CcUC01G014570 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G014570
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCicolChr01: 27334021 .. 27335796 (-)
RNA-Seq ExpressionCcUC01G014570
SyntenyCcUC01G014570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCTTTATTTTCATCTCGTTCGCCCATTCATTTTTAATTCAAAATCCACCAAATTACAACATTCAATAGCTTTGAGAATTTCTCACAAGTCTTTCATTTCGATATCGGACAACTCCTCGGTGAAGCTAGAAGATTTCTATGCCAGTCTTTTGAATCGGTGTGTTCAGACCTCCGATTCCCGCCATGGATCTGCAATTCATGCGAAGTTCCTCAAAGGCTTTCTTCCATTTTCTCTTTTCTTCCACAATCACGTACTTAATTTGTATGTCAAATGTGGCGGTCTATCATATGGCCTGCAACTGTTCGACGAAATGCCTGAGAGAAATGTTGTGTCCTGGTCTGCAATCATTGCTGGGTTCGTTCAACATGGACGACCCAACGAAGCTCTCTCTCTATTTGGCCGTATGCATTGCGATGGCACGATAATGCCCAACGAATTCACCCTTGTAAGTGCCCTCCATGCTTGTTCTTTTACTCAGAGGCTGATATGTCCATACCAAATTTATTCATTAATTGTTCGCTTAGGATATGGGTCGAATGTTTTCCTCATGAATGCGTTCTTAACCGCTTTAATTAGGCATGAGAAATTGCTAGAGGCTTTAGAAGTTTTCGAGAGTTTTTCTTCCAAAGACACTGTATCTTGGAATGCCATGATGGCTGGTTATTTGCAATTAGCATATTTTGAACTGCCGAAGTTTTGGCGCAGGATGAATCTCGAGGGCGTTAAGCCTGATAATTTTACATTTGCTAGTATCTTAACTGGGTTGGCTGCTCTCTCTGAATTTAGGCTGGGGTTGCAAGTTCATGGACAGCTTGTGAAAGCTGGATATGGGAATGATATTTGTGTAGGGAATTCCTTGTGTGATATGTACATTAAGAACCAGAAGTTGTTAGACGGTTTTAAAGCTTTTGATGAAATGCCTTCAAGTGATGTGTGTTCTTGGACCCAAATGGCTGCAGGTTGCCTCCAGTGTGGGGAACCAATGAAAGCACTCGAGGTTGTTTACGAGATGAAAAATGTTGGCGTGAGGCTAAATAAGTTCACCCTTGCAACTGCCTTGAATGCTTGTGCCAATTTGGCCTCCATGGAAGAAGGAAAGAAATTCCATGGATTGAGAATTAAACTTGGAACTGATATTGATGTTTGTGTTGATAATGCTCTACTTGATATGTATGCAAAATGTGGATGTATGGCCAGTGCAAATGTCGTCTTTCGTTCAATGGATGAACGATCTGTCGTCTCGTGGACTACGATGATTATGGGATTTGCACATAATGGCCAAGCAAGAGAAGCCCTTCAAATCTTTGATGAAATGAGAAAAGGGGAAGCTGAACCTAACCACATCACTTTTATTTGTGTTCTTTATGCCTGTAGCCAAGGAGGTTTTGTTGATGAAGCATGGAAATACTTCTCTTCCATGAGTGCTGACCATGGGATTTCACCTTCAGAAGATCATTATGTGTGTATGGTGAATCTATTAGGCCGAGCTGGATGTATAAAAGAAGCCGAGGATTTGATCCTACAAATGCCATTTCGACCTGGTTCGTTGGTCTGGCAAACATTGCTCGGTGCTTGCTTAGTTCATGGCGACTTAGAGACAGGAAAACGAGCAGCTGACCGTTCGTTGAATTTGGATCGAAACGATCCATCGACTTATGTTTTGTTATCAAACATGCTTGCTGGTGGTAATAACTGGGACAGTGTTGGAAGTTTGAGAGAACTAATGGAAACTAGAGATGTAAAGAAAGTACCTGGATCAAGTTGGATGTAA

mRNA sequence

ATGCCTCTTTATTTTCATCTCGTTCGCCCATTCATTTTTAATTCAAAATCCACCAAATTACAACATTCAATAGCTTTGAGAATTTCTCACAAGTCTTTCATTTCGATATCGGACAACTCCTCGGTGAAGCTAGAAGATTTCTATGCCAGTCTTTTGAATCGGTGTGTTCAGACCTCCGATTCCCGCCATGGATCTGCAATTCATGCGAAGTTCCTCAAAGGCTTTCTTCCATTTTCTCTTTTCTTCCACAATCACGTACTTAATTTGTATGTCAAATGTGGCGGTCTATCATATGGCCTGCAACTGTTCGACGAAATGCCTGAGAGAAATGTTGTGTCCTGGTCTGCAATCATTGCTGGGTTCGTTCAACATGGACGACCCAACGAAGCTCTCTCTCTATTTGGCCGTATGCATTGCGATGGCACGATAATGCCCAACGAATTCACCCTTGTAAGTGCCCTCCATGCTTGTTCTTTTACTCAGAGGCTGATATGTCCATACCAAATTTATTCATTAATTGTTCGCTTAGGATATGGGTCGAATGTTTTCCTCATGAATGCGTTCTTAACCGCTTTAATTAGGCATGAGAAATTGCTAGAGGCTTTAGAAGTTTTCGAGAGTTTTTCTTCCAAAGACACTGTATCTTGGAATGCCATGATGGCTGGTTATTTGCAATTAGCATATTTTGAACTGCCGAAGTTTTGGCGCAGGATGAATCTCGAGGGCGTTAAGCCTGATAATTTTACATTTGCTAGTATCTTAACTGGGTTGGCTGCTCTCTCTGAATTTAGGCTGGGGTTGCAAGTTCATGGACAGCTTGTGAAAGCTGGATATGGGAATGATATTTGTGTAGGGAATTCCTTGTGTGATATGTACATTAAGAACCAGAAGTTGTTAGACGGTTTTAAAGCTTTTGATGAAATGCCTTCAAGTGATGTGTGTTCTTGGACCCAAATGGCTGCAGGTTGCCTCCAGTGTGGGGAACCAATGAAAGCACTCGAGGTTGTTTACGAGATGAAAAATGTTGGCGTGAGGCTAAATAAGTTCACCCTTGCAACTGCCTTGAATGCTTGTGCCAATTTGGCCTCCATGGAAGAAGGAAAGAAATTCCATGGATTGAGAATTAAACTTGGAACTGATATTGATGTTTGTGTTGATAATGCTCTACTTGATATGTATGCAAAATGTGGATGTATGGCCAGTGCAAATGTCGTCTTTCGTTCAATGGATGAACGATCTGTCGTCTCGTGGACTACGATGATTATGGGATTTGCACATAATGGCCAAGCAAGAGAAGCCCTTCAAATCTTTGATGAAATGAGAAAAGGGGAAGCTGAACCTAACCACATCACTTTTATTTGTGTTCTTTATGCCTGTAGCCAAGGAGGTTTTGTTGATGAAGCATGGAAATACTTCTCTTCCATGAGTGCTGACCATGGGATTTCACCTTCAGAAGATCATTATGTGTGTATGGTGAATCTATTAGGCCGAGCTGGATGTATAAAAGAAGCCGAGGATTTGATCCTACAAATGCCATTTCGACCTGGTTCGTTGGTCTGGCAAACATTGCTCGGTGCTTGCTTAGTTCATGGCGACTTAGAGACAGGAAAACGAGCAGCTGACCGTTCGTTGAATTTGGATCGAAACGATCCATCGACTTATGTTTTGTTATCAAACATGCTTGCTGGTGGTAATAACTGGGACAGTGTTGGAAGTTTGAGAGAACTAATGGAAACTAGAGATGTAAAGAAAGTACCTGGATCAAGTTGGATGTAA

Coding sequence (CDS)

ATGCCTCTTTATTTTCATCTCGTTCGCCCATTCATTTTTAATTCAAAATCCACCAAATTACAACATTCAATAGCTTTGAGAATTTCTCACAAGTCTTTCATTTCGATATCGGACAACTCCTCGGTGAAGCTAGAAGATTTCTATGCCAGTCTTTTGAATCGGTGTGTTCAGACCTCCGATTCCCGCCATGGATCTGCAATTCATGCGAAGTTCCTCAAAGGCTTTCTTCCATTTTCTCTTTTCTTCCACAATCACGTACTTAATTTGTATGTCAAATGTGGCGGTCTATCATATGGCCTGCAACTGTTCGACGAAATGCCTGAGAGAAATGTTGTGTCCTGGTCTGCAATCATTGCTGGGTTCGTTCAACATGGACGACCCAACGAAGCTCTCTCTCTATTTGGCCGTATGCATTGCGATGGCACGATAATGCCCAACGAATTCACCCTTGTAAGTGCCCTCCATGCTTGTTCTTTTACTCAGAGGCTGATATGTCCATACCAAATTTATTCATTAATTGTTCGCTTAGGATATGGGTCGAATGTTTTCCTCATGAATGCGTTCTTAACCGCTTTAATTAGGCATGAGAAATTGCTAGAGGCTTTAGAAGTTTTCGAGAGTTTTTCTTCCAAAGACACTGTATCTTGGAATGCCATGATGGCTGGTTATTTGCAATTAGCATATTTTGAACTGCCGAAGTTTTGGCGCAGGATGAATCTCGAGGGCGTTAAGCCTGATAATTTTACATTTGCTAGTATCTTAACTGGGTTGGCTGCTCTCTCTGAATTTAGGCTGGGGTTGCAAGTTCATGGACAGCTTGTGAAAGCTGGATATGGGAATGATATTTGTGTAGGGAATTCCTTGTGTGATATGTACATTAAGAACCAGAAGTTGTTAGACGGTTTTAAAGCTTTTGATGAAATGCCTTCAAGTGATGTGTGTTCTTGGACCCAAATGGCTGCAGGTTGCCTCCAGTGTGGGGAACCAATGAAAGCACTCGAGGTTGTTTACGAGATGAAAAATGTTGGCGTGAGGCTAAATAAGTTCACCCTTGCAACTGCCTTGAATGCTTGTGCCAATTTGGCCTCCATGGAAGAAGGAAAGAAATTCCATGGATTGAGAATTAAACTTGGAACTGATATTGATGTTTGTGTTGATAATGCTCTACTTGATATGTATGCAAAATGTGGATGTATGGCCAGTGCAAATGTCGTCTTTCGTTCAATGGATGAACGATCTGTCGTCTCGTGGACTACGATGATTATGGGATTTGCACATAATGGCCAAGCAAGAGAAGCCCTTCAAATCTTTGATGAAATGAGAAAAGGGGAAGCTGAACCTAACCACATCACTTTTATTTGTGTTCTTTATGCCTGTAGCCAAGGAGGTTTTGTTGATGAAGCATGGAAATACTTCTCTTCCATGAGTGCTGACCATGGGATTTCACCTTCAGAAGATCATTATGTGTGTATGGTGAATCTATTAGGCCGAGCTGGATGTATAAAAGAAGCCGAGGATTTGATCCTACAAATGCCATTTCGACCTGGTTCGTTGGTCTGGCAAACATTGCTCGGTGCTTGCTTAGTTCATGGCGACTTAGAGACAGGAAAACGAGCAGCTGACCGTTCGTTGAATTTGGATCGAAACGATCCATCGACTTATGTTTTGTTATCAAACATGCTTGCTGGTGGTAATAACTGGGACAGTGTTGGAAGTTTGAGAGAACTAATGGAAACTAGAGATGTAAAGAAAGTACCTGGATCAAGTTGGATGTAA

Protein sequence

MPLYFHLVRPFIFNSKSTKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNLEGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLDGFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACANLASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTMIMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAADRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM
Homology
[Close]
BLAST of CcUC01G014570 vs. NCBI nr
Match: XP_038894950.1 (pentatricopeptide repeat-containing protein At4g33170-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1146.3 bits (2964), Expect = 0.0e+00
Identity = 553/591 (93.57%), Postives = 571/591 (96.62%), Query Frame = 0 

Query: 1   MPLYFHLVRPFIFNSKSTKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSD 60
           MPL FHLVRP  FNSKSTK+QHSIALRISHKSFIS S+NSS +LEDFY SLL+RCVQT+D
Sbjct: 1   MPLCFHLVRPLFFNSKSTKIQHSIALRISHKSFISKSENSSGELEDFYVSLLHRCVQTTD 60

Query: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAG 120
           SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCG LSYGLQLFDEMPERNVVSWSAII G
Sbjct: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGRLSYGLQLFDEMPERNVVSWSAIIVG 120

Query: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGS 180
           FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACS TQRLIC YQIY+LIVRLGYGS
Sbjct: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYALIVRLGYGS 180

Query: 181 NVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240
           NVFLMNAFLTALIRHEKLLEALEVFES SSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL
Sbjct: 181 NVFLMNAFLTALIRHEKLLEALEVFESCSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240

Query: 241 EGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLD 300
           EGVKPDNFTFAS+ TGLAALSEFRLGLQVHGQLVK GYG+DICVGNSLCDMYIKNQKLLD
Sbjct: 241 EGVKPDNFTFASVFTGLAALSEFRLGLQVHGQLVKCGYGSDICVGNSLCDMYIKNQKLLD 300

Query: 301 GFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACAN 360
           GFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALE++YEMKNVG+ LNKFTLATALNACAN
Sbjct: 301 GFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEIIYEMKNVGLSLNKFTLATALNACAN 360

Query: 361 LASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTM 420
           LASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCM SANVVFRSMDERSVVSWTTM
Sbjct: 361 LASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTM 420

Query: 421 IMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHG 480
           IMGFAHN Q +EALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSAD+G
Sbjct: 421 IMGFAHNSQTKEALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADYG 480

Query: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAA 540
           ISPSEDHYVCMVNLLGRAGCIKEAEDLIL+MPFRPGSLVWQTLLGACLVHGDLETGKRAA
Sbjct: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLILRMPFRPGSLVWQTLLGACLVHGDLETGKRAA 540

Query: 541 DRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM 592
           + +LNLDRNDPSTYVLLSNM AGG+NWD+V SLRELMETRDVKKVPGSSWM
Sbjct: 541 EHALNLDRNDPSTYVLLSNMFAGGSNWDNVRSLRELMETRDVKKVPGSSWM 591

[Close]
BLAST of CcUC01G014570 vs. NCBI nr
Match: XP_008467246.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >XP_016903099.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >XP_016903114.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo])

HSP 1 Score: 1135.2 bits (2935), Expect = 0.0e+00
Identity = 548/591 (92.72%), Postives = 566/591 (95.77%), Query Frame = 0 

Query: 1   MPLYFHLVRPFIFNSKSTKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSD 60
           MPL FHL RP I  SKST LQ SIALRISHKSFIS S++SSVKLEDFY S L RCVQTSD
Sbjct: 1   MPLCFHLARPLILISKSTDLQKSIALRISHKSFISKSEDSSVKLEDFYVSFLQRCVQTSD 60

Query: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAG 120
           SRHGSAIHAKFLKGFLPFSLFFHNHVLNLY+KCG LSYGLQLFDEMPERNVVSWSAIIAG
Sbjct: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYLKCGRLSYGLQLFDEMPERNVVSWSAIIAG 120

Query: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGS 180
           FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACS TQRLIC YQIY+ IVRLGYGS
Sbjct: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGS 180

Query: 181 NVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240
           NVFLMNAFLTALIRHEKLLEALEVFES  SKDTVSWNAMMAGYLQLAYFELPKFWRRMNL
Sbjct: 181 NVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240

Query: 241 EGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLD 300
           E VKPDNFTFASILTGLAALSEFRLGLQVHGQLVK+GYGNDICVGNSLCDMYIKNQKLLD
Sbjct: 241 ESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYIKNQKLLD 300

Query: 301 GFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACAN 360
           GFKAFDEM SSDVCSWTQMA+GCLQCGEPMKALEV+YEMKNVGVRLNKFTLATALN+CAN
Sbjct: 301 GFKAFDEMSSSDVCSWTQMASGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCAN 360

Query: 361 LASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTM 420
           LAS+EEGKKFHGLRIKLGTD+DVCVDNALLDMYAKCGCM SANVVFRSMDERSVVSWTTM
Sbjct: 361 LASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTM 420

Query: 421 IMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHG 480
           IMGFAHNGQ +EALQIFDEMRKGEAEPNHITFICVL ACSQGGF+DEAWKYFSSMSADHG
Sbjct: 421 IMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHG 480

Query: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAA 540
           I+PSEDHYVCMVNLLGRAGCIKEAEDLILQMPF+PGSLVWQTLLGACLVHGD+ETGKRAA
Sbjct: 481 IAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAA 540

Query: 541 DRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM 592
           + +LNLDRNDPSTY+LLSNM AGGNNWD VGSLRELMETRDVKKVPGSSWM
Sbjct: 541 EHALNLDRNDPSTYILLSNMFAGGNNWDGVGSLRELMETRDVKKVPGSSWM 591

[Close]
BLAST of CcUC01G014570 vs. NCBI nr
Match: XP_011650978.1 (putative pentatricopeptide repeat-containing protein At3g15130 [Cucumis sativus] >KGN64206.1 hypothetical protein Csa_013410 [Cucumis sativus])

HSP 1 Score: 1127.1 bits (2914), Expect = 0.0e+00
Identity = 544/591 (92.05%), Postives = 562/591 (95.09%), Query Frame = 0 

Query: 1   MPLYFHLVRPFIFNSKSTKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSD 60
           MPL FHL RP    SKST LQ SIALRIS KSF+S S+NSSVKLEDFY S L RCV TSD
Sbjct: 1   MPLCFHLARPLFLISKSTDLQKSIALRISRKSFVSKSENSSVKLEDFYVSFLQRCVLTSD 60

Query: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAG 120
           SRHGSAIHAKFLKGFLPFSLFFHNHVLN YVKCG LSYGLQLFDEMPERNVVSWSAIIAG
Sbjct: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAG 120

Query: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGS 180
           FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACS TQRLIC YQIY+ IVRLGYGS
Sbjct: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGS 180

Query: 181 NVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240
           NVFLMNAFLTALIRHEKLLEALEVFES  SKDTVSWNAMMAGYLQLAYFELPKFWRRMNL
Sbjct: 181 NVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240

Query: 241 EGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLD 300
           E VKPDNFTFASILTGLAALSEFRLGLQVHGQLVK+GYGNDICVGNSLCDMY+KNQKLLD
Sbjct: 241 ESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLD 300

Query: 301 GFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACAN 360
           GFKAFDEM SSDVCSWTQMAAGCLQCGEPMKALEV+YEMKNVGVRLNKFTLATALN+CAN
Sbjct: 301 GFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCAN 360

Query: 361 LASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTM 420
           LAS+EEGKKFHGLRIKLGTD+DVCVDNALLDMYAKCGCM SANVVFRSMDERSVVSWTTM
Sbjct: 361 LASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTM 420

Query: 421 IMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHG 480
           IMGFAHNGQ +EALQIFDEMRKGEAEPNHITFICVL ACSQGGF+DEAWKYFSSMSADHG
Sbjct: 421 IMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHG 480

Query: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAA 540
           I+PSEDHYVCMVNLLGRAGCIKEAEDLILQMPF+PGSLVWQTLLGACLVHGD+ETGKRAA
Sbjct: 481 IAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAA 540

Query: 541 DRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM 592
           + +LNLDRNDPSTY+LLSNM AGG+NWDSVG LRELMETRDVKKVPGSSWM
Sbjct: 541 EHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKKVPGSSWM 591

[Close]
BLAST of CcUC01G014570 vs. NCBI nr
Match: TYJ99062.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 530/567 (93.47%), Postives = 549/567 (96.83%), Query Frame = 0 

Query: 25  ALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHN 84
           +LRISHKSFIS S++SSVKLEDFY S L RCVQTSDSRHGSAIHAKFLKGFLPFSLFFHN
Sbjct: 152 SLRISHKSFISKSEDSSVKLEDFYVSFLQRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHN 211

Query: 85  HVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIM 144
           HVLNLY+KCG LSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIM
Sbjct: 212 HVLNLYLKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIM 271

Query: 145 PNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGSNVFLMNAFLTALIRHEKLLEALEV 204
           PNEFTLVSALHACS TQRLIC YQIY+ IVRLGYGSNVFLMNAFLTALIRHEKLLEALEV
Sbjct: 272 PNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEV 331

Query: 205 FESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNLEGVKPDNFTFASILTGLAALSEFR 264
           FES  SKDTVSWNAMMAGYLQLAYFELPKFWRRMNLE VKPDNFTFASILTGLAALSEFR
Sbjct: 332 FESCLSKDTVSWNAMMAGYLQLAYFELPKFWRRMNLESVKPDNFTFASILTGLAALSEFR 391

Query: 265 LGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLDGFKAFDEMPSSDVCSWTQMAAGCL 324
           LGLQVHGQLVK+GYGNDICVGNSLCDMYIKNQKLLDGFKAFDEM SSDVCSWTQMA+GCL
Sbjct: 392 LGLQVHGQLVKSGYGNDICVGNSLCDMYIKNQKLLDGFKAFDEMSSSDVCSWTQMASGCL 451

Query: 325 QCGEPMKALEVVYEMKNVGVRLNKFTLATALNACANLASMEEGKKFHGLRIKLGTDIDVC 384
           QCGEPMKALEV+YEMKNVGVRLNKFTLATALN+CANLAS+EEGKKFHGLRIKLGTD+DVC
Sbjct: 452 QCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVC 511

Query: 385 VDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTMIMGFAHNGQAREALQIFDEMRKGE 444
           VDNALLDMYAKCGCM SANVVFRSMDERSVVSWTTMIMGFAHNGQ +EALQIFDEMRKGE
Sbjct: 512 VDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGE 571

Query: 445 AEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRAGCIKEA 504
           AEPNHITFICVL ACSQGGF+DEAWKYFSSMSADHGI+PSEDHYVCMVNLLGRAGCIKEA
Sbjct: 572 AEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEA 631

Query: 505 EDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAADRSLNLDRNDPSTYVLLSNMLAGG 564
           EDLILQMPF+PGSLVWQTLLGACLVHGD+ETGKRAA+ +LNLDRNDPSTY+LLSNM AGG
Sbjct: 632 EDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGG 691

Query: 565 NNWDSVGSLRELMETRDVKKVPGSSWM 592
           NNWD VGSLRELMETRDVKKVPGSSWM
Sbjct: 692 NNWDGVGSLRELMETRDVKKVPGSSWM 718

[Close]
BLAST of CcUC01G014570 vs. NCBI nr
Match: KAG7012171.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1100.1 bits (2844), Expect = 0.0e+00
Identity = 530/591 (89.68%), Postives = 561/591 (94.92%), Query Frame = 0 

Query: 1   MPLYFHLVRPFIFNSKSTKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSD 60
           MPL  H+VRP IF SK TK +HSIALRISHKSFIS S+ SSVKLEDFY +LL+RCVQTSD
Sbjct: 1   MPL--HIVRPLIFVSKLTKSRHSIALRISHKSFISKSEISSVKLEDFYVNLLHRCVQTSD 60

Query: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAG 120
           SRHGSAIHAKFLKGFLP+SLFFHNHVLN YVKCG LS GLQLFDEMPERNVVSWSA+IAG
Sbjct: 61  SRHGSAIHAKFLKGFLPYSLFFHNHVLNFYVKCGSLSCGLQLFDEMPERNVVSWSAVIAG 120

Query: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGS 180
           FVQHGRPNEALSLF RMHCDGTI+PNEFTLVSALHACS TQRLIC YQIY+L++RLGYGS
Sbjct: 121 FVQHGRPNEALSLFSRMHCDGTIIPNEFTLVSALHACSLTQRLICSYQIYALVLRLGYGS 180

Query: 181 NVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240
           N+FLMNAFLTALIRHEKLL+ALEVFES SSKD VSWNAMMAGYLQLAY ELPKFWRRMNL
Sbjct: 181 NIFLMNAFLTALIRHEKLLDALEVFESSSSKDIVSWNAMMAGYLQLAYLELPKFWRRMNL 240

Query: 241 EGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLD 300
           E +KPDNFTFASILTGLAALSEF+LGLQVHGQLVK+GYGNDICVGNSLCDMYIKNQKLLD
Sbjct: 241 EDIKPDNFTFASILTGLAALSEFKLGLQVHGQLVKSGYGNDICVGNSLCDMYIKNQKLLD 300

Query: 301 GFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACAN 360
           GFKAFDEMPSSDVCSWTQMAAGCL CGEPMKALEV+Y+MKN+GVRLNKFTLATALNA AN
Sbjct: 301 GFKAFDEMPSSDVCSWTQMAAGCLHCGEPMKALEVIYDMKNIGVRLNKFTLATALNASAN 360

Query: 361 LASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTM 420
           LAS+EEGKKFHGLRIKLG DIDVCVDNALLDMYAKCGCM+SANVVFRSMDE+SVVSWTTM
Sbjct: 361 LASIEEGKKFHGLRIKLGADIDVCVDNALLDMYAKCGCMSSANVVFRSMDEQSVVSWTTM 420

Query: 421 IMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHG 480
           IMGFAHNGQA+EALQIFDEMRK  AEPNHITFICVLYACSQGGF+DEAWKYFSSMSADHG
Sbjct: 421 IMGFAHNGQAKEALQIFDEMRKEGAEPNHITFICVLYACSQGGFIDEAWKYFSSMSADHG 480

Query: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAA 540
           ISPSEDHYVCMVNLLGRAGCIKEAEDLI +MPF+PGSLVWQTLLGACLVHGD+ETGKRAA
Sbjct: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLIRRMPFKPGSLVWQTLLGACLVHGDVETGKRAA 540

Query: 541 DRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM 592
           + +LNLD+NDPSTYVLLSNM AG +NWD VGSLRELMETRDVKKVPG SWM
Sbjct: 541 EHALNLDQNDPSTYVLLSNMFAGRSNWDGVGSLRELMETRDVKKVPGFSWM 589

[Close]
BLAST of CcUC01G014570 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.0e-105
Identity = 218/633 (34.44%), Postives = 336/633 (53.08%), Query Frame = 0 

Query: 31  KSFISI-SDNSSVKLEDFYASLLNRCVQTSDSR-HGSAIHAKFLKGFLPFSLFFHNHVLN 90
           KSF+ + +D SS      +A LL+ C+++  S  +   +HA  +K      +F  N +++
Sbjct: 4   KSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLID 63

Query: 91  LYVKCGGLSYGLQLFDEMPERNVVSWSAI------------------------------- 150
            Y KCG L  G Q+FD+MP+RN+ +W+++                               
Sbjct: 64  AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123

Query: 151 IAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLG 210
           ++GF QH R  EAL  F  MH +G ++ NE++  S L ACS    +    Q++SLI +  
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVL-NEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 183

Query: 211 YGSNVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLA-YFELPKFWR 270
           + S+V++ +A +    +   + +A  VF+    ++ VSWN+++  + Q     E    ++
Sbjct: 184 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 243

Query: 271 RMNLEGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAG-YGNDICVGNSLCDMYIKN 330
            M    V+PD  T AS+++  A+LS  ++G +VHG++VK     NDI + N+  DMY K 
Sbjct: 244 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 303

Query: 331 QKLLDGFKAFDEMP-------------------------------SSDVCSWTQMAAGCL 390
            ++ +    FD MP                                 +V SW  + AG  
Sbjct: 304 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 363

Query: 391 QCGEPMKALEVVYEMKNVGVRLNKFTLATALNACANLASMEEGKKF------HGLRIKLG 450
           Q GE  +AL +   +K   V    ++ A  L ACA+LA +  G +       HG + + G
Sbjct: 364 QNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSG 423

Query: 451 TDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTMIMGFAHNGQAREALQIFD 510
            + D+ V N+L+DMY KCGC+    +VFR M ER  VSW  MI+GFA NG   EAL++F 
Sbjct: 424 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 483

Query: 511 EMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRA 570
           EM +   +P+HIT I VL AC   GFV+E   YFSSM+ D G++P  DHY CMV+LLGRA
Sbjct: 484 EMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 543

Query: 571 GCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAADRSLNLDRNDPSTYVLLS 592
           G ++EA+ +I +MP +P S++W +LL AC VH ++  GK  A++ L ++ ++   YVLLS
Sbjct: 544 GFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLS 603

[Close]
BLAST of CcUC01G014570 vs. ExPASy Swiss-Prot
Match: Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.0e-102
Identity = 207/587 (35.26%), Postives = 327/587 (55.71%), Query Frame = 0 

Query: 8   VRPFIFNSKS-TKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSDSRHGSA 67
           V   IF +K  ++  HS       K F  + ++     +  +  +L   V+      G  
Sbjct: 277 VSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ 336

Query: 68  IHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAGFVQHGR 127
           +H   LK  L   L   N ++N+Y K     +   +FD M ER+++SW+++IAG  Q+G 
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396

Query: 128 PNEALSLFGRMHCDGTIMPNEFTLVSALHAC-SFTQRLICPYQIYSLIVRLGYGSNVFLM 187
             EA+ LF ++   G + P+++T+ S L A  S  + L    Q++   +++   S+ F+ 
Sbjct: 397 EVEAVCLFMQLLRCG-LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 456

Query: 188 NAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQL-AYFELPKFWRRMNLEGVK 247
            A + A  R+  + EA  +FE  +  D V+WNAMMAGY Q     +  K +  M+ +G +
Sbjct: 457 TALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 516

Query: 248 PDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLDGFKA 307
            D+FT A++      L     G QVH   +K+GY  D+ V + + DMY+K   +     A
Sbjct: 517 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 576

Query: 308 FDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACANLASM 367
           FD +P  D  +WT M +GC++ GE  +A  V  +M+ +GV  ++FT+AT   A + L ++
Sbjct: 577 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 636

Query: 368 EEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTMIMGF 427
           E+G++ H   +KL    D  V  +L+DMYAKCG +  A  +F+ ++  ++ +W  M++G 
Sbjct: 637 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 696

Query: 428 AHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHGISPS 487
           A +G+ +E LQ+F +M+    +P+ +TFI VL ACS  G V EA+K+  SM  D+GI P 
Sbjct: 697 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 756

Query: 488 EDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAADRSL 547
            +HY C+ + LGRAG +K+AE+LI  M     + +++TLL AC V GD ETGKR A + L
Sbjct: 757 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL 816

Query: 548 NLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM 592
            L+  D S YVLLSNM A  + WD +   R +M+   VKK PG SW+
Sbjct: 817 ELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861

[Close]
BLAST of CcUC01G014570 vs. ExPASy Swiss-Prot
Match: Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 7.6e-101
Identity = 211/569 (37.08%), Postives = 313/569 (55.01%), Query Frame = 0 

Query: 29  SHKSFISISD--NSSVKLEDF-YASLLNRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHNH 88
           SHK      D  +S   ++DF + SLL+ C  + D   GS  H+  +K  L  +LF  N 
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468

Query: 89  VLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMP 148
           ++++Y KCG L    Q+F+ M +R+ V+W+ II  +VQ    +EA  LF RM+  G I+ 
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG-IVS 528

Query: 149 NEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVF 208
           +   L S L AC+    L    Q++ L V+ G   ++   ++ +    +   + +A +VF
Sbjct: 529 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 588

Query: 209 ESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNLEGVKPDNFTFASILTGLAALSEFRL 268
            S      VS NA++AGY Q    E    ++ M   GV P   TFA+I+          L
Sbjct: 589 SSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 648

Query: 269 GLQVHGQLVKAGYGND-ICVGNSLCDMYIKNQKLLDGFKAFDEMPS-SDVCSWTQMAAGC 328
           G Q HGQ+ K G+ ++   +G SL  MY+ ++ + +    F E+ S   +  WT M +G 
Sbjct: 649 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 708

Query: 329 LQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACANLASMEEGKKFHGLRIKLGTDIDV 388
            Q G   +AL+   EM++ GV  ++ T  T L  C+ L+S+ EG+  H L   L  D+D 
Sbjct: 709 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 768

Query: 389 CVDNALLDMYAKCGCMASANVVFRSMDERS-VVSWTTMIMGFAHNGQAREALQIFDEMRK 448
              N L+DMYAKCG M  ++ VF  M  RS VVSW ++I G+A NG A +AL+IFD MR+
Sbjct: 769 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 828

Query: 449 GEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRAGCIK 508
               P+ ITF+ VL ACS  G V +  K F  M   +GI    DH  CMV+LLGR G ++
Sbjct: 829 SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQ 888

Query: 509 EAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAADRSLNLDRNDPSTYVLLSNMLA 568
           EA+D I     +P + +W +LLGAC +HGD   G+ +A++ + L+  + S YVLLSN+ A
Sbjct: 889 EADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYA 948

Query: 569 GGNNWDSVGSLRELMETRDVKKVPGSSWM 592
               W+   +LR++M  R VKKVPG SW+
Sbjct: 949 SQGCWEKANALRKVMRDRGVKKVPGYSWI 976

[Close]
BLAST of CcUC01G014570 vs. ExPASy Swiss-Prot
Match: P0C898 (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H86 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.1e-99
Identity = 187/548 (34.12%), Postives = 304/548 (55.47%), Query Frame = 0 

Query: 50  SLLNRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPER 109
           S+L  C +   S  G  +H   LK     +L   N+++++Y KC       ++FD MPER
Sbjct: 11  SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70

Query: 110 NVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQI 169
           NVVSWSA+++G V +G    +LSLF  M   G I PNEFT  + L AC     L    QI
Sbjct: 71  NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQI 130

Query: 170 YSLIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAY- 229
           +   +++G+   V + N+ +    +  ++ EA +VF     +  +SWNAM+AG++   Y 
Sbjct: 131 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 190

Query: 230 ---FELPKFWRRMNLEGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGY--GNDIC 289
               +     +  N++  +PD FT  S+L   ++      G Q+HG LV++G+   +   
Sbjct: 191 SKALDTFGMMQEANIK-ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 250

Query: 290 VGNSLCDMYIKNQKLLDGFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVG 349
           +  SL D+Y+K   L    KAFD++    + SW+ +  G  Q GE ++A+ +   ++ + 
Sbjct: 251 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 310

Query: 350 VRLNKFTLATALNACANLASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASAN 409
            +++ F L++ +   A+ A + +GK+   L +KL + ++  V N+++DMY KCG +  A 
Sbjct: 311 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 370

Query: 410 VVFRSMDERSVVSWTTMIMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGG 469
             F  M  + V+SWT +I G+  +G  +++++IF EM +   EP+ + ++ VL ACS  G
Sbjct: 371 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 430

Query: 470 FVDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTL 529
            + E  + FS +   HGI P  +HY C+V+LLGRAG +KEA+ LI  MP +P   +WQTL
Sbjct: 431 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 490

Query: 530 LGACLVHGDLETGKRAADRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVK 589
           L  C VHGD+E GK      L +D  +P+ YV++SN+      W+  G+ REL   + +K
Sbjct: 491 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 550

Query: 590 KVPGSSWM 592
           K  G SW+
Sbjct: 551 KEAGMSWV 556

[Close]
BLAST of CcUC01G014570 vs. ExPASy Swiss-Prot
Match: Q9ZUW3 (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.2e-99
Identity = 197/547 (36.01%), Postives = 312/547 (57.04%), Query Frame = 0 

Query: 48  YASLLNRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMP 107
           +A+ L    +      G  +H   +K  L  ++   N ++NLY+KCG +     LFD+  
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256

Query: 108 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPY 167
            ++VV+W+++I+G+  +G   EAL +F  M  +  +  +E +  S +  C+  + L    
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLN-YVRLSESSFASVIKLCANLKELRFTE 316

Query: 168 QIYSLIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESFSS-KDTVSWNAMMAGYLQL 227
           Q++  +V+ G+  +  +  A + A  +   +L+AL +F+      + VSW AM++G+LQ 
Sbjct: 317 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 376

Query: 228 -AYFELPKFWRRMNLEGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVG 287
               E    +  M  +GV+P+ FT++ ILT L  +S      +VH Q+VK  Y     VG
Sbjct: 377 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVG 436

Query: 288 NSLCDMYIKNQKLLDGFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVR 347
            +L D Y+K  K+ +  K F  +   D+ +W+ M AG  Q GE   A+++  E+   G++
Sbjct: 437 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 496

Query: 348 LNKFTLATALNAC-ANLASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANV 407
            N+FT ++ LN C A  ASM +GK+FHG  IK   D  +CV +ALL MYAK G + SA  
Sbjct: 497 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 556

Query: 408 VFRSMDERSVVSWTTMIMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGF 467
           VF+   E+ +VSW +MI G+A +GQA +AL +F EM+K + + + +TFI V  AC+  G 
Sbjct: 557 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 616

Query: 468 VDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLL 527
           V+E  KYF  M  D  I+P+++H  CMV+L  RAG +++A  +I  MP   GS +W+T+L
Sbjct: 617 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 676

Query: 528 GACLVHGDLETGKRAADRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKK 587
            AC VH   E G+ AA++ + +   D + YVLLSNM A   +W     +R+LM  R+VKK
Sbjct: 677 AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKK 736

Query: 588 VPGSSWM 592
            PG SW+
Sbjct: 737 EPGYSWI 738

[Close]
BLAST of CcUC01G014570 vs. ExPASy TrEMBL
Match: A0A1S4E4G2 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=3656 GN=LOC103504641 PE=4 SV=1)

HSP 1 Score: 1135.2 bits (2935), Expect = 0.0e+00
Identity = 548/591 (92.72%), Postives = 566/591 (95.77%), Query Frame = 0 

Query: 1   MPLYFHLVRPFIFNSKSTKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSD 60
           MPL FHL RP I  SKST LQ SIALRISHKSFIS S++SSVKLEDFY S L RCVQTSD
Sbjct: 1   MPLCFHLARPLILISKSTDLQKSIALRISHKSFISKSEDSSVKLEDFYVSFLQRCVQTSD 60

Query: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAG 120
           SRHGSAIHAKFLKGFLPFSLFFHNHVLNLY+KCG LSYGLQLFDEMPERNVVSWSAIIAG
Sbjct: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYLKCGRLSYGLQLFDEMPERNVVSWSAIIAG 120

Query: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGS 180
           FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACS TQRLIC YQIY+ IVRLGYGS
Sbjct: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGS 180

Query: 181 NVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240
           NVFLMNAFLTALIRHEKLLEALEVFES  SKDTVSWNAMMAGYLQLAYFELPKFWRRMNL
Sbjct: 181 NVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240

Query: 241 EGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLD 300
           E VKPDNFTFASILTGLAALSEFRLGLQVHGQLVK+GYGNDICVGNSLCDMYIKNQKLLD
Sbjct: 241 ESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYIKNQKLLD 300

Query: 301 GFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACAN 360
           GFKAFDEM SSDVCSWTQMA+GCLQCGEPMKALEV+YEMKNVGVRLNKFTLATALN+CAN
Sbjct: 301 GFKAFDEMSSSDVCSWTQMASGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCAN 360

Query: 361 LASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTM 420
           LAS+EEGKKFHGLRIKLGTD+DVCVDNALLDMYAKCGCM SANVVFRSMDERSVVSWTTM
Sbjct: 361 LASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTM 420

Query: 421 IMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHG 480
           IMGFAHNGQ +EALQIFDEMRKGEAEPNHITFICVL ACSQGGF+DEAWKYFSSMSADHG
Sbjct: 421 IMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHG 480

Query: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAA 540
           I+PSEDHYVCMVNLLGRAGCIKEAEDLILQMPF+PGSLVWQTLLGACLVHGD+ETGKRAA
Sbjct: 481 IAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAA 540

Query: 541 DRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM 592
           + +LNLDRNDPSTY+LLSNM AGGNNWD VGSLRELMETRDVKKVPGSSWM
Sbjct: 541 EHALNLDRNDPSTYILLSNMFAGGNNWDGVGSLRELMETRDVKKVPGSSWM 591

[Close]
BLAST of CcUC01G014570 vs. ExPASy TrEMBL
Match: A0A0A0LVZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043090 PE=4 SV=1)

HSP 1 Score: 1127.1 bits (2914), Expect = 0.0e+00
Identity = 544/591 (92.05%), Postives = 562/591 (95.09%), Query Frame = 0 

Query: 1   MPLYFHLVRPFIFNSKSTKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSD 60
           MPL FHL RP    SKST LQ SIALRIS KSF+S S+NSSVKLEDFY S L RCV TSD
Sbjct: 1   MPLCFHLARPLFLISKSTDLQKSIALRISRKSFVSKSENSSVKLEDFYVSFLQRCVLTSD 60

Query: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAG 120
           SRHGSAIHAKFLKGFLPFSLFFHNHVLN YVKCG LSYGLQLFDEMPERNVVSWSAIIAG
Sbjct: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAG 120

Query: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGS 180
           FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACS TQRLIC YQIY+ IVRLGYGS
Sbjct: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGS 180

Query: 181 NVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240
           NVFLMNAFLTALIRHEKLLEALEVFES  SKDTVSWNAMMAGYLQLAYFELPKFWRRMNL
Sbjct: 181 NVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240

Query: 241 EGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLD 300
           E VKPDNFTFASILTGLAALSEFRLGLQVHGQLVK+GYGNDICVGNSLCDMY+KNQKLLD
Sbjct: 241 ESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLD 300

Query: 301 GFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACAN 360
           GFKAFDEM SSDVCSWTQMAAGCLQCGEPMKALEV+YEMKNVGVRLNKFTLATALN+CAN
Sbjct: 301 GFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCAN 360

Query: 361 LASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTM 420
           LAS+EEGKKFHGLRIKLGTD+DVCVDNALLDMYAKCGCM SANVVFRSMDERSVVSWTTM
Sbjct: 361 LASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTM 420

Query: 421 IMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHG 480
           IMGFAHNGQ +EALQIFDEMRKGEAEPNHITFICVL ACSQGGF+DEAWKYFSSMSADHG
Sbjct: 421 IMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHG 480

Query: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAA 540
           I+PSEDHYVCMVNLLGRAGCIKEAEDLILQMPF+PGSLVWQTLLGACLVHGD+ETGKRAA
Sbjct: 481 IAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAA 540

Query: 541 DRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM 592
           + +LNLDRNDPSTY+LLSNM AGG+NWDSVG LRELMETRDVKKVPGSSWM
Sbjct: 541 EHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKKVPGSSWM 591

[Close]
BLAST of CcUC01G014570 vs. ExPASy TrEMBL
Match: A0A5D3BH26 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002660 PE=4 SV=1)

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 530/567 (93.47%), Postives = 549/567 (96.83%), Query Frame = 0 

Query: 25  ALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHN 84
           +LRISHKSFIS S++SSVKLEDFY S L RCVQTSDSRHGSAIHAKFLKGFLPFSLFFHN
Sbjct: 152 SLRISHKSFISKSEDSSVKLEDFYVSFLQRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHN 211

Query: 85  HVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIM 144
           HVLNLY+KCG LSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIM
Sbjct: 212 HVLNLYLKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIM 271

Query: 145 PNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGSNVFLMNAFLTALIRHEKLLEALEV 204
           PNEFTLVSALHACS TQRLIC YQIY+ IVRLGYGSNVFLMNAFLTALIRHEKLLEALEV
Sbjct: 272 PNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEV 331

Query: 205 FESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNLEGVKPDNFTFASILTGLAALSEFR 264
           FES  SKDTVSWNAMMAGYLQLAYFELPKFWRRMNLE VKPDNFTFASILTGLAALSEFR
Sbjct: 332 FESCLSKDTVSWNAMMAGYLQLAYFELPKFWRRMNLESVKPDNFTFASILTGLAALSEFR 391

Query: 265 LGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLDGFKAFDEMPSSDVCSWTQMAAGCL 324
           LGLQVHGQLVK+GYGNDICVGNSLCDMYIKNQKLLDGFKAFDEM SSDVCSWTQMA+GCL
Sbjct: 392 LGLQVHGQLVKSGYGNDICVGNSLCDMYIKNQKLLDGFKAFDEMSSSDVCSWTQMASGCL 451

Query: 325 QCGEPMKALEVVYEMKNVGVRLNKFTLATALNACANLASMEEGKKFHGLRIKLGTDIDVC 384
           QCGEPMKALEV+YEMKNVGVRLNKFTLATALN+CANLAS+EEGKKFHGLRIKLGTD+DVC
Sbjct: 452 QCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVC 511

Query: 385 VDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTMIMGFAHNGQAREALQIFDEMRKGE 444
           VDNALLDMYAKCGCM SANVVFRSMDERSVVSWTTMIMGFAHNGQ +EALQIFDEMRKGE
Sbjct: 512 VDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGE 571

Query: 445 AEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRAGCIKEA 504
           AEPNHITFICVL ACSQGGF+DEAWKYFSSMSADHGI+PSEDHYVCMVNLLGRAGCIKEA
Sbjct: 572 AEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEA 631

Query: 505 EDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAADRSLNLDRNDPSTYVLLSNMLAGG 564
           EDLILQMPF+PGSLVWQTLLGACLVHGD+ETGKRAA+ +LNLDRNDPSTY+LLSNM AGG
Sbjct: 632 EDLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGG 691

Query: 565 NNWDSVGSLRELMETRDVKKVPGSSWM 592
           NNWD VGSLRELMETRDVKKVPGSSWM
Sbjct: 692 NNWDGVGSLRELMETRDVKKVPGSSWM 718

[Close]
BLAST of CcUC01G014570 vs. ExPASy TrEMBL
Match: A0A6J1GRX4 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucurbita moschata OX=3662 GN=LOC111456896 PE=4 SV=1)

HSP 1 Score: 1097.8 bits (2838), Expect = 0.0e+00
Identity = 530/591 (89.68%), Postives = 560/591 (94.75%), Query Frame = 0 

Query: 1   MPLYFHLVRPFIFNSKSTKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSD 60
           MPL  H+VRP IF SKSTK +HSIALRISHKSFIS S+ S VKLEDFY +LL+RCVQTSD
Sbjct: 1   MPL--HIVRPLIFVSKSTKTRHSIALRISHKSFISKSEISYVKLEDFYVNLLHRCVQTSD 60

Query: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAG 120
           SRHGSAIHAKFLKGFLP+SLFFHNHVLN YVKCG LS GLQLFDEMPERNVVSWSA+IAG
Sbjct: 61  SRHGSAIHAKFLKGFLPYSLFFHNHVLNFYVKCGSLSCGLQLFDEMPERNVVSWSAVIAG 120

Query: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGS 180
           FVQHGRPNEALSLF RMHCDGTI+PNEFTLVSALHACS TQRLIC YQIY+L++RLGYGS
Sbjct: 121 FVQHGRPNEALSLFSRMHCDGTIIPNEFTLVSALHACSLTQRLICSYQIYALVLRLGYGS 180

Query: 181 NVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240
           N+FLMNAFLTALIRHEKLLEALEVF S SSKD VSWNAMMAGYLQL+Y ELPKFWRRMNL
Sbjct: 181 NIFLMNAFLTALIRHEKLLEALEVFGSSSSKDIVSWNAMMAGYLQLSYLELPKFWRRMNL 240

Query: 241 EGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLD 300
           E +KPDNFTFASILTGLAALSEF+LGLQVHGQLVK+GYGNDICVGNSLCDMYIKNQKLLD
Sbjct: 241 ENIKPDNFTFASILTGLAALSEFKLGLQVHGQLVKSGYGNDICVGNSLCDMYIKNQKLLD 300

Query: 301 GFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACAN 360
           GFKAFDEMPSSDVCSWTQMAAGCL CGEPMKALEV+Y+MKNVGVRLNKFTLATALNA AN
Sbjct: 301 GFKAFDEMPSSDVCSWTQMAAGCLHCGEPMKALEVIYDMKNVGVRLNKFTLATALNASAN 360

Query: 361 LASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTM 420
           LAS+EEGKKFHGLRIKLG DIDVCVDNALLDMYAKCGCM+SANVVFRSMDE+SVVSWTTM
Sbjct: 361 LASIEEGKKFHGLRIKLGADIDVCVDNALLDMYAKCGCMSSANVVFRSMDEQSVVSWTTM 420

Query: 421 IMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHG 480
           IMGFAHNGQA+EALQIFDEMRK  AEPNHITFICVLYACSQGGF+DEAWKYFSSMSADHG
Sbjct: 421 IMGFAHNGQAKEALQIFDEMRKEGAEPNHITFICVLYACSQGGFIDEAWKYFSSMSADHG 480

Query: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAA 540
           ISPSEDHYVCMVNLLGRAGCIKEAEDLI +MPF+PGSLVWQTLLGACLVHGD+ETGKRAA
Sbjct: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLIGRMPFKPGSLVWQTLLGACLVHGDVETGKRAA 540

Query: 541 DRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM 592
           + +LNLD+NDPSTYVLLSNM AG +NWD VGSLRELMETRDVKKVPG SWM
Sbjct: 541 EHALNLDQNDPSTYVLLSNMFAGRSNWDGVGSLRELMETRDVKKVPGFSWM 589

[Close]
BLAST of CcUC01G014570 vs. ExPASy TrEMBL
Match: A0A6J1K498 (pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita maxima OX=3661 GN=LOC111490529 PE=4 SV=1)

HSP 1 Score: 1092.4 bits (2824), Expect = 0.0e+00
Identity = 528/591 (89.34%), Postives = 559/591 (94.59%), Query Frame = 0 

Query: 1   MPLYFHLVRPFIFNSKSTKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSD 60
           MPL  H+ RP IF SKSTK +HSIALRISHKSFIS S+ SSVKLEDFY +LL+RCVQTSD
Sbjct: 1   MPL--HIARPLIFVSKSTKTRHSIALRISHKSFISKSEISSVKLEDFYVNLLHRCVQTSD 60

Query: 61  SRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAG 120
           SRHGSAIHAKFLKGFLP+SLFFHNHVLN YVKCG LS GLQLFDEMPERNVVSWSA+IAG
Sbjct: 61  SRHGSAIHAKFLKGFLPYSLFFHNHVLNFYVKCGSLSCGLQLFDEMPERNVVSWSAVIAG 120

Query: 121 FVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGS 180
           FVQHGRPNEALSLF RMHCDGTI+PNEFTLVSALHACS TQRLIC YQIY+L++RLGYGS
Sbjct: 121 FVQHGRPNEALSLFSRMHCDGTIIPNEFTLVSALHACSLTQRLICSYQIYALVLRLGYGS 180

Query: 181 NVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNL 240
           N+FLMNAFLTALIRHEKLLEALEVFE+ SSKD VSWNAMMAGYLQL+YFELPKFWRRMNL
Sbjct: 181 NIFLMNAFLTALIRHEKLLEALEVFENSSSKDIVSWNAMMAGYLQLSYFELPKFWRRMNL 240

Query: 241 EGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLD 300
           E +KPDNFTFASILTGLAALSEF+LGLQVHG LVK+GYGNDICVGNSLCDMYIKNQKLLD
Sbjct: 241 EDIKPDNFTFASILTGLAALSEFKLGLQVHGLLVKSGYGNDICVGNSLCDMYIKNQKLLD 300

Query: 301 GFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACAN 360
           GFKAFDEMPSSDVCSWTQMAAGCL CGEPMKALEV+Y+MKNVGVRLNKFTLATALNA AN
Sbjct: 301 GFKAFDEMPSSDVCSWTQMAAGCLHCGEPMKALEVIYDMKNVGVRLNKFTLATALNASAN 360

Query: 361 LASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTM 420
           LAS+EEGKKFHGLRIKLG DIDVCVDNALLDMYAKCGCM+SANVVFRSMDE+SVVSWTTM
Sbjct: 361 LASIEEGKKFHGLRIKLGADIDVCVDNALLDMYAKCGCMSSANVVFRSMDEQSVVSWTTM 420

Query: 421 IMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHG 480
           IMGFAHNGQA+EALQIFDEMRK  AEPNHITFICVLYACSQGGF+DEAWKYFSSMSADHG
Sbjct: 421 IMGFAHNGQAKEALQIFDEMRKEGAEPNHITFICVLYACSQGGFIDEAWKYFSSMSADHG 480

Query: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAA 540
           ISPSEDHYVCMVNLLGRAGCIKEAEDLI +M F+PGSLVWQTLLGACLVHGD+ETGKRAA
Sbjct: 481 ISPSEDHYVCMVNLLGRAGCIKEAEDLIGRMLFKPGSLVWQTLLGACLVHGDVETGKRAA 540

Query: 541 DRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM 592
           + +LNLD+ND STYVLLSNM AG +NWD VGSLRELMETRDVKKVPG SWM
Sbjct: 541 EHALNLDQNDSSTYVLLSNMFAGRSNWDGVGSLRELMETRDVKKVPGFSWM 589

[Close]
BLAST of CcUC01G014570 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 384.0 bits (985), Expect = 2.1e-106
Identity = 218/633 (34.44%), Postives = 336/633 (53.08%), Query Frame = 0 

Query: 31  KSFISI-SDNSSVKLEDFYASLLNRCVQTSDSR-HGSAIHAKFLKGFLPFSLFFHNHVLN 90
           KSF+ + +D SS      +A LL+ C+++  S  +   +HA  +K      +F  N +++
Sbjct: 4   KSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLID 63

Query: 91  LYVKCGGLSYGLQLFDEMPERNVVSWSAI------------------------------- 150
            Y KCG L  G Q+FD+MP+RN+ +W+++                               
Sbjct: 64  AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123

Query: 151 IAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQIYSLIVRLG 210
           ++GF QH R  EAL  F  MH +G ++ NE++  S L ACS    +    Q++SLI +  
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVL-NEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 183

Query: 211 YGSNVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLA-YFELPKFWR 270
           + S+V++ +A +    +   + +A  VF+    ++ VSWN+++  + Q     E    ++
Sbjct: 184 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 243

Query: 271 RMNLEGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAG-YGNDICVGNSLCDMYIKN 330
            M    V+PD  T AS+++  A+LS  ++G +VHG++VK     NDI + N+  DMY K 
Sbjct: 244 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 303

Query: 331 QKLLDGFKAFDEMP-------------------------------SSDVCSWTQMAAGCL 390
            ++ +    FD MP                                 +V SW  + AG  
Sbjct: 304 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 363

Query: 391 QCGEPMKALEVVYEMKNVGVRLNKFTLATALNACANLASMEEGKKF------HGLRIKLG 450
           Q GE  +AL +   +K   V    ++ A  L ACA+LA +  G +       HG + + G
Sbjct: 364 QNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSG 423

Query: 451 TDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTMIMGFAHNGQAREALQIFD 510
            + D+ V N+L+DMY KCGC+    +VFR M ER  VSW  MI+GFA NG   EAL++F 
Sbjct: 424 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 483

Query: 511 EMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRA 570
           EM +   +P+HIT I VL AC   GFV+E   YFSSM+ D G++P  DHY CMV+LLGRA
Sbjct: 484 EMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 543

Query: 571 GCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAADRSLNLDRNDPSTYVLLS 592
           G ++EA+ +I +MP +P S++W +LL AC VH ++  GK  A++ L ++ ++   YVLLS
Sbjct: 544 GFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLS 603

[Close]
BLAST of CcUC01G014570 vs. TAIR 10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 373.6 bits (958), Expect = 2.9e-103
Identity = 207/587 (35.26%), Postives = 327/587 (55.71%), Query Frame = 0 

Query: 8   VRPFIFNSKS-TKLQHSIALRISHKSFISISDNSSVKLEDFYASLLNRCVQTSDSRHGSA 67
           V   IF +K  ++  HS       K F  + ++     +  +  +L   V+      G  
Sbjct: 277 VSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ 336

Query: 68  IHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAGFVQHGR 127
           +H   LK  L   L   N ++N+Y K     +   +FD M ER+++SW+++IAG  Q+G 
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396

Query: 128 PNEALSLFGRMHCDGTIMPNEFTLVSALHAC-SFTQRLICPYQIYSLIVRLGYGSNVFLM 187
             EA+ LF ++   G + P+++T+ S L A  S  + L    Q++   +++   S+ F+ 
Sbjct: 397 EVEAVCLFMQLLRCG-LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 456

Query: 188 NAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQL-AYFELPKFWRRMNLEGVK 247
            A + A  R+  + EA  +FE  +  D V+WNAMMAGY Q     +  K +  M+ +G +
Sbjct: 457 TALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 516

Query: 248 PDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVGNSLCDMYIKNQKLLDGFKA 307
            D+FT A++      L     G QVH   +K+GY  D+ V + + DMY+K   +     A
Sbjct: 517 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 576

Query: 308 FDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACANLASM 367
           FD +P  D  +WT M +GC++ GE  +A  V  +M+ +GV  ++FT+AT   A + L ++
Sbjct: 577 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 636

Query: 368 EEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANVVFRSMDERSVVSWTTMIMGF 427
           E+G++ H   +KL    D  V  +L+DMYAKCG +  A  +F+ ++  ++ +W  M++G 
Sbjct: 637 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 696

Query: 428 AHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHGISPS 487
           A +G+ +E LQ+F +M+    +P+ +TFI VL ACS  G V EA+K+  SM  D+GI P 
Sbjct: 697 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 756

Query: 488 EDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAADRSL 547
            +HY C+ + LGRAG +K+AE+LI  M     + +++TLL AC V GD ETGKR A + L
Sbjct: 757 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL 816

Query: 548 NLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKKVPGSSWM 592
            L+  D S YVLLSNM A  + WD +   R +M+   VKK PG SW+
Sbjct: 817 ELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861

[Close]
BLAST of CcUC01G014570 vs. TAIR 10
Match: AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 369.4 bits (947), Expect = 5.4e-102
Identity = 211/569 (37.08%), Postives = 313/569 (55.01%), Query Frame = 0 

Query: 29  SHKSFISISD--NSSVKLEDF-YASLLNRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHNH 88
           SHK      D  +S   ++DF + SLL+ C  + D   GS  H+  +K  L  +LF  N 
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468

Query: 89  VLNLYVKCGGLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMP 148
           ++++Y KCG L    Q+F+ M +R+ V+W+ II  +VQ    +EA  LF RM+  G I+ 
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG-IVS 528

Query: 149 NEFTLVSALHACSFTQRLICPYQIYSLIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVF 208
           +   L S L AC+    L    Q++ L V+ G   ++   ++ +    +   + +A +VF
Sbjct: 529 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 588

Query: 209 ESFSSKDTVSWNAMMAGYLQLAYFELPKFWRRMNLEGVKPDNFTFASILTGLAALSEFRL 268
            S      VS NA++AGY Q    E    ++ M   GV P   TFA+I+          L
Sbjct: 589 SSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 648

Query: 269 GLQVHGQLVKAGYGND-ICVGNSLCDMYIKNQKLLDGFKAFDEMPS-SDVCSWTQMAAGC 328
           G Q HGQ+ K G+ ++   +G SL  MY+ ++ + +    F E+ S   +  WT M +G 
Sbjct: 649 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 708

Query: 329 LQCGEPMKALEVVYEMKNVGVRLNKFTLATALNACANLASMEEGKKFHGLRIKLGTDIDV 388
            Q G   +AL+   EM++ GV  ++ T  T L  C+ L+S+ EG+  H L   L  D+D 
Sbjct: 709 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 768

Query: 389 CVDNALLDMYAKCGCMASANVVFRSMDERS-VVSWTTMIMGFAHNGQAREALQIFDEMRK 448
              N L+DMYAKCG M  ++ VF  M  RS VVSW ++I G+A NG A +AL+IFD MR+
Sbjct: 769 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 828

Query: 449 GEAEPNHITFICVLYACSQGGFVDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRAGCIK 508
               P+ ITF+ VL ACS  G V +  K F  M   +GI    DH  CMV+LLGR G ++
Sbjct: 829 SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQ 888

Query: 509 EAEDLILQMPFRPGSLVWQTLLGACLVHGDLETGKRAADRSLNLDRNDPSTYVLLSNMLA 568
           EA+D I     +P + +W +LLGAC +HGD   G+ +A++ + L+  + S YVLLSN+ A
Sbjct: 889 EADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYA 948

Query: 569 GGNNWDSVGSLRELMETRDVKKVPGSSWM 592
               W+   +LR++M  R VKKVPG SW+
Sbjct: 949 SQGCWEKANALRKVMRDRGVKKVPGYSWI 976

[Close]
BLAST of CcUC01G014570 vs. TAIR 10
Match: AT3G15130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 365.5 bits (937), Expect = 7.8e-101
Identity = 187/548 (34.12%), Postives = 304/548 (55.47%), Query Frame = 0 

Query: 50  SLLNRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMPER 109
           S+L  C +   S  G  +H   LK     +L   N+++++Y KC       ++FD MPER
Sbjct: 11  SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70

Query: 110 NVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPYQI 169
           NVVSWSA+++G V +G    +LSLF  M   G I PNEFT  + L AC     L    QI
Sbjct: 71  NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQI 130

Query: 170 YSLIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESFSSKDTVSWNAMMAGYLQLAY- 229
           +   +++G+   V + N+ +    +  ++ EA +VF     +  +SWNAM+AG++   Y 
Sbjct: 131 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 190

Query: 230 ---FELPKFWRRMNLEGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGY--GNDIC 289
               +     +  N++  +PD FT  S+L   ++      G Q+HG LV++G+   +   
Sbjct: 191 SKALDTFGMMQEANIK-ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 250

Query: 290 VGNSLCDMYIKNQKLLDGFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVG 349
           +  SL D+Y+K   L    KAFD++    + SW+ +  G  Q GE ++A+ +   ++ + 
Sbjct: 251 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 310

Query: 350 VRLNKFTLATALNACANLASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASAN 409
            +++ F L++ +   A+ A + +GK+   L +KL + ++  V N+++DMY KCG +  A 
Sbjct: 311 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 370

Query: 410 VVFRSMDERSVVSWTTMIMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGG 469
             F  M  + V+SWT +I G+  +G  +++++IF EM +   EP+ + ++ VL ACS  G
Sbjct: 371 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 430

Query: 470 FVDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTL 529
            + E  + FS +   HGI P  +HY C+V+LLGRAG +KEA+ LI  MP +P   +WQTL
Sbjct: 431 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 490

Query: 530 LGACLVHGDLETGKRAADRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVK 589
           L  C VHGD+E GK      L +D  +P+ YV++SN+      W+  G+ REL   + +K
Sbjct: 491 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 550

Query: 590 KVPGSSWM 592
           K  G SW+
Sbjct: 551 KEAGMSWV 556

[Close]
BLAST of CcUC01G014570 vs. TAIR 10
Match: AT2G27610.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 363.6 bits (932), Expect = 3.0e-100
Identity = 197/547 (36.01%), Postives = 312/547 (57.04%), Query Frame = 0 

Query: 48  YASLLNRCVQTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNLYVKCGGLSYGLQLFDEMP 107
           +A+ L    +      G  +H   +K  L  ++   N ++NLY+KCG +     LFD+  
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256

Query: 108 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSFTQRLICPY 167
            ++VV+W+++I+G+  +G   EAL +F  M  +  +  +E +  S +  C+  + L    
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLN-YVRLSESSFASVIKLCANLKELRFTE 316

Query: 168 QIYSLIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESFSS-KDTVSWNAMMAGYLQL 227
           Q++  +V+ G+  +  +  A + A  +   +L+AL +F+      + VSW AM++G+LQ 
Sbjct: 317 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 376

Query: 228 -AYFELPKFWRRMNLEGVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKAGYGNDICVG 287
               E    +  M  +GV+P+ FT++ ILT L  +S      +VH Q+VK  Y     VG
Sbjct: 377 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVG 436

Query: 288 NSLCDMYIKNQKLLDGFKAFDEMPSSDVCSWTQMAAGCLQCGEPMKALEVVYEMKNVGVR 347
            +L D Y+K  K+ +  K F  +   D+ +W+ M AG  Q GE   A+++  E+   G++
Sbjct: 437 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 496

Query: 348 LNKFTLATALNAC-ANLASMEEGKKFHGLRIKLGTDIDVCVDNALLDMYAKCGCMASANV 407
            N+FT ++ LN C A  ASM +GK+FHG  IK   D  +CV +ALL MYAK G + SA  
Sbjct: 497 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 556

Query: 408 VFRSMDERSVVSWTTMIMGFAHNGQAREALQIFDEMRKGEAEPNHITFICVLYACSQGGF 467
           VF+   E+ +VSW +MI G+A +GQA +AL +F EM+K + + + +TFI V  AC+  G 
Sbjct: 557 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 616

Query: 468 VDEAWKYFSSMSADHGISPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFRPGSLVWQTLL 527
           V+E  KYF  M  D  I+P+++H  CMV+L  RAG +++A  +I  MP   GS +W+T+L
Sbjct: 617 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 676

Query: 528 GACLVHGDLETGKRAADRSLNLDRNDPSTYVLLSNMLAGGNNWDSVGSLRELMETRDVKK 587
            AC VH   E G+ AA++ + +   D + YVLLSNM A   +W     +R+LM  R+VKK
Sbjct: 677 AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKK 736

Query: 588 VPGSSWM 592
            PG SW+
Sbjct: 737 EPGYSWI 738

The following BLAST results are available for this feature:
BLAST of CcUC01G014570 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038894950.10.0e+0093.57pentatricopeptide repeat-containing protein At4g33170-like isoform X1 [Benincasa... [more]
XP_008467246.10.0e+0092.72PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis m... [more]
XP_011650978.10.0e+0092.05putative pentatricopeptide repeat-containing protein At3g15130 [Cucumis sativus]... [more]
TYJ99062.10.0e+0093.47pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
KAG7012171.10.0e+0089.68Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
BLAST of CcUC01G014570 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SIT73.0e-10534.44Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Q9SMZ24.0e-10235.26Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... [more]
Q9SS837.6e-10137.08Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... [more]
P0C8981.1e-9934.12Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis th... [more]
Q9ZUW34.2e-9936.01Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX... [more]
BLAST of CcUC01G014570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E4G20.0e+0092.72pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=36... [more]
A0A0A0LVZ10.0e+0092.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043090 PE=4 SV=1[more]
A0A5D3BH260.0e+0093.47Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1GRX40.0e+0089.68pentatricopeptide repeat-containing protein At2g13600-like OS=Cucurbita moschata... [more]
A0A6J1K4980.0e+0089.34pentatricopeptide repeat-containing protein At4g33170-like OS=Cucurbita maxima O... [more]
BLAST of CcUC01G014570 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G13600.12.1e-10634.44Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G33170.12.9e-10335.26Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G09040.15.4e-10237.08Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G15130.17.8e-10134.12Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G27610.13.0e-10036.01Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 261..371
e-value: 4.3E-18
score: 67.3
coord: 167..260
e-value: 5.5E-13
score: 50.6
coord: 21..164
e-value: 1.9E-20
score: 75.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 387..591
e-value: 2.9E-40
score: 140.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 315..344
e-value: 0.0021
score: 18.2
coord: 488..511
e-value: 0.044
score: 14.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 109..157
e-value: 6.6E-8
score: 32.6
coord: 413..459
e-value: 1.2E-11
score: 44.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 450..484
e-value: 6.5E-5
score: 20.8
coord: 415..448
e-value: 5.2E-7
score: 27.4
coord: 112..142
e-value: 2.5E-6
score: 25.3
coord: 315..347
e-value: 0.0027
score: 15.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 448..483
score: 8.527949
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 9.426776
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 413..447
score: 11.794416
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 110..144
score: 10.500983
NoneNo IPR availablePANTHERPTHR24015:SF1725TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEINcoord: 32..591
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 32..591

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G014570.1CcUC01G014570.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding