CcUC01G011780 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCAGGCCTATTTGTGACTTGTTAGAGTTTGTGGCTGGTAATTTTGATGAAACAAACTTTCTGCGATTTGAGGTAGCTTGCTGCGCAATATGGGAAGATAGAAACAAAGTCTATGAAAATTGTCTGTTGGCGCCGATGGGTTTTAAAGGTTGAGTGGATGATGATATTTTGAAGACAGGGAGACCATCTGTGGTTGGTGTGGATGGTCTGAGGCATGGGTTGAGGGTTGTTCTGAGTGAGGCTGTTGGTCATCTGAGACCGAGGGCCTGGTGTTCGCCTGCTGGTGGTTGGCTGAAGTTGAACGTTGATGTGGCTTGTCACCTTGATAAGCCAAGTGTTGGGTTGGGCGCTATTATCCGTAATGATTGGGGGGCTCTAATTGTAAGTGCAAGTGAGTGTTTGTCCTGGGTTTTTGCAGTAGAAGCGGGCGAGATCTTGACAATGTTTGAGGGGTTACGTTTGGTTGAAGCGTGTGGCTGTGCTAAT TCCAGGCCTATTTGTGACTTGTTAGAGTTTGTGGCTGGTAATTTTGATGAAACAAACTTTCTGCGATTTGAGGTAGCTTGCTGCGCAATATGGGAAGATAGAAACAAAGTCTATGAAAATTGGAGACCATCTGTGGTTGGTGTGGATGGTCTGAGGCATGGGTTGAGGGTTGTTCTGAGTGAGGCTGTTGGTCATCTGAGACCGAGGGCCTGGTGTTCGCCTGCTGGTGGTTGGCTGAAGTTGAACGTTGATGTGGCTTGTCACCTTGATAAGCCAAGTGTTGGGTTGGGCGCTATTATCCGTAATGATTGGGGGGCTCTAATTGTAAGTGCAAGTGAGTGTTTGTCCTGGGTTTTTGCAGTAGAAGCGGGCGAGATCTTGACAATGTTTGAGGGGTTACGTTTGGTTGAAGCGTGTGGCTGTGCTAAT TCCAGGCCTATTTGTGACTTGTTAGAGTTTGTGGCTGGTAATTTTGATGAAACAAACTTTCTGCGATTTGAGGTAGCTTGCTGCGCAATATGGGAAGATAGAAACAAAGTCTATGAAAATTGGAGACCATCTGTGGTTGGTGTGGATGGTCTGAGGCATGGGTTGAGGGTTGTTCTGAGTGAGGCTGTTGGTCATCTGAGACCGAGGGCCTGGTGTTCGCCTGCTGGTGGTTGGCTGAAGTTGAACGTTGATGTGGCTTGTCACCTTGATAAGCCAAGTGTTGGGTTGGGCGCTATTATCCGTAATGATTGGGGGGCTCTAATTGTAAGTGCAAGTGAGTGTTTGTCCTGGGTTTTTGCAGTAGAAGCGGGCGAGATCTTGACAATGTTTGAGGGGTTACGTTTGGTTGAAGCGTGTGGCTGTGCTAAT SRPICDLLEFVAGNFDETNFLRFEVACCAIWEDRNKVYENWRPSVVGVDGLRHGLRVVLSEAVGHLRPRAWCSPAGGWLKLNVDVACHLDKPSVGLGAIIRNDWGALIVSASECLSWVFAVEAGEILTMFEGLRLVEACGCAN Homology
BLAST of CcUC01G011780 vs. NCBI nr
Match: XP_017256273.1 (PREDICTED: uncharacterized protein LOC108225829 [Daucus carota subsp. sativus]) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-07 Identity = 42/149 (28.19%), Postives = 65/149 (43.62%), Query Frame = 0
BLAST of CcUC01G011780 vs. NCBI nr
Match: XP_031091124.1 (uncharacterized protein LOC115996122 [Ipomoea triloba]) HSP 1 Score: 66.2 bits (160), Expect = 2.6e-07 Identity = 45/134 (33.58%), Postives = 61/134 (45.52%), Query Frame = 0
BLAST of CcUC01G011780 vs. NCBI nr
Match: XP_015382596.1 (uncharacterized protein LOC107175573 [Citrus sinensis]) HSP 1 Score: 64.3 bits (155), Expect = 9.7e-07 Identity = 38/129 (29.46%), Postives = 57/129 (44.19%), Query Frame = 0
BLAST of CcUC01G011780 vs. NCBI nr
Match: XP_019158163.1 (PREDICTED: uncharacterized protein LOC109154880 [Ipomoea nil]) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-06 Identity = 39/119 (32.77%), Postives = 56/119 (47.06%), Query Frame = 0
BLAST of CcUC01G011780 vs. NCBI nr
Match: XP_017251150.1 (PREDICTED: uncharacterized protein LOC108221805 [Daucus carota subsp. sativus]) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-06 Identity = 35/121 (28.93%), Postives = 54/121 (44.63%), Query Frame = 0
BLAST of CcUC01G011780 vs. ExPASy TrEMBL
Match: A0A2I4GDA3 (uncharacterized protein LOC109006907 OS=Juglans regia OX=51240 GN=LOC109006907 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06 Identity = 39/129 (30.23%), Postives = 62/129 (48.06%), Query Frame = 0
BLAST of CcUC01G011780 vs. ExPASy TrEMBL
Match: B9RYQ2 (zf-RVT domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_1312540 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.8e-06 Identity = 42/145 (28.97%), Postives = 64/145 (44.14%), Query Frame = 0
BLAST of CcUC01G011780 vs. ExPASy TrEMBL
Match: A0A7J7G0B6 (RNase H domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_030294 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.3e-06 Identity = 40/133 (30.08%), Postives = 60/133 (45.11%), Query Frame = 0
BLAST of CcUC01G011780 vs. ExPASy TrEMBL
Match: A0A2P5E8B2 (RNase H domain-containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_223890 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.3e-06 Identity = 43/144 (29.86%), Postives = 65/144 (45.14%), Query Frame = 0
BLAST of CcUC01G011780 vs. ExPASy TrEMBL
Match: A0A2P5EP22 (Ribonuclease H-like domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_169220 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 4.0e-06 Identity = 45/136 (33.09%), Postives = 65/136 (47.79%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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