CcUC01G010770 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G010770
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1
LocationCicolChr01: 16382425 .. 16387027 (-)
RNA-Seq ExpressionCcUC01G010770
SyntenyCcUC01G010770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTATACATTATATAATTATATATAATTTGTTTATATTTATATGCAAATATTGCGCCCATTCCAGATGCAAATTCCTTTTCTTACACAAATATCTTCCTTCTTCTCTCTGTTTCATATATAGCCTTCATTCGTTTATTTGGTATTGCATATATTTATCTAGAACAAAAACCAAAACAGTAACTGGAACAAGGAAAGAGATAGGAAAAAAGGAGGGCCTCTCGCCCTCTCTTCTTATTATGCCTTCTCTTAGATCTTAGATTCTCGAGTTCCCAACTGGGTCGTTTTCATTTGGGTAAGTTTTTTTTCCCTTAATCTCTTCTTTTCTCTGCAAATCATTTGTTTTCTCTATCTTTTTACTTGAATAGTTTTCTGGGTTTTGAATCAAAACTCATTTCTTGGGAATTTTAGCCTTTTTCTTTGAAGGGGGTCATTTCCCTTTTTCTGCCTTTACCTTTTGAGGATTCCTTGTTTGTAGATCGATCGATTTTTTCTGATCGGTGGACGCTCCGATGCTCTGAGATCGAATCTGATTGCAATCATTTTGTATCTAACAATAAGAGCATTTTCTATTTTGATGATGATGATTTTTTGTTTTTGATGACATCTGTTTAATTTAGCTTGCATTGTGGTGTTTTTCAAATGAATGCTTCTTTTTCAATCATTGCTTGAATTCTATTCCCCTTCTAATGTAAGCACGGATATCCATATTGTTTTTGTATAGCTTTCTGTTTTTCTTCAGCCTGGATTGATCGACTTTGTGGCTTCTTCTTCTCAAGGCGATTGGCTTAGACTTTAAGATATGCGATTGCTGTGTGGTGTATGCATTCATGTTGTTGAATGATATTGATGGGATTAGTTGGAATGGATTTGTAGAGTGGGCATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTACTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTTGGTTTTGTTGTCTTTGCTGACCCTGTTGTTGCGGCAAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTGTAAGTCTTGTGTATTCTTCTTGATTCTCATTGATATTTCCACCTGTATTCGAAGCTATAGATGTCTTTCATGGAATGTTCCAGCGGGTGTTCTTTTGATTCTGCGAATGAATATGCTCGTGGGGCAATCAAGGTTTTCCTGATGTTTTTTGGTGTTCATCATGGTTCAAACTTATTAGAATTCTTCAGCATTTGTATTCTAAATCTCTTTTACCTTGGTAAACTCATAATTATCCTTCGGAGTGTGAATGGGAAGATTTGGCTGTTCGCATTTTATTAAGACAATTTCTGTTCATGTGTAATGGAGTTCATGCTTTTGTGGAAGTATGATGCCAATGTATGTGCTTGAAATGTCAATTTTTTTCAGAATCAATAGCTTAGATAACATGCCCTTCAAAAGGTAATATGCATGATGACAGTAAAAGCATTTATTTGTAGAAACATTTATATATCAAATCAACACCGTGAGAGGACCTTGGTCCTTGGATAAATATGAAAATTTCATGTAGAAAGAAATCTATCATAATATTCCTTGTAGTCCTCAATGTGAAACCATGATTTGTGAAAATTAGGAGGTTTGTCATCTTGTAGAGTTTGTCATGGACATTAGGTTTTATGTGTGATGGCCACCATTTGTATGAAAAGGATACATTTTGTTGCTTCCACACTTCTTTTGTATTGGTAATGAGAATAAATTCTACCATTTTCATGTTTTGGTGTACATTTTCTATTTTTCAGGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGAAACAATACTGGTATCCTTGGGTCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATTGTAGATGTCGTGGTGATGTATGATCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTATACAAAACTTTTCATGAGCTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGGTGGATACCCTTACAGTTTTGGTAGAGTTGGTAGCTATTTAAATGCCTATAATCAAGGATATAATCCAACCTCAGTTGGAGGATATGGATTCAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGGGTGGACTTTCTCCAATCAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTACGGAACAGGTCCCAATGTTAGCTCTAACCTCAGTTATGGACGGGTAATGAGCCCCTCGTATGGTGGAAATTTAAGTAGGTATGGTAGCCCAAACCCCATGGTATATGGTGGTGGCAGTGGAGGTAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTTGGTAACTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGGTCTGGTGGTGTGCATACAGGAACTAATTCATTGAACAGCATCGGAGGGCTTTGGGGTGCTTCTGCAAGTCTAGGTCATGGGGAAAATGCTGGTTCTCAATTCAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGTTATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCTACTTCAAGGAAAACTTCGGATATTTTCAAATTTTTCTTTCTTTGACTGTTGTTAATTCTCTAGGGACTTTAGACATTCAAGCTTTTATCACTTTAAGCATTATAAAAACTCAAATCAAACTTGATTATTGCAACCTAACTTGAACAAGATCTGATCTGTAGGTTGTATCACAATGTCTTTAGTTATAAAGAGTGCATAATACGTGCCTTTTCATATTTATGCATTTTTAGGAGTTTTTCCTGGAATTTCTTAAATCTTCTTAGACAAATCAGAATATATTAACCTTGAAACCAATGTAATGTACGCATGCGCTTTCTAAAGTTGTGAGAGCCTATTTAGTGAAAGAACTTTTACTTTTTAGAACAAGACTTAAGTGAAAATATGTTTTCTTCCGGATAACTGTTTTGAAAATTTTGTAATTTCTTAGTTTACTTTACGATGGATGATCTGTTTTCTTGAGGATTTCTAATGTTCTTTCCTCCAAAATGTTAGATTTGAAAACAATGCTTCCTGCCACATGTGATACCTTTTGATTTTTCTAGCTATCTGATCATAGTTTCTAAATGTTGTTTCAAAAACAAAAGCAGAAAATATATCCAAAAACAATCCCTATTCCCTAAGTTTTTCAGTGCAAGCTTGCAATGTTGACTAGTTTTTTTCTCTTTTACACAAAAGTAAGTTTGCAGTCACCTATAGAAATAAGTGAAAAGGATCCATATTTATTGCCTACTAATTTGTGGATTAGATTCGTATCTATTTCGTTGCGATGTAATTAAAATTTATGATCGTCAAAAGTACATTTGAACGTGTATGAGTTATTTGCTGAACATCGGTTGTTGTTAGGGAATTGTCCAAATCGTGCTTAAACAAACATAGGTTTAACCATTTGAAAATAGCCTGATCTTTTTTTTTTTTGTGTTTAAATGTTTGATTCAGGAATTGCTGCTTAGGAAGAAGATGATACAACAGATGTCAAAAATTATAGTAGGTGATGCGTATTCGGTAAAGCAGGTGTACTGCAAATTTTCGTATAATTTCGTGATTGTGATACACTCCCATTTGATACTGTCAGAGCTAATTTGTTTTCTGTTTGACAAACTGTCCCATAAAGAAGCAGGTTCCAGAGGGTTTTCTCTTGGTCAGGATTGAGCTTGAAAATATAGGTCTTTCTTCTTTCTTCTTCTACTTCTTCTTTCTTTCTTGTAATTTGATTGATATGTATAATTGGATTGTGGGTAAGGTATATATGCAGAACTGTTGCATAATACGCTACTCCGAGAAACGATGTCACACGAACGAATCAACATCTTTCTTCTTTCTTTTTTTCCTCCTTTTCTTTCCGGGTTCGTTTTTCAGGGAAAGATGCTAGTACTCATCAGGTTTTCTTGTTGTTTGACCTTTTATTATTAGTCATTCTGGGTTTTTACTTCTCATCTGATTGTATGAAACTGAGGTTGATTTAGTGGTGTGATATTATCCAGCTTCCCAATTCTTCTTTGTTGTAAATTTAGCTCCTTTTTGAGCTAAACTTTTATAAGTTCAAAAACAC

mRNA sequence

CCTATACATTATATAATTATATATAATTTGTTTATATTTATATGCAAATATTGCGCCCATTCCAGATGCAAATTCCTTTTCTTACACAAATATCTTCCTTCTTCTCTCTGTTTCATATATAGCCTTCATTCGTTTATTTGGTATTGCATATATTTATCTAGAACAAAAACCAAAACAGTAACTGGAACAAGGAAAGAGATAGGAAAAAAGGAGGGCCTCTCGCCCTCTCTTCTTATTATGCCTTCTCTTAGATCTTAGATTCTCGAGTTCCCAACTGGGTCGTTTTCATTTGGCTTTCTGTTTTTCTTCAGCCTGGATTGATCGACTTTGTGGCTTCTTCTTCTCAAGGCGATTGGCTTAGACTTTAAGATATGCGATTGCTGTGTGGTGTATGCATTCATGTTGTTGAATGATATTGATGGGATTAGTTGGAATGGATTTGTAGAGTGGGCATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTACTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTTGGTTTTGTTGTCTTTGCTGACCCTGTTGTTGCGGCAAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTATGTCTTTCATGGAATGTTCCAGCGGGTGTTCTTTTGATTCTGCGAATGAATATGCTCGTGGGGCAATCAAGGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGAAACAATACTGGTATCCTTGGGTCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATTGTAGATGTCGTGGTGATGTATGATCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTATACAAAACTTTTCATGAGCTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGGTGGATACCCTTACAGTTTTGGTAGAGTTGGTAGCTATTTAAATGCCTATAATCAAGGATATAATCCAACCTCAGTTGGAGGATATGGATTCAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGGGTGGACTTTCTCCAATCAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTACGGAACAGGTCCCAATGTTAGCTCTAACCTCAGTTATGGACGGGTAATGAGCCCCTCGTATGGTGGAAATTTAAGTAGGTATGGTAGCCCAAACCCCATGGTATATGGTGGTGGCAGTGGAGGTAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTTGGTAACTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGGTCTGGTGGTGTGCATACAGGAACTAATTCATTGAACAGCATCGGAGGGCTTTGGGGTGCTTCTGCAAGTCTAGGTCATGGGGAAAATGCTGGTTCTCAATTCAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGTTATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCTACTTCAAGGAAAACTTCGGATATTTTCAAGAATTGCTGCTTAGGAAGAAGATGATACAACAGATGTCAAAAATTATAGTAGGTGATGCGTATTCGGTAAAGCAGGTGTACTGCAAATTTTCGTATAATTTCGTGATTGTGATACACTCCCATTTGATACTGTCAGAGCTAATTTGTTTTCTGTTTGACAAACTGTCCCATAAAGAAGCAGGTTCCAGAGGGTTTTCTCTTGGTCAGGATTGAGCTTGAAAATATAGGTCTTTCTTCTTTCTTCTTCTACTTCTTCTTTCTTTCTTGTAATTTGATTGATATGTATAATTGGATTGTGGGTAAGGTATATATGCAGAACTGTTGCATAATACGCTACTCCGAGAAACGATGTCACACGAACGAATCAACATCTTTCTTCTTTCTTTTTTTCCTCCTTTTCTTTCCGGGTTCGTTTTTCAGGGAAAGATGCTAGTACTCATCAGGTTTTCTTGTTGTTTGACCTTTTATTATTAGTCATTCTGGGTTTTTACTTCTCATCTGATTGTATGAAACTGAGGTTGATTTAGTGGTGTGATATTATCCAGCTTCCCAATTCTTCTTTGTTGTAAATTTAGCTCCTTTTTGAGCTAAACTTTTATAAGTTCAAAAACAC

Coding sequence (CDS)

ATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTACTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTTGGTTTTGTTGTCTTTGCTGACCCTGTTGTTGCGGCAAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTATGTCTTTCATGGAATGTTCCAGCGGGTGTTCTTTTGATTCTGCGAATGAATATGCTCGTGGGGCAATCAAGGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGAAACAATACTGGTATCCTTGGGTCACCTGGTCCTACTCGCACAAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGTGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATTGTAGATGTCGTGGTGATGTATGATCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTATGAGTCAGAGGAATCAGTGGAGAAAGTGTTATACAAAACTTTTCATGAGCTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGGTGGATACCCTTACAGTTTTGGTAGAGTTGGTAGCTATTTAAATGCCTATAATCAAGGATATAATCCAACCTCAGTTGGAGGATATGGATTCAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGGGTGGACTTTCTCCAATCAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTACGGAACAGGTCCCAATGTTAGCTCTAACCTCAGTTATGGACGGGTAATGAGCCCCTCGTATGGTGGAAATTTAAGTAGGTATGGTAGCCCAAACCCCATGGTATATGGTGGTGGCAGTGGAGGTAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTTGGTAACTCTGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGGTCTGGTGGTGTGCATACAGGAACTAATTCATTGAACAGCATCGGAGGGCTTTGGGGTGCTTCTGCAAGTCTAGGTCATGGGGAAAATGCTGGTTCTCAATTCAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTCGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTTGGTTATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCTACTTCAAGGAAAACTTCGGATATTTTCAAGAATTGCTGCTTAGGAAGAAGATGATACAACAGATGTCAAAAATTATAGTAGGTGATGCGTATTCGGTAAAGCAGGTGTACTGCAAATTTTCGTATAATTTCGTGATTGTGATACACTCCCATTTGATACTGTCAGAGCTAATTTGTTTTCTGTTTGACAAACTGTCCCATAAAGAAGCAGGTTCCAGAGGGTTTTCTCTTGGTCAGGATTGA

Protein sequence

MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNPTSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGESFYFKENFGYFQELLLRKKMIQQMSKIIVGDAYSVKQVYCKFSYNFVIVIHSHLILSELICFLFDKLSHKEAGSRGFSLGQD
Homology
[Close]
BLAST of CcUC01G010770 vs. NCBI nr
Match: XP_038894700.1 (heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida] >XP_038894701.1 heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida])

HSP 1 Score: 916.4 bits (2367), Expect = 1.3e-262
Identity = 468/499 (93.79%), Postives = 470/499 (94.19%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 61  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 120

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPY+FGRVGSYLN YNQGYNP
Sbjct: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNP 240

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           TSVGGYG RSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNV SNLSYGRV
Sbjct: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVGSNLSYGRV 300

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSYGGNL+RYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTN SHLRTFPGSG
Sbjct: 301 MSPSYGGNLNRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSG 360

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGTNSLNSIGGLWGASASLGHGENAGS FNTANLDFGSGDASFTSGTTVGYARSIGT
Sbjct: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGT 420

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 475

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NNAGYTVGYGVSNRQSNRG
Sbjct: 481 NNAGYTVGYGVSNRQSNRG 475

[Close]
BLAST of CcUC01G010770 vs. NCBI nr
Match: XP_022142553.1 (heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia] >XP_022142555.1 heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia])

HSP 1 Score: 894.8 bits (2311), Expect = 3.9e-256
Identity = 455/499 (91.18%), Postives = 465/499 (93.19%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPV+AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 61  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 120

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEE 180

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPY FGRVGSYLN YNQGYNP
Sbjct: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNP 240

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
            SVGGYG RSDGRFSP++VGRGGLSPISPGYGIGLNLDTGL+PNYG GPN +SNLSYGRV
Sbjct: 241 ASVGGYGLRSDGRFSPISVGRGGLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRV 300

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSYG NL+RYGSPNPM+YGGGSGGNGSILSSSVQNLWGNVGNSAG NSSHLRTFPGSG
Sbjct: 301 MSPSYGVNLNRYGSPNPMLYGGGSGGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSG 360

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGTNSLNSIGGLWGASASLGHGENAGS FNTANLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGT 420

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGN+FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 421 NVSSASLYSAPNIYDEVHGNNDEGNSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 475

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           N+AGYTVGYGVSNRQSNRG
Sbjct: 481 NSAGYTVGYGVSNRQSNRG 475

[Close]
BLAST of CcUC01G010770 vs. NCBI nr
Match: XP_008463611.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo])

HSP 1 Score: 893.3 bits (2307), Expect = 1.1e-255
Identity = 456/499 (91.38%), Postives = 464/499 (92.99%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 61  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 120

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQL GYPY+FGRVGSYLN YNQGYNP
Sbjct: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNP 240

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           TSVGGYG RSDGRFSPVTVGRGGLSPISPGYG+G+NLDTGLNPNYGTGP  SSNLSYGRV
Sbjct: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRV 300

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSYGGNL+RYGSPNPMVYGGG GGNGSILSSSVQNLWGNV NSAGTNSSHLRTFPGSG
Sbjct: 301 MSPSYGGNLNRYGSPNPMVYGGGGGGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSG 360

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGTNSLN+IGGLWG SASLGHGEN GS FNTANLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 361 GVHTGTNSLNNIGGLWGTSASLGHGENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGT 420

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 473

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NNAGYTVGYGVSNRQSNRG
Sbjct: 481 NNAGYTVGYGVSNRQSNRG 473

[Close]
BLAST of CcUC01G010770 vs. NCBI nr
Match: KAA0035665.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYK30878.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 893.3 bits (2307), Expect = 1.1e-255
Identity = 456/499 (91.38%), Postives = 464/499 (92.99%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 38  MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 97

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 98  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 157

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 158 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 217

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQL GYPY+FGRVGSYLN YNQGYNP
Sbjct: 218 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNP 277

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           TSVGGYG RSDGRFSPVTVGRGGLSPISPGYG+G+NLDTGLNPNYGTGP  SSNLSYGRV
Sbjct: 278 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRV 337

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSYGGNL+RYGSPNPMVYGGG GGNGSILSSSVQNLWGNV NSAGTNSSHLRTFPGSG
Sbjct: 338 MSPSYGGNLNRYGSPNPMVYGGGGGGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSG 397

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGTNSLN+IGGLWG SASLGHGEN GS FNTANLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 398 GVHTGTNSLNNIGGLWGTSASLGHGENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGT 457

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 458 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 510

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NNAGYTVGYGVSNRQSNRG
Sbjct: 518 NNAGYTVGYGVSNRQSNRG 510

[Close]
BLAST of CcUC01G010770 vs. NCBI nr
Match: XP_031745329.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucumis sativus] >KGN65038.1 hypothetical protein Csa_013020 [Cucumis sativus])

HSP 1 Score: 885.2 bits (2286), Expect = 3.1e-253
Identity = 452/499 (90.58%), Postives = 463/499 (92.79%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDR TGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 61  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 120

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQL GYP++FGRVGSYLN YNQGYNP
Sbjct: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNP 240

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           T+VGGYG RSDGRFSPVTVGRGGLSPISPGYG+GLNL+TGLNPNYGTGPNVSSNLSYGRV
Sbjct: 241 TAVGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRV 300

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSY GNL+RYGSPNPMVY GG GGNGSILSSSVQNLWGNV  SAGTNSSHLRTFPGSG
Sbjct: 301 MSPSYSGNLNRYGSPNPMVYSGG-GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSG 360

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGT+SLN+IGGLWGASASLGHGENAGS FNT NLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 361 GVHTGTSSLNNIGGLWGASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGT 420

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 474

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NNAGYTVGYGVSNRQSNRG
Sbjct: 481 NNAGYTVGYGVSNRQSNRG 474

[Close]
BLAST of CcUC01G010770 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-56
Identity = 161/449 (35.86%), Postives = 226/449 (50.33%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLF+GGISW+TDED+LRE+F ++GEV + ++MRD+ TGR RGFGFV+F+DP V  RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSR----NNTG 121
           + EKH ID R                        +V+ K+A+ R++Q +  R    N + 
Sbjct: 64  LQEKHSIDTR------------------------EVDVKRAMSREEQQVSGRTGNLNTSR 123

Query: 122 ILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYE 181
             G     +TKKIFVGGL  T+T+ +F++YF+ +G + DV +MYD  T RPRGFGF++++
Sbjct: 124 SSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFD 183

Query: 182 SEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQG 241
           SE++V+ VL+KTFH+L+GK VEVKRA+PK+++P      +GG     G  G Y     QG
Sbjct: 184 SEDAVDSVLHKTFHDLSGKQVEVKRALPKDANPGGGGRSMGG-----GGSGGY-----QG 243

Query: 242 YNPTSVGGYGFRSDGRF-SPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLS 301
           Y        G     RF    +VG G  S  S GYG G          YG G N +   +
Sbjct: 244 YGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAG----------YGNGSNGAGYGA 303

Query: 302 YGRVMSPSYGGNLSRYGSPNPMVYGGGS---GGNGSILSSSVQNLWGNVGNSAGTNSSHL 361
           YG      Y G+   YG+     YG  +    G GS    + +N W    +S   N  + 
Sbjct: 304 YG-----GYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGY- 363

Query: 362 RTFPGSGGVHTG----------------TNSLNSIGGLWGASASLGH--------GENAG 415
               GSG  H+G                +N     GG  G+ +  G+        G  +G
Sbjct: 364 ----GSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYGNQAAYGVVGGRPSG 398

[Close]
BLAST of CcUC01G010770 vs. ExPASy Swiss-Prot
Match: Q96DH6 (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.9e-44
Identity = 129/349 (36.96%), Postives = 176/349 (50.43%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLE-KHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 121
           + +  H +D +T                        ++ K A PR  Q  +         
Sbjct: 79  LGQPHHELDSKT------------------------IDPKVAFPRRAQPKM--------- 138

Query: 122 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 181
               TRTKKIFVGGL++     D K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+
Sbjct: 139 ---VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 198

Query: 182 SVEKVLYKTFHELNGKMVEVKRAVPKE-SSPVPNRNQLGGYPYS-------FGRVG--SY 241
            VEKV    FHE+N KMVE K+A PKE   P   R +  G PY+        G +G  ++
Sbjct: 199 VVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNF 258

Query: 242 LNAYNQGYNPTSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPN 301
           +  Y +GY P     YG++  G F     G    + ++   G G N      P    G N
Sbjct: 259 VATYGRGY-PGFAPSYGYQFPG-FPAAAYGPVAAAAVAAARGSGSN---PARPGGFPGAN 318

Query: 302 VSSNLS--YGRVMSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQN 338
               ++  YG     S  GN     SP P   G G G  G +++++  N
Sbjct: 319 SPGPVADLYGPASQDSGVGNYISAASPQP-GSGFGHGIAGPLIATAFTN 325

[Close]
BLAST of CcUC01G010770 vs. ExPASy Swiss-Prot
Match: Q920Q6 (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 8.4e-44
Identity = 135/375 (36.00%), Postives = 182/375 (48.53%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLE-KHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 121
           + +  H +D +T                        ++ K A PR  Q  +         
Sbjct: 79  LGQPHHELDSKT------------------------IDPKVAFPRRAQPKM--------- 138

Query: 122 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 181
               TRTKKIFVGGL++     D K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+
Sbjct: 139 ---VTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENED 198

Query: 182 SVEKVLYKTFHELNGKMVEVKRAVPKE-SSPVPNRNQLGGYPYS-------FGRVG--SY 241
            VEKV    FHE+N KMVE K+A PKE   P   R +  G PY+        G +G  ++
Sbjct: 199 VVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNF 258

Query: 242 LNAYNQGYNPTSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPN 301
           +  Y +GY P     YG++  G F     G    + ++   G  LN       +Y   PN
Sbjct: 259 VATYGRGY-PGFAPSYGYQFPG-FPAAAYGPVAAAAVAAARGSVLN-------SYSAQPN 318

Query: 302 VSSNLSYGRVMSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNS 361
                 +G   SP+           NP   GG  G N       V +L+G     +G  +
Sbjct: 319 ------FGAPASPA---------GSNPARPGGFPGANS---PGPVADLYGPASQDSGVGN 330

Query: 362 --SHLRTFPGSGGVH 364
             S     PGSG  H
Sbjct: 379 YISAASPQPGSGFGH 330

[Close]
BLAST of CcUC01G010770 vs. ExPASy Swiss-Prot
Match: Q9VVE5 (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 170.6 bits (431), Expect = 5.1e-41
Identity = 92/207 (44.44%), Postives = 125/207 (60.39%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  + LR+YF  +G++ E M+M+D TT R+RGFGFV F+DP    +V
Sbjct: 27  DPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 86

Query: 62  VLE-KHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 121
           + +  H +DG+                        KV+ K A PR       R +  ++ 
Sbjct: 87  LTQGTHELDGK------------------------KVDPKVAFPR-------RAHPKMV- 146

Query: 122 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 181
               TRTKKIFVGGL++  T  D K YF+QFG I D ++M+D  T R RGFGF+T++SE+
Sbjct: 147 ----TRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 197

Query: 182 SVEKVLYKTFHELNGKMVEVKRAVPKE 208
            V+KV    FHE+N KMVE K+A PKE
Sbjct: 207 VVDKVCEIHFHEINNKMVECKKAQPKE 197

[Close]
BLAST of CcUC01G010770 vs. ExPASy Swiss-Prot
Match: Q9C652 (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-40
Identity = 99/251 (39.44%), Postives = 145/251 (57.77%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D  KLF+GGI+ +T E+ L++YF  +G V+E ++ +++ TG+ RGFGFV FA+     + 
Sbjct: 4   DRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKA 63

Query: 62  VLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILGS 121
           + + H I G+ +   +     +      Y +       ++ V + +  +   ++ G+   
Sbjct: 64  LRDTHFILGKPVDVRK-----AIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGV--- 123

Query: 122 PGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEES 181
              +RTKKIFVGGL+S  TE +FK YF++FG   DVVVM+D  T RPRGFGF+TY+SE+S
Sbjct: 124 --TSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDS 183

Query: 182 VEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYP-YSFGRVGSYLNAYNQGYN- 241
           VE V+   FHEL+ K VEVKRA+PKE     N N +   P YS  +   Y+   N GY  
Sbjct: 184 VEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQATPYVPEQN-GYGM 243

Query: 242 ----PTSVGGY 247
               P  V GY
Sbjct: 244 VLQFPPPVFGY 243

[Close]
BLAST of CcUC01G010770 vs. ExPASy TrEMBL
Match: A0A6J1CL94 (heterogeneous nuclear ribonucleoprotein 1 OS=Momordica charantia OX=3673 GN=LOC111012638 PE=4 SV=1)

HSP 1 Score: 894.8 bits (2311), Expect = 1.9e-256
Identity = 455/499 (91.18%), Postives = 465/499 (93.19%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPV+AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 61  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 120

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEE 180

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPY FGRVGSYLN YNQGYNP
Sbjct: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNP 240

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
            SVGGYG RSDGRFSP++VGRGGLSPISPGYGIGLNLDTGL+PNYG GPN +SNLSYGRV
Sbjct: 241 ASVGGYGLRSDGRFSPISVGRGGLSPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRV 300

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSYG NL+RYGSPNPM+YGGGSGGNGSILSSSVQNLWGNVGNSAG NSSHLRTFPGSG
Sbjct: 301 MSPSYGVNLNRYGSPNPMLYGGGSGGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSG 360

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGTNSLNSIGGLWGASASLGHGENAGS FNTANLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGT 420

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGN+FYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 421 NVSSASLYSAPNIYDEVHGNNDEGNSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 475

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           N+AGYTVGYGVSNRQSNRG
Sbjct: 481 NSAGYTVGYGVSNRQSNRG 475

[Close]
BLAST of CcUC01G010770 vs. ExPASy TrEMBL
Match: A0A5D3E516 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00810 PE=4 SV=1)

HSP 1 Score: 893.3 bits (2307), Expect = 5.5e-256
Identity = 456/499 (91.38%), Postives = 464/499 (92.99%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 38  MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 97

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 98  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 157

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 158 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 217

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQL GYPY+FGRVGSYLN YNQGYNP
Sbjct: 218 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNP 277

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           TSVGGYG RSDGRFSPVTVGRGGLSPISPGYG+G+NLDTGLNPNYGTGP  SSNLSYGRV
Sbjct: 278 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRV 337

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSYGGNL+RYGSPNPMVYGGG GGNGSILSSSVQNLWGNV NSAGTNSSHLRTFPGSG
Sbjct: 338 MSPSYGGNLNRYGSPNPMVYGGGGGGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSG 397

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGTNSLN+IGGLWG SASLGHGEN GS FNTANLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 398 GVHTGTNSLNNIGGLWGTSASLGHGENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGT 457

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 458 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 510

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NNAGYTVGYGVSNRQSNRG
Sbjct: 518 NNAGYTVGYGVSNRQSNRG 510

[Close]
BLAST of CcUC01G010770 vs. ExPASy TrEMBL
Match: A0A1S3CK54 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103501720 PE=4 SV=1)

HSP 1 Score: 893.3 bits (2307), Expect = 5.5e-256
Identity = 456/499 (91.38%), Postives = 464/499 (92.99%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 61  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 120

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQL GYPY+FGRVGSYLN YNQGYNP
Sbjct: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNP 240

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           TSVGGYG RSDGRFSPVTVGRGGLSPISPGYG+G+NLDTGLNPNYGTGP  SSNLSYGRV
Sbjct: 241 TSVGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRV 300

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSYGGNL+RYGSPNPMVYGGG GGNGSILSSSVQNLWGNV NSAGTNSSHLRTFPGSG
Sbjct: 301 MSPSYGGNLNRYGSPNPMVYGGGGGGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSG 360

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGTNSLN+IGGLWG SASLGHGEN GS FNTANLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 361 GVHTGTNSLNNIGGLWGTSASLGHGENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGT 420

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 473

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NNAGYTVGYGVSNRQSNRG
Sbjct: 481 NNAGYTVGYGVSNRQSNRG 473

[Close]
BLAST of CcUC01G010770 vs. ExPASy TrEMBL
Match: A0A0A0LTE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181500 PE=4 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 1.5e-253
Identity = 452/499 (90.58%), Postives = 463/499 (92.79%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDR TGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQNILSRNNTGILG
Sbjct: 61  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNILSRNNTGILG 120

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQL GYP++FGRVGSYLN YNQGYNP
Sbjct: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNP 240

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           T+VGGYG RSDGRFSPVTVGRGGLSPISPGYG+GLNL+TGLNPNYGTGPNVSSNLSYGRV
Sbjct: 241 TAVGGYGLRSDGRFSPVTVGRGGLSPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRV 300

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSY GNL+RYGSPNPMVY GG GGNGSILSSSVQNLWGNV  SAGTNSSHLRTFPGSG
Sbjct: 301 MSPSYSGNLNRYGSPNPMVYSGG-GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSG 360

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGT+SLN+IGGLWGASASLGHGENAGS FNT NLDFG+GDASFTSGTTVGYARSIGT
Sbjct: 361 GVHTGTSSLNNIGGLWGASASLGHGENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGT 420

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR
Sbjct: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 474

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NNAGYTVGYGVSNRQSNRG
Sbjct: 481 NNAGYTVGYGVSNRQSNRG 474

[Close]
BLAST of CcUC01G010770 vs. ExPASy TrEMBL
Match: A0A6J1EKS0 (heterogeneous nuclear ribonucleoprotein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434205 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 3.5e-250
Identity = 445/499 (89.18%), Postives = 454/499 (90.98%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 33  MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 92

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVLEKHVIDGRT                        VEAKKAVPRDDQN+LSRNNTGILG
Sbjct: 93  VVLEKHVIDGRT------------------------VEAKKAVPRDDQNVLSRNNTGILG 152

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGPTRTKKIFVGGLASTVTESDFK YFDQFGTI DVVVMYDHNTQRPRGFGFITYESEE
Sbjct: 153 SPGPTRTKKIFVGGLASTVTESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEE 212

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNR+QLG YPY FGRVGSYLN YNQGYNP
Sbjct: 213 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNP 272

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           TSVG YG RSD RFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTG NV SNLSYGRV
Sbjct: 273 TSVGAYGLRSDDRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRV 332

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSG 360
           MSPSYGGNL+RYGSPNPMVYGGG+GGNGSILSSSVQNLWGNVGNS GTNSSHLRTFPGSG
Sbjct: 333 MSPSYGGNLNRYGSPNPMVYGGGNGGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSG 392

Query: 361 GVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYARSIGT 420
           GVHTGTNSLN IGGLWGASASL HGE++GS FN  NLDF SGD S TSGTTVGYARS+GT
Sbjct: 393 GVHTGTNSLNGIGGLWGASASLVHGEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGT 452

Query: 421 NVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISR 480
           NVSSASLYSAPNIYDEVHGNNDEGN+FYGHSSWQ LPTELEDSSS+GFGLGNAASDVISR
Sbjct: 453 NVSSASLYSAPNIYDEVHGNNDEGNSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISR 507

Query: 481 NNAGYTVGYGVSNRQSNRG 500
           NN GYTVGYGVSNRQSNRG
Sbjct: 513 NNGGYTVGYGVSNRQSNRG 507

[Close]
BLAST of CcUC01G010770 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 440.7 bits (1132), Expect = 1.9e-123
Identity = 278/522 (53.26%), Postives = 332/522 (63.60%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDT+E+RL+EYF SFGEV+E +I++DRTTGRARGFGFVVFADP VA  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSR-NNTGILG 121
           + EKH IDGR                         VEAKKAVPRDDQN+++R N++ I G
Sbjct: 64  ITEKHNIDGRL------------------------VEAKKAVPRDDQNMVNRSNSSSIQG 123

Query: 122 SP-GPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESE 181
           SP GP RT+KIFVGGL S+VTESDFK YF+QFGT  DVVVMYDHNTQRPRGFGFITY+SE
Sbjct: 124 SPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSE 183

Query: 182 ESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLG-GYPYSFGRVGSYLNAYNQGY 241
           E+VEKVL KTFHELNGKMVEVKRAVPKE SP P+R+ LG GY Y   RV + LN Y QG+
Sbjct: 184 EAVEKVLLKTFHELNGKMVEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGF 243

Query: 242 NPTSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYG 301
           NP +VGGYG R DGRFSPV  GR G +  S GYG+ +N D GL   +  G N + N+ YG
Sbjct: 244 NPAAVGGYGLRMDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYG 303

Query: 302 RVMSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVG----NSAGTNSSHLR 361
           R MSP Y GN +R+G P     GG  GGN S  SS  +NLWGN G    N+  TNS+   
Sbjct: 304 RGMSPYYIGNTNRFG-PAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNS-N 363

Query: 362 TFPG--SGGVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTV 421
           T+ G  S G +T +    + G  WGA    G G NA S  N      G+G++ F  GT  
Sbjct: 364 TYMGGSSSGNNTLSGPFGNSGVNWGAP---GGGNNAVSNENVKFGYGGNGESGFGLGTGG 423

Query: 422 GYARSIGTN----VSSASLYSAPNI--YD-----EVHGNNDEGNTFYGHSSWQSLPTELE 481
             AR+ G N     SS S  SA N   YD     E +GN       Y   +W+S   E E
Sbjct: 424 YAARNPGANKAAPSSSFSSASATNNTGYDTAGLAEFYGN----GAVYSDPTWRSPTPETE 483

Query: 482 DSSSIGFGLGNA--ASDVISRNNA-GYTVGYGVSNRQSNRGE 501
             +   +G+G    +SDV +R+++ GY   Y V+ RQ NRGE
Sbjct: 484 GPAPFSYGIGGGVPSSDVSARSSSPGYVGSYSVNKRQPNRGE 492

[Close]
BLAST of CcUC01G010770 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 438.7 bits (1127), Expect = 7.2e-123
Identity = 277/521 (53.17%), Postives = 331/521 (63.53%), Query Frame = 0 

Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDT+E+RL+EYF SFGEV+E +I++DRTTGRARGFGFVVFADP VA  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSR-NNTGILG 121
           + EKH IDGR                         VEAKKAVPRDDQN+++R N++ I G
Sbjct: 64  ITEKHNIDGRL------------------------VEAKKAVPRDDQNMVNRSNSSSIQG 123

Query: 122 SP-GPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESE 181
           SP GP RT+KIFVGGL S+VTESDFK YF+QFGT  DVVVMYDHNTQRPRGFGFITY+SE
Sbjct: 124 SPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSE 183

Query: 182 ESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLG-GYPYSFGRVGSYLNAYNQGY 241
           E+VEKVL KTFHELNGKMVEVKRAVPKE SP P+R+ LG GY Y   RV + LN Y QG+
Sbjct: 184 EAVEKVLLKTFHELNGKMVEVKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGF 243

Query: 242 NPTSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYG 301
           NP +VGGYG R DGRFSPV  GR G +  S GYG+ +N D GL   +  G N + N+ YG
Sbjct: 244 NPAAVGGYGLRMDGRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYG 303

Query: 302 RVMSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQNLWGNVG----NSAGTNSSHLR 361
           R MSP Y GN +R+G P     GG  GGN S  SS  +NLWGN G    N+  TNS+   
Sbjct: 304 RGMSPYYIGNTNRFG-PAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNS-N 363

Query: 362 TFPG--SGGVHTGTNSLNSIGGLWGASASLGHGENAGSQFNTANLDFGSGDASFTSGTTV 421
           T+ G  S G +T +    + G  WGA    G G NA S  N      G+G++ F  GT  
Sbjct: 364 TYMGGSSSGNNTLSGPFGNSGVNWGAP---GGGNNAVSNENVKFGYGGNGESGFGLGTGG 423

Query: 422 GYARSIGTN----VSSASLYSAPNI--YD-----EVHGNNDEGNTFYGHSSWQSLPTELE 481
             AR+ G N     SS S  SA N   YD     E +GN       Y   +W+S   E E
Sbjct: 424 YAARNPGANKAAPSSSFSSASATNNTGYDTAGLAEFYGN----GAVYSDPTWRSPTPETE 483

Query: 482 DSSSIGFGLGNA--ASDVISRNNA-GYTVGYGVSNRQSNRG 500
             +   +G+G    +SDV +R+++ GY   Y V+ RQ NRG
Sbjct: 484 GPAPFSYGIGGGVPSSDVSARSSSPGYVGSYSVNKRQPNRG 491

[Close]
BLAST of CcUC01G010770 vs. TAIR 10
Match: AT5G47620.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 386.7 bits (992), Expect = 3.2e-107
Identity = 244/505 (48.32%), Postives = 306/505 (60.59%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGRTM-SFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGIL 120
           VVL KH+IDG+ +   +  +  C  D     +     VEAKKAVPRDD  + +++N+ + 
Sbjct: 63  VVLLKHIIDGKILVDSIVYNQLCRSDKCISLSE---VVEAKKAVPRDDHVVFNKSNSSLQ 122

Query: 121 GSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESE 180
           GSPGP+ +KKIFVGGLAS+VTE++FKKYF QFG I DVVVMYDH TQRPRGFGFI+Y+SE
Sbjct: 123 GSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSE 182

Query: 181 ESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYN 240
           E+V+KVL KTFHELNGKMVEVK AVPK+ +    RNQ+    +   R+ S LN Y QG++
Sbjct: 183 EAVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFS 242

Query: 241 PTSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGR 300
           P+ + GYG + + R+SP    RGG SP   GYGI LN +     NYG+G    S+  +GR
Sbjct: 243 PSPISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG----SSGGFGR 302

Query: 301 VMSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQN-LWGNVGNSAGTNSSHLR-TFP 360
             SP Y  +L R+GS   M  GG S GNGS+L+++ +N LWGN G    +NS   R +F 
Sbjct: 303 PFSPGYAASLGRFGS--QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFS 362

Query: 361 GSGGVHTGTNSLNSIGGLWGASA---SLGHGENAGSQFNTANLDFGSGDASFTSGTTVGY 420
           G+ G+    +SL SIG  WG  A   S  HGE  G                      VG 
Sbjct: 363 GNSGM----SSLGSIGDNWGTVARARSSYHGERGG----------------------VGL 422

Query: 421 ARSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAA 480
               G +V   S  S  +I         E ++ Y  S W SLP + E+      GLG   
Sbjct: 423 EAMRGVHVGGYS--SGSSIL--------EADSLYSDSMWLSLPAKAEE------GLGMGP 450

Query: 481 SDVISRNNAGYTVGYGVSNRQSNRG 500
            D +SR  AGY       NRQ N G
Sbjct: 483 LDFMSRGPAGYI------NRQPNGG 450

[Close]
BLAST of CcUC01G010770 vs. TAIR 10
Match: AT5G47620.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 383.3 bits (983), Expect = 3.6e-106
Identity = 242/504 (48.02%), Postives = 300/504 (59.52%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVL KH+IDG+                         VEAKKAVPRDD  + +++N+ + G
Sbjct: 63  VVLLKHIIDGKI------------------------VEAKKAVPRDDHVVFNKSNSSLQG 122

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGP+ +KKIFVGGLAS+VTE++FKKYF QFG I DVVVMYDH TQRPRGFGFI+Y+SEE
Sbjct: 123 SPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEE 182

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           +V+KVL KTFHELNGKMVEVK AVPK+ +    RNQ+    +   R+ S LN Y QG++P
Sbjct: 183 AVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSP 242

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           + + GYG + + R+SP    RGG SP   GYGI LN +     NYG+G    S+  +GR 
Sbjct: 243 SPISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG----SSGGFGRP 302

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQN-LWGNVGNSAGTNSSHLR-TFPG 360
            SP Y  +L R+GS   M  GG S GNGS+L+++ +N LWGN G    +NS   R +F G
Sbjct: 303 FSPGYAASLGRFGS--QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSG 362

Query: 361 SGGVHTGTNSLNSIGGLWGASA---SLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYA 420
           + G+    +SL SIG  WG  A   S  HGE  G                      VG  
Sbjct: 363 NSGM----SSLGSIGDNWGTVARARSSYHGERGG----------------------VGLE 422

Query: 421 RSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAAS 480
              G +V   S  S  +I         E ++ Y  S W SLP + E+      GLG    
Sbjct: 423 AMRGVHVGGYS--SGSSIL--------EADSLYSDSMWLSLPAKAEE------GLGMGPL 428

Query: 481 DVISRNNAGYTVGYGVSNRQSNRG 500
           D +SR  AGY       NRQ N G
Sbjct: 483 DFMSRGPAGYI------NRQPNGG 428

[Close]
BLAST of CcUC01G010770 vs. TAIR 10
Match: AT5G47620.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 383.3 bits (983), Expect = 3.6e-106
Identity = 242/504 (48.02%), Postives = 300/504 (59.52%), Query Frame = 0 

Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGRTMSFMECSSGCSFDSANEYARGAIKVEAKKAVPRDDQNILSRNNTGILG 120
           VVL KH+IDG+                         VEAKKAVPRDD  + +++N+ + G
Sbjct: 63  VVLLKHIIDGKI------------------------VEAKKAVPRDDHVVFNKSNSSLQG 122

Query: 121 SPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEE 180
           SPGP+ +KKIFVGGLAS+VTE++FKKYF QFG I DVVVMYDH TQRPRGFGFI+Y+SEE
Sbjct: 123 SPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEE 182

Query: 181 SVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNAYNQGYNP 240
           +V+KVL KTFHELNGKMVEVK AVPK+ +    RNQ+    +   R+ S LN Y QG++P
Sbjct: 183 AVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSP 242

Query: 241 TSVGGYGFRSDGRFSPVTVGRGGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRV 300
           + + GYG + + R+SP    RGG SP   GYGI LN +     NYG+G    S+  +GR 
Sbjct: 243 SPISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG----SSGGFGRP 302

Query: 301 MSPSYGGNLSRYGSPNPMVYGGGSGGNGSILSSSVQN-LWGNVGNSAGTNSSHLR-TFPG 360
            SP Y  +L R+GS   M  GG S GNGS+L+++ +N LWGN G    +NS   R +F G
Sbjct: 303 FSPGYAASLGRFGS--QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSG 362

Query: 361 SGGVHTGTNSLNSIGGLWGASA---SLGHGENAGSQFNTANLDFGSGDASFTSGTTVGYA 420
           + G+    +SL SIG  WG  A   S  HGE  G                      VG  
Sbjct: 363 NSGM----SSLGSIGDNWGTVARARSSYHGERGG----------------------VGLE 422

Query: 421 RSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQSLPTELEDSSSIGFGLGNAAS 480
              G +V   S  S  +I         E ++ Y  S W SLP + E+      GLG    
Sbjct: 423 AMRGVHVGGYS--SGSSIL--------EADSLYSDSMWLSLPAKAEE------GLGMGPL 428

Query: 481 DVISRNNAGYTVGYGVSNRQSNRG 500
           D +SR  AGY       NRQ N G
Sbjct: 483 DFMSRGPAGYI------NRQPNGG 428

The following BLAST results are available for this feature:
BLAST of CcUC01G010770 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038894700.11.3e-26293.79heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida] >XP_038894701.1 he... [more]
XP_022142553.13.9e-25691.18heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia] >XP_022142555.1 ... [more]
XP_008463611.11.1e-25591.38PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo][more]
KAA0035665.11.1e-25591.38heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYK30878.1... [more]
XP_031745329.13.1e-25390.58heterogeneous nuclear ribonucleoprotein 1-like [Cucumis sativus] >KGN65038.1 hyp... [more]
BLAST of CcUC01G010770 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W0341.1e-5635.86Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... [more]
Q96DH62.9e-4436.96RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1[more]
Q920Q68.4e-4436.00RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1[more]
Q9VVE55.1e-4144.44RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=R... [more]
Q9C6521.1e-4039.44RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1[more]
BLAST of CcUC01G010770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CL941.9e-25691.18heterogeneous nuclear ribonucleoprotein 1 OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A5D3E5165.5e-25691.38Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3CK545.5e-25691.38heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10350172... [more]
A0A0A0LTE81.5e-25390.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181500 PE=4 SV=1[more]
A0A6J1EKS03.5e-25089.18heterogeneous nuclear ribonucleoprotein 1-like isoform X1 OS=Cucurbita moschata ... [more]
BLAST of CcUC01G010770 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07810.21.9e-12353.26RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G07810.17.2e-12353.17RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G47620.43.2e-10748.32RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G47620.13.6e-10648.02RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G47620.23.6e-10648.02RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 5..76
e-value: 4.4E-22
score: 89.4
coord: 129..201
e-value: 1.8E-24
score: 97.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 6..70
e-value: 4.3E-15
score: 55.3
coord: 130..188
e-value: 1.8E-16
score: 59.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 128..205
score: 17.966896
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 4..80
score: 17.028851
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 125..214
e-value: 7.0E-27
score: 95.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 3..108
e-value: 1.2E-23
score: 85.1
NoneNo IPR availablePANTHERPTHR48032RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6coord: 1..73
NoneNo IPR availablePANTHERPTHR48032RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6coord: 96..500
NoneNo IPR availablePANTHERPTHR48032:SF1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1-LIKEcoord: 96..500
NoneNo IPR availablePANTHERPTHR48032:SF1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1-LIKEcoord: 1..73
IPR034131DAZ-associated protein 1, RNA recognition motif 2CDDcd12327RRM2_DAZAP1coord: 126..205
e-value: 1.21553E-46
score: 156.372
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 124..226
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 3..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G010770.1CcUC01G010770.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding