CcUC01G012000 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G012000
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCytochrome f
LocationCicolChr01: 20993224 .. 21006358 (-)
RNA-Seq ExpressionCcUC01G012000
SyntenyCcUC01G012000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTGTGTGAAATTCAAGTACCATACTAAGTCTTTTCTACATATCTATTGAATATGAATGATTAAACGTTGAAATTTTTCTATCACATAATCTATCTAATGCATGCGACCTGCTAGATAATGTTCAAAATATGTGTAAAAATGTGGCTCATCAACTAAAGGTAGAGTTTAAATAGATTATTTTTTCTCTTCAACATATATTCTTTTTAGTTTTAAAAAGTTTTAACTTTTAGATTAGGAATTATTTCCTTTTCAATCACTTTCAACCCATTTTTGCTATTCATTCTTATCAAAACTCATGAAATGGGTCCTTGTTCACATTATCTAAAAGGGAATTCGACTTGGTTTACGTTTATATCCAAACAATTCTTGGATTTCTTTTCTTTTAATATATTTATTTAGAATTAATTACCTACAACTACCTTGTTCAAAAAGGTAATTTCATCAACTTCAAAGTATTAATAGAAGAATACAATGCAAAGAAAAATTGAGGATAAGTAAACTTTAGATGTAGTTCTGAGAATTTATTAGTAATGTACCATATCGCTAATAGTAGTCTATTAGCAATAGTGTTTATTAAAAATAGATTTTGTTATATCTACAATTTTTTAAAATGTTATTATACACTTAATTATTACTCTAATAGTGCTATCTATTGCAATTATCCTTTCTTGATGTAGCTTCCTTTACCTTAAGAGAACCTTTGAAACTTATTCTTCAAAGTATTTTTTTTAGTATAATTGTGATAGGAGAATTCGAACTACAGATCTTGTGATTTCTAATTCACTTAGATATCCATTGAGCCATACTCGATTTAGCTTTTTCTTCCAAGTTTGTGGAGGAGAGAGTGTATATGTGGAGAATAATATAAATTTGAAGGGTGTCACACAAATAACCCAACTAGGAGGCAACTTCAATTAGGGGGAAGAAGGACATGACAAGGTCAAGACTAAAGCCGTGTTCCACTATCAACTACTCGACATATGAAAGGGATGTGTACAATGGCTTTGGCCAAGTGTCAAACACATATATTATATATTGAAAATTCCAAGAATATTTCATGAATCCAAACTACATATATTATTATCTCAGAGTTAAAAAAGTCAAGAACACATCCTATACTTAACTTGACTTAACAAGATAAATGATTAATTTTAATTGTGCATTTTAGAAAATGATGAACATCCTTATTATTAGAAAAATAGTAAAACATAATATTTAAATATTAAATCGAATCTATCGAAGGACTAAAATATGCCAAATCCTAAAATTTTGGTGAGAGCTATAATTATGGGATATGTAATTCAAGGGTCTGTTTAGATTGAATATAAAAAAAAAAAATTAAATAGTATTTTGGTCTTTTTTTTTCTTTTTAATTTTTGTTGGAGATTTATCAATTGGCTTTCAATTGCTTTAAGACAGCTCATGGACTTTTAGTTGTTGTCACAAATATAGAAATTACAGCAGAATATTTCATTCACGAAAAGGATTTCTCCATTTTAGGGGACCTGAGTTTCATCAATGAAGGGAGTTTACTAAACTATAAGAAAGATAATCGACCTGAGAGGAGTCTCGCCCATTGTCGGATACCGAAATTTTTTTCACTAATATTATCACACTTAGAGGAGCCTAAGTACTTTTGAGAGAATCTCACATCTAGGGGGAGCTTAGGTATTTAGCTAGTTAACCTCTACAAGAGTCACTTTAGAAGTTGATACTTTATAGATAAGTACATTGTTAAAAACGCTTAATAATTCAATATTAGTGGATTATCTTCGTGGACACACTGTCCCCCGAACATAGGTGGTCATCATCAAACTAGGTTACCAGCTCTTGCGTGTAATTGGTCGACTTGCTATTTAATTTATTGATTGTTACAAATGATTGTCAGTGCTTTCTATTTAGCGTGCGTGTTTGAGTGTCTAGTTATATAATAGCTTTTTCAACTTTGACTCATTTTGGTCTTGTACTTCTAAAATGTTCATTTTAGTTCCTATTCTTTCAACTTACGTCATTTTGGTCCCTATACTTATAAAAGGTTCCGTCTGGTCCTTGTATTTCTAATTTTGGTTCATTTTGGTCCTTATAATTTTAAAAAATGATTATTTTGGTTCTTTGAATCAAAATAGCCACTTTTTTAAAGTTCAAGAACCAAAATGAACAAAAGTTGAAAGTATAAGGACCAAAATGAACCAAAGTTGAAAATATATGAGGACCAACATTTTTTTAAAAGTTATTTTGAGTGGTAGCCAAACACTTCAATTTTTTTCAAAATAACTTAAAAAGAATCAACACTTGAAAAGTTAAACCAAACAAACCTACCAAGTATTTTTCATCAACATAAGAAAATAAAAGTCAAGACAATCAACTGAAAAATCTATTTGAAATGCAAGAAATAAAAATTTAAGTTAATTGAAAGTGTTAATTTAGATTTAATACAAATATACCATTGCGGAAACGAAAATAAATAACTACGAAATCAAATCAAAAGAAGTGATAAAGGGTTCAATTGCAAGAGGTATAAAACCTATATATATATCTATTTTTTTTTTTTTTTTAAATATCAATTTATATCCTTGACTTTGGAAGTTATATGAATTAAAATACTAAACTAATTATATTAATTTAAACTTTAAACTTCATAAATGTATTAATTTACACTTTCTTTCAAATTTTATCGGATCAATATTGTGTGAAACTATTAAAATTCTAAATTAATACCACTCCTAAAGTTAGGGGTATTGATTCATATTTTCTATTTTTTTTTTAATTCAATTTAATACATAATCCTAGATTTCAAATAATTGTGTGAAGCAAATCAAACCATGAAGATTTGAGGACTATTGAGTCAAATAGCATATCAAATCTAATTTTAATCGTAAAAAATTAATATCTAAAAAGCAAAGCTAATCTATCAAAGATTCATCTTTGAAAAATATTTTTGGGCCATTTTACCCTTTTAATTTGTAATGAACTACTAGCATGCCATTACAAAACATTTGCTTTAGTTTTAAATATTCAAATCATTTAATGATGTATGTACCTTATTCAATCAGAATTACCAATTCAGTTACAATATTTTAAATAATTAGAAAAATTACAAATTTAATTGTTATAATAATGGAATTTGAAGTAACTTGCTCGTTTGCTAGAATTCTAATACGTTAAATTTATAAATTGGATAACATTGCTATGTGCTGTCAAAATTCCCAACTTAATTTATAAATATGTATCTTTTTTAAATTAAATTTTAATTTTTCAATCTCGCCTGACAAAAATATTCCATCTCAAAAACTTGCTGAAATTCAATTTACGCTTGATAAAAGAACTATCTCATCTATGTTCGAAAACATAACTCCTCTTATTCAAGGTAAACTCTGCCAACCATACTAAGAATAACCCCATTAACTGATTGTTACACAATTCCATGAAAGTTGAACAAATTTGGTTTGGAAATATGATCAAAGATCAAGAAGAGAGATAGAATTTGTTCTATTTTTAAGATTTTGAGCTCTCCACAATCTAATTGATCAAACTAGATTGAAAGTTCCAAACGTACATAATAACACAAGAATTAAAGAAAAAAAAAAAAACATAAATCTCGAGAGAGAAAGAAACTCTATGAAAAATTAATTCAAATTTAAGTTCAACCTTGATAGCAAAGGTTTTGGATGGAAGTAGTGAGCCATTAAAAATTCTCCATCCAGGGATTTTAACTTTCAGTTTAACCCTCGCTCTCCAGAGGTCATTCCAAGTCATAAAAGCCTCCATCGAGTTTGAAGATGAATTATGAGACAGTAAGTCATGCGACGTGGGAATGGAAGTTCTCGAGGAAGATTTGGAGTTTCTTCTCTTCCGTCTTAGTTTTTTTCTACGCATCATCGGTCACCACCGGCTGTTGGGCAATTTGAAATTAAATGTGGACATGCGTTAGCCGAACGAGAAAGGTAGGGGTGGATAGTTTTGACCATTTCGGTCCTGCGATTATGAGTGGGTGTAAGTTTAAGTCAAAGGGTTGAAGTCCAAGCCTTTTTCAAGCTAAAGCGTTCGTTGATAACTTGTAGAAAATAATGAAGGTAACTTAAGGGAAATTGTATTAGCCTTAGTAGAAAATTATGCAAAAATACCTTCTTCGCTTTGAACATGTACAAAACTAAGAATTCTGAAATATCATATTTTAACCCACTTAAATGCAGAAAATTCAAGCAAATTACTAAGGCATTAGCAACCCTACGTTGATAACCAAGAGATGCGGCGAAGCAAGTGTCAAAGCGGGGTTGCGGCGAAAGATGTACGAAACGCATAGCCAAAGACCACTGACAACTATAATGAGCAACGTGAAAAAGTTTTCTGACGCGTTTGCTGTGGTCTTGAATGACATAGAATTTCCCCTACGTCCAACTGTAAATAGATTGACCCTGAAAGAGAGAGAGGATGACCATTAGCCATTCCATTCCACTTGGGGAAGATCGCCAGAGAACAAAATCTCCAGGGAGTTTTCTAATCCTCTTGCCTTCCAACCAGTGTTAGTAGCGCATAGTTAAAGCAAGCAGCACCACTAGAGTCTACGGGAAGTAGGAGACTACTGACCATTGGGTTGAAGCTTTCCTCCATTGCTCCATTTCTTCCATATGTTTTCTATTTTCTATTTTTCCTTTTGAGACATTGATGCTGGTTTTGTATTCAAATATTTTTAGTCTTAATCTATAAATATCATGAACTTCATCTCCTCCACTCTTCCAATTTTATTTTATCTTCTACCATGGGTAACTAATTTTCTTGTGGGAGGGGTTGAATAAACCATCATTTCAGCGAGCATAGCATAACTGGAGGTTCATTTTGCTTGGTGTGTGGGTATTTTATTGTTTGTTTTCTCATCTAGCTTATAAGCCTCACACTTAGCTTTGGAAGTTAACAATCTATAAAGAATGATTATAGAAGATAACAAGCTGAAGGAAGTAAGTGAAGAGTGGCCGAGAGCCTTAAGGCATGATTGAAGCAAGAGTTCATGAGAGTGAGATTGGGTAATGGCTGAAAATAGTGAATGTCACACCCTTTCCCGAACTACCCTCCTGTAACCCGAGACGGAGCGTGAGGACAACAGTCATCGACCCTATTATCGACTTCTGCTGCGCAACTTCCCTTATGCCTATTTAACCACTCTTCCTAGGACGGCGATACCATTAACTTTTGACAAACCTCGACTTTGATCGGCAACGGGAACTGTCATGCTACCTGAAAAATGGAAAACATATAAAAAGATGAGCTAAATGCCCGGTAAGTGACAGATTTTGTGAAACTATCTTTAATTCAAAAGCAGGCACGTTATCATCATTATATCACAAAACGCTTAATTCAAATCATCATTTCTATAAAATCATACTTTCAACTTATAATCAAATCACATAAATACATTCCAGAGTAGTTGTACATAAAATCAGTTTGTTCTCAACAATTTTCCTTAGTTGAGGCGGAGCAAGACTCAACACTCTTAACGTCGAAAACATCCTTAGTTGGGTTGGAGCAAAACTCAACACACTCAACGTCGAAATCATTCCTGGCTCGATGCGGAGCAAAACTCGACGTACCAGCAATATCAACCTCTATGTGCACATAGGAAATATGGCGGGTCGCCCATGTACCTTCTTATGTCCCTCAGTACTGGGTCCCGAGGAAACTCACATGCCTTCTCATGTCCCTCAGCATTGAGCCTCCTCTAAAACATTTCAGAAACCAACATTTTACATAACTAGTTCATATGAAATCTTTCATGAAGAAATAAGATATTCCTCGGTAAACTACATTTTACAACATGCTTTTCAACAACTTAAAGAAAACAATAAGACATGCCTTGTGAACTAAATATATTCAAGCACTATGCTTTTCAAATAATCATTTTTCATCAAATCATAGTTCATAATGAAATTAGAATAACATTTCAAAATAAACATTTTCAAAGAAAGAAAGGTGTCACTCATAGAACACTTTAAGGATAGTTTCTCCTCTATCCCTCTATTTTTCCTTTCCCGAGCTTCTTGGACGCAGCGTTATAATCCTGGAACGCAAGGCCTTATATTCCTCTGGTAGCTCGGTTGGTTGCAACCCTGCCCTTAGACGCAAGGTTAATAGCTAATGCAAGGTGCATCCCAACTCTTCCTTACTTCTCTTTTTGGATGCGTCGACCGCGCAAGGTCCCACTTGGACGCATCGCTCACCTTGAAACTTAAACGGAAGGCTGACCCTTTTTGACGCAAAACAATTCTTTAACACAAGATATAGCTAAGTTGTCAAGAATATCTTCTTCCTTGGCCGTAGACTTTTATTATGGACACAAGGATTCCTCCTTTCTCTCAAGAATTCTTACTTCAGCATCATCAGCCACTCATTTTCTCTCAAGGTCCTATTTATAGCTTTGGGGTAGAGGACTGATCATACTACTTCTCCTCCCTGTTTGTCACTTGTTTCCATATGTCACGTTGCAATTTAACCAACCATGTATTTATCCAAGCGTCACTTTGCATGCAATACTTAACATGCCTTTTAACACCTCCAGCTTATGAGGTGTCAGGTTTATATGAAGCCACCTAGCCTTTATAAGCTTATCTCATATGTCCAACATATTCTAATATACAACTATTCATTCAATCATATTGCCCCAATGCGTCCACGGAATTTCCTTTAGGGTTTTAGCTTCATTATTTACATTCTTTACTCCTGACCATAATACCTATGAACCCGTTTCTTCACCGTACATTACTAGGCGTCAATGTCTCAAACATATACTACTATGCGTTTGTACCTTACCGCATCGTACCGTGCGTCCAACTTCTTACCCTTTAAACTTTTGAATTTCAACCTATGCGTTTACCCGAAATCAAAGTTATATTTCCATTTACCATGGAATTGAGCTCCTGAATGCATAGCCTTAATGGGCCTTGGTTACCTTACACACTAAATGTCCTTGTCTTTGAGCATAAACTTCTTTATTAACACCAAAATCCTTACTAACTCATAATGAATCTTCAACGCATGCTGTTCACACCCTAAGGTTCTTTGACTTCTCTTTTCTTTCTAGTTTAACACCCTAAAAAACCAGTCCTATAACTTGTTGATTTCCAAGACTAAGTGTGAGCCATGCGTTTCCTCTTTTTCCTAATTCTTGTTTCCCTTTTCAAAATTCAGTACCAAATTCCCTCCAAATTAAGGTACCACGCTTTAGCGCTTACCATCTATGTATTAACCGAACTATGCTCAAGAATACATCTAAATTTTAACTAATCTCCAAACTATGCTTTCAATCCTTCATTCTCACTCTTAATGGAATATCCATTGTTTTCCTAATATTAGGCGTTCAACTAGTCTTACTTCTTTTCTTACTTCTTCTCTTACTAGCCATCTTAAGAATTCTGAGTTAGGGTCTTACAGTAAAGAAATTGTGTAGCCGAGCCAAAGCATGAAGGTTGAAGTGTTGGCTTGTTGGGGGGTGTGTCCAATTTGCTATCCGTTGATGATGTTGTTAGATCAGCAGCTATGCGTTGGTTGAGTTTCAGTAGGGAGATTGCGTTGGCGTTGGTGAAGTATGAGTTCAACGGTGCTACGATTCAGACGCATGGTGCGATGCGTCCAAGCTAGCGTCCAGACTTGCGAAGCGTTCAAGCTTGCTAGGTATTCAAGCCAGTGTCCAAGTATGTTATCGGTTGCGTTATTCTATTTGGCGAGAAATAAAATAAAATAAAATAAAAGAGAAAGTGGAGATAAGTCGGCAGTTTGTTTAAATGTGTTAAGCTAAGTTTTCAATCATTTTCTTCGTCTCAAAAGCTCCAATCGATCTCATATTTTGGTTGAGCAACGAAGAGAGATAGAGGAAGGAGTCTAGGGCAAATTTGTGCAGAATTCTGATCGATCTTGTTGTGTAATTGGAGCTAGAATAGAAGGGTTGATTGCTGTCGTGCAATCTGAGCAATGTTCGGTATTTGGGAAATAGCTTCTTGTGGAGATCGAGTTTAGGGCTGAGAATTTGAGGTCGGTAAGTTAACTCAATTCTTAGCAACTTTTATGAAGGGTGTTTGAACTAAATTTGAAGGAAAATATGTGAAATTTATGGTGAAGGTGACTGATACAGATTTGCTAAGCAATTTGGAGCAGCTCGAAGTTATTTGTGAACATCTATCAAATGAAGGGAAGTTATGTTCTGAAATTTTGAGGTAAGCTAGGAAATACATTTGTTTACAAGTTTATAGAAGGGAAGAAGTTCTAAATTTGGCTGGAAATATGATTTGTAACAGATAGAAGTGAGAATAAGAGGGAAGGCAGAAGCTGCGGAAGATAAGTATCGCTGGACTGCAAGTAACGCTAAGAGTTTAAGCGTGAGAAGCGAGATGCACAGGTGTCATTAGAAGCCTTGCGTCTCACAATTCTTACTGGGTATCGCTGGGTCTCACTGATCAGGTGAATGTCGGTAGTCTTGCTCACCCTGGTATCGCTAGTGCTGTGTAGTGTAGTCCAGTCTCGCTAGTGGTCTCGCTAGCAGAGTTGAATCTCGCTCATTAAGGTTTATTGATCAAATATGAATGGTTAAAGTTTGTTGGTTATCGAAAGGAAGTTTAGGGAAGTCTAACCCAAGAAATGTGTATTTTCAAGCTAGGAAAGGCGTATAATCCGCTCAAGGCCTAGGATAAGTAGTGAGTTACACTTTTCTTCTTAAAAATGTTTTCATTGAGATGGTGTAGCTCGAATATTTTATGATGATATGAAAGCATGATATTATGATTGAAACTTCTGAGTTTTATGTGCATAGCTTAAATTTATGAAAAGCATGCTATTTATTGATTAACGAAGTTATGAAAAGCATGCAGACGATAATATATGATTTTATGAAAGGTTTGGGAAATGTGAAACTTATGAATTTATAATATGATGTTTTCAAAACATGTTGAGTATTTGTAAAAATCTTTGAAATGGCACCCAAAGTCCAGGGACTTGGAGAAGGCCAATGGGTAGCCTGAGTATAGAAAATGTACCAACGTTGAAGGACCCGAAGAAGGCGAATGGTAACCTAAACATAGAAATAGGACTCCAATGTCAAGGACTCGGAGAAGGCATAAGGGCAGCTCGGGATAGGCAAATGGTAACCTAGATATAGAAATGGGACCCCAATGCTCAAGGACTCGGAGAAGGCATATGAGCAGCCTGGATTATGATACCTAAGTGTATATTGAGGAACGTACGACGCTGATTTGTTGAGATTACTCCACACAGCTAAGGATAATCAATGTTGAGTAGCGTTGAGCTCCGATCCGCCTCAACTAAGGAAAATGAATTGAAATCAACGAATCTTTCTTTAGTATCTTTTCCTGAAATGAGCATGATTTATATGACTATGATTTATATTGAGATTTTATACACTTAGAGTTTAAATGCTTTTACTATGACAGTTTTCGAGCCAAAGAGGTTTTACAAAACTAGTCACTCACTGGGCAAAATAGCTCATGTTTTCCTTATTTTCTGTTTTTCAGGAGCGAGCGAGTCTGAGGTGCTTAGCTTACGCAAGATCTCGTATGGATCTATCAACGGTCTTTAGTATTCTAAAAAATTGTAAATATTCGAACTAGTTCATGTGTTGTACATATAGAGAGTGTTAAGGGAATTATTGTGTAATCATGCTTCCATATGACTGAATGAAAAGGATGTGCGTTTGCCAGGTTGATTGTAGTATATATTGAAGTAGTTTATGGTTATAACTATTTATTAGGAAATTGCAGAGTTTATTTGGATGTCGTAAGAGGGTCGATGTCCGCTATCATCATACTTCTTCCTGGGTTAGGAGGGTACCTGGGAGGGGTGTGACATAGCTAATCGATTCAAGTAGCAATAGTTAACTTCTCGAAAGAGTAAGTGACTATGGAACTCACCAAATAAAGTAAGTAATATCTTTAGACATCAAGAAAACCTTATCTTCAAATAACTTTTAAGCATGCATCAAAGAGATATGATTAATGTGGCTTACTCGTTGAAAGGTGGAGTTTATATTTGTGGTTAAGAACATGAACCAAAGCTTGTATCTAAGTTCTTCTCCACTGCTTTTTCGTACTTCTCACTCTTGCTTGCTAATTATGTTGGGTATCACATGCACTCCATATACACATTCATCGCATCATCCTTTACTGCTTTTTAGTTACATATTGATTCCAGACTCGCATATTAGTTGATACAATTCTTGAGAATTATCTCCTAAACCATTTTTACGTTAGTCGAATCCACAAAATCTCCATGTTTGATCTTGGTCCTCGTTAAGATTAAAACTTGATTAAGTTTATACTTGAGCTTATTAAGGAAAAAATTGAAAAAAAAAAAGAAGATTAAACCCAGTACATGTATAGGATTAGAAACAACAAGTTTTTGGCTCTGTTGTCGGAGATTTTCCAATAGATCCAACTAATTTTTTCTTTGATTTTACTTTTTATATTTGTACGTACATCTTCAATTAAGGGAGTATAGTAAATATTCGTTGGAAAATTCCAAACAGTATATGAGCAATGGTATAACATCGAAATTCGATATTGAACCAAGAATTGAATGAACCTTCCATCGAAAGGCAAGAACAAATTAGCATAGACGACAATGGATTAGAAATATGACCGACCCACAAAATAATCCAAATGTCAATACGCAAAACTAGCTATAGAACAATCCCAATGCACGAAAGGTGGCTAATTAATAATATTGTCAATGATGCAGCCAACGATGAGAATGTACAAACAAATCACATACTCCTTGCACATGATAGAAACAAACCTAGCGGGAGCATGTCACTGAATCTGTACAATTTTTAACAAGAAATCATGCGTCTAGATCTTGATGGACCACGATTTGAAATGAAGCCTATAATGCTTCAAATAGTTCAAACTACTAGCCAGTTTGGAGGAGCTACTGGCGAAGGACCCATGCACATCTATAGAGTTTCATGGAAATTTGTAATACATTTGTGATCCTTGGGATCACCCCACAGTCAATTCAAATGTCATCTTTTCCATTCTCCTTCAGAGATGAAGCGCGTTAGCGGGCGTACTCCTTTAAGCCTGGCGAGATCACCACGTGGGAACAAGTGGTGGAGAAGTTTATGTTGAAATACTTCCCTCCAACAGTTAATGCAATGTTGAGATTTATGCCCTAAATCTTTGTAGTTAATTAGTTATTTGATATAATAAACTATTATTTTAAATATTCAATAACAAGTTATCCATTACAGGAAAAATCCAAGGTTATTTCATGAGACTTGAACAGTATGTAGTAGACATATAGGTGGATAATGTTCAGGCAATTGTTTGGATGTATGCCCCTAAGGCCTCGTAATTAATAAGTTCTTTGAAAAAAATAGTTGATTATTTTATATATATGCAATTATCCTTTAAGGAAAGACCCAAAGTTATTTTATGTAACTTAAATAGTATGTGATAGACATACAGGTGGATTATGTTCAAGTAATAACTTAAATGGTCTGTAGTATATAGATAAGGTTGAGTGTCTTATCCTGGTGACACTATAGATACCATCAACTTTGTCAATGTTATAAGAGTTGTAAGTGTTACAAACGATTTTTTTACAAATCGTGCATGTGGAGACATGCGAGTGGAGGTGTCCTATACAAAGGGTTTATATAAGACCGGACCGAAAAATGATTAATCTCTCATTATAAAATCGTGGACTGAAGAGATTAACATTTTATAGGATGACCATAAGTAACTCAACCTCAATCTTGAGTGAGTTACAAACTCTTGTCTATCTAGGCAGTTCTATAAATTTGTATGGGTGAGAGTGGTTTGACTCATCGACTCAATAAACCTATTATTTTGGGGATTTGTCCAAGTAGGAAGCTGGGAACATTGCTACATAAGATGAAATTTACTCATTCCCATTTTTAGGTTAAGTAGATGAATTGCTCCTTAAGTGCTGACTTCGAGTCTTGAACAATGGGGCCCCTCCTTCTCACTGGCCTGAGAAGGTTTTGTTTATGAAAGGACCATAAATAGGCTGTTAATTAGATGATCAATCAAACTTAAGGAGTTAGTTGTAACTATAGGGGTAAAATGGTAATTTGACCGAGTTGTAATTACGAGCGATTTGTTGTTGATTGGTTATATCTGTGGATATAGAAATATATATATAGTGCAAACAGTGCAGTTGTGGGTCTTGAGTGAAGTGATATGCAGTTGATGGATGTTGATTAATTTAATTAATGATTTTAATTAATTAATCTGGTATCATTGGAGCTTCTAATATGTAGGTGTTTAGGTCTCCTTACTAGCTCTCTAAGGATAAAACAAAGAATAATTTTTTTTTGGAATAATTTGAATTGTTCAAATTATTTAAGGAAAATATAATTATTGGTTATATTAATGTGATTAATATAAAGTATAATGTACATTGATAAATTATAGTATATAGTTAATCATAAATATGATATTCATCATATTTATGATTAACTATATACTATAATTTATCAATGTACATTATATTTGAATCAATTTTATTTGAGGACTGGAATTAATATTGTGAGTTAAGGAAAATATAAACCAAATAAGGAAAGTAATAAAGTGAGAAATACAAGAGTCAAAGAGAGTTCTAGGGTAATGAATCCTTATTTATTTCATCATGCAATATTATAGATTTCATGGATTTTATTGTCATTCATATGCCTAAGTCTAGAAACTTAATTCCAAGTTATTTTCTCTAAAAAACAACCCTTTCTCATGCAACTCGATTGAATACTAATCTCTTGAAACCAATACAAATTACATATTTTTGCACAACAGGGTTATGAAAATCCATGAGAAGCAACCGGCCGTATTGTCTGCGCCAACTGCCATTTAGCTAATAAGCCCGTGGATATTGAGGTTCCACAAGCGGTACTTCCTGATACTGTATTTGAAGCAGTTGTTCGAATTCCTTATGATATGCAACTGAAACAAGTTCTTGCGAATGGTAGAAAGGGCGGTTTGAATGTGGGGGCTGTTCTTATTTTACCCGAAGGGTTTGAATTAGCCCCCCCCCCCGATCGTATTTCTCCCGAGATTAAAGAAAAGAGGATAGGCTCATTACATTCAAAAAGATATATGGGAATTTCCCAGAAATAA

mRNA sequence

ATGATTTGTACTCGCATATTAGTTGATACAATTCTTGAGAATTATCTCCTAAACCATTTTTACCCCGTGGATATTGAGGTTCCACAAGCGGTACTTCCTGATACTGTATTTGAAGCAGTTGTTCGAATTCCTTATGATATGCAACTGAAACAAGTTCTTGCGAATGGTAGAAAGGGCGGTTTGAATGTGGGGGCTGTTCTTATTTTACCCGAAGGGTTTGAATTAGCCCCCCCCCCCGATCGTATTTCTCCCGAGATTAAAGAAAAGAGGATAGGCTCATTACATTCAAAAAGATATATGGGAATTTCCCAGAAATAA

Coding sequence (CDS)

ATGATTTGTACTCGCATATTAGTTGATACAATTCTTGAGAATTATCTCCTAAACCATTTTTACCCCGTGGATATTGAGGTTCCACAAGCGGTACTTCCTGATACTGTATTTGAAGCAGTTGTTCGAATTCCTTATGATATGCAACTGAAACAAGTTCTTGCGAATGGTAGAAAGGGCGGTTTGAATGTGGGGGCTGTTCTTATTTTACCCGAAGGGTTTGAATTAGCCCCCCCCCCCGATCGTATTTCTCCCGAGATTAAAGAAAAGAGGATAGGCTCATTACATTCAAAAAGATATATGGGAATTTCCCAGAAATAA

Protein sequence

MICTRILVDTILENYLLNHFYPVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDRISPEIKEKRIGSLHSKRYMGISQK
Homology
BLAST of CcUC01G012000 vs. NCBI nr
Match: ATL60204.1 (cytochrome f [Deppea grandiflora])

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPEIKEK IG+L  + Y
Sbjct: 125 ISPEIKEK-IGNLSFQSY 140

BLAST of CcUC01G012000 vs. NCBI nr
Match: ATL59178.1 (cytochrome f [Posoqueria latifolia])

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPEIKEK IG+L  + Y
Sbjct: 125 ISPEIKEK-IGNLSFQSY 140

BLAST of CcUC01G012000 vs. NCBI nr
Match: ATL62858.1 (cytochrome f [Steenisia pleurocarpa])

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPEIKEK IG+L  + Y
Sbjct: 125 ISPEIKEK-IGNLSFQSY 140

BLAST of CcUC01G012000 vs. NCBI nr
Match: YP_001671696.1 (cytochrome f [Carica papaya] >B1A948.1 RecName: Full=Cytochrome f; Flags: Precursor [Carica papaya] >ABY86795.1 cytochrome f [Carica papaya])

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 70/84 (83.33%), Postives = 75/84 (89.29%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRYMGISQK 106
           ISPE+KEK IG+L  + Y    +K
Sbjct: 125 ISPEMKEK-IGNLSFQNYRPTQKK 146

BLAST of CcUC01G012000 vs. NCBI nr
Match: YP_009752848.1 (cytochrome f [Baijiania yunnanensis] >QIT05920.1 cytochrome f [Baijiania yunnanensis])

HSP 1 Score: 132.5 bits (332), Expect = 2.1e-27
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPEIKEK IG+L  + Y
Sbjct: 125 ISPEIKEK-IGNLSFQSY 140

BLAST of CcUC01G012000 vs. ExPASy Swiss-Prot
Match: B1A948 (Cytochrome f OS=Carica papaya OX=3649 GN=petA PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.8e-30
Identity = 70/84 (83.33%), Postives = 75/84 (89.29%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRYMGISQK 106
           ISPE+KEK IG+L  + Y    +K
Sbjct: 125 ISPEMKEK-IGNLSFQNYRPTQKK 146

BLAST of CcUC01G012000 vs. ExPASy Swiss-Prot
Match: A8SEB6 (Cytochrome f OS=Ceratophyllum demersum OX=4428 GN=petA PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.2e-30
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPE+KEK IG+L  + Y
Sbjct: 125 ISPEMKEK-IGNLSFQSY 140

BLAST of CcUC01G012000 vs. ExPASy Swiss-Prot
Match: Q2QD76 (Cytochrome f OS=Cucumis sativus OX=3659 GN=petA PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.2e-30
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPEIKEK +G+L  + Y
Sbjct: 125 ISPEIKEK-MGNLSFQSY 140

BLAST of CcUC01G012000 vs. ExPASy Swiss-Prot
Match: A1EA21 (Cytochrome f OS=Agrostis stolonifera OX=63632 GN=petA PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-29
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAV+RIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVLRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPE+KEK IG+L  + Y
Sbjct: 125 ISPELKEK-IGNLSFQSY 140

BLAST of CcUC01G012000 vs. ExPASy Swiss-Prot
Match: A8Y999 (Cytochrome f OS=Lolium perenne OX=4522 GN=petA PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-29
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAV+RIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVLRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPE+KEK IG+L  + Y
Sbjct: 125 ISPELKEK-IGNLSFQSY 140

BLAST of CcUC01G012000 vs. ExPASy TrEMBL
Match: A0A803N815 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.2e-29
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFE VVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELAPPPDR
Sbjct: 241 PVDIEVPQAVLPDTVFEVVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPPDR 300

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPE+KEK IG+L  + Y
Sbjct: 301 ISPEMKEK-IGNLSFQSY 317

BLAST of CcUC01G012000 vs. ExPASy TrEMBL
Match: A0A803N8S8 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.5e-28
Identity = 70/79 (88.61%), Postives = 74/79 (93.67%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELA-PPPD 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPPD
Sbjct: 241 PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPPPD 300

Query: 82  RISPEIKEKRIGSLHSKRY 100
           RISPE+KEK IG+L  + Y
Sbjct: 301 RISPEMKEK-IGNLSFQSY 318

BLAST of CcUC01G012000 vs. ExPASy TrEMBL
Match: A0A4D6WIS7 (Cytochrome f OS=Alternanthera philoxeroides OX=381410 GN=petA PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-27
Identity = 69/78 (88.46%), Postives = 74/78 (94.87%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPE+KEK IG+L+ + Y
Sbjct: 125 ISPEMKEK-IGNLYFQSY 140

BLAST of CcUC01G012000 vs. ExPASy TrEMBL
Match: A0A7D7JGN0 (Cytochrome f OS=Achyranthes bidentata OX=384659 GN=petA PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-27
Identity = 69/78 (88.46%), Postives = 74/78 (94.87%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPE+KEK IG+L+ + Y
Sbjct: 125 ISPEMKEK-IGNLYFQSY 140

BLAST of CcUC01G012000 vs. ExPASy TrEMBL
Match: A0A515BLI8 (Cytochrome f OS=Siraitia grosvenorii OX=190515 GN=petA PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-27
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANG+KGGLNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPEIKEK IG+L  + Y
Sbjct: 125 ISPEIKEK-IGNLSFQSY 140

BLAST of CcUC01G012000 vs. TAIR 10
Match: ATCG00540.1 (photosynthetic electron transfer A )

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0

Query: 22  PVDIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGRKGGLNVGAVLILPEGFELAPPPDR 81
           PVDIEVPQ VLPDTVFEAVV+IPYDMQLKQVLANG+KG LNVGAVLILPEGFELA PPDR
Sbjct: 65  PVDIEVPQTVLPDTVFEAVVKIPYDMQLKQVLANGKKGALNVGAVLILPEGFELA-PPDR 124

Query: 82  ISPEIKEKRIGSLHSKRY 100
           ISPE+KEK IG+L  + Y
Sbjct: 125 ISPEMKEK-IGNLSFQNY 140

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ATL60204.12.1e-2789.74cytochrome f [Deppea grandiflora][more]
ATL59178.12.1e-2789.74cytochrome f [Posoqueria latifolia][more]
ATL62858.12.1e-2789.74cytochrome f [Steenisia pleurocarpa][more]
YP_001671696.12.1e-2783.33cytochrome f [Carica papaya] >B1A948.1 RecName: Full=Cytochrome f; Flags: Precur... [more]
YP_009752848.12.1e-2789.74cytochrome f [Baijiania yunnanensis] >QIT05920.1 cytochrome f [Baijiania yunnane... [more]
Match NameE-valueIdentityDescription
B1A9482.8e-3083.33Cytochrome f OS=Carica papaya OX=3649 GN=petA PE=3 SV=1[more]
A8SEB66.2e-3088.46Cytochrome f OS=Ceratophyllum demersum OX=4428 GN=petA PE=3 SV=1[more]
Q2QD766.2e-3088.46Cytochrome f OS=Cucumis sativus OX=3659 GN=petA PE=3 SV=1[more]
A1EA211.1e-2987.18Cytochrome f OS=Agrostis stolonifera OX=63632 GN=petA PE=3 SV=1[more]
A8Y9991.1e-2987.18Cytochrome f OS=Lolium perenne OX=4522 GN=petA PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A803N8154.2e-2988.46Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A803N8S83.5e-2888.61Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A4D6WIS71.0e-2788.46Cytochrome f OS=Alternanthera philoxeroides OX=381410 GN=petA PE=3 SV=1[more]
A0A7D7JGN01.0e-2788.46Cytochrome f OS=Achyranthes bidentata OX=384659 GN=petA PE=3 SV=1[more]
A0A515BLI81.0e-2789.74Cytochrome f OS=Siraitia grosvenorii OX=190515 GN=petA PE=3 SV=1[more]
Match NameE-valueIdentityDescription
ATCG00540.11.1e-2984.62photosynthetic electron transfer A [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002325Cytochrome fPRINTSPR00610CYTOCHROMEFcoord: 42..61
score: 75.0
coord: 62..82
score: 73.5
coord: 21..41
score: 84.27
IPR002325Cytochrome fPROSITEPS51010CYTFcoord: 22..105
score: 27.649717
IPR036826Cytochrome f large domain superfamilyGENE3D2.60.40.830Cytochrome f large domaincoord: 12..104
e-value: 8.4E-33
score: 115.8
IPR036826Cytochrome f large domain superfamilySUPERFAMILY49441Cytochrome f, large domaincoord: 21..91
IPR024094Cytochrome f large domainPFAMPF16639Apocytochr_F_Ncoord: 22..97
e-value: 4.1E-28
score: 98.6
NoneNo IPR availablePANTHERPTHR33288FAMILY NOT NAMEDcoord: 21..99
NoneNo IPR availablePANTHERPTHR33288:SF3CYTOCHROME Fcoord: 21..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G012000.1CcUC01G012000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0015979 photosynthesis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0031361 integral component of thylakoid membrane
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding