CcUC01G011020 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G011020
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribosome biogenesis protein BRX1-like
Location	CicolChr01: 17004343 .. 17017474 (-)
RNA-Seq Expression	CcUC01G011020
Synteny	CcUC01G011020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGTATGAATGATTCCAAATTGAGGGGTTCCAACAGGGAGTGAAGGTTGAGATTGTTGGAGGGAAAGAGTGTTGTTGTGCCGCCTGCAGCTGCCGTCGCCGATAAGTGAGCTTCTCCTTCTCGGTTCCTGCTTCCTTTTCCGTTACTTGGTTGCCTCTCAATCTCTCTCTCAATCTTTACAGATTTCTTTAACCTCTGTTACTCGATTTTATGTGTAGTATTTCTGAAGGGGTGATATTCTCAATGGTGAAGAAGAGAAAGCATAGCGAGACTTTTCCAGCAGTATCAGTTAAGAAGAATGATGCTGCCCCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAAGAAAAAGAAGTCGCAAAACAGAGTGATTCTGCTTCTGATCATCCTATTTTTCGAAATAAAGAGAAAGTTCTTGTTACTTGTTCCCGTCGAATCAATTTTAGGTACGAAATATAGGCACAGCCACCACAATTTGAGTTTTGTATACTTACATTCCAAACATGCGCACTTGAGTTATTTTATTTTCTTGTCTCTTCTGGTACAAGTTGTCTTGATGTTCTAGACTTGTTTTATTTTAAATGTAATCTTTAATTCCATTATTAATTTAATAACATGATTGGTGGTGTTGAAGGAAGGAAGAAATGCCAAAGTCCTTGTAACTATATTTCAAAAACCATAACATGAAGAGGTTTTTAGGTGAAAGTTCGACTAGGTACAAGCGTGTGGATTTGGATGGAGATGTGGTTTAAGGATCAATAATTGATGAAGAAATTCTCTTGTCTCTTTGTTTGTTTCTCAACTAAAGGACATCTGGTAAGCGATATAACTTAGGAAAAACAGAAATATAAACAATTATAACAACGAGACCCCTATCAAATGTAGAAGCTAATGGATATCGAGATTTTGTGGTCTTCCTCAGTGGTGTAATTGTTCGTAGGATTGAGGATGTGAAAGTATGGGAAGTTGGATCTCTGGGGTTGTTTTCAACTATTAAAGCTAGCAGGTTTTAAAGGAATTGTTAAATTTTTGATTAACTTGGAAGGATCTTGTACCAAAGAAGATAGTTTTTTCTGCTAGCCTACTTGAAGATAGTTTTTTCTGCTAGCCTACTTGTTTTGAGTAATATATAGCTGATAGGATGCAAAAGAGAAGTCTTTATGGTGAATTTGCTGTTGAGTTGCTGTACTTTGTATAGGTAATCCGGAGACTGGGATGTCTAGTGTTTATTGTACTTGTACTTTGTAGTATGAAGTTCTGGCACTCTTTATGTAGAGTACGGATTTCCCTGCAAGAAGAACATGATTCAAATGCAATGTGGAGAAGGTTTGAGAGGAAAAAACAAGAATGATTTTGATGTATCAAAGCTTTTCATGGCTATGCAATGAGAAAGAAGTAGTTGTAGGATATCAGATGGTAAGGATATATATTGGGAAGAAGCCTTTTGATTTGGACAAATTTCAATGTTCCTCTTGGTACACTCTCTACACCATTCCACAATTATTTTGTTGAAATAAATTAGTGTGGCTTTTTGTAAAATGTATTAAGAGGTATGTACAGGGTCAGGTAGTTTGTGATGTAACTTTTCACTCATCAATAAAAACTTTTCTTCCTTTAGAATGACTGGCAATTTTGTTAACCTTTGTGATTGATTAGGTATCGACATTTGATGTTGAATATAGTATCACTTCTGCCACATTGTAAGAAAGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCGACACTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGGTTAGGGCTTTTATTTTGCACCGTCCATGTCTAAACTTGAAATTTAACTCATAATCTGGAATTTGTATAGTACTAGGTAAGATTATAATTTTTTGGCTTTGTGGTGTAAGGATGTATTAAATTTCCTTTTGTTTTCATTCTATTACTATCCTACATTTCTTTTCATCATGTTTGTACATTGTGATCACATTTTGTTTTTCCACTTATTTTGTTACAATGACTTTGAATTCAATTTGTGTATTTGGTTCTAAAGGGTTTTTTGTCCCCTGGATTTTGGTCTTGCACAGTCAAATCAATCATTTTATTTCCAAGCTTATTGCAAGATATTTCAATTCTTTTTCCTTTTCTTTCTTCTGTCATTATTTTACATTTTAGGTGATATATAGATATATAGGACTCGCTCAAGTTTACTTATTGATTGATCTTTTTGTCTCTACTTCCAGTGTAGAAAACATAAAGATCTCTATTTATGGATGGCAAAGTGCCCTAGTGGACCATCTGTGAAGTTTTTAGTAAATGCCGGTAATTTTAATGTGCAATCAAATCTTATTATTTGATTTCGAGCTGAAATTATATGGAATTTCTTAATCAAATACAGTTTGCTTACATTTCCATTCTTGTTTTCAGTTCATACAATGGAAGAATTGAAGCTTACAGGAAACCACCTGAAAGGTTCCCGTCCAATTTTGACATTCTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGGTAGCAATGATTTTTTTATTTCTTTTTTTTTTTTAATTAAAAAAAGTAATTGATTTTTTAAACTATTTTTCATTTTTTGGAAAAGGCAATGTATCTCACTAACAAATGAAGTGCGAAAAGGAGTTAACAGCTATTTGGGGGTGGTCGCTTCTTGTGGTTTGTCTGGGTGTGTGCTTTGTAGTGAGATAATTTGGGGGGAGAGAAACAATAGAGTGTTTAAAGGTGTGGAGAGGGACCCTAGTGATGTTTGGTCCTTGGTGTGGTTCCATGGTTCTTTTTGGTTTTTGGTCTCGAAGACTTTTTGTATTTTTTCCCTAGAGTTCATTTTACTTAGTTGGAAATTCTCTTTAGTAGGGTTTTTGTGGGCTTGGTTTTTTTGTATGGCCGTGCATTATTTCAATTTCTTTATGATGGTTTCTGTATATATTTTTTTCTTCGTAAATGCACATCTTTCGTGTAATACACTATGGCATAAGAATATGGATTAGTCAATACTTGTGTCCAATCTCACATTTTTATGCTGGTGCCCTAATACTGTCACTCTCCTTTTTTTGGCTGCCTTTATTTATTGCCTAATTAGGGTGGCCATATTAGTTTTATTTTCTGTGTATTTACGATGTCGTGAAAAGTAATTGTAGATCCTAGTTGCTTCTCCAAATGATGACATTTTTTCTACAAATCCTTTGTTGTCTCATTTTAATTTGTCATAATTCTTAACTACCTTTTTTCCCCCTCAGATTTTTGGAACACCAAAGGAGCATCGACATTCTAAACCATACCACGATCATGTATTTGTTTTCTCCATTGTAGATGACCATATATGGTTCCGAAATTACCAGGTATGCTTTCTTTATTTTTTACTTGTTACATTATTTAATGATCTCAATTGTGGGTAGCATCCAAATGCACAACTTTCACTGACACCCAAATCATCATGTAATGGATGCAATCCTTTCTTTTAAATGTTTTCTAACCGCTTTTTTTCTATTCTCTTTGTTAGGCAAAGACATTGGAAGGAATTTTATTTTAGGAAGTAGTTTAGTACAAAGTATAAAATATTTGTCATGATATGATGATGATTACATACTAACAATTCAGAGGAAGACTAAGTTAAGAGCTTGGCCATGAGGACATCTTGGAGCCGCAGAAAGATGCCTAAACCTCTTGTGAAGAGTCACAATTATTGTCCAATAGCTTAGACTTTTTATATATATAGTTGGTATTGGAGATCATAGTCAATAAATGACTAAGAGGTCAAAGGTTCAACCCATTGTGGCCACTTACCTAGGAATTAATTTCCTACCAGTTTCCTTGACAACCAAATGTTGTAGGGTCAGGTGGGTTGTCCCGTGAAATGTTGTAGGGTCAGGTGCGTGTAAGCTGGCTTGGATACTCACGAATATCAAAAAAGAAAAAAAGAAAAAAAAAAAATATATATATATACATGATATTGAGACCAGGAACGATGGAACAAGCAAGAATGAGATAAGGTTTCCTATTCAAATATCTCGAGAAACTTCGAGTCCAATCTTGGTTTGCCATTGGTTTTCATCTAGGAAATTCTAGTATAAGCTCCTTGGTTGTTAGGCAACAATTGATCTACAGTAAGGTTATAGTTGAGCTTTACTTATGGCAGTGAGATGTATTTGAAATGAGCTAGTTATACAAGGAAAGGGTGGGGACAAGAAAAGAAACAATTATTTTTCATGTGGTAGGTTATGCATGGAAGAGTGAACTAACACCTTGGATCAGATATTAGCCAGGGAGTCCTCTTTGGTTGGGTTGCTTTGTTGGATTCTTTGCAGAGGGCAGCAGAAGACCTAGATCATTTACCCTAGATGTTATTTTGCCTAGGTTTTGAAGTTGTTTCTTTGAGACATTCAGCTTTAGTTTGGTTCGCTTTTAGAGTTGCAGAGATACTTTTGCAGGGCTGCTTCTTTACTTGATTTTTGTGAAAAAGGGTTGTTTTCATGGTAGGCTGGGATTTGTTCCATTTTGTTGGGCTTCTGGTGCGGGAAACAGTAGAATCTTTTGGAGTTTTAAGAGACCTTATAACAATTTTTGGTCCCTATTTAGGTTCTACGTTTCCTTATGGGCTTGGATGATAAGGTGTTTTGGTAAACTACTCGCTAGGTCTTATTTTATTGGATTTAATGAAAAGAGAGTAGGAAATAACACAAAGATGTACGTGGAAAACCCTAGAGCAGTGAGAAAAAATCACGATAAAACTTTTTTCTTTTTATTTCAGTTTGATACATTACAAACACTACAAGGATAAGAATAAATAGAGGTAAAGGACAACTTATACAAAGAAAAAATATTTGGAAAAGGAAAGACTTAATTCCACAATATCTCCCAAAATAATTTCCCTTTTTATTTTCAACACTCCCCCTCAAGATGGGACGTAAATGTCAATAAGACCCATCTTGCTTACACATGCATCAAAGCTCTGCTTAAGCAACCCCTTAGTAAGAACATCTGCAACTTGTTGGCTGGAAGGAATATAAGGAATGCAAATGCTACCGTTTTCCAGTTTCTCCTTTATGAAGTGCCTATCGATTTCCACATGTTTTGTTCTATCATACTGAACATGATTGTTTGCAATACTAATAGCAGCCTTATTGTCACAATAGAGTTTCATAGGTAGTTCACTGCTTTGGTGAAGGTCAGATAGAACTTTCTCCAACCAAATTTCTTCACAGATTCCATGGCTCATAGCTCTATATTCTGCTTCAGCACTGCTTCTAGCAACCACACTTTGTTTCTTACTTCTCCACGTTACAAGATTACCCCACACAAAGATGCAATACCCAGATGTAGATTTTCTGTCAATTACTGATCCTTCCCAGTTAGAGTCCGTATAGGCTTCAATGTATTTTCTGTTGGATTTTCTAAACATCAACCCTTTTCCAGGTGTGCTTTTCAAATATCTCAGAATCCTGTTTACTGCTTCCATATGTTCTTCGTAGGGAGCCTGCATAAACTGACTCACAACACTAACAGCATAGGATATGTCTGGTCGAGTGTGTGCTAGGTATATTAGTCTTCCAACTAAACGTTGATATCTCTCTTTATTAACAGGCATTTTGGTGATAGACTCTCCCAATTTGGCATTAGACTCGATAAGGGTGTCGGCGGGCCTGCATCCAGTCATACCTGTTTTTTTTAGTAGATCAAGAGTGTATTTCCTTTGAGAAACTGAGATACCTTCTCTTGATCTTGCCACTTCCATCCCAAGAAAATACTTTAGATTTCCTAGGTCTTTGATTTCAAATTCGTCTGCCATTTTCTGTTTTAACTTGTCGATTTCAGCGGTATTATCTCCAGATAAGACGATGTCATCAACGTATACGATTAGAACGGCCACCTTTCCCTAGGCAGACCTTTTTGTAAATAAGGTATGGTCAGAGTGTCCCTGAGTGAAGCCTTGGGACTTAACAAAGGTGGTGAATCTCTCAAACCATGCCCTCGTTGACTGTTTTAATCCATACAAAGCTTTTCTAAGCTTGCACACACATCGATTAAATTGGTCTTCGAAGCCAGGAGGGGAGCTCATAGACACTTCTTCTTCTAGATCACCGTTTAAAAAGGCGTTTTTCACATCTAGTTGATAAAGAGGCCAATCTCTGTTTGCTGCAACTGACAGAAGGACTCTAATTGTGTTCAACTTTGCGACGGGAGAAAAAGTTTCAGAATAGTCTACTCCAAACGTCTGAGTGAACCCTTTTGCTACAAGCCTGACTTTATATCTGTCAAGGGTTCCATCAGATTTATACTTCGTTGTGAATACCCATTTACATCCAACTGGTTTATGCCCTTTCGGAAGAGCAACAAGTTCCCAAGTATGATTTTTCTCAAGAGCTCTCATTTCTTCCATAACGGCAGCCTTCCACTCAGGGATTTCCATAGCCACATATATGTTTTTTGGTATGGTTATAGTATCAAGACTAACAGTAAAGGCTCTGAACTTAGAAGACAAATTATTATAGCAGAGGAAGCTATACATAGGATACCTGGTGCAAGATCTTGTGCCCTTTCTCAAGGCAATGGGCAGGTCTAGACTGGTATCACACTCTCCTGGCTTGTCGAGTTCTTCTCCAGTTGTAGATAGACTGGCATCACACTCTCCTGGCTTTTCGAGCTCTTCTCCAGTTGTAGGATTTTGAGATATGATTCCTTTTTCATTCTCCTCAACTGTTGTTGACACTCCATCGTTTTCAGTAACTTGGTTATTTTCTGTCATTTTATCTCTACCATCTTCTATCGGAAGTTTTGTCAAGTCTTCATTATCATTTTCAACACAACTATTTTCCGCACAAATAGTATTGTTACCAGGATAAGTGGTACCTTGGGCTTGTGTCGGTTCAGATGATTGGACCGGAGCCGGCATATGATCAGTAGGGTCTGCTATTTTCTTTCTAAGATTCTTCTTGTAGTACATTATCCATGGGACCTGTCTGGTGGGTAGGACAGTGTCATGGGTTGTGTTGCCAGTGTAGGTTTAGGAAGAGGATTTGGATAGTTAGTCTCTTCATTATTACTCTCCCCCTGAAGAGGACTAATGGGAAAGAAAGATTGATCTTCCAGGAAGGTTATATCCATAGAGATGAAGTATTTTCGAGAGGTAGGATGGAAACATTTATAACCAAGCTGGTGGAGAGGATATCCAACGAAGACACATTTCTGGGCTCGAGGGGAGAACTTAGTCTGGTTGGGACCAAAGCTATGGACAAATGCTGTACACCCAAACACTCGGAGAGGGACATCAGGTATAAGGCGAGTGGTAGGATAAGATAGTTTGAGGTAATCAAGAGGGGTTTGGAAATGGAGAACACGAGAGGGCATCCGATTTATAAGATGAGTTGCAGTTAATATTGCATCTCCGCATAGGTAAGATGGAAGAGAGGCTGAAAGCATGAGAGACCGAGCAACTTCGAGGAGATGACAGTTTTTCCTTTCAGCTACTCCATTTTGTTGGGAGGTATAGGCACATGAGCTCTGGTGAACGATACCTTTGGTGGATAAGAACTCTCGAAGGGTATTAGTGAGGAATTCACGACCATTGTCACTTCGAAGAATGGCAATCTTGGCATTAAACTGAGTTTTAATAGTGGTGTAAAACTGTTGGAAAATGGATGAGACCTCAGACTTATCTGTTAAGAGGAAGACCCAAGTAAGACGAGTGTGGTCATCAATGAAGGTCACAAACCAACGCTTACCCGAAGAAGTGGTAATCCTTGAGGGGTCCCAAACATCACTATGAATCAGAGTGAAAGGTTGAGAGGGTTTGTAAGGATGAGACGGAAAGGAGACTCTATGTTGTTTGGCACGAATACACACATCGCAAGATAAAGAGGAGATATCAACTTTATTAAATAAATGGGGAAATAAATATTTCATATATTGGAAATTGGGATGGCCAAGACGAAAGTGCCATAACATACAGTTAGTTTCAGAAGTTGAAAAATAGGAAGATAGCAGACTAGTCCTATAACTTTGCCTAGAGGAAGTATCAGTATTAAGGACATAGAGTCCCCTATTGTGCCGGGCAGTGCCAATCGTCTTCCCTGAGTTCAAGTCCTGAAAAAAAACATCATCGGGTGAGAAAGCTACACGACAATTTAAATCTCGGGTTATCTTACTCACAGACAGAAGATTATACGAGATTTTGGGAACATGCAGAACATTCTCTAATATTAAACCATCGAAAGGAGAAATGTGACCCTTGCCGGCAACAGGGGCAAGTTTCCTGTCAGCAATTCAAATTTTTTCATTACTAGCACATGGATAATAGGAAAGGAAATTGTCAGAAGTTCCAGTCAAATGGTCTGTTGCTCCTGAATCAAGGATCCAGGGTTTCTGGCCAGTAACACTGAGTAGACTCAAGGATTGAGAAATACCTGAGTGTGCAATTGCCCTAAGAGAGGCGGTACTGTGGTCAGTTGGGTAGTTCTGTTGTGGTTGCGAGTCACTTGTTGTTTCACTTACCAGGACATGGTTAGGTTTGTTGTTAGGAGGTCGGCGTTTACCATTCGGGGGCCGACCATATAACTTCCAATACTGATCTTTCGTGTGCCACGGTTTTTTACAGTGTTCACAAACTGGAGGAGGTTTAGCATTCTGATTGTCTCCAGTTATACTAGCTGATTTTGCACTGAACGCAGATGAGTCAGACTTCCATCAAGTTCGGTGTTGGTTCCTGTCCCAATATTCGACTTCGCACAGCATCGAATTTGGAATTTAAACCGGCTAAGAAATCATATACTCATTCGAATTCCTCAAGTTTGTAGTACTGAACTCCCCCACAAGGACAATCCCAGACAAGTTCTCGACACAAATTCATTTCCTGCTAGATCAGAGACAATTTGTTAAAGTATGACGTGACATCCATATTACCTTGTTGACATTCGTGGATTTGTTTCCTCAATGTATAAAGCCGAGAGGCGTTCTGTCTTTTGGAGTATAATTTTTGAACCGCATCTCAAATATCCCGAGCTGTAGTAGCATACAACAAAGGCTTTCCAATTTGAGGTTCCATGCTGTGAATTAGCAATGACCGGAGTAATGAGTCTTCGCCCTTCCAGAGGCGCTCTTGAGGATCTCCAGGTCTGGGTTTAGGTATTTCGCCAGTCAAATATCCGAACTTATGGCACCCTTCAAGTACCATTTTAACGGATTGGGACCAAGAGAAATAATTCTGGCCATTCATTTTTTCGCCAACAATTAAGCTAGAAGGGTTACCTATTTGTCCAGACAGATACGGTGCAGTCGTTACAGTAGGGATTACAGCTACCGGATTATCTGGATACATCGGTAAATCTGAGGAAACACCTGAATTGACTGTACTTTGACCAAGATTAGAAGAACTCAAGGCAGCCCCAAGAGCGGCGATTTGTTGCTGAAAATTTGCTTGAAGGTCCACGACTTGTTGTTGAAGTGATTTTGTTGAGGCAAACTCCCCCGATCCAACCGGATTTGAGTAAAAACCACCAGATCTGGTCGAACCACCAGATCTGGTGGTAGCCACGGTGGTCGGAGGAAGGGTCGACGGAAGAGGCACCATGGTGGTCGGAATCACAGCGGCTTCGGGACTCCTCTGCTGCTCATCAAAACCCGACGATCGAAGACCTCTTTGCTGCTCGAAAAACCCCGACGAAGTGTTTCCCTCGACGATCGAAGAAGAACCGGCGGGGATGAGTGGCGGAAATCTCAGATCCGGGTTCGACGCGGGATGGCCGGTGGCGTTCTGGTCAGTTCGAGTCACAGTTCCAGCGTTACCTGGCGGTGGCAGTCGAGTCTGAGGGGTTGCGCCGCTAGGGTTTTGTGATGGTGGCGGCAGACTCTGAAAAAGGGCGGTGGCGGCTTCGGGGTTGAGCGACCGGAGGTATTGCTGGACGGCTGCCTCGGTGGTGGCGGCGGTGGACTTCATCGGCGACGACGGCAACGGCAGGTGAGATGGTGGATCTGTTCTAAGGTTATTTTCGTTGACGACGGCTAGGGTTTCTAGAGTTTCCTGCTCTGATACCATAATGACAAAGAGGGTAAGAAATAACACAAAGATGTACGTGGAAAACTCTAGAGCAGGGAGAAAAAACCACGATAAAACTTTTTTCTTTTTATTTCAATTTGATACATTACAAACACTACAAGGATAAGAATAAATAGAGGTAAAGAACAACTTATACAAGGAAAAAATATTTGGAAAAGGAAAGACTTAATTCCACAATATCTCCCAAAATAATTTCCCTTTTTATTTTCAACAGGATTAAAGCCTCTTTTTGTAGTTTTTTTTTCTGCTTAGCTACTCTTTTTTGTGGGATTATTTTTGGCATGTCCTTGTATTCTTTTATGTTCTTTTTCTTAATAAAAGCTCGGTTTATCATTTAGATAGAAACAATGCTGTAGCTTCAGATTTAATGACCAAGTTTTCACTTAGACAACGAACTGGGGTAGAAAAAGGAAACAATGCTCAAATTTTAGAGGTAATGACCAAGGCTTTATTCATAAAACAAGCAATGGTGGTGAACATACTTGAAAGAGATTATTTCCATTTCATGTATGACTAATGCTGGAACCCTCAACTTTCAAGGGTTTGGATGGTGATGAGAGGGTTTAGCACTTCGTCTAAGCATTATGGTCTCCAACTAACCTTTACTTAGTATATTTATTATATTTGTTCGCACTTGGGGTTTGTGTGGGTGTGTCATATTCCCCAGCCAACCATTACTTAGTGATATGGCGTTTGTCTTCTTTGTTTGGTGTGATCAGATAGCTGTTCCACATAATGAATCAGATAAAGTAGCTCGAGGAGGACTAGACAAAATGACTCTCATTGAGGTTATTAAATTTCCTCTTTCTTCTTAGTTTATAAATGAGTTTTTACCAATTTTTGGTTGGACTTCAAAGATTTGTATCTTACAGGTTGGCCCACGGTTTTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCGCTTTATGTATCGCCAAACCAGGTTAGATAACTCAACTTCTTCTATCATTTGGGATTACACTTCTTTCACTATGCCGTTTTAAAACCTGCATTACAGTATAATATCTGAGAGAGTATGTTAGGTATCTTTTTTTGAATTGGAAACAGACTTTTCATTGATATAATAATGAAAAGAGACTAGTGGTCATATTATAGAGAGACATACAAAAGGATCAAAAAAACATAAATAAGGATCAGTAGGTGCATTAAGCCATCTCAACTAGGTTGACACAACCCTAGCGCCATCATATCCTAAATCCAAACATCATCCGTAATCAATATATAAAGCTCGCTTAGTAATACATTATAAGATTTAATACATATAAAACACTATTAAACTGAAGAGAACGTATTCCAATTGAGACATATGTCTTGGGTGGAATAGTTGTCAAAGAATTTGGATTTTGAGCTCCATGAAGATGCGATCAGCCTTGCTGAACCAAAACGACCTGACGACTCAAATGTTTTGTTGTGAAATACTCTTCGATTACGCTCAAACCAAATTTATAGCTCTGACTGCATTATACCATAGTATTTGGGCTTTAGATGAGAGTGAGGGACCTCTCAATAATTGGGAGACATTATCACAGAATGAGTGTCCATACACCCACGCACATTGAAGTATGAGAACAGCTTCCACCAACACTTGCTAGAAAAAGGACAAGCAAAAAGCAAATGCTGTAGGTCTTCACTGCTTGCTAAACAGAGAGGGCAGATTGTTGGAGATAAATAATGGCCTTGAAATTTTTGTTGTAGAGTGGCTGAACAGTTGAGGGTGCCAAGCATCATAATCCAAACCAAAATATTTATTCTTTTGGGGCTTTATCTGAATACCCGTAACCTGCAAATCGATCGAAAACAAGAACATCTCCAACAGTAACTAATTCCACAGCAAGTCACAATGTGACAATATGCATTCAACAACGAAAATAAAGAAAACAGAGCAATAGAACAGTATTCCGTCAACTATTCGAGAGAGCTGGATCTCTCCAGAGTACCCTAACCTTGCACTGAAAAACATAAAGAACAACCCCTACAGATAATGCTAAAAGGCTATATAAACCTCCCAAGCCCAAAAGGATATTCTCCAACGTAGAACGGCCCTTCTTTGACGAGTAACTAACTTATAGGGAATGATTCCCTTTTTATCCCTCCTACAGTAAGTTTAGATAATGAAAGGCCTCACCGAGTACTTTTGCGTTAATTTTAAAGAAGCGACAAACACATTGAGGAGGCATTAGCAGTATGCTTTTACGGTTTTTCAACTCTTAAGTTCATGTTTTACAAGAGAATAAAAGAATTGGAACCTCAGAAAAATAAGAATGTCATTGCAAAGGCCAAGTATTCGTTATCTTTTTCAATTCAAGGTTCTTTGAGAAATGATCTGCTCGTCTAATTTATCATTATGCTTTCAAAATTGGGTTTTTATTCATGAAAACCATCACTGGTAAAAGGAGGACAATGAGTTTAATGTAAGGTCAACAAGCTATCTTGTGAGCTTAGTCGAAGTGTGCAGTGTAAGCTAATTCGAGCATTCATAGATATAGATGAGAATACTTATGATCTGCCAACAGTTAGAATCAAGTTCTATAATTTGAACTTTTAACAACTAGACATAGACTACTTGCTCATGTTTTTCCATGTCTCTCCTTAGATTCGAGCGTTGGAGAAAAAACAGAAGGCTGGAAGATACTCAAAGAAAGTTAAAGCTAAAACAAGGAGGAAGATGCATGAGTTATTGAATCCATTGGAACCGGACGAGTTTGCTGATATGTGGAAGGAATAGGTCTTTCGGCGGATTTCATTTAGTCTAGACTCCATTGAAGTTCCTTACCTCCAATGAAATGAGAATTTGTTCTATAATATTGTTGTTATCTATGGTGCAAATTTTGGCCTTAGTTATTTGTTAAACCTCATAATTCTGTTTCTGTATGTTCAATGTTTCTCTGAGTTGAATACTTAGTTATTTGTTAAACCTCATAATTCTGACCCGAAACCGGTCGATCGATTTAACCTATACATTTAAGTGCAGTTTCC

mRNA sequence

AAACGTATGAATGATTCCAAATTGAGGGGTTCCAACAGGGAGTGAAGGTTGAGATTGTTGGAGGGAAAGAGTGTTGTTGTGCCGCCTGCAGCTGCCGTCGCCGATAATATTTCTGAAGGGGTGATATTCTCAATGGTGAAGAAGAGAAAGCATAGCGAGACTTTTCCAGCAGTATCAGTTAAGAAGAATGATGCTGCCCCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAAGAAAAAGAAGTCGCAAAACAGAGTGATTCTGCTTCTGATCATCCTATTTTTCGAAATAAAGAGAAAGTTCTTGTTACTTGTTCCCGTCGAATCAATTTTAGGTATCGACATTTGATGTTGAATATAGTATCACTTCTGCCACATTGTAAGAAAGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCGACACTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGTGTAGAAAACATAAAGATCTCTATTTATGGATGGCAAAGTGCCCTAGTGGACCATCTGTGAAGTTTTTAGTAAATGCCGTTCATACAATGGAAGAATTGAAGCTTACAGGAAACCACCTGAAAGGTTCCCGTCCAATTTTGACATTCTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGATTTTTGGAACACCAAAGGAGCATCGACATTCTAAACCATACCACGATCATGTATTTGTTTTCTCCATTGTAGATGACCATATATGGTTCCGAAATTACCAGATAGCTGTTCCACATAATGAATCAGATAAAGTAGCTCGAGGAGGACTAGACAAAATGACTCTCATTGAGGTTGGCCCACGGTTTTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCGCTTTATGTATCGCCAAACCAGATTCGAGCGTTGGAGAAAAAACAGAAGGCTGGAAGATACTCAAAGAAAGTTAAAGCTAAAACAAGGAGGAAGATGCATGAGTTATTGAATCCATTGGAACCGGACGAGTTTGCTGATATGTGGAAGGAATAGGTCTTTCGGCGGATTTCATTTAGTCTAGACTCCATTGAAGTTCCTTACCTCCAATGAAATGAGAATTTGTTCTATAATATTGTTGTTATCTATGGTGCAAATTTTGGCCTTAGTTATTTGTTAAACCTCATAATTCTGTTTCTGTATGTTCAATGTTTCTCTGAGTTGAATACTTAGTTATTTGTTAAACCTCATAATTCTGACCCGAAACCGGTCGATCGATTTAACCTATACATTTAAGTGCAGTTTCC

Coding sequence (CDS)

ATGGTGAAGAAGAGAAAGCATAGCGAGACTTTTCCAGCAGTATCAGTTAAGAAGAATGATGCTGCCCCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAAGAAAAAGAAGTCGCAAAACAGAGTGATTCTGCTTCTGATCATCCTATTTTTCGAAATAAAGAGAAAGTTCTTGTTACTTGTTCCCGTCGAATCAATTTTAGGTATCGACATTTGATGTTGAATATAGTATCACTTCTGCCACATTGTAAGAAAGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCGACACTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGTGTAGAAAACATAAAGATCTCTATTTATGGATGGCAAAGTGCCCTAGTGGACCATCTGTGAAGTTTTTAGTAAATGCCGTTCATACAATGGAAGAATTGAAGCTTACAGGAAACCACCTGAAAGGTTCCCGTCCAATTTTGACATTCTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGATTTTTGGAACACCAAAGGAGCATCGACATTCTAAACCATACCACGATCATGTATTTGTTTTCTCCATTGTAGATGACCATATATGGTTCCGAAATTACCAGATAGCTGTTCCACATAATGAATCAGATAAAGTAGCTCGAGGAGGACTAGACAAAATGACTCTCATTGAGGTTGGCCCACGGTTTTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCAACCCTATATGAGAACCCGCTTTATGTATCGCCAAACCAGATTCGAGCGTTGGAGAAAAAACAGAAGGCTGGAAGATACTCAAAGAAAGTTAAAGCTAAAACAAGGAGGAAGATGCATGAGTTATTGAATCCATTGGAACCGGACGAGTTTGCTGATATGTGGAAGGAATAG

Protein sequence

MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVLVTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKMHELLNPLEPDEFADMWKE

Homology

[Close]

BLAST of CcUC01G011020 vs. NCBI nr
Match: XP_038894805.1 (ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida])

HSP 1 Score: 629.0 bits (1621), Expect = 2.2e-176
Identity = 306/318 (96.23%), Postives = 310/318 (97.48%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           MVKKRKHSET PA SVKK+DAA ERPKRTLMGWKD  KEV+K+SDS SDH IFRNKEKVL
Sbjct: 1   MVKKRKHSETLPAESVKKDDAALERPKRTLMGWKD--KEVSKESDSGSDHAIFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK
Sbjct: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL
Sbjct: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAG+YSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLEPDEFADMWKE
Sbjct: 301 HELSNPLEPDEFADMWKE 316

[Close]

BLAST of CcUC01G011020 vs. NCBI nr
Match: KAG7037539.1 (Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 618.2 bits (1593), Expect = 3.9e-173
Identity = 296/318 (93.08%), Postives = 307/318 (96.54%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           M KKRKHSET P VSVKK++ APERPKRTL GWKD  KEVAK+++S SDH +FRNKEKVL
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKD--KEVAKETESGSDHAVFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLK
Sbjct: 121 HKDLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTL
Sbjct: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAG+YSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLEPDEFADMWKE
Sbjct: 301 HELSNPLEPDEFADMWKE 316

[Close]

BLAST of CcUC01G011020 vs. NCBI nr
Match: KAG6590497.1 (Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 618.2 bits (1593), Expect = 3.9e-173
Identity = 299/318 (94.03%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           MVKKRKHSET PAVSVKK+D APER KRTL GWKD  KEV  +S+S SDH +FRNKEKVL
Sbjct: 232 MVKKRKHSETLPAVSVKKDDVAPERSKRTLTGWKD--KEVITKSESDSDHAVFRNKEKVL 291

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKDNKVESRS+KGATLNELVELKGCSSSLFFECRK
Sbjct: 292 VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRK 351

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD HWKLLK
Sbjct: 352 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDAHWKLLK 411

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL
Sbjct: 412 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 471

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAG+YSKKVKAKTRRKM
Sbjct: 472 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 531

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLEPDEFADMWKE
Sbjct: 532 HELSNPLEPDEFADMWKE 547

[Close]

BLAST of CcUC01G011020 vs. NCBI nr
Match: KAG6588467.1 (Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 618.2 bits (1593), Expect = 3.9e-173
Identity = 296/318 (93.08%), Postives = 307/318 (96.54%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           M KKRKHSET P VSVKK++ APERPKRTL GWKD  KEVAK+++S SDH +FRNKEKVL
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKD--KEVAKETESGSDHAVFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLK
Sbjct: 121 HKDLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTL
Sbjct: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAG+YSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLEPDEFADMWKE
Sbjct: 301 HELSNPLEPDEFADMWKE 316

[Close]

BLAST of CcUC01G011020 vs. NCBI nr
Match: XP_022961481.1 (ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_022961482.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_022961484.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_022961485.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata])

HSP 1 Score: 617.5 bits (1591), Expect = 6.6e-173
Identity = 298/318 (93.71%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           MVKKRKHSET PAVSVKK+D APER KRTL GWKD  KEV  +S+S SDH +FRNKEKVL
Sbjct: 1   MVKKRKHSETLPAVSVKKDDVAPERSKRTLTGWKD--KEVITKSESVSDHAVFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKDNKVESRS+KGATLNELVELKGCSSSLFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDK+ HWKLLK
Sbjct: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKEAHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL
Sbjct: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAG+YSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLEPDEFADMWKE
Sbjct: 301 HELSNPLEPDEFADMWKE 316

[Close]

BLAST of CcUC01G011020 vs. ExPASy Swiss-Prot
Match: Q9LE16 (Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-1 PE=2 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 3.3e-151
Identity = 258/318 (81.13%), Postives = 284/318 (89.31%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           M +KRKHSET  A  VK  D+APERP+RTL+GWKDK KE A+ S  A    +FRNKEKVL
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDK-KEDAENSKPAY-ASVFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKD+KVE++SS+GATLNEL+ELKG SS LFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLK
Sbjct: 121 HKDLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           E++ QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDK+ARG LDKMTL
Sbjct: 181 EMLTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAG+++KK+KAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLEPDEF DMW +
Sbjct: 301 HELSNPLEPDEFTDMWND 314

[Close]

BLAST of CcUC01G011020 vs. ExPASy Swiss-Prot
Match: Q9C928 (Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-2 PE=2 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 2.8e-150
Identity = 252/319 (79.00%), Postives = 287/319 (89.97%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKND-AAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKV 60
           M +KRKHSET     VKK+D  AP+RPKRTL+GWKDK +  A+++ + +    F+NKEKV
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSG-FKNKEKV 60

Query: 61  LVTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECR 120
           LVTCSRRI+FRYR LMLNIVSLLPHCKKD+KVE++SSKGATLNEL+ELK  +S LFFECR
Sbjct: 61  LVTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECR 120

Query: 121 KHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLL 180
           KHKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLL
Sbjct: 121 KHKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLL 180

Query: 181 KEIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMT 240
           KE++ Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNESDK+A+GGLDKMT
Sbjct: 181 KEMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGLDKMT 240

Query: 241 LIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRK 300
           LIEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAG+++KK+KAKTR+K
Sbjct: 241 LIEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAKTRKK 300

Query: 301 MHELLNPLEPDEFADMWKE 319
           MHEL NPLEPDEFADMWK+
Sbjct: 301 MHELSNPLEPDEFADMWKD 318

[Close]

BLAST of CcUC01G011020 vs. ExPASy Swiss-Prot
Match: Q4QQT6 (Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.1e-66
Identity = 140/318 (44.03%), Postives = 196/318 (61.64%), Query Frame = 0


Query: 3   KKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDH---PI----FRN 62
           +KR+      A   KKN        R   G   K+ +VAK+++   D    P+    ++N
Sbjct: 6   RKRRGDLEVQAKKPKKN--------RKDAGQPAKQADVAKEAEEEKDRIPGPVCKGKWKN 65

Query: 63  KEKVLVTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLF 122
           KE++L+  SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++
Sbjct: 66  KERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNKCIY 125

Query: 123 FECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVH 182
           FE +K +DLY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD   H
Sbjct: 126 FEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDDLPH 185

Query: 183 WKLLKEIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGL 242
           + LLKE ++QIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D       
Sbjct: 186 YALLKEFLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED------- 245

Query: 243 DKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKA- 302
               L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A +Y +K +  
Sbjct: 246 --AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVVRSITAAKYREKQQVK 301

Query: 303 ---KTRRKMHELLNPLEP 310
              K+R+K  + + P +P
Sbjct: 306 DVQKSRKKEPKTILPHDP 301

[Close]

BLAST of CcUC01G011020 vs. ExPASy Swiss-Prot
Match: Q8TDN6 (Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 SV=2)

HSP 1 Score: 254.2 bits (648), Expect = 1.9e-66
Identity = 136/311 (43.73%), Postives = 193/311 (62.06%), Query Frame = 0


Query: 3   KKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVLVT 62
           +KR+      A   K+N+   E P +     ++ E+E   +         ++NKE++L+ 
Sbjct: 6   RKRRGGFAVQAKKPKRNEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIF 65

Query: 63  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 122
            SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE +K +
Sbjct: 66  SSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNKCIYFEAKKKQ 125

Query: 123 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 182
           DLY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD+  H+ LLKE+
Sbjct: 126 DLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKEL 185

Query: 183 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 242
           ++QIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D           L+E
Sbjct: 186 LIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AALVE 245

Query: 243 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKA----KTRR 302
           +GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A +Y +K +     K R+
Sbjct: 246 IGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYREKQQVKDVQKLRK 302

Query: 303 KMHELLNPLEP 310
           K  + L P +P
Sbjct: 306 KEPKTLLPHDP 302

[Close]

BLAST of CcUC01G011020 vs. ExPASy Swiss-Prot
Match: Q5RAN2 (Ribosome biogenesis protein BRX1 homolog OS=Pongo abelii OX=9601 GN=BRIX1 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.6e-66
Identity = 135/311 (43.41%), Postives = 192/311 (61.74%), Query Frame = 0


Query: 3   KKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVLVT 62
           +KR+      A   K+N+   E P +     ++ E+E   +         ++NKE++L+ 
Sbjct: 6   RKRRGGFAVQAKKPKRNEKDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIF 65

Query: 63  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 122
            SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE +K +
Sbjct: 66  SSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNKCIYFEAKKKQ 125

Query: 123 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 182
           DLY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD+  H+ LLKE+
Sbjct: 126 DLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKEL 185

Query: 183 IVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIE 242
           ++QI  TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D           L+E
Sbjct: 186 LIQILSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AALVE 245

Query: 243 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKA----KTRR 302
           +GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A +Y +K +     K R+
Sbjct: 246 IGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVTRSITAAKYREKQQVKDVQKLRK 302

Query: 303 KMHELLNPLEP 310
           K  + L P +P
Sbjct: 306 KEPKTLLPHDP 302

[Close]

BLAST of CcUC01G011020 vs. ExPASy TrEMBL
Match: A0A6J1HE68 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462050 PE=3 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 3.2e-173
Identity = 298/318 (93.71%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           MVKKRKHSET PAVSVKK+D APER KRTL GWKD  KEV  +S+S SDH +FRNKEKVL
Sbjct: 1   MVKKRKHSETLPAVSVKKDDVAPERSKRTLTGWKD--KEVITKSESVSDHAVFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKDNKVESRS+KGATLNELVELKGCSSSLFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDK+ HWKLLK
Sbjct: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKEAHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL
Sbjct: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAG+YSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLEPDEFADMWKE
Sbjct: 301 HELSNPLEPDEFADMWKE 316

[Close]

BLAST of CcUC01G011020 vs. ExPASy TrEMBL
Match: A0A1S3BQS3 (ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE=3 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.1e-173
Identity = 296/318 (93.08%), Postives = 307/318 (96.54%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           M KKRKHSET P VSVKK++ A ERPKRTLMGWKD  KEV K+S++ SDH +FRNKEKVL
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKD--KEVTKKSEAGSDHAVFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK
Sbjct: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           E+I+QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTL
Sbjct: 181 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAG+YSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLEPDEFADMWKE
Sbjct: 301 HELSNPLEPDEFADMWKE 316

[Close]

BLAST of CcUC01G011020 vs. ExPASy TrEMBL
Match: A0A5D3CG95 (Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003710 PE=3 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.1e-173
Identity = 296/318 (93.08%), Postives = 307/318 (96.54%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           M KKRKHSET P VSVKK++ A ERPKRTLMGWKD  KEV K+S++ SDH +FRNKEKVL
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKD--KEVTKKSEAGSDHAVFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK
Sbjct: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           E+I+QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTL
Sbjct: 181 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAG+YSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLEPDEFADMWKE
Sbjct: 301 HELSNPLEPDEFADMWKE 316

[Close]

BLAST of CcUC01G011020 vs. ExPASy TrEMBL
Match: A0A6J1EW75 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437121 PE=3 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.6e-172
Identity = 295/318 (92.77%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           M KKRKHSET P VSVKK++ APERPKRTL GWKD  KEVAK+++S SDH +FRNKEKVL
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKD--KEVAKETESGSDHAVFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLK
Sbjct: 121 HKDLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGGLDKMTL
Sbjct: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAG+YSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLE DEFADMWKE
Sbjct: 301 HELSNPLEQDEFADMWKE 316

[Close]

BLAST of CcUC01G011020 vs. ExPASy TrEMBL
Match: A0A6J1HZ18 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467904 PE=3 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 2.1e-172
Identity = 297/316 (93.99%), Postives = 304/316 (96.20%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           MVKKRKHSET PAVSVKK+D APER KRTL GWKD  KEV  +S+S SDH +FRNKEKVL
Sbjct: 1   MVKKRKHSETLPAVSVKKDDVAPERSKRTLTGWKD--KEVTTKSESDSDHAVFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKDNKVESRS+KGATLNELVELKGCSSSLFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSTKGATLNELVELKGCSSSLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDAHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL
Sbjct: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAG+YSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMW 317
           HEL NPLEPDEFADMW
Sbjct: 301 HELSNPLEPDEFADMW 314

[Close]

BLAST of CcUC01G011020 vs. TAIR 10
Match: AT3G15460.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 535.8 bits (1379), Expect = 2.4e-152
Identity = 258/318 (81.13%), Postives = 284/318 (89.31%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKNDAAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKVL 60
           M +KRKHSET  A  VK  D+APERP+RTL+GWKDK KE A+ S  A    +FRNKEKVL
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDK-KEDAENSKPAY-ASVFRNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRINFRYRHLMLN+VSLLPHCKKD+KVE++SS+GATLNEL+ELKG SS LFFECRK
Sbjct: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLK
Sbjct: 121 HKDLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLK 180

Query: 181 EIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTL 240
           E++ QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDK+ARG LDKMTL
Sbjct: 181 EMLTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAG+++KK+KAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTRRKM 300

Query: 301 HELLNPLEPDEFADMWKE 319
           HEL NPLEPDEF DMW +
Sbjct: 301 HELSNPLEPDEFTDMWND 314

[Close]

BLAST of CcUC01G011020 vs. TAIR 10
Match: AT1G52930.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 532.7 bits (1371), Expect = 2.0e-151
Identity = 252/319 (79.00%), Postives = 287/319 (89.97%), Query Frame = 0


Query: 1   MVKKRKHSETFPAVSVKKND-AAPERPKRTLMGWKDKEKEVAKQSDSASDHPIFRNKEKV 60
           M +KRKHSET     VKK+D  AP+RPKRTL+GWKDK +  A+++ + +    F+NKEKV
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSG-FKNKEKV 60

Query: 61  LVTCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECR 120
           LVTCSRRI+FRYR LMLNIVSLLPHCKKD+KVE++SSKGATLNEL+ELK  +S LFFECR
Sbjct: 61  LVTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECR 120

Query: 121 KHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLL 180
           KHKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLL
Sbjct: 121 KHKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLL 180

Query: 181 KEIIVQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMT 240
           KE++ Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNESDK+A+GGLDKMT
Sbjct: 181 KEMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGLDKMT 240

Query: 241 LIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGRYSKKVKAKTRRK 300
           LIEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAG+++KK+KAKTR+K
Sbjct: 241 LIEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAKTRKK 300

Query: 301 MHELLNPLEPDEFADMWKE 319
           MHEL NPLEPDEFADMWK+
Sbjct: 301 MHELSNPLEPDEFADMWKD 318

The following BLAST results are available for this feature:

BLAST of CcUC01G011020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894805.1	2.2e-176	96.23	ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida]	[more]
KAG7037539.1	3.9e-173	93.08	Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6590497.1	3.9e-173	94.03	Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. ...	[more]
KAG6588467.1	3.9e-173	93.08	Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022961481.1	6.6e-173	93.71	ribosome biogenesis protein BRX1 homolog 1-like [Cucurbita moschata] >XP_0229614...	[more]

BLAST of CcUC01G011020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE16	3.3e-151	81.13	Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q9C928	2.8e-150	79.00	Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q4QQT6	1.1e-66	44.03	Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 ...	[more]
Q8TDN6	1.9e-66	43.73	Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 S...	[more]
Q5RAN2	5.6e-66	43.41	Ribosome biogenesis protein BRX1 homolog OS=Pongo abelii OX=9601 GN=BRIX1 PE=2 S...	[more]

BLAST of CcUC01G011020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HE68	3.2e-173	93.71	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3BQS3	7.1e-173	93.08	ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE...	[more]
A0A5D3CG95	7.1e-173	93.08	Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1EW75	1.6e-172	92.77	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HZ18	2.1e-172	93.99	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CcUC01G011020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15460.1	2.4e-152	81.13	Ribosomal RNA processing Brix domain protein	[more]
AT1G52930.1	2.0e-151	79.00	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 60..254 e-value: 5.4E-50 score: 182.1
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 64..253 e-value: 3.8E-34 score: 118.5
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 57..260 score: 32.466351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	PANTHER	PTHR13634:SF3	RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG 2	coord: 1..318
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 58..257
IPR026532	Ribosome biogenesis protein BRX1	PANTHER	PTHR13634	RIBOSOME BIOGENESIS PROTEIN BRIX	coord: 1..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G011020.1	CcUC01G011020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0019843	rRNA binding