CcUC01G015490 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G015490
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr01: 28284431 .. 28285940 (-)
RNA-Seq ExpressionCcUC01G015490
SyntenyCcUC01G015490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAAGAGATTTGGCATGGTTGAAGAGAGCTCTAATAGGCCTTGGAGGACCAAACCCACGTATGTGGCAAAATACGGGGTTGAAGAATTTGGGAAAAAACAAAGCTCTAGGGCCTGACGGATCCAGTTGAGTTTTTTTATCAAACATTGGAAGTTTTTCAAAGAAAACTTTCAGCGGCTGTTTGAGGAATTTTTACGAGAATGGAGTCATTTCCATATGGCAGCAAGTGAAACTCAGCAGCATATATTTTTTGACTGCCCATATGCAAACAAATGGCAAAATTCTCTGGAGTAATGCAGTCAAAGCTTTGTTATCAAAGTTATGGTTCGAAAGAAATCAACGGATCTTCCACAATAACGCAACACACTGGCAAAATCGTTTTGAGACAGCAAGGCTTAACTCCTCCTCATGGGGTTCCTTATCCAAATTCTTCGTAGATTACTCAGTGTAAGACATCAGCCTAAACTAGAGCGCGTTTCTCAAGTACGATTGTTAATTTATTGTTATTGTTGTACTCCTTAATTAGATATTATGATTGTTCGATTTGAAACTTTGGTAGGCTTAGGATTGTTGTATTTGCGAGGCTTTCTTGTTGGTCTCATTGATTTTTAGTACTTGTAGTCTTGATATTGGACAATTGGATGTTTCGGTTCTTTTGTATTGGATATGATGCGGGTGCTAAGGGAGTGTCACCCTAGTCGAGATGCCCGAGTGCACCTCCTGATTCTAAACTATATATTTGTTTTATCTTTTCATTATATCAATGAAAAATTTTGTTTCCATTTCGGAAAAAAAAAAAAAAAATCAGCGGGATTTTGATTATAGACAATCTAATTGTTATTTGATCAAATTACAGTTCATGATCAAACCATCTCGCCACGAAGATAAGGACAAAGAATTTTACACACCTTCGAAGAGGAAAGGGTGGAGTCAGTAGTCTACCAGCAAATCAGTCCAAGTCTAGCAAGCTGACTAGCTGGTAGATGTACTTCTAAGTTCTAACCAAATATTCCAATTTAATCAACGGTTAACAATTGTTAAAAACTGCACACCTTTCCCGATCAGAGCCTTGAAGGAAACACTACTCATGGATATCCCTTCAGCTTCAGCTACAGTATCCACCATCTCAAAACCTACCTGGAAATTTAGTCATAGCGTTAGCTACTGCTAGTGTTTCAATTTGTCTTCATAAAAGGACATCCAGATAACCTCCGTAAACAACATTAAACCCTAAATTCCCCGAGATAATCGTAAGTTCATGCTCGGGAAACTTCCCCCAGGGGTTTCCTACACTTAATTAATCAAACAGAAAATAAGGCATAATCTTCTATCGCTCGACATGGTTATCAACGAAACAGAGGCTAATTTCTGGAAAAGCAATTGCGCTCAAAGCAAAGATGAACAAAACATAAATGATAAGAGAAACTCCGAATTAGCAGAGATAGGACCATACGGACATTATGGCGCGTACGATCGTACTTCTTCCCGGGATTCCCGAGGCCCACGATGA

mRNA sequence

CAGAAGAGATTTGGCATGGTTGAAGAGAGCTCTAATAGGCCTTGGAGGACCAAACCCACGTATGTGGCAAAATACGGGAAAATAAGGCATAATCTTCTATCGCTCGACATGGTTATCAACGAAACAGAGGCTAATTTCTGGAAAAGCAATTGCGCTCAAAGCAAAGATGAACAAAACATAAATGATAAGAGAAACTCCGAATTAGCAGAGATAGGACCATACGGACATTATGGCGCGTACGATCGTACTTCTTCCCGGGATTCCCGAGGCCCACGATGA

Coding sequence (CDS)

CAGAAGAGATTTGGCATGGTTGAAGAGAGCTCTAATAGGCCTTGGAGGACCAAACCCACGTATGTGGCAAAATACGGGAAAATAAGGCATAATCTTCTATCGCTCGACATGGTTATCAACGAAACAGAGGCTAATTTCTGGAAAAGCAATTGCGCTCAAAGCAAAGATGAACAAAACATAAATGATAAGAGAAACTCCGAATTAGCAGAGATAGGACCATACGGACATTATGGCGCGTACGATCGTACTTCTTCCCGGGATTCCCGAGGCCCACGATGA

Protein sequence

QKRFGMVEESSNRPWRTKPTYVAKYGKIRHNLLSLDMVINETEANFWKSNCAQSKDEQNINDKRNSELAEIGPYGHYGAYDRTSSRDSRGPR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G015490.1CcUC01G015490.1mRNA