CcUC01G015260 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G015260
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr01: 28082963 .. 28083343 (+)
RNA-Seq ExpressionCcUC01G015260
SyntenyCcUC01G015260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAATTCTAGTGCTTTGTCCATTATACTCGCACGTGCTGCCGTTCCTTATATTTTCCAGAAGCCCAACCGTGACGTTGCCGCTCCCGAACCCGGTCGGGTGAGGCCCCTGCTTCGACCAGTCGGTCCAAGTCAGAGTCCGGTTCGAATTCCTCTCCCCGAACCGTATACCCATCATCGTCGGCAAGTAGTGCTCATCCGAAATGCAACCCGGGCGGCAGTGCTTTTCGAAGAGTGGGAAGTACTTCTGGTCCGCCACCACTTCCGTCGCCGTCCGTCGGTCTATTTCGAACCACTGAGAGCCTTTCCGCCATTGGGCCTTGGTGATTGTGGGCTTCATTTTGGGCCTGTAGCGGTTTCGGCCCAAACGGCCCGGTAA

mRNA sequence

ATGGCAAATTCTAGTGCTTTGTCCATTATACTCGCACGTGCTGCCGTTCCTTATATTTTCCAGAAGCCCAACCGTGACGTTGCCGCTCCCGAACCCGGTCGGGTGAGGCCCCTGCTTCGACCAGTCGGTCCAAGTCAGAGTCCGGTTCGAATTCCTCTCCCCGAACCGTATACCCATCATCGTCGGCAAGTAGTGCTCATCCGAAATGCAACCCGGGCGGCAGTGCTTTTCGAAGAGTGGGAAGTACTTCTGGTCCGCCACCACTTCCGTCGCCGTCCGTCGGTCTATTTCGAACCACTGAGAGCCTTTCCGCCATTGGGCCTTGGTGATTGTGGGCTTCATTTTGGGCCTGTAGCGGTTTCGGCCCAAACGGCCCGGTAA

Coding sequence (CDS)

ATGGCAAATTCTAGTGCTTTGTCCATTATACTCGCACGTGCTGCCGTTCCTTATATTTTCCAGAAGCCCAACCGTGACGTTGCCGCTCCCGAACCCGGTCGGGTGAGGCCCCTGCTTCGACCAGTCGGTCCAAGTCAGAGTCCGGTTCGAATTCCTCTCCCCGAACCGTATACCCATCATCGTCGGCAAGTAGTGCTCATCCGAAATGCAACCCGGGCGGCAGTGCTTTTCGAAGAGTGGGAAGTACTTCTGGTCCGCCACCACTTCCGTCGCCGTCCGTCGGTCTATTTCGAACCACTGAGAGCCTTTCCGCCATTGGGCCTTGGTGATTGTGGGCTTCATTTTGGGCCTGTAGCGGTTTCGGCCCAAACGGCCCGGTAA

Protein sequence

MANSSALSIILARAAVPYIFQKPNRDVAAPEPGRVRPLLRPVGPSQSPVRIPLPEPYTHHRRQVVLIRNATRAAVLFEEWEVLLVRHHFRRRPSVYFEPLRAFPPLGLGDCGLHFGPVAVSAQTAR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..53

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G015260.1CcUC01G015260.1mRNA