CcUC01G011910 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTAAAATTCTGGCAATCACACCAGGACTTGCCTTCGCTATTCAAAAACACGCCGGTTGAGGGTTGGTTTGATGAGATGAAGACTGGAAAAAAAGACCCAGGTCCAATTCCATTAGCTCAAAACCTATCTAACAGTTTTATACAAGTATGGAGGTGTTTACATAGATACAGACTTTATTGTTTTGAAGTCTTTCATGGGGTTGAAGAACTCAATTGGCGCAAAAAGCATCCACTTCTAGAGGAATTCATGGAAAATTTTGCATCAAATTTTGATGGGAGTAGATGGGGATATAATGGACCTTTTCTGGTCTCGAGAGTAATAGCAAATGTAGGAGCCAGAGCTGAACCTGGTTTCAACGTCACTGTACTGACACCATCAACGTGA ATGGGTTTAAAATTCTGGCAATCACACCAGGACTTGCCTTCGCTATTCAAAAACACGCCGGTTGAGGGTTGGTTTGATGAGATGAAGACTGGAAAAAAAGACCCAGGTCCAATTCCATTAGCTCAAAACCTATCTAACAGTTTTATACAAGTATGGAGGTGTTTACATAGATACAGACTTTATTGTTTTGAAGTCTTTCATGGGGTTGAAGAACTCAATTGGCGCAAAAAGCATCCACTTCTAGAGGAATTCATGGAAAATTTTGCATCAAATTTTGATGGGAGTAGATGGGGATATAATGGACCTTTTCTGGTCTCGAGAGTAATAGCAAATGTAGGAGCCAGAGCTGAACCTGGTTTCAACGTCACTGTACTGACACCATCAACGTGA ATGGGTTTAAAATTCTGGCAATCACACCAGGACTTGCCTTCGCTATTCAAAAACACGCCGGTTGAGGGTTGGTTTGATGAGATGAAGACTGGAAAAAAAGACCCAGGTCCAATTCCATTAGCTCAAAACCTATCTAACAGTTTTATACAAGTATGGAGGTGTTTACATAGATACAGACTTTATTGTTTTGAAGTCTTTCATGGGGTTGAAGAACTCAATTGGCGCAAAAAGCATCCACTTCTAGAGGAATTCATGGAAAATTTTGCATCAAATTTTGATGGGAGTAGATGGGGATATAATGGACCTTTTCTGGTCTCGAGAGTAATAGCAAATGTAGGAGCCAGAGCTGAACCTGGTTTCAACGTCACTGTACTGACACCATCAACGTGA MGLKFWQSHQDLPSLFKNTPVEGWFDEMKTGKKDPGPIPLAQNLSNSFIQVWRCLHRYRLYCFEVFHGVEELNWRKKHPLLEEFMENFASNFDGSRWGYNGPFLVSRVIANVGARAEPGFNVTVLTPST Homology
BLAST of CcUC01G011910 vs. NCBI nr
Match: KAG6596350.1 (Lactosylceramide 4-alpha-galactosyltransferase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027901.1 Lactosylceramide 4-alpha-galactosyltransferase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33 Identity = 86/156 (55.13%), Postives = 97/156 (62.18%), Query Frame = 0
BLAST of CcUC01G011910 vs. NCBI nr
Match: XP_022948708.1 (lactosylceramide 4-alpha-galactosyltransferase-like [Cucurbita moschata]) HSP 1 Score: 152.9 bits (385), Expect = 1.9e-33 Identity = 87/156 (55.77%), Postives = 96/156 (61.54%), Query Frame = 0
BLAST of CcUC01G011910 vs. NCBI nr
Match: XP_004137912.1 (lactosylceramide 4-alpha-galactosyltransferase [Cucumis sativus] >KGN58777.1 hypothetical protein Csa_001279 [Cucumis sativus]) HSP 1 Score: 152.5 bits (384), Expect = 2.4e-33 Identity = 85/156 (54.49%), Postives = 98/156 (62.82%), Query Frame = 0
BLAST of CcUC01G011910 vs. NCBI nr
Match: XP_016899682.1 (PREDICTED: lactosylceramide 4-alpha-galactosyltransferase [Cucumis melo] >KAA0044161.1 lactosylceramide 4-alpha-galactosyltransferase [Cucumis melo var. makuwa] >TYK24973.1 lactosylceramide 4-alpha-galactosyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 152.5 bits (384), Expect = 2.4e-33 Identity = 86/156 (55.13%), Postives = 97/156 (62.18%), Query Frame = 0
BLAST of CcUC01G011910 vs. NCBI nr
Match: XP_038903678.1 (lactosylceramide 4-alpha-galactosyltransferase [Benincasa hispida]) HSP 1 Score: 152.1 bits (383), Expect = 3.2e-33 Identity = 86/156 (55.13%), Postives = 97/156 (62.18%), Query Frame = 0
BLAST of CcUC01G011910 vs. ExPASy TrEMBL
Match: A0A6J1GA34 (lactosylceramide 4-alpha-galactosyltransferase-like OS=Cucurbita moschata OX=3662 GN=LOC111452297 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 9.1e-34 Identity = 87/156 (55.77%), Postives = 96/156 (61.54%), Query Frame = 0
BLAST of CcUC01G011910 vs. ExPASy TrEMBL
Match: A0A5A7TRE8 (Lactosylceramide 4-alpha-galactosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00900 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33 Identity = 86/156 (55.13%), Postives = 97/156 (62.18%), Query Frame = 0
BLAST of CcUC01G011910 vs. ExPASy TrEMBL
Match: A0A0A0LDG3 (Gb3_synth domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731870 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33 Identity = 85/156 (54.49%), Postives = 98/156 (62.82%), Query Frame = 0
BLAST of CcUC01G011910 vs. ExPASy TrEMBL
Match: A0A1S4DUL6 (lactosylceramide 4-alpha-galactosyltransferase OS=Cucumis melo OX=3656 GN=LOC103486309 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33 Identity = 86/156 (55.13%), Postives = 97/156 (62.18%), Query Frame = 0
BLAST of CcUC01G011910 vs. ExPASy TrEMBL
Match: A0A6J1I1U4 (lactosylceramide 4-alpha-galactosyltransferase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470132 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 4.5e-33 Identity = 86/156 (55.13%), Postives = 95/156 (60.90%), Query Frame = 0
BLAST of CcUC01G011910 vs. TAIR 10
Match: AT5G01250.1 (alpha 1,4-glycosyltransferase family protein ) HSP 1 Score: 99.4 bits (246), Expect = 2.3e-21 Identity = 62/155 (40.00%), Postives = 78/155 (50.32%), Query Frame = 0
BLAST of CcUC01G011910 vs. TAIR 10
Match: AT2G38152.1 (alpha 1,4-glycosyltransferase family protein ) HSP 1 Score: 95.9 bits (237), Expect = 2.5e-20 Identity = 59/155 (38.06%), Postives = 79/155 (50.97%), Query Frame = 0
BLAST of CcUC01G011910 vs. TAIR 10
Match: AT3G09020.1 (alpha 1,4-glycosyltransferase family protein ) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18 Identity = 56/143 (39.16%), Postives = 71/143 (49.65%), Query Frame = 0
BLAST of CcUC01G011910 vs. TAIR 10
Match: AT1G61050.1 (alpha 1,4-glycosyltransferase family protein ) HSP 1 Score: 87.4 bits (215), Expect = 9.0e-18 Identity = 54/155 (34.84%), Postives = 73/155 (47.10%), Query Frame = 0
BLAST of CcUC01G011910 vs. TAIR 10
Match: AT2G38150.1 (alpha 1,4-glycosyltransferase family protein ) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 50/146 (34.25%), Postives = 74/146 (50.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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