CcUC01G015900 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G015900
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	transcription factor TCP13-like
Location	CicolChr01: 28758696 .. 28771132 (-)
RNA-Seq Expression	CcUC01G015900
Synteny	CcUC01G015900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCTTCGTTATTTCGTCGGAAGAATTTTGGGTTGCTTCGCTCAGCTTCGCTGCCGTTCACCATGGCCAAAGCTTCGTCCTCCTTAATCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAGATCAGCCGTCCCGAGCGCCTTAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGGAGAAAGCCATTGTCCCTACCTCCAATCCCGAGACGGTCTTCGACATCAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTTCCCAAAGTTTATCTCACTGCCGCGATCGAGGAGGATATAAATGCTCGTGGAGGTGGTTATCAGAAGTAATAAGGTGAGTCCTTTTTTTGTTTTCCTTCAACGACCGGTTTCGTACTGTGGCGATCTTTCAGATTTAGGTTTTTGGTTAGAGAACCACTGGTTATTAGTCAGATACTAAAGGCATTTTAGGGAACGAAGTTGAATCTATGGATACCACATCCATTGAATTGCTGTTTTGTTCTTGGCCATAGTCTGGCTCATCTTTGCACAATTCAGCAATCTGCAGTTGTGTAAGTTGTGCGTTTGCAATTATGTACAAATCATCCTTTTTACTTCAAATGGCATAAGTTATGTACAGATCATTGTGAATACAGATGGTAGGAAAGCTGAATAACTTGCCCCTTTATGGATGGTAGGCGTGAGGGCATAGTCCAATTTCTGGTTCTTAATATAAGTAGAACCTTAACGAGCTAGGAAGTGCTTTTGGCCTTATGGCTTTTTGTTTTTGATCATTTAGGATTTGGCTTCCATTTGTTGGTTATTCTTTGAACATGTCATGATATACACAAATTAGATTGATTAAATTACTACTGTAGTTGTATGTTATGCGTTTCTTGAAGTGTTTAGGATAAGTGAAATCCACCACCGTTGCTGCTCAAATCAAATGTGTGTATCCACTTTCATCCCTAGCTATGGTTTCTGACTCTTGGACAATTTCTTTGTCTCATTTGCCACTCTTAGAGATTTAACTATAAACTAGGTCTAGGCTGTATGTGCTACCAATACAAGGTATAAGGTACATGGGAAGAATTACTACTTTGTTTTTTGGTTCTCTACTGGACAAGGTATAAGTAATTCCTTTTCACAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAGAGAGAGAGAGAGAGAGATGGAGATAGAAGAAAAAGTGGAAAATTCAGATTGGAGAAGTAGTAGCCTTTCTTAATTAATTTGGATAATCGCAACTCACAAGTTAAGTTATAGAATTTCTGTGTAGATGCACTGTTTCCTGTTCTGTGTAGAAATTTGTATATTTATTGCCAGGCAGGCTCTGTGATATTCAGCGATGGCTGCATATTAGTTTCACTGCTATTAAATGCTTACATTGTCCCCATTCATTTTATTGGATAGCATTCAGCTTCGATCATTCTTATCGTGTCAAATATTAATTTTGGGGGTGGGAGGAATAGGCAGAAGGGAACAAGTGGTTCTCACAAGATACGATGGCTGTACTCCCTCGAACAACCAAGGGGGAAGGGGTTTGGTCAATTTGAAGATTTTTAATCCAAAACAACTTTGAATTTTAGAATTTTCCTTCAGAAGAATAAAATGAGATACTAGCCTTCTTAAAAATGTATGCTCGTCTTCATCACCTGGTTGCTTGCTTGTGGTAGTGAAATTTCATGGAGGAGGTGGCTGAGGCATGTAAGATGGGTTTGTTTTAGATACTTCAAATTTGCATTCTCTTGTTCTTTGCTACGCTTAGGTTCTCTGTAAATCTGTTCGTTCATGTAAATATGTATTGCATTTCTTTTTGATGGTGGGGAATGATTTTTCTTTTCTCATCTTAGTTTTAAGTATCTTTAAATGCGGATTAGCACATATAAGCTTCAGGTACAGAAAATGACACTTCTTGTTTTTGAAGGACAACCTAATATCAATATTGTATTTCATTAAGAACATGAACGGTGATCATGTGAATTAATTTTATGATTAAAATGAATTTTATTTAGTAATGCTATTTCTTGCAACGATAGTAAGTGCAAGATTTCTGACATAATTAAGTTGTCCTTTCATCAGGTTTGGTGGGTTCTTTAAAAATTTTCATGACCTGCTTTTGCTGCATTATAGATCCTTTCCTTTTGTTACCCTGTCTTTTGTGCGATTTTTGTTGCTGCTATTCTGTAGCATCGTAATTCCTAGAGTTGTCCTAGTTAATAATTGTCAACATTGGTTGCAAATTCCTGTAAATGACCATTAACTTTGTAATTTTTACCAGGTTCTTTGTGCTCTGGGAAATGTTCTCTCCAGCTTGTATTCTTCAACTCTGCTTCTCTTTCAATGTTAACCTGAGAGTTTGGTTATTTAGGTATAGTAGTTTGTACGCCTAGCCTATACATTAATACAATACTTGGGATTTGGCATCAATAAAGTAATCTCCTCAAACTCCTACTCAATTTTTTTTGTTTCTTTTTTAATGTTATGTGATTGTATTTCAACCACGTTGCATTTTCCATTGCTCCTGAATTTTAGAACATTTTGCTTGCATATATCATTATTGTTTTATCCTGAGCTTTGTTTTGACTGCAACAATAACAAAGCTGGGATCTCAATCCCATGGACCTATAAATAAAGAACTGAAATTTCCCTTGTCTTCAAGTTTTCTTTCCACTATGGTTTAGACGATGATTTTTCATTTGCAATCTGGGGTCACTTGTACAGTCTCTTCTGGCTGCAATTTTTTTTGACCTAAGAAATTTTTATCTGGCTAGTTGTATTCTTTGGCGGATGGAGCAGCTCGTTCATTTGGAACGTCTTTTGACAAATGTTTGATAACCATCTGCCCCGTCATTCTGTTTTGTTTTTAGCTTTGAAAATCATGCTCATTTCTTAAAACAAAAAACAATAATATATATATATATATATATATATATATATATAAAATTTTTTTTTTGTGGTTTTCATCTTTCTTAGAGTAAACCCTCAAATTCCAAAAACATTACTTTTTATTTTATTTTATTTTAATGGGGTCACTATGTGGAAAAAGTAGTGTTTATAAGCCTAATTTTCAAAAATGAAAAAACAAAAGTTATGGACTAAAAATTTAAATGTTTCTTTAAAAAGAAAATGAAAAGAAAGCATAATTTTTGGAATAGAAAAGTGAAAATGAAATACCTTAATAAGCCTATGTCAATATAGTTGGTCCTTCATCTGTCCACAAAGCATCTCCATTACCACACAATTCACCTTTGAAACAAAGCCATATCTTCCAATGAAGTTTCTCTCCTCAAATTACTCTAAATTTTCCTCCCCTATTTTTCCTTCCATATTAAGGCTCTACTCTACACTTCTCTAGGTAACCCTAATTAACAAAGCTTTTAATACTCTTGTTGACTTTTAGCCATCATATCAATGCAAGAAAATAAATACCCATTGAGAATATGATGTATAGTTCTCAATATTAAACAATCTTCTTTCTCAATTCTCCCTTTTCCATTTGCCATCGTAAAATCCCTCACTTTGCTACAAAAATATGTTCTTTCTCTCTTCTCTGATATGGGATTGTTGAAATCTTGAAACCCATTTGATTCAAAGAAAAAGAGAGCATACATATATCATATTTTTGGATCAATCTATAAGCTCTGTTTTGAAGAAACTACAAGAAAGAGTAAACAATATGATCTCAAAATTGAAGGAAGAGGGTGTTCATGATGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGCATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCTTTGTTTGGAGGAAAAGATAGGCACAGCAAAGTTTGTACAATAAAAGGCTTAAGAGACAGAAGGATTAGGCTTTCAGTTCCAACTGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTCTTAGCCAACCCAGCAAAGTCATAGATTGGCTTATTGATGTCACAAGATTTGAAATCGATAAGCTCCCGCCACTCCATTTTCCAAAAGATTTTGACCCAAATGCCTCAATTCTTCATCATTCTTCACTGCTTTTTCCTCAGATTCCTCATTTTGATATTGCAGATGCTGCAGTGAAGGCCAAAAATGAAGAAACTGATCACAGGCTTTTGCTTCATAAGTTGTCTTCTTTATCTGCTCTTCAAGTTCAAACCAATGCCATTAATGGAAACTGTTGCCATTTTGAACCTCCAAGCTTTCCATTCCCATTAATGGATCAGATCAATCCAGTTTCATTTTCCTTCTGTCCCTTGACGATGCCGTCTGAAGTTTCTTCTTATCTTCCCAACGGTAGAAATTAAAGGTGTGTTTGAGATGACTTTAGAATGATATGTTGAATTACAAGTTTAGTCTCTTAACTTTGAAATTGTATCTATCTCATTTTTGAGCTTTTAAAAGTGTCTAATTTGTCATTGAACTTTCAAATTTTTTGTGTCTAATCGGTCTTGGTACATCCAAAATTTCTAAAAATTAATTTATTTGTTACATATAAACTTACATTTTATGTTTTATGAAACTCTAAACTTTCAATTTTATGTCTAGTTGATTCATGAATTTTAAAAGATACCAAAATATGACAAAAACTTATTTAACAAAAAAGTTAGAAATCAATTAGACACAAAATCAGAAATCGAGGGACCAAATAGACATAAACTTAAACGAAGAGGAATTAAAGTTGTAATTTAACTTAAAATCTAATTTTACCCCCTCAAATAATTTTCAAGTTCAAATCTTCATTGTTTCATTTTTAGCTGCAATCTTGTGATTAGTTTTCTTCTCCATTAAAACCTGGTCTAAAGTTTCTTCATTGACATGAAATTTAAAGACCAAATATGAAAATGACAGATTATATTTCTCTCCATGGTGCAGCTTTTCACTATATTTTTGTGGTTTTCTACTTTTCTAATAAGAAGTTGCTTGTGAATATGTGTATATATATAATTGTAATAATACTTTATAAAAATATTATTTTCAAATATAAGAAAATGAGTCAAAATGTTTACAAATATAGAAAAATTTAACTGTTTATTAGCGATAGTCCGCAATAGACTTTTATCACCGAGCAATAGACCGCGAAAGACTTATGTTGTCTATCACTGATAGATTTTTCCATTTATAATAATTTTATTTATAAAAGTAGCCTATAACGTGTTCATAATACTTTCTCATTAATATTATAACGTTACATTTATCAAAAGAACAGTAGATGTGTCGTTAATTTAACCACACAAAAATTGCTTTACAACTACCATAAAGAATAGTTATATTAATTTTATAATACAACATTATATTATATTTCCCATTTTCCACCAGGTCAATAGGCCAAGGTAAGCTCAAAAAATATTTTTGTTTATTTATTTTACAATTTGTAAAAGAAATATAAAAGGGATTATGGGCTTAGTGTTATCATTATAAGGCCAAGGAATTAGAAAATAAGGAGTAAATATAACCCCAAAAAAATAGTATAAAAGAAGCAGCCCCCGGCGAGGATCGAACTCGCGACCTTTCGCTTACGAAGCGAACGCACTACCACTATGCTACGGAGGCAATGCTGATAGAAAAACTGACTTTATTTTTTAATATTTTTAATTTAGGTCGTTCCATTTTAATTTTTATAGTTTTAAATATTCACCTTTAGTTCATAGGCTTTCAACGGCCTTAAAATTTAATAAAAAATATGCATGCTGGATGGAATGGTTGTTACTAATCTAGTCGTTGGAAGTTATTTTTTTAAAAAAATTGGTTCAATAATAATAATAATAATAATAAAATACTGTGAATATGTTCCCCAAATTTATAGTGGGAGATTAATAGGTAATTTTTAAAAAAAAAAAAAATAAACAAAACTAACACAAATGAACTAAATTTAATGATGATTGCATGGACTAAAATAGTTTTAAAGTAGACCAAAATAGTATTCTAACCTATATAATCTAGTTTGTATTTTCAACATTCTTCACTGTTCAATGTTGTTAAAAATCAACTAATCATTAACTTACTGAATTAACGAAAATTTAGAGAAGAAAAAAAGTCATATGAAAGAAAAAAAATGTTAGAGTAGAAACGTTTTTCTCTTAGATGACATTTTTCCTCCTCTAAATTTCTTTTAATTTTATGCTATAAAAGTTTAGCATAAGTCAATTGTAACATTCAACCACGAGACTAAATTCAAATTTATTAAACAATAGAGACTAAAAGTGAGAAAACACACAAATAATTGGAATAAGACAGTCCTTTCATTGGTAAAATATGAAAACTTCTCACTTTAGATAGATAAGCTGAAAAAAGTTCTTTGATTGTTTCAATCAAGTTCAGAAATGATCACATAAACTTCTTTTGTGGTTATAAGCAAAACCAATTTTTGGAATCATTCACCATTTTCTCCTCAGTGTTCATGGCCATAGAAAATATGAGATGTTTTAGACAATCAGATAATTGGGTAAGAAACAAAGGAAGCAGAAGGGAGAGGTGAAGAAAGAATATCAGGTGCATACATATATTGATTCATAACAAGACTATGTTCATGGTTTGAAAACTTGTAAACCATCTTTACAACACTTCTTAATGATTAGTCATAATGCTTCTGAGCATTATATATATTATAGGAAAAAAAATGAAAGTTCCATCGCTATGAAAGGGTAAAATCAGAGAGGTGAAGGTTAAAAGAAGAAACTATCAAATAAACAGCTGTCTTCGTCTGCCTGACTTGGCGCGTAAATGAGCAGCCTCGACGTATACAATTTCGTCAACTAAGTCTTTGAAGATCAATCTTTCAATGTCCAAGACAACGTTGGAGATGTCGCCATAGAAATCAGTCCAACTTTCAGATCTTTGCATCATGTCTTCCTTTAAGATACTATCCAAACTATCGTCCTCGTCGGGTTTCTTCGTTTGAAGCTGTTCTATTTCGGAACATAGCTCCTTCAGAAGCTTTTGAGCACTAAGAGTTTTAGTTGCTAGTTTTTTGGATGTTGTCCAAGGCTCTGGTGATGCAGCAACAACTGACAACTCTCTAGCAAGAATCTCATTAACAGCATCAAAAACAAGTTTGCGATGAGATTTCTCCTGGTTCAGTTTTGAATCTGTAACTTTCAGAGAGCTGCAGTCATCCTTTCTTAGCAAACTGCTCGTCTTGGTTTGCTCCAAAACGAAGAATAACTCAGGGTTGATTGGATGACCGGATGGATGGAGTTGAAATGTTGCCAAGCCTGAGCCGAGGTCCCGGAGTAAGAGGCCAGAAGCTAACAATATTTCAGATATGTATCTGTTATCTGGATCAGTATTCTCACATAATGATGCAATGTAATCTGTTTTTGCTTCATCATAGTGAGAGTTCAGGCGCCTGAGCTTCTGAACCAAGTTGTCAATGTTTTGCAGTTTCTTGCGGTTGATTTCCGTGCTAAGACTGGGCTCCCCAATGTTATCTGCAGCACTCCATTGGTATTCACCACAATCTCCAGAGCCTAAAGTCCTATTGCCTGAAAAGTAAGCATCAAACAGTATTAGAATTGATTAAATCGAAAACAACGTTAAATTGAACTTCTTATCTCTATAAGAATGAAACTGAGAAGATGTGCTTTAATTTCTATGCACAGGAGCACAGAAAAATGAATGAACTTATCAATTAATACACAACCATCAAATATCTCCGGCCTACAAACTAAATCTGAGATATATCATGATTGATCATCAATAATTGCTTCCCATCCCCTCTCTGTTAAAATCTGTCATCTTCATGTTCCACTCTTGAAAACAAGGGATGGTGGTACTACAACGACTAAATTGCAAAATATTCCAATTGATTCAGAAAGGATTGTAGCTTTTGGTGACACATTTGTTCACCTTTGAGGGCTTTTGATATCTGCTTAACAGGAGATGGAGATGGTTCGTCGTCCCTATATATAGAAGCATCAAGAATGGAGACCGGACTAGGGTGCTCAGGAGCAGGAGTAGCAAGTTCTGCCTGCAAGCCACAAAATGAAAACCTCAGATTTGAGTTCTGAAACAATCTAATAGATACGTAGATTAGTTGCTGTAAATGCAGAGGGAAATAAAAAGTCACCTACATTTTCCAATGAACGAGAATCTGAGTACTTTGAAGTCTTCATTTGTAAACTATGGTTGCCATTAATGTCAGCAGGAAGTTCACTGCTGGTGACTTCAATATCTGTCTTTGAGTCCAAGGATAAATTACTGTCAGACAGTTGAGATATGTCATCCCCCTGGTTACTCAAAGTTCTTGATTCATTGCTTATTTCACTCAATTGGTCTTCCATTTGCGAGACATGGGAAGGTTTCACTCTCAGTTTTCCGACAGAAGAACCAGAATCAGTTCCTTGTCTGTTGGATTTACATCTGGTTTTGTTTGTGTCAGATGGAGGAGTTGGTGGTCGAGATCGTTTGTCCTGCTCAGCCTTCTTCTGTTGCAGTCTAGGGCTCACAGAACCTGTGGTTTTCATTGAACTTAAGGTGTTTTCCTTAGGTAAATGTTGAGGCTTTGAAGAAGTATGCGTTGGCCTTACATTTCTTGCATTATCTTTCTTTTTGGTGGAATTTGCACCAGAGTCCCTGTGACTATTTTCAGGTGATGTATCTTTAACTGCTCGGCTACCACTAGGGTTCTTTTTACCATGTGGGGCTTTCTGAAGCTTTGGGAGACCAGGAAGGCTGTCGATTTGAATAACTGATGAAGCTGGAATTCCAGATTTCTCTACAAGTTTTGCTGGTTTCATGATCACAATTGGAGATTCCCCACATCTAGAAGAATCATGCCTGCTAGTTGTTGCAGCCTTTTGGTTTTTTTTCCAACTTTGTTCACTGGTCAACCTAGAATTAACACTAGAGCTCTCCCGTTTCGGTTCATTGTCTCTTTGAGTTGCACTGTTGGAATGCTCCTCCTCCTTCCTAGTATCCAAGAACCCCTTTGATTGCATAGCATCAAGGATCTGTTTAAGTGCTCTAAGATCTTTCCCTGATTGTTTAAATTCCAAGTCTTCCAATCGTTTTTCAATTTCACTATAAACAGAAGGAAAGGGGTTAGATGATCCAGCTAACCCTTTTGAATGCTTCAGAGCAGATTTATCAAAAGCTCGAGTTCCATCTGGCTGCCTCCATGGCGCAACTTCTATAGGAAACTTCGAATTTGGTATAGGTTTCATAACTAAATCAGGATTCTTCCATCGTGGTGAAGTTGGGCCTTTCAACGTGTTCCGAGGAGAGTCAGTTCTAATTGGCCTGATAAAGCTTGTGCCATCCAGTGAGTTAACAAAGGGGTCGCCTTTAACCTGAGTATCACTAGCCAAGGGTGAACCTGGAAGTGCTTCCAATCCCATTAACTTTGCCACAACACTAGGGGGTTGCTTCCGAGATCCTGATGGTCGTGGTGGATCAGAAGTTTTTTCATTAGAGCAATCGCTACTGTGCAAGTTCTTTAAATGTCTAGTTGTATTTGAACTCTCCTTGCTGTCCAATGAGAGCCTTGGAAAGTCTTTAAATTTTGGAGCTGACCGAATGGTATCTCGTGATTCAAAGGATAATCGATCAACCTCTCTCCCATCATAAGAAAACCGAGGAGCATCTCTAGAGAATGATTGCAACAATCCGTCTCTTACTTCGTGAGACGGTCGTTCGTGTTCTACGACTTCATTATAATACCATGGTGCATCTCGAAGTTTAGCAAGAACCAGAAGAGACTCCTTTAAATCAACAGGCATCTTCGGTTTCCAATTTGTATCAACCTTTGAAGGCCCATCTGCGGATTGGGATAACTGTACAGGCCTTGGAGAGTCTCTATGCTTCATAGAACGACTCAGTGGTTCCTCATTAGTAGATGTTTTGACTGATAACGTTCTGGCTTCCCTATACATAGAATCCTTCACAACATCTCGAAGATCAAGGTGTTGCCTTCCAAAACGAGGAGAGGTATTTGACTGGTTTGCTACAGAATCCCTTGACGGTGTTCTTGATAAAAGTATCTGATCGAATGAGGAAGATTGTGATGGAGCTGTTTTGTTGTACTCACTAGAGGATAAGGAAGATGAGCAAGAAGAGAAAGAAGCTCTCGATAATTCTTTACTAAACCTTTGTTTCTCATTGAAACTCTCATTTGGGGATATGTCCTGCAAGAACAAGATTTCCTAGCGTAAGATGCAGGGAGAACTCAAAATTTCTGTACATAACTTAAATGCTTAAGCATAATTACAGTTTTGTTAACTACTCGGCTTAAAAAATGGCAAAGAGTAATTAGGAGACTTACAGCTGCCTCTCTTTGAAAGACATTGTACTCTTTTCCTGCGTTGCCAATATTTAGATGAGAAGTGCCTGTAGTAGACAAGATTGAAAATAATTTGGCATGTTATCAATTTGCATACCACTGGATTTGAATATATATATATACAAGAAACCAAGCTTTCATTGAGAAAGATGAAAGGATATACAATAGCATACAATAAAACAAGTCCATCAACAAAGAAATCTCCTCAACGGAATCCTATCCAGAAGAATGATGCCATGTTGATAATTATAGAAAGTCCGATTCACAAACACCCACAAAGAGGCAGAACTTTCCACCCTTCCAAAGATTATATATTTCTCTCAAGCCAGACGCCCCACAAAATGGCAGAAAAACAAGACTGCCGAAGGATTTATAAACAATAACCAATTAAAGGATTGTGAAACTCCTTTAGAGTGATCAAACAGAAGTAATCTATCCGAAGTTCAATAATATAAGCTCAAGGGATCAAAATTAGATTAGCCACATAATTATGAAGAGCATGGTGTATTTTCTTTTTTGCTCCACAGAACACCAATTACAGAGATATTCAATAAACAGTGTAGTTAACAAATTAGGCAACAGAAGAGAGCCAAAAAGAAACACAAACTTCAACTCTGTTCCTCTATCCCCATAACAAAAAGGAAAATGAAAACAAACCATCTCAAGATATATATAGAGAAAAAAAAAAAGTGGCATCTTCAATTCTTAGAAGAAGTATGAACTTAAACAAGATGCATCAAAGTGATCAAAATATCAAAAACTAGTCGGCAGCTTGAAAATTTTGTGGCAGAAAGACAATAAGCCAAAGCAAAGTCCGATAGCAAAATACCAGGAGGAAGCCGCTTGTGCCTCATATGTCTTCCACTGAGTACATGCTGACGATCAAACAACTGCAAGATCCCAGTCATGCATCCTATTTGCTTCTGTAGATCTGGATTTTCATCAGCTAAAGAATGTAGAAGCTTTGCAGCCATCTTCAGGTTCTTCTCTTTCACAATAAACTATGTACCTTTCCTCAGCTCAGTCATAGAAAGAACCACATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCAAATCTNAAGATCCCAGTCATGCATCCTATTTGCTTCTGTAGATCTGGATTTTCATCAGCTAAAGAATGTAGAAGCTTTGCAGCCATCTTCAGGTTCTTCTCTTTCACAATAAACTATGTACCTTTCCTCAGCTCAGTCATAGAAAGAACCACATACCAAAAAAAAAAAAAAAGAAAAAGAAAAGAAAAAAGAAAACCCAAATCTTAGGCTATTCCAATAATCTAATGACTAGTGCAATGGATATTCTAACCAGTTATCCTTCGGCCCCAAAAGAACCCCACCTCAAAGACCCTTCTTATTAGAAGAAAGACAAGCACCTTTCTTCAAAAGGAATCAATTCTCTTATTCTCCATAATCCACAGAGTTCTATATGGTCCAAAAACCAAAAGATAAGGATAAAGAATTTCCAAAGCCCATGCCCTTTGAATTACAGCATCTCCTAATAGATTGTTGGGTTATATGTACAAGACCCAATTGCAGCTTCAGAAACAGTGCAATTAACAGCTTGAGATCACTTCACAATGTAAAATCCCAACCCCACAATTTCCACCCAAATCCCAACCCCACAATTTCCACCCAAATCCCAAAATGCCCTTCTGGGTTCCTTACCAATTTCCCAAATCTTGATTCCTTGCAGCAACAAAGAAGAATCCACGAAGAGAAGGAGCTAATGGGTCAGGGTCAACGACGAATGGCGAGGGCAGAAACAGAAACAGAGAGC

mRNA sequence

CGCTTCGTTATTTCGTCGGAAGAATTTTGGGTTGCTTCGCTCAGCTTCGCTGCCGTTCACCATGGCCAAAGCTTCGTCCTCCTTAATCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAGATCAGCCGTCCCGAGCGCCTTAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGGAGAAAGCCATTGTCCCTACCTCCAATCCCGAGACGGTCTTCGACATCAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTTCCCAAAGTTTATCTCACTGCCGCGATCGAGGAGGATATAAATGCTCGTGGAGGTGGTTATCAGAAGTTCTTTGTGCTCTGGGAAATGTTCTCTCCAGCTTGTATTCTTCAACTCTGCTTCTCTTTCAATGAAGAGGGTGTTCATGATGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGCATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCTTTGTTTGGAGGAAAAGATAGGCACAGCAAAGTTTGTACAATAAAAGGCTTAAGAGACAGAAGGATTAGGCTTTCAGTTCCAACTGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTCTTAGCCAACCCAGCAAAGTCATAGATTGGCTTATTGATGTCACAAGATTTGAAATCGATAAGCTCCCGCCACTCCATTTTCCAAAAGATTTTGACCCAAATGCCTCAATTCTTCATCATTCTTCACTGCTTTTTCCTCAGATTCCTCATTTTGATATTGCAGATGCTGCAGTGAAGGCCAAAAATGAAGAAACTGATCACAGGCTTTTGCTTCATAAGTTGTCTTCTTTATCTGCTCTTCAAGTTCAAACCAATGCCATTAATGGAAACTGTTGCCATTTTGAACCTCCAAGCTTTCCATTCCCATTAATGGATCAGATCAATCCAGTTTCATTTTCCTTCTGTCCCTTGACGATGCCGTCTGAAGCGCCTGAGCTTCTGAACCAAGTTGTCAATGTTTTGCAGTTTCTTGCGGTTGATTTCCGTGCTAAGACTGGGCTCCCCAATGTTATCTGCAGCACTCCATTGATGGAGGAGTTGGTGGTCGAGATCCAACAAAGAAGAATCCACGAAGAGAAGGAGCTAATGGGTCAGGGTCAACGACGAATGGCGAGGGCAGAAACAGAAACAGAGAGC

Coding sequence (CDS)

ATGGCCAAAGCTTCGTCCTCCTTAATCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAGATCAGCCGTCCCGAGCGCCTTAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGGAGAAAGCCATTGTCCCTACCTCCAATCCCGAGACGGTCTTCGACATCAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTTCCCAAAGTTTATCTCACTGCCGCGATCGAGGAGGATATAAATGCTCGTGGAGGTGGTTATCAGAAGTTCTTTGTGCTCTGGGAAATGTTCTCTCCAGCTTGTATTCTTCAACTCTGCTTCTCTTTCAATGAAGAGGGTGTTCATGATGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGCATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCTTTGTTTGGAGGAAAAGATAGGCACAGCAAAGTTTGTACAATAAAAGGCTTAAGAGACAGAAGGATTAGGCTTTCAGTTCCAACTGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTCTTAGCCAACCCAGCAAAGTCATAGATTGGCTTATTGATGTCACAAGATTTGAAATCGATAAGCTCCCGCCACTCCATTTTCCAAAAGATTTTGACCCAAATGCCTCAATTCTTCATCATTCTTCACTGCTTTTTCCTCAGATTCCTCATTTTGATATTGCAGATGCTGCAGTGAAGGCCAAAAATGAAGAAACTGATCACAGGCTTTTGCTTCATAAGTTGTCTTCTTTATCTGCTCTTCAAGTTCAAACCAATGCCATTAATGGAAACTGTTGCCATTTTGAACCTCCAAGCTTTCCATTCCCATTAATGGATCAGATCAATCCAGTTTCATTTTCCTTCTGTCCCTTGACGATGCCGTCTGAAGCGCCTGAGCTTCTGAACCAAGTTGTCAATGTTTTGCAGTTTCTTGCGGTTGATTTCCGTGCTAAGACTGGGCTCCCCAATGTTATCTGCAGCACTCCATTGATGGAGGAGTTGGTGGTCGAGATCCAACAAAGAAGAATCCACGAAGAGAAGGAGCTAATGGGTCAGGGTCAACGACGAATGGCGAGGGCAGAAACAGAAACAGAGAGC

Protein sequence

MAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINARGGGYQKFFVLWEMFSPACILQLCFSFNEEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSFCPLTMPSEAPELLNQVVNVLQFLAVDFRAKTGLPNVICSTPLMEELVVEIQQRRIHEEKELMGQGQRRMARAETETES

Homology

[Close]

BLAST of CcUC01G015900 vs. NCBI nr
Match: KAG7019990.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 525.0 bits (1351), Expect = 5.8e-145
Identity = 275/364 (75.55%), Postives = 290/364 (79.67%), Query Frame = 0


Query: 1   MAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNP 60
           MAKASSS  QTLKRYIKKPWEITGPCADPEY+ AVPSA+EYRVFCPATTKEKAIVPTSNP
Sbjct: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120

Query: 121 GGGYQKFFVLWEMFSPACILQLCFSFNEEGVHDEAKQMEGKRKKA------FLRGNPRIF 180
           GG         EM     +  +     +EGVH EAKQMEGKRKK       FLRGNPRIF
Sbjct: 121 GG---------EM--TGRVNNMISKLKQEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIF 180

Query: 181 RVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTR 240
           RVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLS+PSKVIDWLIDVTR
Sbjct: 181 RVSPLFGGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSRPSKVIDWLIDVTR 240

Query: 241 FEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS- 300
           F+IDKLPPLHFPKDFDPNAS LH          H DI+DAA KAK+EET   LLL KLS 
Sbjct: 241 FDIDKLPPLHFPKDFDPNASFLH----------HLDISDAAAKAKHEETG-MLLLQKLSP 300

Query: 301 -----SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS-------FCPLTMPSEA 346
                S SALQ++TNA+  NCCHF+PPSFPFPLMDQ NP SFS       F PLTMP E 
Sbjct: 301 SPNHASFSALQLRTNAMTENCCHFDPPSFPFPLMDQANPASFSSPSEQLLFRPLTMPPEV 342

[Close]

BLAST of CcUC01G015900 vs. NCBI nr
Match: XP_038895251.1 (transcription factor PCF6 [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 1.3e-99
Identity = 179/193 (92.75%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 148 EEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTA 207
           +EGVHDEAKQMEGKRKKAFLRGNPRI RVS LFGGKDRHSKVCT+KGLRDRRIRLSVPTA
Sbjct: 7   KEGVHDEAKQMEGKRKKAFLRGNPRILRVSSLFGGKDRHSKVCTVKGLRDRRIRLSVPTA 66

Query: 208 IQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIP 267
           IQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSL  PQIP
Sbjct: 67  IQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLFLPQIP 126

Query: 268 HFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINP 327
           HFDIADAAV AKNEETD RLLLHKLSSLSALQVQTNAI  NCCHF+PPSFPFPLMDQ +P
Sbjct: 127 HFDIADAAVTAKNEETDQRLLLHKLSSLSALQVQTNAIKENCCHFQPPSFPFPLMDQTSP 186

Query: 328 VSFSFCPLTMPSE 341
            SFSFCPLTMPSE
Sbjct: 187 ASFSFCPLTMPSE 199

[Close]

BLAST of CcUC01G015900 vs. NCBI nr
Match: XP_023001048.1 (transcription factor TCP13-like [Cucurbita maxima])

HSP 1 Score: 298.9 bits (764), Expect = 6.7e-77
Identity = 158/217 (72.81%), Postives = 167/217 (76.96%), Query Frame = 0


Query: 148 EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIR 207
           +EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIR
Sbjct: 14  QEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIR 73

Query: 208 LSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSL 267
           LS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLPPLHFPKDFDPNAS LH    
Sbjct: 74  LSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNASFLH---- 133

Query: 268 LFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPP 327
                 HFDIADAA KAK+EET   LLL K S      S SALQ+QTNA+  NCCHF+PP
Sbjct: 134 ------HFDIADAAAKAKHEETG-MLLLQKSSPSPNHASFSALQLQTNAMTENCCHFDPP 193

Query: 328 SFPFPLMDQINPVSFS-------FCPLTMPSEAPELL 346
           SFPFPLMDQ NP SFS       F PLTMP E    L
Sbjct: 194 SFPFPLMDQANPASFSSPSEQLLFRPLTMPPEVSSYL 219

[Close]

BLAST of CcUC01G015900 vs. NCBI nr
Match: KAG6584403.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.4 bits (760), Expect = 2.0e-76
Identity = 157/217 (72.35%), Postives = 167/217 (76.96%), Query Frame = 0


Query: 148 EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIR 207
           +EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIR
Sbjct: 14  QEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIR 73

Query: 208 LSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSL 267
           LS PTAIQLYDLQN+LGLSQPSKVIDWLIDVTRF+IDKLPPLHFPKDFDPNAS LH    
Sbjct: 74  LSAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRFDIDKLPPLHFPKDFDPNASFLH---- 133

Query: 268 LFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPP 327
                 H DI+DAA KAK+EET   LLL KLS      S SALQ++TNA+  NCCHF+PP
Sbjct: 134 ------HLDISDAAAKAKHEETG-MLLLQKLSPSPNHASFSALQLRTNAMTENCCHFDPP 193

Query: 328 SFPFPLMDQINPVSFS-------FCPLTMPSEAPELL 346
           SFPFPLMDQ NP SFS       F PLTMP E    L
Sbjct: 194 SFPFPLMDQANPASFSSPSEQLLFRPLTMPPEVSSYL 219

[Close]

BLAST of CcUC01G015900 vs. NCBI nr
Match: XP_023519980.1 (transcription factor TCP13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.2 bits (757), Expect = 4.3e-76
Identity = 156/217 (71.89%), Postives = 166/217 (76.50%), Query Frame = 0


Query: 148 EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIR 207
           +EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIR
Sbjct: 14  QEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIR 73

Query: 208 LSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSL 267
           LS PTAIQLYDLQN+LGLSQPSKVIDWLIDVTRF+IDKLPPLHFPKDFDPNAS LH    
Sbjct: 74  LSAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRFDIDKLPPLHFPKDFDPNASFLH---- 133

Query: 268 LFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPP 327
                 H DIADA  KAK+EET   LLL KLS      S SALQ+QTNA+  NCCHF+PP
Sbjct: 134 ------HLDIADATAKAKHEETG-MLLLQKLSPSPNHASFSALQLQTNAMTENCCHFDPP 193

Query: 328 SFPFPLMDQINPVSFS-------FCPLTMPSEAPELL 346
           SFPFPLMDQ NP SFS       F P+T+P E    L
Sbjct: 194 SFPFPLMDQANPASFSSPSEQLLFRPMTVPPEVSSYL 219

[Close]

BLAST of CcUC01G015900 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.4e-31
Identity = 62/81 (76.54%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 170 NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWL 229
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSVPTAIQLYDLQ++LGLSQPSKVIDWL
Sbjct: 51  NPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWL 110

Query: 230 IDVTRFEIDKLPPLHFPKDFD 251
           ++  + ++DKLPPL FP  F+
Sbjct: 111 LEAAKDDVDKLPPLQFPHGFN 131

[Close]

BLAST of CcUC01G015900 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.7e-30
Identity = 76/147 (51.70%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 170 NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWL 229
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSV TAIQ+YDLQ +LGLSQPSKVIDWL
Sbjct: 21  NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDWL 80

Query: 230 IDVTRFEIDKLPPLHFPKDF---DPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHR 289
           ++V + ++D LPPL FP  F   +PN + L  S   FP +  FD+     +A + E    
Sbjct: 81  LEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGES---FPGV--FDLGRTQREALDLEKRKW 140

Query: 290 LLL-HKLSSLSALQVQTNAINGNCCHF 313
           + L H    +      +N+I  N  +F
Sbjct: 141 VNLDHVFDHIDHHNHFSNSIQSNKLYF 162

[Close]

BLAST of CcUC01G015900 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.1e-28
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 170 NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWL 229
           +PRI RVS  FGGKDRHSKVCT++GLRDRR+RLSVPTAIQLYDLQ +LG+ QPSK +DWL
Sbjct: 62  DPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWL 121

Query: 230 IDVTRFEIDKLPPLHFPKDFDPNASIL-HHSSLL 263
           +D  + EID+LPPL    +   N SI  HH S L
Sbjct: 122 LDAAKEEIDELPPLPISPE---NFSIFNHHQSFL 152

[Close]

BLAST of CcUC01G015900 vs. ExPASy Swiss-Prot
Match: A2XMN1 (Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-20
Identity = 60/120 (50.00%), Postives = 71/120 (59.17%), Query Frame = 0


Query: 172 RIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID 231
           RI+RV    GGKDRHSKV T KG+RDRR+RLSV TAIQ YDLQ++LG  QPSK I+WLI+
Sbjct: 43  RIYRVRAT-GGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLIN 102

Query: 232 VTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHK 291
                ID LP L      DP A         F  IPH   ADAA   +  +   + L +K
Sbjct: 103 AASPAIDTLPSL------DPAA---------FAAIPHAAAADAAPTRRRSQQQQQQLSNK 146

[Close]

BLAST of CcUC01G015900 vs. ExPASy Swiss-Prot
Match: Q10CE8 (Transcription factor PCF6 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF6 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-19
Identity = 60/120 (50.00%), Postives = 71/120 (59.17%), Query Frame = 0


Query: 172 RIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID 231
           RI+RV    GGKDRHSKV T KG+RDRR+RLSV TAIQ YDLQ++LG  QPSK I+WLI+
Sbjct: 43  RIYRVRAT-GGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLIN 102

Query: 232 VTRFEIDKLPPLHFPKDFDPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHK 291
                ID LP L      DP A         F  IPH   ADAA   +  +   + L +K
Sbjct: 103 AASPAIDTLPSL------DPAA---------FAAIPH-AAADAAPTRRRSQQQQQQLSNK 145

[Close]

BLAST of CcUC01G015900 vs. ExPASy TrEMBL
Match: A0A6J1KPD9 (transcription factor TCP13-like OS=Cucurbita maxima OX=3661 GN=LOC111495302 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 3.2e-77
Identity = 158/217 (72.81%), Postives = 167/217 (76.96%), Query Frame = 0


Query: 148 EEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIR 207
           +EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIR
Sbjct: 14  QEGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIR 73

Query: 208 LSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSL 267
           LS PTAIQLYDLQN+LGLSQPSKVIDWL+DVTRF+IDKLPPLHFPKDFDPNAS LH    
Sbjct: 74  LSAPTAIQLYDLQNRLGLSQPSKVIDWLMDVTRFDIDKLPPLHFPKDFDPNASFLH---- 133

Query: 268 LFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPP 327
                 HFDIADAA KAK+EET   LLL K S      S SALQ+QTNA+  NCCHF+PP
Sbjct: 134 ------HFDIADAAAKAKHEETG-MLLLQKSSPSPNHASFSALQLQTNAMTENCCHFDPP 193

Query: 328 SFPFPLMDQINPVSFS-------FCPLTMPSEAPELL 346
           SFPFPLMDQ NP SFS       F PLTMP E    L
Sbjct: 194 SFPFPLMDQANPASFSSPSEQLLFRPLTMPPEVSSYL 219

[Close]

BLAST of CcUC01G015900 vs. ExPASy TrEMBL
Match: A0A6J1E7C6 (transcription factor PCF8-like OS=Cucurbita moschata OX=3662 GN=LOC111431389 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-75
Identity = 157/216 (72.69%), Postives = 164/216 (75.93%), Query Frame = 0


Query: 149 EGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRL 208
           EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRL
Sbjct: 15  EGVHVEAKQMEGKRKKGPSRQGPFLRGNPRIFRVSPLFGGKDRHSKVCTMKGLRDRRIRL 74

Query: 209 SVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHSSLL 268
           S PTAIQLYDLQN+LGLSQPSKVIDWLIDVTR +IDKLPPLHFPKDFDPNAS L      
Sbjct: 75  SAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRVDIDKLPPLHFPKDFDPNASFL------ 134

Query: 269 FPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPS 328
                H DIADAA KAK+EET   LLL KLS      S SALQ+QTNA+  NCCHF+PPS
Sbjct: 135 -----HLDIADAAAKAKHEETG-MLLLQKLSPSPNNASFSALQLQTNAMTENCCHFDPPS 194

Query: 329 FPFPLMDQINPVSFS-------FCPLTMPSEAPELL 346
           FPFPLMDQ NP SFS       F PLTMP E    L
Sbjct: 195 FPFPLMDQANPASFSSPSEQLLFRPLTMPPEVSSYL 218

[Close]

BLAST of CcUC01G015900 vs. ExPASy TrEMBL
Match: A0A0A0LTI3 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039270 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-70
Identity = 145/194 (74.74%), Postives = 148/194 (76.29%), Query Frame = 0


Query: 148 EEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRR 207
           EEG HDEAKQ +GK KKA        FLRGNPRIFRVSP FGGKDRHSKVCTIKGLRDRR
Sbjct: 7   EEGAHDEAKQRKGKMKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRDRR 66

Query: 208 IRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHS 267
           IRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPL FPKDFDPNASILHHS
Sbjct: 67  IRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLPFPKDFDPNASILHHS 126

Query: 268 SLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPF 327
                     DI DAA KAKNEETDH LL           VQTN ING C HFEPP+FPF
Sbjct: 127 ----------DIGDAAFKAKNEETDHTLL-----------VQTNDINGVCSHFEPPTFPF 179

Query: 328 PLM-DQINPVSFSF 333
           P M DQ N   FSF
Sbjct: 187 PFMDDQTNSAPFSF 179

[Close]

BLAST of CcUC01G015900 vs. ExPASy TrEMBL
Match: A0A5D3BIQ9 (Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001450 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.5e-69
Identity = 144/194 (74.23%), Postives = 149/194 (76.80%), Query Frame = 0


Query: 148 EEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRR 207
           E+G HDEAKQMEGKRKKA        FLRGNPRIFRVSP FGGKDRHSKVCTIKGLRDRR
Sbjct: 7   EDGAHDEAKQMEGKRKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRDRR 66

Query: 208 IRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHS 267
           IRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHS
Sbjct: 67  IRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHS 126

Query: 268 SLLFPQIPHFDIADAA-VKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFP 327
            +           DAA +KAKNEETD  LL           VQTN ING+  HFEPPSFP
Sbjct: 127 DI---------GGDAALMKAKNEETDQTLL-----------VQTNDINGDSSHFEPPSFP 180

Query: 328 FPLMDQINPVSFSF 333
           FP M Q N   FSF
Sbjct: 187 FPFMYQTNSSPFSF 180

[Close]

BLAST of CcUC01G015900 vs. ExPASy TrEMBL
Match: A0A1S3BEN2 (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103488791 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.5e-69
Identity = 144/194 (74.23%), Postives = 149/194 (76.80%), Query Frame = 0


Query: 148 EEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRR 207
           E+G HDEAKQMEGKRKKA        FLRGNPRIFRVSP FGGKDRHSKVCTIKGLRDRR
Sbjct: 7   EDGAHDEAKQMEGKRKKARTCSRQGQFLRGNPRIFRVSPFFGGKDRHSKVCTIKGLRDRR 66

Query: 208 IRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHS 267
           IRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHS
Sbjct: 67  IRLSIPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDPNASILHHS 126

Query: 268 SLLFPQIPHFDIADAA-VKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFP 327
            +           DAA +KAKNEETD  LL           VQTN ING+  HFEPPSFP
Sbjct: 127 DI---------GGDAALMKAKNEETDQTLL-----------VQTNDINGDSSHFEPPSFP 180

Query: 328 FPLMDQINPVSFSF 333
           FP M Q N   FSF
Sbjct: 187 FPFMYQTNSSPFSF 180

[Close]

BLAST of CcUC01G015900 vs. TAIR 10
Match: AT5G08060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 177.2 bits (448), Expect = 2.7e-44
Identity = 83/127 (65.35%), Postives = 104/127 (81.89%), Query Frame = 0


Query: 1   MAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNP 60
           ++ A+SSL+Q L+RYIKKPW+ITGPCA PEY  AVP A EYR+ CPAT  E+AIVP+S+P
Sbjct: 5   VSTAASSLVQNLRRYIKKPWQITGPCAHPEYLEAVPKATEYRLRCPATIDEEAIVPSSDP 64

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETK-FDPADFPKVYLTAAIEEDINA 120
           ETV++I Y+ RDQRRNRPPIRR +L K +V +MM E K FD +DFPKVYLT  +EED++ 
Sbjct: 65  ETVYNIVYHGRDQRRNRPPIRRYVLTKDNVVQMMNEKKSFDVSDFPKVYLTTTVEEDLDT 124

Query: 121 RGGGYQK 127
           RGGGY+K
Sbjct: 125 RGGGYEK 131

[Close]

BLAST of CcUC01G015900 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-32
Identity = 62/81 (76.54%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 170 NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWL 229
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSVPTAIQLYDLQ++LGLSQPSKVIDWL
Sbjct: 51  NPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWL 110

Query: 230 IDVTRFEIDKLPPLHFPKDFD 251
           ++  + ++DKLPPL FP  F+
Sbjct: 111 LEAAKDDVDKLPPLQFPHGFN 131

[Close]

BLAST of CcUC01G015900 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-31
Identity = 76/147 (51.70%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 170 NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWL 229
           NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSV TAIQ+YDLQ +LGLSQPSKVIDWL
Sbjct: 21  NPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDWL 80

Query: 230 IDVTRFEIDKLPPLHFPKDF---DPNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHR 289
           ++V + ++D LPPL FP  F   +PN + L  S   FP +  FD+     +A + E    
Sbjct: 81  LEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGES---FPGV--FDLGRTQREALDLEKRKW 140

Query: 290 LLL-HKLSSLSALQVQTNAINGNCCHF 313
           + L H    +      +N+I  N  +F
Sbjct: 141 VNLDHVFDHIDHHNHFSNSIQSNKLYF 162

[Close]

BLAST of CcUC01G015900 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-29
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 170 NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWL 229
           +PRI RVS  FGGKDRHSKVCT++GLRDRR+RLSVPTAIQLYDLQ +LG+ QPSK +DWL
Sbjct: 62  DPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWL 121

Query: 230 IDVTRFEIDKLPPLHFPKDFDPNASIL-HHSSLL 263
           +D  + EID+LPPL    +   N SI  HH S L
Sbjct: 122 LDAAKEEIDELPPLPISPE---NFSIFNHHQSFL 152

[Close]

BLAST of CcUC01G015900 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-29
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 170 NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWL 229
           +PRI RVS  FGGKDRHSKVCT++GLRDRR+RLSVPTAIQLYDLQ +LG+ QPSK +DWL
Sbjct: 62  DPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWL 121

Query: 230 IDVTRFEIDKLPPLHFPKDFDPNASIL-HHSSLL 263
           +D  + EID+LPPL    +   N SI  HH S L
Sbjct: 122 LDAAKEEIDELPPLPISPE---NFSIFNHHQSFL 152

The following BLAST results are available for this feature:

BLAST of CcUC01G015900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019990.1	5.8e-145	75.55	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038895251.1	1.3e-99	92.75	transcription factor PCF6 [Benincasa hispida]	[more]
XP_023001048.1	6.7e-77	72.81	transcription factor TCP13-like [Cucurbita maxima]	[more]
KAG6584403.1	2.0e-76	72.35	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023519980.1	4.3e-76	71.89	transcription factor TCP13-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC01G015900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME3	4.4e-31	76.54	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9LEZ9	3.7e-30	51.70	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
Q9S7W5	2.1e-28	65.96	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
A2XMN1	1.2e-20	50.00	Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV...	[more]
Q10CE8	1.3e-19	50.00	Transcription factor PCF6 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF6 PE=2 ...	[more]

BLAST of CcUC01G015900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPD9	3.2e-77	72.81	transcription factor TCP13-like OS=Cucurbita maxima OX=3661 GN=LOC111495302 PE=4...	[more]
A0A6J1E7C6	1.8e-75	72.69	transcription factor PCF8-like OS=Cucurbita moschata OX=3662 GN=LOC111431389 PE=...	[more]
A0A0A0LTI3	2.3e-70	74.74	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039270 PE=4 SV...	[more]
A0A5D3BIQ9	1.5e-69	74.23	Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BEN2	1.5e-69	74.23	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103488791 PE=4 SV=1	[more]

BLAST of CcUC01G015900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08060.1	2.7e-44	65.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G60970.1	3.1e-32	76.54	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT5G08070.1	2.7e-31	51.70	TCP domain protein 17	[more]
AT3G02150.1	1.5e-29	65.96	plastid transcription factor 1	[more]
AT3G02150.2	1.5e-29	65.96	plastid transcription factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 182..254 e-value: 7.3E-23 score: 81.8
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 182..240 score: 26.002558
None	No IPR available	PANTHER	PTHR36391	FURRY	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G015900.1	CcUC01G015900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding