CcUC01G014640 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G014640
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr01: 27434281 .. 27435110 (+)
RNA-Seq Expression	CcUC01G014640
Synteny	CcUC01G014640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAAGAAGAAGAAGAAGAAGAAACAGAGCAGCGATTATGAAACAATGAAATCCTCGCAGTCGCAAGCCAACCATGATCCGAACGGCGAACGAGAGTGAGAAAGATGACAGAGCCACCGCCCAAATGCCAGCCATTGTTATTCAATTCAACCTCTGACCTAAAAACCTAAACACGTTCACGATCGGCCGAAGGAGAAAGTGAAAGTAATCGATTCCTCCTTGTTCTCTTCCATTATGTCCTTTACTTTAATCCTCCAATTCCATTCGTTTGTTTTTGAATCCATCGCTCCATTGAAATTCTCCCACCTGTACAGTTTTGAACCTGTTGCGGGTTGCTCAGGCCCGAAGAAAACCCAAGGCGAAAAGCAATGGTCAGAGCATCGAGTTCCAGAAAGACCAGTTGAGAAGCTGGTAAGTACATATCAACAAGTAACCGAGCTGAGATCTATTTGACACCCAGCAGCCTCTGACCCGTAAACTAACACGGGAAGTCATAATTCTGAATAAATAATCTCCTTTTGCGTGCTTAGTTATATTACTAATTTAGGCATCACAGACTTCTCACCTTAGCTGATTTAAGGATTTAGAGAGTTCTACCTTCACTTTTATGTGCTCCCTAAATTACTAGTTTAAGTATTGGAGAGCTCTAACCTTGCCCTTGCTTTATTGCTTTTGTATGCTTAATTGAGTTACTAACTTAGGCTCAGGTCAACTCAAAAAAATGAGATTAGACCGGTAAAAGTGAGTCGAAGGTCTAAGTCCATAGAAAACCCAGAACTTGATGAAAAATGGAGATTCAAATCAATGGCAATTGACACCATTAACAGGT

mRNA sequence

AACAAAGAAGAAGAAGAAGAAGAAACAGAGCAGCGATTATGAAACAATGAAATCCTCGCAGTCGCAAGCCAACCATGATCCGAACGGCGAACGAGATTTTGAACCTGTTGCGGGTTGCTCAGGCCCGAAGAAAACCCAAGGCGAAAAGCAATGGTCAGAGCATCGAGTTCCAGAAAGACCAGTTGAGAAGCTGGTAAGTACATATCAACAAGTAACCGAGCTGAGATCTATTTGACACCCAGCAGCCTCTGACCCGTAAACTAACACGGGAAGTCATAATTCTGAATAAATAATCTCCTTTTGCGTGCTTAGTTATATTACTAATTTAGGCATCACAGACTTCTCACCTTAGCTGATTTAAGGATTTAGAGAGTTCTACCTTCACTTTTATGTGCTCCCTAAATTACTAGTTTAAGTATTGGAGAGCTCTAACCTTGCCCTTGCTTTATTGCTTTTGTATGCTTAATTGAGTTACTAACTTAGGCTCAGGTCAACTCAAAAAAATGAGATTAGACCGGTAAAAGTGAGTCGAAGGTCTAAGTCCATAGAAAACCCAGAACTTGATGAAAAATGGAGATTCAAATCAATGGCAATTGACACCATTAACAGGT

Coding sequence (CDS)

ATGAAATCCTCGCAGTCGCAAGCCAACCATGATCCGAACGGCGAACGAGATTTTGAACCTGTTGCGGGTTGCTCAGGCCCGAAGAAAACCCAAGGCGAAAAGCAATGGTCAGAGCATCGAGTTCCAGAAAGACCAGTTGAGAAGCTGGTAAGTACATATCAACAAGTAACCGAGCTGAGATCTATTTGA

Protein sequence

MKSSQSQANHDPNGERDFEPVAGCSGPKKTQGEKQWSEHRVPERPVEKLVSTYQQVTELRSI

Homology

The following BLAST results are available for this feature:

BLAST of CcUC01G014640 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC01G014640 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC01G014640 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC01G014640 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G014640.1	CcUC01G014640.1	mRNA