CcUC01G015480 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G015480
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Peptidyl-tRNA hydrolase
Location	CicolChr01: 28284016 .. 28291129 (+)
RNA-Seq Expression	CcUC01G015480
Synteny	CcUC01G015480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGCCAATTGTAAAGCTAAATCCTCAAGCCATTCCTTCCATCACCAAAAAAATCGTAGCCTCTTTTTCTCCTCTTCTCCTCCCGCCATTGTCGTCTCTTTCACTTGAATCCTCTCCCAATTCTTCCCATTTTGAATCTCTCCAAACCATTGAAGAAACACCATACCAAATATGAACATTGGTGTTTCTATATCTTCAATCGCCACCCTGCGCCTTCCTATTTGCCTCCATTGCTTTCGAACCTCCAAAACCCTGATTTCTTTCCCTTCTCTATCCCTCCTTAATTCTGGAACTTCACGTATCTTCTCGTCAATGTCTTCTTCCATTACTGCGTCGATGTCTACTTCCTCGTCTCCGACCACCGATCAGCTGCCTCTAGATGACAAGAAGCCTGCGCCGCCGCCGAAGCCATGGCTCATCGTGGGCCTCGGGAATCCCGGGAAGAAGTACGATCGTACGCGCCATAATGTCCGTATGGTCCTATCTCTGCTAATTCGGAGTTTCTCTTATCATTTATGTTTTGTTCATCTTTGCTTTGAGCGCAATTGCTTTTCCAGAAATTAGCCTCTGTTTCGTTGATAACCATGTCGAGCGATAGAAGATTATGCCTTATTTTCTGTTTGATTAATTAAGTGTAGGAAACCCCTGGGGGAAGTTTCCCGAGCATGAACTTACGATTATCTCGGGGAATTTAGGGTTTAATGTTGTTTACGGAGGTTATCTGGATGTCCTTTTATGAAGACAAATTGAAACACTAGCAGTAGCTAACGCTATGACTAAATTTCCAGGTAGGTTTTGAGATGGTGGATACTGTAGCTGAAGCTGAAGGGATATCCATGAGTAGTGTTTCCTTCAAGGCTCTGATCGGGAAAGGTGTGCAGTTTTTAACAATTGTTAACCGTTGATTAAATTGGAATATTTGGTTAGAACTTAGAAGTACATCTACCAGCTAGTCAGCTTGCTAGACTTGGACTGATTTGCTGGTAGACTACTGACTCCACCCTTTCCTCTTCGAAGGTGTGTAAAATTCTTTGTCCTTATCTTCGTGGCGAGATGGTTTGATCATGAACTGTAATTTGATCAAATAACAATTAGATTGTCTATAATCAAAATCCCGCTGATTTTTTTTTTTTTTTTCCGAAATGGAAACAAAATTTTTCATTGATATAATGAAAAGATAAAACAAATATATAGTTTAGAATCAGGAGGTGCACTCGGGCATCTCGACTAGGGTGACACTCCCTTAGCACCCGCATCATATCCAATACAAAAGAACCGAAACATCCAATTGTCCAATATCAAGACTACAAGTACTAAAAATCAATGAGACCAACAAGAAAGCCTCGCAAATACAACAATCCTAAGCCTACCAAAGTTTCAAATCGAACAATCATAATATCTAATTAAGGAGTACAACAATAACAATAAATTAACAATCGTACTTGAGAAACGCGCTCTAGTTTAGGCTGATGTCTTACACTGAGTAATCTACGAAGAATTTGGATAAGGAACCCCATGAGGAGGAGTTAAGCCTTGCTGTCTCAAAACGATTTTGCCAGTGTGTTGCGTTATTGTGGAAGATCCGTTGATTTCTTTCGAACCATAACTTTGATAACAAAGCTTTGACTGCATTACTCCAGAGAATTTTGCCATTTGTTTGCATATGGGCAGTCAAAAAATATATGCTGCTGAGTTTCACTTGCTGCCATATGGAAATGACTCCATTCTCGTAAAAATTCCTCAAACAGCCGCTGAAAGTTTTCTTTGAAAAACTTCCAATGTTTGATAAAAAAACTCAACTGGATCCGTCAGGCCCTAGAGCTTTGTTTTTTCCCAAATTCTTCAACCCCGTATTTTGCCACATACGTGGGTTTGGTCCTCCAAGGCCTATTAGAGCTCTCTTCAACCATGCCAAATCTCTTCTGCTGAAAACCGAGCTATGAGATTTATATTTTGTGCTGCTGATACCCTTCGCCAATCAAATAAAATAGGGACTGAACCTGCACTTGGTAATTTTGTGTAAAGTGATGAGTAGAAATTCAATATCATCCTCTCTATTTCCCGAAAGGAGGTGGTTGATATGCCTTGATCATCTGTTAATTCAGAAATCAGATTCTCTCCCTTTTTTTTTTTTGCAGATAGGAAGTGATGAAAAAAGCTGGTGTTTTCATCCCCAAGTGTCAGCCAACTGAGTTTACTTTTTTTAATCAAGTTCCTTTCATCCAATTTAACAATTTCTAGTAACTCAGCCTTCAGAGACATTCTTAAATTCAGCTCTACACTGTGATTGTCCTCCTCTTCTATCAGGTTTTCCAATCTTTCCAACTCCTCCAGAATATGCACTTCCCTTCTCTTCCTTTCTGATTGGTAGTTATTTTGCTAACTTTTCAGGGCTTCTTTTAACTTTCATAATTTCACAGATTTAGCCAGCCCATCCTTGAGGATGGAAATTACTCACTGTTCTTTCAATTAACCGATCCCATTCTTTGTTGAGCAGCCAACTATTGCAAATCCGGAAAGGGGAGGGACCCATTCAAATTTACCAGCCTCCAACAGTAGAGGGAAATAATCCGAGAGTAGCCAGGTTTGTCTAGTTACTCCTGCATTTTCAAACGCATCATCCCATTCTTTCGAAATAAAAAATGGGACAATAAGGAACCGTGAGTTTACACTACCACCATCCCTTTCCCATGTGAATCTTCCGTTGGACAGGGGAATCTCCATCAATTTGGTGGCTTCAATGAATTTATTGAATTTTTTTCATTCCTCTTGTCATTCTTCCCATTGGAAATCTATCTTGAGGCCGACAGGTTATATTGAAGTCTCCACCAATGCACTACAGTTCTAAAATATAATCTGATAGTGAGGATAATTCCGGCCAAATATAATTCCTTTCTCTGTAATTGGTTGGTCCATAAACGTTTGCAATCCAGCACACTTTCTTGCACAATGTCTTGCATTTGACAGACAGTGAATAGCCTCCCTTTAGTACTTCAATAACCAACACTTTACTTTTGTCCCACATTGTTAGAATACCTCCTGATCTTCCATAAGCCTCCACATTAAACCAACCTACCTCTTTCAAGCTCCACAATGACTTGAAGATTTCTAAGTTGAAGTCCTCTCGTTTGTTTCCTGAATTAGGACCAGTTCTGGATTGAATTTCTTTAGAAGTCTTCTGATTGCCATCCTTTTTGAAGTGTCTCCCAGACCTCTGACATTCCATGATAAGACTTTCATGCTTGGCTAATCAACAGCAATTTGCCTATATAGTCTGATCTCAACATTTAACCAACTGTGATGTCACAAGCTTCCATAATTGAGTGCCGATTTTTTGAGTCTTTATCTTTGCTTATAGGAAGGATTATTGAATCTTCATGTGGATTTCTTTCTATAGGATTGTCTTCCAGGAATAAATCACCAATATCCTGTCCGAAACAAGAACTCTGCTTCTTCTTGTCAAACCTCTGTTTCAACGCCACCTTCACAATCAATCTCCTCACTGCTTACACTTACTACTGATTCATTATCTGAATCTTGCTGATTGGCAGGACTTTTGATGTCATTATTTATCGGGGTGCCTCGCACAAAATGAATTTTAGAGCCAGGAATCTCAAAATCAGATTGATGAAATTTGTTTGAGATGGACAGAGCATGTTCTGACCTTGTTTCTTTCACTATTGGGAGTTGAACTCTGATATAGCAGCTTTCAAGCAAATCAGGATTCACAATTGCTGACCAGGAGTTGATGAAAGATGTTTGCTTTCTGGTGAAGTGTCTGGGGAAAGGCTTCAAAAGTCTTGAGCTTTTATTGGGAACCACCCGATGTCCAGAGGAAGTAGTAGAAACTCCCTTTGAAATTCTAATTATATTGCTGCACTCTCAATCCTTAACGACCATGTCTCTAAGATCCAGCTGGTTTTGCTGTTTTTGCTTGAAAGCTCTGTGGTTTGTGGTGTTTCCCATCAAAGCTTTCCTTTTAGCTTTAGTTTGCTAGAAGATCTCTTAGAGTCCTCGGTGCTTTGCTCTTCAAGAAGGCTAAAAGTTTCTGTCTCTGTTGTTGTCCTTGTACTTCCAATCTTTTGTGTGCATTTTGATGCAGCTTTTGCAGTTGGCTGGGTGTTCTTTCGTTCCTTTGGATAGTTGGTTTCTTTTCAGGGTCTTGGAATTTTTGTCATCTTCTTTTTTCTTGGGCGTTTGTTTCTTCTCTCTCTTTGGGGTTTTCAATCCTCAAACATATATTTTCCTTTTGCATCTATCTGTCAAAAGGTTGTTTCTAGTTAAAAAGATATCGCACGGTTCACTAATTGGAGTTTGTTTTACCAAATTTTATTGTATTGCAATTGAATATCAAGAAAAATGTTTCTTTCCCTACAAAATGAATTATTGTTCAGAAAAAAGTACTGGGGATTTGATTATTTCCCAGCTGTAAAAAAGGAGACATAGTCTCAATAAATGACTAAGAGGTCATGGGTTCAATCTATGGTGGCCACCTACCTATGATTTAATATCCTACAAGTTTCCTTGACACCAAAATGTTGTAGGATCAGGCGGGTTGTCCTGTAAGATCAGTCAAGGTGCATATAAGTTGGCATGGACACTCACGGATATCAAAAAATATATATATTTCCCAGCTGTAGATTATTAAAATAGTGAAGAAACCTTATCTGTGTACTTGTATTTCAGGTTTCATTGGGGATGTTCCTGTCATGCTGGCCAAGCCACAAACTTTTATGAATGCAAGTGGTGAGTCTGTAAGTAAGCTATCTCAAGGATCTCCATCCATTCTAGTTATTAGTTTTGTCCTTCTGTCTCAATGATTGATTTGGTATGCATTTTACGTTTGGTTGCAGGTTGGTGCTATTGTTTCCTACTATAAAATTCCATTGAAGCAAGTACTTGTGGTAAATATTTTATTCCCCATGTAAGATTATCAGTATTCTTGACGAGTGATATATCTACTTTTGGGGAGGACAAGAGAGGGGGTTGGGCTGTGGGGTGATCTGTGTGATTCATTTTTCCTCCTACCACATCTAAGCCATGAATTGAGATCCATACAACAGATTTTCGATGATATGGATTTGCCTTTTGCCAAATTGCGGATGCTGCCGAAGGGTGGCCATGGAGGGCATAATGGGTAATCTCTCTCTCTCTCTCTCTCTCTCTTTCCTTTCTTTTTCCTCTTTTTAAAAATATAATTCATTTTAATCTACGTTTTGGGTGTCTCAGTCTTCTGATTTTGTGGCATTTATTGTTTAATATCCTTAATACTGGGAGGTACAATGGTGGGTTTTCATATAATTTCTTCAGGGTCATGCTTCACACCTTCTGCCTTCTTGTGTATATATTAGCATTAGTTACATTCGTTATTAAAGAGTGAGCTTCTAAAAGAATGCGTGAGAGTGGGGGAAGTTTGATTCACTACATGATGATAACTGACCAATCTAATTCTCCGTGTTGTATCTGAACAATGCTGACTTCTATTTTTTATTTTTCCTTCCGTGAAGCAGTAGAGGCAGTGCATATGTTGTCCATTCCCGAAAAAAAGAAGCATAGTCCATTTTAATGGATACAGAATTATGTCCACACAAGGAAAAGTACACTTTCAATAAAATTTTTTACTCGAAAAGTTTTGACTGGAAAAACTCCAATAAAAAAAACGTACTTTCCTCAAATCTGAAGATGGATTTTTATTTTTGAATTTTTGCAGCTTTTAAGAGGAAAAAAATAGAATTTAATTGGGTTGACCGAATAAGTAAATGTGAAAGTTGCACAAAGATTAAAAGGGTACCATGTGAGGGCCTGATCAAAGAAAGCTCAGTTCAAGGATCTAGGATTGCGAGTTTTGATTGTATGGTTAAGTTTGTAATAGAATAAACATTAAGAAGAGCAATAGAAGTCAGAAGTATAAATTTTAATTGCTTATTTGTCCGTGGCAGGATGAGGAGTATTATTGATCACTTTAAAGGCAGTCGTGATTTCCCTCGATTAAGAATTGGTACGTACCTTGGGCTCTGTTAACACCTCCACCCTGCTTCTATAAAATTTCAGGTGTTAAATGGGTGAAAACATTCTAGGTATAGGGCGCCCTCCTGGGAAAATGGATGCTGCAAACTTTGTTCTTCGCCCCTTCAACAAACAAGAACGAGAAGAGGTGTGTAAAATGCCATCATATTTCCACTAAATGAAGCTTGTTGATAATCCGAACTGAGTTTAGTCTTAACCACTCAAATGGAATCATCTTTTTTCAGTTGAATTTTACATTGCAAGTTGGCACAGACGCGATACGGATTCTTTTGCTCGAAGGGTTCAACAAAAGTGCAACATTTGTCAACACCAACAAACCTCTGGAACAAATAGGTTGACAACATTCAATATTTAAACCTTTTTATAGTCTCTAAAAGGACTCCATTGTTTACTGTATGTATCAAACTGCTTTATACACGGGCGAATTCGCTACCAGTTTCAACTACCAACTTCCTCGGGATGGAAGGTGTATTGCAACAACAAACAATCAGTGTAGGATTTTGAACCACCCCATCTATGGTAATCACCTCACTCTCTCTGTTTGCTTCCTTTTGGATTGAAATCTCTTAGACATAAAGTTGTGATCTTTGAAGAGATCAATAAAGCTAAAAACCTCCCCCACTATGCAGTAAACCAACCGATAAAAGTTGAGGACAGGAATTGATAAAAGGGAGCTACCTCTACCTAACTTTTATTTGCTTTAATTATCTCATCTTGGCAAATCACCAATGGAGGCTCATTCTTTGCCCGTCTTGTCATCTTCTTCTATAATATGCATTTCCCTGGTTGGGTGGCCCATGTTCTCTCTGTAGTATAACGATTCAGCTCATTCATATTCTCTTCTTCATGTTTGTTTGCCAATGGTTTTCAGGCTTCTGCCGAATCTTCCCCATGGAATTGCCTCATACGTACTGATTCCATGTAGGTGGATCCCACAAAATTTTAAATGTTGGTGATGGGCTTAAAACGTAATGATTATTTGTAATTTCATACGACCTCTCTTCGTTGTTTGTCACAAAAGTAGTATTTATGAATTATGGGGATCCTTGTGTTAAATAATAAATGGAAGTAGACATTACAATAGTAC

mRNA sequence

CCCGCCAATTGTAAAGCTAAATCCTCAAGCCATTCCTTCCATCACCAAAAAAATCGTAGCCTCTTTTTCTCCTCTTCTCCTCCCGCCATTGTCGTCTCTTTCACTTGAATCCTCTCCCAATTCTTCCCATTTTGAATCTCTCCAAACCATTGAAGAAACACCATACCAAATATGAACATTGGTGTTTCTATATCTTCAATCGCCACCCTGCGCCTTCCTATTTGCCTCCATTGCTTTCGAACCTCCAAAACCCTGATTTCTTTCCCTTCTCTATCCCTCCTTAATTCTGGAACTTCACGTATCTTCTCGTCAATGTCTTCTTCCATTACTGCGTCGATGTCTACTTCCTCGTCTCCGACCACCGATCAGCTGCCTCTAGATGACAAGAAGCCTGCGCCGCCGCCGAAGCCATGGCTCATCGTGGGCCTCGGGAATCCCGGGAAGAAGTACGATCGTACGCGCCATAATGTAGGTTTTGAGATGGTGGATACTGTAGCTGAAGCTGAAGGGATATCCATGAGTAGTGTTTCCTTCAAGGCTCTGATCGGGAAAGGTTTCATTGGGGATGTTCCTGTCATGCTGGCCAAGCCACAAACTTTTATGAATGCAAGTGGTGAGTCTGTTGGTGCTATTGTTTCCTACTATAAAATTCCATTGAAGCAAGTACTTGTGATTTTCGATGATATGGATTTGCCTTTTGCCAAATTGCGGATGCTGCCGAAGGGTGGCCATGGAGGGCATAATGGGATGAGGAGTATTATTGATCACTTTAAAGGCAGTCGTGATTTCCCTCGATTAAGAATTGGGCGCCCTCCTGGGAAAATGGATGCTGCAAACTTTGTTCTTCGCCCCTTCAACAAACAAGAACGAGAAGAGTTGAATTTTACATTGCAAGTTGGCACAGACGCGATACGGATTCTTTTGCTCGAAGGGTTCAACAAAAGTGCAACATTTGTCAACACCAACAAACCTCTGGAACAAATAGTCTCTAAAAGGACTCCATTGTTTACTGTATGTATCAAACTGCTTTATACACGGGCGAATTCGCTACCAGTTTCAACTACCAACTTCCTCGGGATGGAAGGTGTATTGCAACAACAAACAATCAGTGCTTCTGCCGAATCTTCCCCATGGAATTGCCTCATACGTACTGATTCCATGTAGGTGGATCCCACAAAATTTTAAATGTTGGTGATGGGCTTAAAACGTAATGATTATTTGTAATTTCATACGACCTCTCTTCGTTGTTTGTCACAAAAGTAGTATTTATGAATTATGGGGATCCTTGTGTTAAATAATAAATGGAAGTAGACATTACAATAGTAC

Coding sequence (CDS)

ATGAACATTGGTGTTTCTATATCTTCAATCGCCACCCTGCGCCTTCCTATTTGCCTCCATTGCTTTCGAACCTCCAAAACCCTGATTTCTTTCCCTTCTCTATCCCTCCTTAATTCTGGAACTTCACGTATCTTCTCGTCAATGTCTTCTTCCATTACTGCGTCGATGTCTACTTCCTCGTCTCCGACCACCGATCAGCTGCCTCTAGATGACAAGAAGCCTGCGCCGCCGCCGAAGCCATGGCTCATCGTGGGCCTCGGGAATCCCGGGAAGAAGTACGATCGTACGCGCCATAATGTAGGTTTTGAGATGGTGGATACTGTAGCTGAAGCTGAAGGGATATCCATGAGTAGTGTTTCCTTCAAGGCTCTGATCGGGAAAGGTTTCATTGGGGATGTTCCTGTCATGCTGGCCAAGCCACAAACTTTTATGAATGCAAGTGGTGAGTCTGTTGGTGCTATTGTTTCCTACTATAAAATTCCATTGAAGCAAGTACTTGTGATTTTCGATGATATGGATTTGCCTTTTGCCAAATTGCGGATGCTGCCGAAGGGTGGCCATGGAGGGCATAATGGGATGAGGAGTATTATTGATCACTTTAAAGGCAGTCGTGATTTCCCTCGATTAAGAATTGGGCGCCCTCCTGGGAAAATGGATGCTGCAAACTTTGTTCTTCGCCCCTTCAACAAACAAGAACGAGAAGAGTTGAATTTTACATTGCAAGTTGGCACAGACGCGATACGGATTCTTTTGCTCGAAGGGTTCAACAAAAGTGCAACATTTGTCAACACCAACAAACCTCTGGAACAAATAGTCTCTAAAAGGACTCCATTGTTTACTGTATGTATCAAACTGCTTTATACACGGGCGAATTCGCTACCAGTTTCAACTACCAACTTCCTCGGGATGGAAGGTGTATTGCAACAACAAACAATCAGTGCTTCTGCCGAATCTTCCCCATGGAATTGCCTCATACGTACTGATTCCATGTAG

Protein sequence

MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSMSSSITASMSTSSSPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGTDAIRILLLEGFNKSATFVNTNKPLEQIVSKRTPLFTVCIKLLYTRANSLPVSTTNFLGMEGVLQQQTISASAESSPWNCLIRTDSM

Homology

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BLAST of CcUC01G015480 vs. NCBI nr
Match: XP_038893864.1 (peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Benincasa hispida] >XP_038893865.1 peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Benincasa hispida] >XP_038893866.1 peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 525.0 bits (1351), Expect = 4.6e-145
Identity = 276/316 (87.34%), Postives = 283/316 (89.56%), Query Frame = 0


Query: 1   MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSM-SSSITASMSTS 60
           MN+G SISS+  LRLPICLHCFRTSKTLISFPSLS LNSGTS IFSSM SSSITASMSTS
Sbjct: 1   MNVGSSISSVTALRLPICLHCFRTSKTLISFPSLSFLNSGTSHIFSSMTSSSITASMSTS 60

Query: 61  SSPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSV 120
           SSPTTDQLP+DDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSV
Sbjct: 61  SSPTTDQLPVDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSV 120

Query: 121 SFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKL 180
           SFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDD+DLPFAKL
Sbjct: 121 SFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKL 180

Query: 181 RMLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELN 240
           RMLPKGGHGGHNGMRSIIDH KGSRDFPRLR  IGRPPGKMDAANFVLRPFNKQEREELN
Sbjct: 181 RMLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELN 240

Query: 241 FTLQVGTDAIRILLLEGFNKSATFVNTNKPLEQIVSKRTPLFTVCIKLLYTRANSLPVST 300
           FTLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI                       VST
Sbjct: 241 FTLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI-----------------------VST 293

Query: 301 TNFLGMEGVLQQQTIS 314
           T FLG+EG+LQQQT+S
Sbjct: 301 TKFLGVEGLLQQQTVS 293

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BLAST of CcUC01G015480 vs. NCBI nr
Match: XP_008457243.1 (PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Cucumis melo])

HSP 1 Score: 484.6 bits (1246), Expect = 6.9e-133
Identity = 249/273 (91.21%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 1   MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSMSSSITASMSTSS 60
           MNIG SISS+A LRLP  +H FRTS+TLISFPSLSLL+S T   FSS++SSITASMSTSS
Sbjct: 1   MNIGASISSVAALRLPFSIHSFRTSRTLISFPSLSLLHSPTFHNFSSITSSITASMSTSS 60

Query: 61  SPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVS 120
           SPTTDQ  LDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVD VAEAEGIS+S+VS
Sbjct: 61  SPTTDQPALDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDAVAEAEGISISNVS 120

Query: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLR 180
           FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDD+DLPFAKLR
Sbjct: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLR 180

Query: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNF 240
           MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR  IGRPPGKMDAANFVLRPFNKQEREELNF
Sbjct: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNF 240

Query: 241 TLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 272
           TLQVG DAIRILLLEGFNKSATFVNTNKPLEQI
Sbjct: 241 TLQVGADAIRILLLEGFNKSATFVNTNKPLEQI 273

[Close]

BLAST of CcUC01G015480 vs. NCBI nr
Match: XP_004137468.1 (peptidyl-tRNA hydrolase, chloroplastic [Cucumis sativus] >KGN64111.1 hypothetical protein Csa_014269 [Cucumis sativus])

HSP 1 Score: 480.3 bits (1235), Expect = 1.3e-131
Identity = 248/273 (90.84%), Postives = 256/273 (93.77%), Query Frame = 0


Query: 1   MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSMSSSITASMSTSS 60
           M IG SISS+A LRLP   HCF TSKTLISFPSLSLL+S T  IFSS++SSITASMSTSS
Sbjct: 1   MIIGASISSVAALRLPFSFHCFPTSKTLISFPSLSLLHSPTFHIFSSITSSITASMSTSS 60

Query: 61  SPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVS 120
           SPTT+Q  LDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVD VAEAEGIS+S+VS
Sbjct: 61  SPTTEQPALDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDAVAEAEGISISNVS 120

Query: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLR 180
           FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDD+DLPFAKLR
Sbjct: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLR 180

Query: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNF 240
           MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR  IGRPPGKMDAANFVLRPFNKQEREELNF
Sbjct: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNF 240

Query: 241 TLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 272
           TLQVG DAIRILLLEGFNKSATFVNTNK LEQI
Sbjct: 241 TLQVGEDAIRILLLEGFNKSATFVNTNKSLEQI 273

[Close]

BLAST of CcUC01G015480 vs. NCBI nr
Match: TYJ98984.1 (peptidyl-tRNA hydrolase [Cucumis melo var. makuwa])

HSP 1 Score: 464.5 bits (1194), Expect = 7.4e-127
Identity = 243/273 (89.01%), Postives = 252/273 (92.31%), Query Frame = 0


Query: 1   MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSMSSSITASMSTSS 60
           MNIG SISS+A LRLP  +H FRTS+TLISFPSLSLL+S T   FSS++SSITASMSTSS
Sbjct: 1   MNIGASISSVAALRLPFSIHSFRTSRTLISFPSLSLLHSPTFHNFSSITSSITASMSTSS 60

Query: 61  SPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVS 120
           SPTTDQ  LDDKKPAPPPKPWLIVGLGNPGKKYDR      FEMVD VAEAEGIS+S+VS
Sbjct: 61  SPTTDQPALDDKKPAPPPKPWLIVGLGNPGKKYDR------FEMVDAVAEAEGISISNVS 120

Query: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLR 180
           FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDD+DLPFAKLR
Sbjct: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLR 180

Query: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNF 240
           MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR  IGRPPGKMDAANFVLRPFNKQEREELNF
Sbjct: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNF 240

Query: 241 TLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 272
           TLQVG DAIRILLLEGFNKSATFVNTNKPLEQI
Sbjct: 241 TLQVGADAIRILLLEGFNKSATFVNTNKPLEQI 267

[Close]

BLAST of CcUC01G015480 vs. NCBI nr
Match: XP_023541955.1 (peptidyl-tRNA hydrolase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 461.1 bits (1185), Expect = 8.2e-126
Identity = 234/273 (85.71%), Postives = 250/273 (91.58%), Query Frame = 0


Query: 1   MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSMSSSITASMSTSS 60
           M+ G S+SS+A LR PICLHCFRT +T ISFP LS LN G+  IF+SM+SS TASMSTSS
Sbjct: 1   MSFGASLSSVAALRFPICLHCFRTPRTPISFPYLS-LNPGSLHIFASMTSSFTASMSTSS 60

Query: 61  SPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVS 120
               DQL +++KKPAPPPKPWLIVGLGNPGKKY+RTRHNVGFEMVD VAE EGISMSSVS
Sbjct: 61  PLAPDQLAVEEKKPAPPPKPWLIVGLGNPGKKYERTRHNVGFEMVDAVAEVEGISMSSVS 120

Query: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLR 180
           FKALIGKGFIGDVP+MLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDD+DLPFAKLR
Sbjct: 121 FKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLR 180

Query: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNF 240
           MLPKGGHGGHNGMRSIIDH KGSRDFPRLR  IGRPPGKMDAANFV+RPFNKQEREEL+F
Sbjct: 181 MLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRPFNKQEREELDF 240

Query: 241 TLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 272
           T+QVG DAIRILLLEGFNKSATFVNTNKPLEQI
Sbjct: 241 TMQVGVDAIRILLLEGFNKSATFVNTNKPLEQI 272

[Close]

BLAST of CcUC01G015480 vs. ExPASy Swiss-Prot
Match: Q8GW64 (Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g18440 PE=2 SV=2)

HSP 1 Score: 329.3 bits (843), Expect = 4.9e-89
Identity = 183/280 (65.36%), Postives = 211/280 (75.36%), Query Frame = 0


Query: 8   SSIATLRLP--ICLHCFRTSKTLIS--FPSLSL------LNSGTSRIFSSMSSSIT-ASM 67
           + IA L  P   C   FR+  T +S   P   L      L    S+  SS S S++ +S 
Sbjct: 8   AKIANLSFPSNCCSLFFRSPATFLSPALPCRKLTKGIRGLEGLMSQCLSSSSQSLSFSSN 67

Query: 68  STSSSPTTDQL-PLDDKKPAPPP--KPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEG 127
           S SS P ++ L  L   KP  PP   PWLIVGLGNPGKKY  TRHNVGFEMVD +A+AEG
Sbjct: 68  SFSSQPESELLQALPSSKPKSPPLQLPWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEG 127

Query: 128 ISMSSVSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMD 187
           ISM++V+FKAL GKG IG++P+MLAKPQTFMN SGESVG IVS+YKIPLKQVLV++DD+D
Sbjct: 128 ISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLD 187

Query: 188 LPFAKLRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQ 247
           LPF KLR+LPKGGHGGHNGMRSIID  KGSRDFPRLR  IGRPPGKMD ANFVLR FN+Q
Sbjct: 188 LPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQ 247

Query: 248 EREELNFTLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 272
           E+EEL+ T Q G +AIRILLLEGFNKSATFVNT K +EQ+
Sbjct: 248 EQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRKSMEQL 287

[Close]

BLAST of CcUC01G015480 vs. ExPASy Swiss-Prot
Match: Q5N9Q7 (Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693900 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.0e-83
Identity = 144/195 (73.85%), Postives = 170/195 (87.18%), Query Frame = 0


Query: 79  KPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPVMLA 138
           KPWL VGLGNPGK Y  TRHNVGFEM+D +AEAEGIS+SS+ FKA++GKG IGD P+MLA
Sbjct: 54  KPWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLA 113

Query: 139 KPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLRMLPKGGHGGHNGMRSIID 198
           KPQTFMNASGESVG +VSY+KIPL QVLV++DD+DLPFAKLR+LPKGGHGGHNG+RSII+
Sbjct: 114 KPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIIN 173

Query: 199 HFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNFTLQVGTDAIRILLLEGFN 258
           H K +RDFPRLR  IGRPPGKMD ANFVLRPFN++E+EEL+F    G +A+RI+ LEGFN
Sbjct: 174 HLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFN 233

Query: 259 KSATFVNTNKPLEQI 272
           KSAT+VNT +  E +
Sbjct: 234 KSATYVNTAQSSEML 248

[Close]

BLAST of CcUC01G015480 vs. ExPASy Swiss-Prot
Match: Q6NLS8 (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19830 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 9.9e-58
Identity = 100/195 (51.28%), Postives = 144/195 (73.85%), Query Frame = 0


Query: 79  KPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPVMLA 138
           +PWL +GLGNPG KY  TRHN+GFEM+D  AE+ GI M+ V+FKA++G+GF+ D+PV+LA
Sbjct: 17  RPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILA 76

Query: 139 KPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLRMLPKGGHGGHNGMRSIID 198
           KPQT+MN SGES G + +YYK+PL +VLV+ DDM LP   LR+  KGGHG HNG++S+++
Sbjct: 77  KPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMN 136

Query: 199 HFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNFTLQVGTDAIRILLLEGFN 258
           HF+G+R+F RLR  IG+PPG+MD   F+L+ F+   RE ++  L  G DA++++L + F 
Sbjct: 137 HFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFG 196

Query: 259 KSATFVNTNKPLEQI 272
           +S    N  +  + +
Sbjct: 197 ESWRLFNVEQKYKHL 211

[Close]

BLAST of CcUC01G015480 vs. ExPASy Swiss-Prot
Match: Q9LF14 (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRS2B PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 4.2e-56
Identity = 99/186 (53.23%), Postives = 140/186 (75.27%), Query Frame = 0


Query: 80  PWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPVMLAK 139
           PWLIVGLGNPG KY  TRHNVGFEM+D +A  EG+ M+++  KALIG G I DVP++LAK
Sbjct: 45  PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAK 104

Query: 140 PQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLRMLPKGGHGGHNGMRSIIDH 199
           PQT+MN SGESVG++ S+Y++PL+ +L+I+D+M LP   LR+ PKGG G HNG++S++ H
Sbjct: 105 PQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 164

Query: 200 FKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNFTLQVGTDAIRILLLEGFNK 259
             G R+FPRL   IG+PPG MD   F+L+ F+  E++++   L+ G++A++ L+L GFN+
Sbjct: 165 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQ 224

Query: 260 SATFVN 264
             +  N
Sbjct: 225 GISRFN 230

[Close]

BLAST of CcUC01G015480 vs. ExPASy Swiss-Prot
Match: Q9M5P4 (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays OX=4577 GN=CRS2 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.0e-54
Identity = 106/224 (47.32%), Postives = 150/224 (66.96%), Query Frame = 0


Query: 45  FSSMSSSITASMSTSSSPTTDQLPLDDKKPAPPP---KPWLIVGLGNPGKKYDRTRHNVG 104
           F     S+TA +     P    +      PA  P    PWLI GLGNPG KY  TRHNVG
Sbjct: 23  FRMPRKSLTAPLHRIRRPRPFTVVSSVPDPAAGPVEYTPWLIAGLGNPGNKYYGTRHNVG 82

Query: 105 FEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIP 164
           FEMVD +A  EGI+M+++  K+L+G G IG+VPV++ KPQ++MN SGE++G + +YY++P
Sbjct: 83  FEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVP 142

Query: 165 LKQVLVIFDDMDLPFAKLRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMD 224
           L+ +L+I+DD  LP   LR+  KGGHG HNG++++I+H  G R+FPRL   IG PPGKMD
Sbjct: 143 LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMD 202

Query: 225 AANFVLRPFNKQEREELNFTLQVGTDAIRILLLEGFNKSATFVN 264
              F+L+ F+ +ER +++  L+ G DA+R L+L+GF+ S    N
Sbjct: 203 PRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFN 246

[Close]

BLAST of CcUC01G015480 vs. ExPASy TrEMBL
Match: A0A1S3C5R3 (peptidyl-tRNA hydrolase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496915 PE=3 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 3.4e-133
Identity = 249/273 (91.21%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 1   MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSMSSSITASMSTSS 60
           MNIG SISS+A LRLP  +H FRTS+TLISFPSLSLL+S T   FSS++SSITASMSTSS
Sbjct: 1   MNIGASISSVAALRLPFSIHSFRTSRTLISFPSLSLLHSPTFHNFSSITSSITASMSTSS 60

Query: 61  SPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVS 120
           SPTTDQ  LDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVD VAEAEGIS+S+VS
Sbjct: 61  SPTTDQPALDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDAVAEAEGISISNVS 120

Query: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLR 180
           FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDD+DLPFAKLR
Sbjct: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLR 180

Query: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNF 240
           MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR  IGRPPGKMDAANFVLRPFNKQEREELNF
Sbjct: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNF 240

Query: 241 TLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 272
           TLQVG DAIRILLLEGFNKSATFVNTNKPLEQI
Sbjct: 241 TLQVGADAIRILLLEGFNKSATFVNTNKPLEQI 273

[Close]

BLAST of CcUC01G015480 vs. ExPASy TrEMBL
Match: A0A0A0LVQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042230 PE=3 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 6.3e-132
Identity = 248/273 (90.84%), Postives = 256/273 (93.77%), Query Frame = 0


Query: 1   MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSMSSSITASMSTSS 60
           M IG SISS+A LRLP   HCF TSKTLISFPSLSLL+S T  IFSS++SSITASMSTSS
Sbjct: 1   MIIGASISSVAALRLPFSFHCFPTSKTLISFPSLSLLHSPTFHIFSSITSSITASMSTSS 60

Query: 61  SPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVS 120
           SPTT+Q  LDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVD VAEAEGIS+S+VS
Sbjct: 61  SPTTEQPALDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDAVAEAEGISISNVS 120

Query: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLR 180
           FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDD+DLPFAKLR
Sbjct: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLR 180

Query: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNF 240
           MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR  IGRPPGKMDAANFVLRPFNKQEREELNF
Sbjct: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNF 240

Query: 241 TLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 272
           TLQVG DAIRILLLEGFNKSATFVNTNK LEQI
Sbjct: 241 TLQVGEDAIRILLLEGFNKSATFVNTNKSLEQI 273

[Close]

BLAST of CcUC01G015480 vs. ExPASy TrEMBL
Match: A0A5D3BIU3 (Peptidyl-tRNA hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001870 PE=3 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 3.6e-127
Identity = 243/273 (89.01%), Postives = 252/273 (92.31%), Query Frame = 0


Query: 1   MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSMSSSITASMSTSS 60
           MNIG SISS+A LRLP  +H FRTS+TLISFPSLSLL+S T   FSS++SSITASMSTSS
Sbjct: 1   MNIGASISSVAALRLPFSIHSFRTSRTLISFPSLSLLHSPTFHNFSSITSSITASMSTSS 60

Query: 61  SPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVS 120
           SPTTDQ  LDDKKPAPPPKPWLIVGLGNPGKKYDR      FEMVD VAEAEGIS+S+VS
Sbjct: 61  SPTTDQPALDDKKPAPPPKPWLIVGLGNPGKKYDR------FEMVDAVAEAEGISISNVS 120

Query: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLR 180
           FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDD+DLPFAKLR
Sbjct: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLR 180

Query: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNF 240
           MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR  IGRPPGKMDAANFVLRPFNKQEREELNF
Sbjct: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNF 240

Query: 241 TLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 272
           TLQVG DAIRILLLEGFNKSATFVNTNKPLEQI
Sbjct: 241 TLQVGADAIRILLLEGFNKSATFVNTNKPLEQI 267

[Close]

BLAST of CcUC01G015480 vs. ExPASy TrEMBL
Match: A0A6J1C906 (peptidyl-tRNA hydrolase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008552 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 4.0e-126
Identity = 241/275 (87.64%), Postives = 247/275 (89.82%), Query Frame = 0


Query: 1   MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSMSSSITASMSTSS 60
           MNIGVSISSIA LRLPI LHCFRTSK L SFP     NSG+ RIFS        SMSTSS
Sbjct: 1   MNIGVSISSIAALRLPIRLHCFRTSKILTSFP-----NSGSLRIFS--------SMSTSS 60

Query: 61  SPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVS 120
            PT DQL +DDKKP+PPPKPWLIVGLGNPGKKYD TRHNVGFEMVDTVAEAEGISMSSVS
Sbjct: 61  PPTADQLAVDDKKPSPPPKPWLIVGLGNPGKKYDGTRHNVGFEMVDTVAEAEGISMSSVS 120

Query: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLR 180
           FKALIGKGFIGDVP+MLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDD+DLPF KLR
Sbjct: 121 FKALIGKGFIGDVPIMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFGKLR 180

Query: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNF 240
           MLPKGGHGG NGMRSIIDH KGSRDFPRLR  IGRPPGKMDAANFVLRPFNKQEREELNF
Sbjct: 181 MLPKGGHGGQNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNF 240

Query: 241 TLQVGTDAIRILLLEGFNKSATFVNTNKPLEQIVS 274
           TLQVG +AIRILLLEGFNKSATFVNTNKPLEQIVS
Sbjct: 241 TLQVGLEAIRILLLEGFNKSATFVNTNKPLEQIVS 262

[Close]

BLAST of CcUC01G015480 vs. ExPASy TrEMBL
Match: A0A6J1JW15 (peptidyl-tRNA hydrolase, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490211 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 8.9e-126
Identity = 236/273 (86.45%), Postives = 250/273 (91.58%), Query Frame = 0


Query: 1   MNIGVSISSIATLRLPICLHCFRTSKTLISFPSLSLLNSGTSRIFSSMSSSITASMSTSS 60
           MNI  S+SS+A LRLPICLHCF T +T ISFPSLS LN  +  IFSSM+SSITASMSTSS
Sbjct: 1   MNIAASLSSLAALRLPICLHCFPTFRTPISFPSLS-LNPPSLHIFSSMTSSITASMSTSS 60

Query: 61  SPTTDQLPLDDKKPAPPPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVS 120
               DQL +++KKPAPPPKPWLIVGLGNPGKKY+RTRHNVGFEM+D VAE EGISMSS S
Sbjct: 61  PLAPDQLAVEEKKPAPPPKPWLIVGLGNPGKKYERTRHNVGFEMLDAVAEVEGISMSSAS 120

Query: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLR 180
           FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDD+DLPFAKLR
Sbjct: 121 FKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLR 180

Query: 181 MLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNF 240
           MLPKGGHGGHNGMRSIIDH KGSRDFPRLR  IGRPPGKMDAANFV+RPFNKQEREEL+F
Sbjct: 181 MLPKGGHGGHNGMRSIIDHLKGSRDFPRLRIGIGRPPGKMDAANFVMRPFNKQEREELDF 240

Query: 241 TLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 272
           T+QVG DAIRILLLEGFNKSATFVNTNKPLEQI
Sbjct: 241 TMQVGVDAIRILLLEGFNKSATFVNTNKPLEQI 272

[Close]

BLAST of CcUC01G015480 vs. TAIR 10
Match: AT1G18440.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 329.3 bits (843), Expect = 3.5e-90
Identity = 183/280 (65.36%), Postives = 211/280 (75.36%), Query Frame = 0


Query: 8   SSIATLRLP--ICLHCFRTSKTLIS--FPSLSL------LNSGTSRIFSSMSSSIT-ASM 67
           + IA L  P   C   FR+  T +S   P   L      L    S+  SS S S++ +S 
Sbjct: 8   AKIANLSFPSNCCSLFFRSPATFLSPALPCRKLTKGIRGLEGLMSQCLSSSSQSLSFSSN 67

Query: 68  STSSSPTTDQL-PLDDKKPAPPP--KPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEG 127
           S SS P ++ L  L   KP  PP   PWLIVGLGNPGKKY  TRHNVGFEMVD +A+AEG
Sbjct: 68  SFSSQPESELLQALPSSKPKSPPLQLPWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEG 127

Query: 128 ISMSSVSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMD 187
           ISM++V+FKAL GKG IG++P+MLAKPQTFMN SGESVG IVS+YKIPLKQVLV++DD+D
Sbjct: 128 ISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLD 187

Query: 188 LPFAKLRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQ 247
           LPF KLR+LPKGGHGGHNGMRSIID  KGSRDFPRLR  IGRPPGKMD ANFVLR FN+Q
Sbjct: 188 LPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQ 247

Query: 248 EREELNFTLQVGTDAIRILLLEGFNKSATFVNTNKPLEQI 272
           E+EEL+ T Q G +AIRILLLEGFNKSATFVNT K +EQ+
Sbjct: 248 EQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRKSMEQL 287

[Close]

BLAST of CcUC01G015480 vs. TAIR 10
Match: AT5G19830.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 225.3 bits (573), Expect = 7.1e-59
Identity = 100/195 (51.28%), Postives = 144/195 (73.85%), Query Frame = 0


Query: 79  KPWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPVMLA 138
           +PWL +GLGNPG KY  TRHN+GFEM+D  AE+ GI M+ V+FKA++G+GF+ D+PV+LA
Sbjct: 17  RPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILA 76

Query: 139 KPQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLRMLPKGGHGGHNGMRSIID 198
           KPQT+MN SGES G + +YYK+PL +VLV+ DDM LP   LR+  KGGHG HNG++S+++
Sbjct: 77  KPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMN 136

Query: 199 HFKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNFTLQVGTDAIRILLLEGFN 258
           HF+G+R+F RLR  IG+PPG+MD   F+L+ F+   RE ++  L  G DA++++L + F 
Sbjct: 137 HFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFG 196

Query: 259 KSATFVNTNKPLEQI 272
           +S    N  +  + +
Sbjct: 197 ESWRLFNVEQKYKHL 211

[Close]

BLAST of CcUC01G015480 vs. TAIR 10
Match: AT5G16140.1 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 219.9 bits (559), Expect = 3.0e-57
Identity = 99/186 (53.23%), Postives = 140/186 (75.27%), Query Frame = 0


Query: 80  PWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPVMLAK 139
           PWLIVGLGNPG KY  TRHNVGFEM+D +A  EG+ M+++  KALIG G I DVP++LAK
Sbjct: 45  PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAK 104

Query: 140 PQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLRMLPKGGHGGHNGMRSIIDH 199
           PQT+MN SGESVG++ S+Y++PL+ +L+I+D+M LP   LR+ PKGG G HNG++S++ H
Sbjct: 105 PQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 164

Query: 200 FKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNFTLQVGTDAIRILLLEGFNK 259
             G R+FPRL   IG+PPG MD   F+L+ F+  E++++   L+ G++A++ L+L GFN+
Sbjct: 165 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQ 224

Query: 260 SATFVN 264
             +  N
Sbjct: 225 GISRFN 230

[Close]

BLAST of CcUC01G015480 vs. TAIR 10
Match: AT5G16140.2 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 219.9 bits (559), Expect = 3.0e-57
Identity = 99/186 (53.23%), Postives = 140/186 (75.27%), Query Frame = 0


Query: 80  PWLIVGLGNPGKKYDRTRHNVGFEMVDTVAEAEGISMSSVSFKALIGKGFIGDVPVMLAK 139
           PWLIVGLGNPG KY  TRHNVGFEM+D +A  EG+ M+++  KALIG G I DVP++LAK
Sbjct: 45  PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAK 104

Query: 140 PQTFMNASGESVGAIVSYYKIPLKQVLVIFDDMDLPFAKLRMLPKGGHGGHNGMRSIIDH 199
           PQT+MN SGESVG++ S+Y++PL+ +L+I+D+M LP   LR+ PKGG G HNG++S++ H
Sbjct: 105 PQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 164

Query: 200 FKGSRDFPRLR--IGRPPGKMDAANFVLRPFNKQEREELNFTLQVGTDAIRILLLEGFNK 259
             G R+FPRL   IG+PPG MD   F+L+ F+  E++++   L+ G++A++ L+L GFN+
Sbjct: 165 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQ 224

Query: 260 SATFVN 264
             +  N
Sbjct: 225 GISRFN 230

[Close]

BLAST of CcUC01G015480 vs. TAIR 10
Match: AT5G38290.2 (Peptidyl-tRNA hydrolase family protein )

HSP 1 Score: 205.7 bits (522), Expect = 5.8e-53
Identity = 103/216 (47.69%), Postives = 144/216 (66.67%), Query Frame = 0


Query: 51  SITASMSTSSSPTTDQLPLDDKKPAP-PPKPWLIVGLGNPGKKYDRTRHNVGFEMVDTVA 110
           S T S S   S     LP+ D K       PWLIVGLGNPG KY  TRHN+GFEM+D +A
Sbjct: 25  SQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIA 84

Query: 111 EAEGISMSSVSFKALIGKGFIGDVPVMLAKPQTFMNASGESVGAIVSYYKIPLKQVLVIF 170
            A  ISM+++  KAL+G G +G+VP++L KPQ +MN SGESVG + +YY+IPL+ +L+I+
Sbjct: 85  RATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIY 144

Query: 171 DDMDLPFAKLRMLPKGGHGGHNGMRSIIDHFKGSRDFPRLR--IGRPPGKMDAANFVLRP 230
           DDM L    LR+ PKGGH  HNG++++ +H  G R +PRL   IG PPG MD   F+L+ 
Sbjct: 145 DDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQK 204

Query: 231 FNKQEREELNFTLQVGTDAIRILLLEGFNKSATFVN 264
           F+  ER++++  L+ G + ++ L+ EGF+ S +  N
Sbjct: 205 FSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFN 240

The following BLAST results are available for this feature:

BLAST of CcUC01G015480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893864.1	4.6e-145	87.34	peptidyl-tRNA hydrolase, mitochondrial isoform X1 [Benincasa hispida] >XP_038893...	[more]
XP_008457243.1	6.9e-133	91.21	PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Cucumis melo]	[more]
XP_004137468.1	1.3e-131	90.84	peptidyl-tRNA hydrolase, chloroplastic [Cucumis sativus] >KGN64111.1 hypothetica...	[more]
TYJ98984.1	7.4e-127	89.01	peptidyl-tRNA hydrolase [Cucumis melo var. makuwa]	[more]
XP_023541955.1	8.2e-126	85.71	peptidyl-tRNA hydrolase, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC01G015480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW64	4.9e-89	65.36	Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g18...	[more]
Q5N9Q7	4.0e-83	73.85	Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6NLS8	9.9e-58	51.28	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g19...	[more]
Q9LF14	4.2e-56	53.23	Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Ara...	[more]
Q9M5P4	3.0e-54	47.32	Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea m...	[more]

BLAST of CcUC01G015480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C5R3	3.4e-133	91.21	peptidyl-tRNA hydrolase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496915 P...	[more]
A0A0A0LVQ7	6.3e-132	90.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042230 PE=3 SV=1	[more]
A0A5D3BIU3	3.6e-127	89.01	Peptidyl-tRNA hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1C906	4.0e-126	87.64	peptidyl-tRNA hydrolase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1JW15	8.9e-126	86.45	peptidyl-tRNA hydrolase, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CcUC01G015480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18440.1	3.5e-90	65.36	Peptidyl-tRNA hydrolase family protein	[more]
AT5G19830.1	7.1e-59	51.28	Peptidyl-tRNA hydrolase family protein	[more]
AT5G16140.1	3.0e-57	53.23	Peptidyl-tRNA hydrolase family protein	[more]
AT5G16140.2	3.0e-57	53.23	Peptidyl-tRNA hydrolase family protein	[more]
AT5G38290.2	5.8e-53	47.69	Peptidyl-tRNA hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001328	Peptidyl-tRNA hydrolase	PFAM	PF01195	Pept_tRNA_hydro	coord: 82..258 e-value: 8.4E-58 score: 195.2
IPR001328	Peptidyl-tRNA hydrolase	TIGRFAM	TIGR00447	TIGR00447	coord: 82..259 e-value: 6.4E-52 score: 173.9
IPR001328	Peptidyl-tRNA hydrolase	PANTHER	PTHR17224	PEPTIDYL-TRNA HYDROLASE	coord: 26..268
IPR001328	Peptidyl-tRNA hydrolase	HAMAP	MF_00083	Pept_tRNA_hydro_bact	coord: 80..256 score: 31.453199
IPR036416	Peptidyl-tRNA hydrolase superfamily	GENE3D	3.40.50.1470		coord: 69..265 e-value: 1.4E-68 score: 232.2
IPR036416	Peptidyl-tRNA hydrolase superfamily	SUPERFAMILY	53178	Peptidyl-tRNA hydrolase-like	coord: 80..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..67
None	No IPR available	PANTHER	PTHR17224:SF5	PEPTIDYL-TRNA HYDROLASE CHLOROPLASTIC	coord: 26..268
IPR018171	Peptidyl-tRNA hydrolase, conserved site	PROSITE	PS01195	PEPT_TRNA_HYDROL_1	coord: 93..106
IPR018171	Peptidyl-tRNA hydrolase, conserved site	PROSITE	PS01196	PEPT_TRNA_HYDROL_2	coord: 186..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G015480.1	CcUC01G015480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity