CcUC01G015420 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGGGAAAAAAGGAAGGCAATGTCGCCGGAGGAGAACGGCGGAGTGGTTGAAGAGACGAAGAAGAAGAAGAAGAAGAAGAAAGTGAGGAAGGAGGAGAAAGAGGCGGCGGAGGTGGAGGAGCCAACAACGGAGGAGGTGGAGGAGTTTTATGCCATTTTGAGGAGGATGGATGTGGCTTTGCGGTACTTGAAAGGGAGGAGGCTGCCGGAGAGAAAAACAACGGCGGAGACGGCGGCGATTGAGGAACATAAGGAACTGAATTTGAATGAAGTGCCTTCAGATTCTTCTAATTAA ATGGAGAGGGAAAAAAGGAAGGCAATGTCGCCGGAGGAGAACGGCGGAGTGGTTGAAGAGACGAAGAAGAAGAAGAAGAAGAAGAAAGTGAGGAAGGAGGAGAAAGAGGCGGCGGAGGTGGAGGAGCCAACAACGGAGGAGGTGGAGGAGTTTTATGCCATTTTGAGGAGGATGGATGTGGCTTTGCGGTACTTGAAAGGGAGGAGGCTGCCGGAGAGAAAAACAACGGCGGAGACGGCGGCGATTGAGGAACATAAGGAACTGAATTTGAATGAAGTGCCTTCAGATTCTTCTAATTAA ATGGAGAGGGAAAAAAGGAAGGCAATGTCGCCGGAGGAGAACGGCGGAGTGGTTGAAGAGACGAAGAAGAAGAAGAAGAAGAAGAAAGTGAGGAAGGAGGAGAAAGAGGCGGCGGAGGTGGAGGAGCCAACAACGGAGGAGGTGGAGGAGTTTTATGCCATTTTGAGGAGGATGGATGTGGCTTTGCGGTACTTGAAAGGGAGGAGGCTGCCGGAGAGAAAAACAACGGCGGAGACGGCGGCGATTGAGGAACATAAGGAACTGAATTTGAATGAAGTGCCTTCAGATTCTTCTAATTAA MEREKRKAMSPEENGGVVEETKKKKKKKKVRKEEKEAAEVEEPTTEEVEEFYAILRRMDVALRYLKGRRLPERKTTAETAAIEEHKELNLNEVPSDSSN Homology
BLAST of CcUC01G015420 vs. NCBI nr
Match: KGN64116.1 (hypothetical protein Csa_013670 [Cucumis sativus]) HSP 1 Score: 123.2 bits (308), Expect = 1.2e-24 Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 0
BLAST of CcUC01G015420 vs. NCBI nr
Match: KAG6584363.1 (hypothetical protein SDJN03_20295, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 106.3 bits (264), Expect = 1.5e-19 Identity = 71/111 (63.96%), Postives = 83/111 (74.77%), Query Frame = 0
BLAST of CcUC01G015420 vs. NCBI nr
Match: XP_017636930.1 (PREDICTED: vacuolar protein sorting-associated protein 13-like protein [Gossypium arboreum]) HSP 1 Score: 54.3 bits (129), Expect = 6.9e-04 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of CcUC01G015420 vs. ExPASy TrEMBL
Match: A0A0A0LVR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042280 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 5.9e-25 Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 0
BLAST of CcUC01G015420 vs. ExPASy TrEMBL
Match: A0A6P4Q1U1 (vacuolar protein sorting-associated protein 13-like protein OS=Gossypium arboreum OX=29729 GN=LOC108478995 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.4e-04 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|