CcUC01G015220 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G015220
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr01: 27983278 .. 27987891 (+)
RNA-Seq ExpressionCcUC01G015220
SyntenyCcUC01G015220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTAGCCGTGTTGGAGTCCCAAATTCTAGTTTCTATATCCCAAATTCAAACACATTTGGATGTTAGAAAGGAACTTTTGGAGGTTTGGAGGTAATTTAAATGTAAAGATGTCTACGTTTGGGGTGGGGAATGGGGAGGGAGTGGGAAAAAAAGTTCCCCGAAAGCTAAATGGGAACAGGGATGGGGAACTTTCCCGTCCTCGCCCCTGCCCCCTTAGGCTTTTTTCTTATATTTATTATAATAATTTAATTTTATGTTATTTATTTTATTATATAAATATTATATTTAATTTTCAAGATTAATGGGTCAAAATAATGAATATGTTTGAATTAGTGTAAAAATAATATATGTTTGAATTCTAATAAATTTATATTATATATATGTATAATTTGGTAGATAATTATTTCCTTCAATTTTACATTTTCGAATAATTTCTCTTTGACTTTTAATTGTACACGTGGAACTAATTAATCAAATAAAAGTTAATTATTTAATTAAAACTTTTGCATAATAGTAAAAAAATCAAACGATAAAAATTTTCCACGGGGAATCCAATCCCCGCAAATTCCCTGTGGGATTTCCATGGAGAATTTGGGGGGATGAGGAATGAAATGGGGAACGGAAAAGCCATCCCGCCCCATAACGTCGAAAAAAGCACTCTATAGATACTACAAGACTTTGACATTTCAAACCTTGGGTATGGACTAAAATGCACTTATTATTTCTCTTTCCTTTCCCTTATTCCATCCTTCTTCTTTCCTCTCCTACTTCTTCAAACACTCTACTGAAATCCCCACTCCTTTCCTCTCCTACTTCTTCAAACACTCTACTGAAATCCCCACTCCTTGAACATCCTGTTATGGGTTGATTTAAGGCTAAAGACTCATTCGTCACGTCCCAAGAAATTAGTCGAGCTAAGGAACAGCGCATCGATCGGACAATGGAGGACCACAGACAAAGGTTGGGTAAGAATTGCCAGAGCATAAATCACCATCAATAATGATTTTATGATGATTTGGAAGAAACAGAGACAAAGAGAAGGCTATTCATTTATTGGCCAATCCCATTTCAACATCATCAGAGCATACTATTAAGAAAGAAGAACAGAAATTGAAAACCCACTGATTTTTATAGCCACCATTAAGGCTCACACAAACATCCAAAATGGAAAAAGGAAAATTTTGAAAAACAGAGTATATTCATTGACATTCACACACCTAAGAAACACAAAATGTTTACTTATTTCTGTCTTAATTTGCTTAAAGATAAGATGAAAGAAACTGGAAAATTGAAGGAAAGTGATTGGGAACTCCCGCAAAGGAAATGCAATCTGTATACCATAAAAACAGGGGAAGATGCAAGTGATCAGGAAAAGGCAACGTATCCTCCTCACGTCACTATACGTCACCTTCCTGACGTCAGCTGCTCCTGCTAATTTTGTTAAGCATGAACAAAACACGTGCTTGCATATGTTTATCATATTTTCACATTTTGGTACATCATAGTATTATTGGTTCAAAATCGAAGTTTAATGTATTAAATTAGAAAATTATTATAAATAGAAAAGATATCAAACTATTACCAATATAGGAAAATTTTACTGTTTATTAGTGATAGATTGCGATAGACTTTTATCGTTTTCTATCGCTAACGCTAACGAAGACTATCGTTGATAGACCGTAAAAATAATAGTTTGACTCATTTTCTATATTTGAAAACAACCTTATTAAATTTGTATATTTGTAGTTTATTAGCACTAATTCAAAATTCATTTAAAATATAACTGTTAAAGTAAATTAATATTTTTCCTTTATTAGTTTATTCTTATTTTGTATTTTTCTTTTTTTGGTTTATTTCCTTAGTTGAGTCTTGGTGGAGTCTATTTATTTGTATTCTAAATCAACTAATTATTCAATAATATATACAAATTTCACAATAACATTGGTGGGTCATATTATATCATTAGTCATTAAAAATTCATTCATTCAAAATATAATATTGGTGTATCAATAACTTATCAATATCCATTCAAAATAGTCACCAACAAAACGAATTGAACTATTACAAGTTAATGATAATATTCTAAAAAAAAATTACTTTAAATCAAATGATCAATATAAATTCCAATTAAGATTATGAATAATAACAAAGGCACGAAACACTTATTTGATAGCTAAATTTGGTATATCTAAGGATTAAAATATTGATGTTAATATCGATATTGACAATTAAATTTTATAAATATATCGACAAAATATCAATATTGACGGATATGTCTATCCATCATGAATTTTATAAAATTTATTTAGATTAGTAATTAAATTATTTTTACTCTCAAATTGAGTTATGGATATTGTTATGAGTACTCTTGTTCACATTTAATTAAATAAATGATATTTTTTATGTTTTACAAGCATTAATAAAAAAAACATTAGAGATATCCATAGATATTTAATACTGATATCAAACCCTTCGATTTATGGATATATCGACATATCCACGAATATTTTTATCCTTGGATACATCATCTAACTAATATATCAAACAACCGTTGCTCACTTTGACAAATAGCAGTTAAAATAAAAACTTTTTTTTTTTTGGTGTCGAATTATTTTCTTTCAATTTTATGTTGAAACGTATTTTGTAAGGAGAAAATCTTGCTAACCCTAAATATGTTGATCACCTTATTTATATTCGAGCAAAGTGCATCCCACGTGGGGATGCAGTGCACTTTAATCACACGTACAAAAAAAATTAATTTTCTTTTATTAAAACATAACTAAAATTTTTCGCGTGACAAATTATAATTGACTAGTATACATAAACATAAATAACATGTAATTAAATGTTTTTCCTTTTATAATATTTTTCCTTTTAAATGATATCCATTTTCTTCCCCTTCTCTCCTTAGAACGACAATTGTTATCGGAATCACATATCAACAACAACAAACTTTATAAACTTAGACATCAAACTTGAGAAAAAGAGCAACAGAATCAAAATTATACCATTATGATCTTGTGATGAATTGGAAGAAGAGAGACAAACAGAGATGGGTATTCATTTATAGGCCAAGCCCATTTCAACATCATCAGCGAAAATTGCTAAAACCTTTCTTCCATATCAAAGCATACCATTGAAAAATAAGAACAAAAATTGAAAACCCACTTATTTTTTGTTTACACCAACATCCAAAATGGAAAAAGAAAATTTTTCAAAAAAGAGTATATTAATTCTTATTATCTCCCTTTTAAACGTAAGAACTTTCTAAGACGTGCTGATCGTACTTTTGATGCGAATAAGGCGACTAGCATCTTGAAGTACATCAAAGGTCAACACACTGACCATGGTATACCTCGGAGCAACGTTGATGTTATGTACATGTCTTTCAACCAATCCAAAATTAATTGGGTGCTTGTTTGTGTGAATTTCGAGATTGAAGAGTTAATACTATATGATTCATTGGTTACAATACACTCCAATTACAGACTTGTAATGTGAAAAGAGATCGGTGTGTGAAAACTTGCCCAATCTACTCACTATTGGGGTTATAGAATCTAAAAAGAATCTCCCACTAAGATCAGTGGAGTCTACGTTGAGACGATGCTTCCGTGTCACAACAACATGAAAGTGGTGATTGGGGTATGTTCACATATAAATATCTTGAGTATGATGTAACCAAGGTTCAAAATGGATACACAAAGAAGGATGAACTATTTTCATAAACAATATGCTATTTAGATTTGGGCCAATAGTTTTAGTAAGTAGGTAACTTTTATGTAATCAATTGGTTCATGTGCCATCTAATGGAATGAACAAAATCATGTAAATTCATCAAACTACGGGTGATCATCAGTCCGACGGCATTGGTTTTGGATGGAGATCGATGCTGGCCAAGTGATATTTTCAGTGTTCTCGTCGGTTGGTGTTTGTTGATTTTGACGAAGACAATAATGTCGAGCAACCCTACTGCTCGGCCGGTCAGTCGATTTTTCCGATTCCATGTCTCTCACGACCTAGCTAGAAAAAGCAAACAAAATGCAAAGATAGTCGAAAGCTAAAAATGTAGCAAAACGTTAAAAAATAGAAAATAAGAAAGGAAGAAAAAAACTACGAGAGAAAGAAGAAAAAAAGAATAGGAAAGTAAGAAAAGAAGAAAGAAAAGAGAGAGATGAAGGATGGTGTCCCAAAGAGAAGAAGAGAAAGAGAGTGAAATGAGGGAGAGAGAAATGAATAAGAACATGAAACGATAAAAAGAATGAAAAAGAAATACTTTCAAGACCAACACATGGTTTCACGTTTTCACATGCCTTTTCTTGAATTTCTATGGTTTGGGAGTGTACTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACTCGGTCAGTTTGAGCTTCAACGGACGTGCCGGTCGGCCGGCTGGTTGA

mRNA sequence

ATGGATGTAGCCGTGTTGGAGTCCCAAATTCTAGTTTCTATATCCCAAATTCAAACACATTTGGATGCTAAAGACTCATTCGTCACGTCCCAAGAAATTAGTCGAGCTAAGGAACAGCGCATCGATCGGACAATGGAGGACCACAGACAAAGGTTGGATAAGATGAAAGAAACTGGAAAATTGAAGGAAAGTGATTGGGAACTCCCGCAAAGGAAATGCAATCTGTATACCATAAAAACAGGGGAAGATGCAAGTGATCAGGAAAAGGCAACGTATCCTCCTCACGTCACTATACGTCACCTTCCTGACACATCAAACTTGAGAAAAAGAGCAACAGAATCAAAATTATACCATTATGATCTTGTGATGAATTGGAAGAAGAGAGACAAACAGAGATGGACTTGTAATGTGAAAAGAGATCGATTTGGGCCAATAGTTTTAGTAAGTAGTTTGAGCTTCAACGGACGTGCCGGTCGGCCGGCTGGTTGA

Coding sequence (CDS)

ATGGATGTAGCCGTGTTGGAGTCCCAAATTCTAGTTTCTATATCCCAAATTCAAACACATTTGGATGCTAAAGACTCATTCGTCACGTCCCAAGAAATTAGTCGAGCTAAGGAACAGCGCATCGATCGGACAATGGAGGACCACAGACAAAGGTTGGATAAGATGAAAGAAACTGGAAAATTGAAGGAAAGTGATTGGGAACTCCCGCAAAGGAAATGCAATCTGTATACCATAAAAACAGGGGAAGATGCAAGTGATCAGGAAAAGGCAACGTATCCTCCTCACGTCACTATACGTCACCTTCCTGACACATCAAACTTGAGAAAAAGAGCAACAGAATCAAAATTATACCATTATGATCTTGTGATGAATTGGAAGAAGAGAGACAAACAGAGATGGACTTGTAATGTGAAAAGAGATCGATTTGGGCCAATAGTTTTAGTAAGTAGTTTGAGCTTCAACGGACGTGCCGGTCGGCCGGCTGGTTGA

Protein sequence

MDVAVLESQILVSISQIQTHLDAKDSFVTSQEISRAKEQRIDRTMEDHRQRLDKMKETGKLKESDWELPQRKCNLYTIKTGEDASDQEKATYPPHVTIRHLPDTSNLRKRATESKLYHYDLVMNWKKRDKQRWTCNVKRDRFGPIVLVSSLSFNGRAGRPAG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G015220.1CcUC01G015220.1mRNA