAAAAGAATGTGAATATTCTTTGACTGCAAACTATAGTCCCACAACAAGGATGCTGACAGAGCAAGAATTGGAAACAGCTGCAGGTTGTGTATCTCAATATAATAAGCTTGACAAAGTCTTGGACATAGCATTATAA MTMYQTRNIGHPLINLVRLKGFPILQQLQLEERLLRNSSDNWCIINDGTDNPTVVMGVSGKPDELLDIKSVLGDQIPVIRRFTGGGTVVVDHNTVFVTFICNKDAVSGLKPFPQPIMSWSSLLYNKVFQGTEFHLRENDYVFGNRKFGGNAQSITKSRWIHHTSFLWDYEVRNMAYLKHPKRVPDYREIFEEARSHLEFLCSLKDYMPRQVFIDKTIEAIETQFATNLKQLKECEYSLTANYSPTTRMLTEQELETAAGCVSQYNKLDKVLDIAL Homology
BLAST of CcUC01G016390 vs. NCBI nr
Match: KAA0036090.1 (lipoate-protein ligase LplJ [Cucumis melo var. makuwa] >TYJ98898.1 lipoate-protein ligase LplJ [Cucumis melo var. makuwa]) HSP 1 Score: 520.0 bits (1338), Expect = 1.2e-143 Identity = 251/275 (91.27%), Postives = 264/275 (96.00%), Query Frame = 0
BLAST of CcUC01G016390 vs. NCBI nr
Match: XP_008443042.1 (PREDICTED: lipoate-protein ligase LplJ [Cucumis melo] >XP_008443165.1 PREDICTED: lipoate-protein ligase LplJ [Cucumis melo]) HSP 1 Score: 520.0 bits (1338), Expect = 1.2e-143 Identity = 251/275 (91.27%), Postives = 264/275 (96.00%), Query Frame = 0
BLAST of CcUC01G016390 vs. NCBI nr
Match: XP_038895232.1 (lipoate-protein ligase LplJ isoform X1 [Benincasa hispida] >XP_038895233.1 lipoate-protein ligase LplJ isoform X1 [Benincasa hispida]) HSP 1 Score: 520.0 bits (1338), Expect = 1.2e-143 Identity = 253/275 (92.00%), Postives = 265/275 (96.36%), Query Frame = 0
BLAST of CcUC01G016390 vs. NCBI nr
Match: XP_022949490.1 (uncharacterized protein LOC111452820 [Cucurbita moschata] >XP_022949491.1 uncharacterized protein LOC111452820 [Cucurbita moschata]) HSP 1 Score: 516.9 bits (1330), Expect = 1.1e-142 Identity = 249/275 (90.55%), Postives = 263/275 (95.64%), Query Frame = 0
BLAST of CcUC01G016390 vs. NCBI nr
Match: KAG7037110.1 (lplJ, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 516.5 bits (1329), Expect = 1.4e-142 Identity = 248/275 (90.18%), Postives = 263/275 (95.64%), Query Frame = 0
BLAST of CcUC01G016390 vs. ExPASy Swiss-Prot
Match: O07608 (Lipoate-protein ligase LplJ OS=Bacillus subtilis (strain 168) OX=224308 GN=lplJ PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.5e-08 Identity = 48/171 (28.07%), Postives = 73/171 (42.69%), Query Frame = 0
BLAST of CcUC01G016390 vs. ExPASy Swiss-Prot
Match: O13629 (Putative lipoate-protein ligase A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=aim22 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.5e-06 Identity = 40/155 (25.81%), Postives = 80/155 (51.61%), Query Frame = 0
BLAST of CcUC01G016390 vs. ExPASy Swiss-Prot
Match: P47512 (Probable lipoate-protein ligase A OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) OX=243273 GN=lplA PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.3e-06 Identity = 41/157 (26.11%), Postives = 73/157 (46.50%), Query Frame = 0
BLAST of CcUC01G016390 vs. ExPASy Swiss-Prot
Match: A0A0H3JR16 (Lipoate--protein ligase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV1028 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.7e-05 Identity = 65/281 (23.13%), Postives = 111/281 (39.50%), Query Frame = 0
BLAST of CcUC01G016390 vs. ExPASy Swiss-Prot
Match: P0DN72 (Lipoate--protein ligase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) OX=160491 GN=lplA PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.4e-04 Identity = 35/107 (32.71%), Postives = 46/107 (42.99%), Query Frame = 0
BLAST of CcUC01G016390 vs. ExPASy TrEMBL
Match: A0A1S3B7D4 (lipoate-protein ligase LplJ OS=Cucumis melo OX=3656 GN=LOC103486730 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 6.0e-144 Identity = 251/275 (91.27%), Postives = 264/275 (96.00%), Query Frame = 0
BLAST of CcUC01G016390 vs. ExPASy TrEMBL
Match: A0A5A7SYE8 (Lipoate-protein ligase LplJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00950 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 6.0e-144 Identity = 251/275 (91.27%), Postives = 264/275 (96.00%), Query Frame = 0
BLAST of CcUC01G016390 vs. ExPASy TrEMBL
Match: A0A6J1GC58 (uncharacterized protein LOC111452820 OS=Cucurbita moschata OX=3662 GN=LOC111452820 PE=4 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 5.1e-143 Identity = 249/275 (90.55%), Postives = 263/275 (95.64%), Query Frame = 0
BLAST of CcUC01G016390 vs. ExPASy TrEMBL
Match: A0A0A0LSR7 (BPL/LPL catalytic domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033280 PE=4 SV=1) HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142 Identity = 248/275 (90.18%), Postives = 264/275 (96.00%), Query Frame = 0
BLAST of CcUC01G016390 vs. ExPASy TrEMBL
Match: A0A6J1K8Z4 (uncharacterized protein LOC111493356 OS=Cucurbita maxima OX=3661 GN=LOC111493356 PE=4 SV=1) HSP 1 Score: 507.3 bits (1305), Expect = 4.0e-140 Identity = 244/275 (88.73%), Postives = 259/275 (94.18%), Query Frame = 0
BLAST of CcUC01G016390 vs. TAIR 10
Match: AT3G29010.1 (Biotin/lipoate A/B protein ligase family ) HSP 1 Score: 321.2 bits (822), Expect = 7.9e-88 Identity = 150/258 (58.14%), Postives = 198/258 (76.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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