CcUC01G009070 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G009070
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pre-mRNA-splicing factor 38
Location	CicolChr01: 10172700 .. 10180351 (-)
RNA-Seq Expression	CcUC01G009070
Synteny	CcUC01G009070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTAAAGACATACCATGAAGTGGTTGATGAGATTTATAACCAAGTTGATCATGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGGTAGGTGGAATCCTTTTGACCTTTAATAATCATGTTTATAGTAAAGACGTAAGATATTGTTTTGTAGCATTTCTGTCATGGTCCATCTATTCATTTTCTTTTTTTGTAAATATATAATGTGGTGCATACCAATACGGAGAGGAGGGAAATTATTCTGATCTTTTATTAAGAAAATATAGAGCTAGTATTTGTACTCACGTTCATGGTCAACCAACAAAGTTACTGTAGGTAACTTGAGAAACTTAACAGTAACTCATGCTATAAAACAGATGTAAAATTCCAATGTAAACAGAAACAAACCACATCGTGATGGACATTAAGACTTACAGTCTGACAGCTTGCAATGTGTATATTTTTGAAGAGTTAATTAATTTTCTCCGATGTTGCATGTACTTTTACAATCATTGCTGTGCTCTGGAAAAATATTAATATATTATATCTAGTTTGGAACTTGGATTAGTAACATACAAGTTGGATCAAATATAGCTGATGTAAATGGTTTACTATGGCAATTAGTTAACTTCAGTGTAATTGGGACAACCAGAGGTAGATTTTGAAGTGCATTCTTGAGGTATCTGTTTCCTAGAGTTCTTGAGGGCATTCTTGAGCATGATTAGATTCTTTATCTTTTCATCATATTTACATTATAATGCATTTCAGCTTGATCTTTGTTGGTAGAAGTAGTAATCCATGGATCTTCACATAATCTGGATTGCTAATTGCTTTTGCTTTTGTCTTTTTATTTTCTTTACAAGTTTCTGTTGCGTTTGAGGATTGCTAGTTGATTAATCAGTTTCCATCTGTACTTCTAAATATTTAGTTCTCTCTCAAATTTCGGATGTTCAATGAATAAATAACTTGTTTTTGGAGGTTCTTGGTTATTGTCACCTAGAACAACTACTAATCTAACCTAATTTACTGTTTGAAAATATGTTGGAGAATAGCTCTTCGTATACTGATGTGTTTGGGTTGCTCTCTTTCTAAGTCCCACTTTATTCTATCGCTTCAATTTTGTCCTTTATGGTCTGATGGTTCTGTTGTACTAGAATCATTGGTACCCGATATGAACGTTGCTCTTTATCCTCTCCCCAAACACAAGGGAAAAGGAGTCTCTTTGTGAACAGAAAATTTTCTTCTGCCATCAACAATTCCCCAATTCCCTGCTAAGAAGATTACTAGAGAAGCTTTCCAACTATCCTTATAAAACAATAAAACAGAATAATTGCAAGAAGACCCGAGCCAAAAAGCTTGATCCTGAAGTATGAAGTAAATTAGGTAAAAATTGTCATGAGGTTTCTACATTTTCCTTGAAACATTTGTAGGTTTCTTTTTTATAGAAGTGCCCCCATCTGTCGGTTTTATTCTACTTGTATAATAAAATAGCTGAATGTTGAATATTATTATGATGAATTACAAAACTATTTTTCCTTGATATCAAAGCGTTTTTTTCCATAAGCATTCTCAATGCATGAAAAATTTATCATTCAAAAGAATAGCATCAGTCATAAAACCTCAACTGCTTTTAAATAATACAGAATGAGAATAGTTTTATGGAATAACTTGCTAGTAATCAGAGTTAGCCCTAAGTTCGTGGAAGTGATTAAGGATCGGTTTTTAGAAGATGTCAAAATCACCAATGAATATGTCTTGAGAGCTGTTGGTTATTATGGATTTTAGAATGGTAAAATGCTGATGCAATAAGCAGAATGTTTGATTAGGTTTAAATGTCTGCTTAAACAATTTTTTCTATGAAAAGAAAGTTTAGCTTGTGATCATGCTGCAGTCGGGTTCTCTTTCTTATTCAAATACGGTAATAAACCATTTTAGCAAGTCTTCAATTAGGAGCAGAGGTCTCCTCTCTCTCTCTCTCTTAAATTTATTATTCTGAGTCAACTTAATGGTTGTGCTATTATTTGGATTAAATATTTTTAGTGGACTTTATATTAGAAATTATTTTGGGATCCTCACTGATGTTTGTCTTTTGCCCTTTATGCTAGTTCCTGCATTACTCTATTTCTTTAGCTTATTAAACTGTCTGATACATGCATATGCTTGGTAACATTCTTGCCTTGCTCACCAGATGTTATGAACAAAGGATGAACCTTGTCACTTTGGGTTGCTGTGCCCTTTCTCACACCATAAATTAATAGTGCCTTTGCTTTGCTTTGCAGTTATCTAAGGTTTGAGGTGACCTTTTTTTTTATTTTTATTTTCTAAAGATACTGAGAGTATTTCAGTCCCTTGGATTTATTTATATGTAAATTGATATTCTTTAATGAGTGCACAATGTTTCCCGTATGAATATTGCATCCTTTTGTTTTATGCTCTTAATAAGGTCAGAATACATCAAAGGAATTAATGTGGTTACTTATATTCTTGCATGCCTCTCTTTCTGCATAATTTATTTTCTTATCTGATAATTATGATCCCTTTATCTGTCCGATGTTTAAGAAGTTATGGTTCTAGTGGTATTACACTTGGTTCTGCTACCTTATGATGAAATTTCTTAAATTATTTTTTCCAGATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGTATGTGAACTGATGCATATATGAGCTTGATTATTATTATTATTTTAATTTTGTGGATTGTTGCTAAAGCATTATGGTTAGGTTGCATGTGTTTCGCTTAAAATTTCCTTTAATGTGACTGTAAGTTGCTTTCTGGTTTCTGCTACCTTCAATGTATGTATATATGCTGATAATTTAGTAAGCGCAGACTGATTTTCTATATTATTGAGATGTCATATATGCTTGTGAAGGTATTTGGACTTGAGGCCGTTGATACTTTCTAACCTAGGAATTACTTGATGTCCTTTAATTTGACTTTCTTCTGCAACCCCTTCTTTTGGGGGGCATTCATATGACCCCTCCTTTGGAGAAGGGACACCTTGTCCCTTTGTCTGTTAGGCTGTTTTGGCTGGGTTGGTGCCGTTTGAGTGAAGTTAAATTACAAAAGAGGCACTAGTGTCCATATGATTTACAAGAAATATTGCCAATAAGCTGAGAGAGAAGTAAGGCTATGGTCTCAAAAAGAGGGGANTTTTCTCAATGAACATTGTTGTTTCTAATAAAATAAAAAAAAAATTAAAAAAAGTGAAAAAAAAAAGAGAAACAAACAAATACGGATATTACAAACCAATATGGATGTGTCAAAAAGATTTCCATTCAAATGCTTAAGCCAATCCCTTGCAAGAGCACATACCAATTCATATAAATTATTAAGTACCAACAAAAATGGAGCATTTCAAAAATCAAAATTACTTAGGTCACATTTGATAACCATTTTGTTTTATTCAAAATGGGGCCTTAGTGATTCCATGACAGTGGAAATGAGGACTAAATTAATAGAGTTTATAATCAGTTCAACATTAATAAATTGGGGTTTCTTGCTCCCGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGTGGGGTTGTATGGAGAGGTCAGTAAAGGTACTGATAAGTAAGAGGCACATGGCTTTTGGAGGTTCCAAAAAGGTAAGAGGTAACTCCGGCGGCTTTGGCTTTGGGCAGTTAGACATCAGCAATGTGACCAATGGAGTAGCCTAGTCTTCATTGAAGTTTAACTTTTTCTTACCTAGAAAAAATTGGACTTCCTACTACAAAAGTTGGAATTCACTGTGCATGATGAATGTATTTCCAACGTTTCTTCTCTGGCATGAGTTTATTTGTGGTATTTTGTTGATTATCAATTGCTTTGAGTGATAAGTGCATTAAATAGTCCACCGCTGAACTCTGAAGATACTTGCCTCCTCTTGGTGAATGAGAAGTCTTTTATGGGGTTCTTATCTTTGTTTCATCATCCTGAATTCACCACCGGTTGGTCTTTTGTTTGGAAACCCAAAGTCCTCATTATTCGTGGCTTTTACTATTGCTGGTAATGTTTGACCTGTTGATATCAAGATCATCAATGAGTAATCCTGCTGTTCTCTTTAATTATCACACAGTTGGCTTCAAAATTCGAAATTCTCTTCAACGCTTCTTTTGGTCCGGAATTCAAAGTGGTCTTTCCTCTTTGATGAGTTGGATTGTTAAGATATCCATGAAATTTTAAGTTCTTTGCTTGGCAAGTTTTGCATGGAAAAGTGAACGTCCAAAACCATCTCAAGAGATTTTTCCCTTGTGATGCACGCGCAATGCACGTTCTCTATAGGCAGTTAGACGAGGATCTTGAACATTTTTTGTGAGGTTGCTAGTTTGCTTATTCCCTTGGAGTTGATGCTTGAAGTCGTTTGGGATTTGTTTGGCTCTTAGCAAAAATTGCAGCTTTATGATTGAGGAGGCTCTCTTGAACTTTCCCTTCTAGAATAAGTGTAGCATTCTGTGGCATGGATTTTTTGTTTTTGCTAGTTTTTGCGGAATTTGGCTAGTGATGAAAAGTAGGATTTATTGAGGGGTGAATAGATCCTGGGAGGAGGTTGCTAGGTCTAATGCTTTTTTATGGGCGTTCACTACTTAAGCTTTTGTAATTACTAACCTCTTATTCTTGTGGATTGGAGTCTCTTCTTGTAGTTATTGTTAGGACGTGTTTATGGTTTTTTTTCCTTGTACTTCTTTCATTTTTATAGAATGAAAGTTTGGTTTCTTATAAACAAAAATCGTAGCCAGTTTTTCCTAGGGATGGTTTGTGGTAAGTGGGATTTGGAAGTGTATATTCTCTTGCCTCCTTTTGGGCCTTTCCAGTGAACACCCTTTTCATCGTTCTACAGCTCATATAGTCTATCAGAGAAATCTTTTGTTACTCCTTTGGTTTGGGATCAGGGATCCTACCGTTTTTAGTAAATTTCACATCAGAGGAATTTGTTTCTTTTATAAAAAAGCAAAGTAAACAGCCTTTTCATGTCTTTTTTCATTTGCTGGTTGTAGTCCTTTTCCCCTTCCGACAAATATCAGAAAATAAAATTCTTCCTTACAAATCTATGGCTTTTTGCATGTTTTCATTTTTAATGGATTTAATAAGAATCTAAAACTATTTTTAATGGAATTAATAAGAATCTAAAGCTATAAAAGGCAGAAAAAGAACTAACAGGCTTATCACTTATGTGTTTCAGGAATTTTCACCAGGATCCCATGGACGAATGACTACAATGGGTGTTTATGTCCGTGATTTGCTCCTTGGACAGGTCAGGTTATATACCAACATTTTCCCCTTAATTATCTTGTTTATTGCTCATATCTTTCTTTTTTTTCCTTTTTAACATCCTTGCGTCACAGACATGATAAGTTGTGTGTATATACAGTTGCTGTTGGCATTTCACTAGTGTTTAACCATGGGAATGCTACATTGTTGATTCATGGTTGGAAGATATTGTTAAGAGTTGCATATAGAGTATAATATAGTTAAAAGATTTTCATCAAGAGACAAGAAGATGCAAAAAGGTTCAGGAAAACAACTACAGCATAACAGTAACCTTTCCCTCCCGATTTAAGTAATTAGGTCCTCGTTTCCATTAAACCATCTCATATTTTGTTGGTTTATCATGGTGATTCAAAGCCATGTTCTCTGGCATGAGCTGGTGAAGTTGACTTCACAATGTGCCGTTTGGTGTCTTGTCCACTTTATTGTTGTCTTCATTTTTGTTATGTCTTTTCCAATGTATCCAGTATTTTTCTTAACTTTCCTTATATAACCTTTTCTTGTAGTTCTATTTCCCACTTATGCTCCTTGTAGACTAGAAGGAGCCTTTTACATGAAGTATGGTTGTGTTGGCTTTTACCTGTGATACACTCCAGAGCTCTGCCCCTTCATGAACTTTCCTTACATTATTTCAAAATCCAGATCATGAATAAAATGCTTTATGGAATGTTCTTGAAATATTTAAATCAATCATTGTTTGGGTTCGATTGTTGCTCTGTTGTAGTATATGGTGAAAAGAGATGAATCAAGTGTATAAGATGAATAAAATGAAATATGAGACCAAGGTTTTGATTTTATCACATTGTTGTTATCTAGAAGTGGTTTAACTCATGTGAACAGCCCTCAATACCTTTTCTTTGTTCAGCCATAGCCGCACAACTATTCGAGAATAGGAGCAAACTGAAATGTTGTGTGTTTTAATGCTTAATCAGTAGAAAGCTGATGTAAATCTTGATATCTATGTATGGGTTTGCATATGGCCAACTGAGCGGAATTATAGTTAAAGCTTTTATTTTATTTGTCTTTTTAGCTTTTAAACGGCAGAAATTGTGTTTGGTGTTATCTGGTGGTATTAATGTTTCTATTATGTCTGCCAACAAACGGAATGATCATTATTCCACATGTTTAAACTGGAACATATGAAACACATATCTGCCTTTAGACATATTATTATTGTTATTTTTGAATCCTCGTCCTTGTAGCTAAGCAGGTACCCACGTTTTGTTTGCCAATTGCAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTTGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGGCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGATTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATGTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGACAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGAGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGATAGAGAAAGAGAGAGAGCTAGAGATAGGGACAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTCGAAAGGAGTAGCCGTGATGGTGGCTCCAGGTATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

mRNA sequence

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTAAAGACATACCATGAAGTGGTTGATGAGATTTATAACCAAGTTGATCATGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGGTAGGTGGAATCCTTTTGACCTTTAATAATCATGTTTATAGTAAAGACATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGAATTTTCACCAGGATCCCATGGACGAATGACTACAATGGGTGTTTATGTCCGTGATTTGCTCCTTGGACAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTTGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGGCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGATTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATGTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGACAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGAGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGATAGAGAAAGAGAGAGAGCTAGAGATAGGGACAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTCGAAAGGAGTAGCCGTGATGGTGGCTCCAGGTATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

Coding sequence (CDS)

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTAAAGACATACCATGAAGTGGTTGATGAGATTTATAACCAAGTTGATCATGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGGTAGGTGGAATCCTTTTGACCTTTAATAATCATGTTTATAGTAAAGACATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGAATTTTCACCAGGATCCCATGGACGAATGACTACAATGGGTGTTTATGTCCGTGATTTGCTCCTTGGACAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTTGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGGCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGATTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATGTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGACAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGAGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGATAGAGAAAGAGAGAGAGCTAGAGATAGGGACAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTCGAAAGGAGTAGCCGTGATGGTGGCTCCAGGTATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

Protein sequence

MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRYVADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRDRDRGRDRDRDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRYYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGGSWK

Homology

[Close]

BLAST of CcUC01G009070 vs. NCBI nr
Match: XP_038875168.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida] >XP_038875169.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 787.3 bits (2032), Expect = 7.0e-224
Identity = 427/469 (91.04%), Postives = 435/469 (92.75%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLW WFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWTWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VV+NLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVANLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDS----------RERSRDRDYDRERSRD 300
           RRTLPPS NDRD SDD+RRSPSSRRSQSREHPDS          RERSRDRDYDRERSRD
Sbjct: 241 RRTLPPSANDRDNSDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDYDRERSRD 300

Query: 301 RDHDRDRDRGRDRDRDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYDRR 360
           RDHDRDRDRGRDRDRDRE+DRDREKYRDRERDRDR+RER R R+RDR+RDRERSYDYDRR
Sbjct: 301 RDHDRDRDRGRDRDRDREYDRDREKYRDRERDRDRERERARDRERDRERDRERSYDYDRR 360

Query: 361 THYTDRESRRDFERSSRDGGSRYYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTE 420
           THY DRESRRDFERSSRDGGSR+YRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTE
Sbjct: 361 THYNDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTE 420

Query: 421 KTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGGSWK 460
           KTS ISSNLAKLKDIYGDVSEQKGDSS+ERVNRRDSSGEEVIRLGG WK
Sbjct: 421 KTSSISSNLAKLKDIYGDVSEQKGDSSKERVNRRDSSGEEVIRLGGYWK 453

[Close]

BLAST of CcUC01G009070 vs. NCBI nr
Match: XP_011655154.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_011655155.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_031742200.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_031742201.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_031742202.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >KGN51086.2 hypothetical protein Csa_023135 [Cucumis sativus])

HSP 1 Score: 767.3 bits (1980), Expect = 7.4e-218
Identity = 415/459 (90.41%), Postives = 430/459 (93.68%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNWFEPYVKD+EEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRDRDRG 300
           RRTLP S NDRD +DD+RRSPS RRSQSREHPDSRERSRDR++DRERSRDRD+DRDRDRG
Sbjct: 241 RRTLPSSANDRDNNDDLRRSPSIRRSQSREHPDSRERSRDREFDRERSRDRDYDRDRDRG 300

Query: 301 RDRDRDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYDRRTHYTDRESRR 360
           RDRDRDREHDRDREKYRDRERDRDR+RE+ R R+RDR+RDRERSYDYDRRTHY+DRESRR
Sbjct: 301 RDRDRDREHDRDREKYRDRERDRDREREKARDRERDRERDRERSYDYDRRTHYSDRESRR 360

Query: 361 DFERSSRDGGSRYYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLA 420
           DFERSSRDGG+R+YRRSRSRSRSRSRSRSLQT   HHEREPSPARGGTTEK S+ISSNLA
Sbjct: 361 DFERSSRDGGTRHYRRSRSRSRSRSRSRSLQT---HHEREPSPARGGTTEKASVISSNLA 420

Query: 421 KLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGGSWK 460
           KLKDIYGDVSEQKGDSS  +VNRRD SGEEVIRLGGSWK
Sbjct: 421 KLKDIYGDVSEQKGDSS--KVNRRDGSGEEVIRLGGSWK 438

[Close]

BLAST of CcUC01G009070 vs. NCBI nr
Match: XP_022993767.1 (pre-mRNA splicing factor SR-like 1 [Cucurbita maxima])

HSP 1 Score: 757.3 bits (1954), Expect = 7.7e-215
Identity = 417/474 (87.97%), Postives = 433/474 (91.35%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNW EPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWVEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VV+NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVANLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDR----- 300
           RRTLP S  DRD SDD+RRSPSSRRSQSREHPD+RERSRDRDYDRERSRDRD+DR     
Sbjct: 241 RRTLPTSAIDRDNSDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRD 300

Query: 301 ---DRDRGRDRDRDREHDRDREKYRDRERDRDRDRERERARD--RDRDRDRERSYDYDRR 360
              DRDRGRDRDR+REHDRDREKYRDRERDR+RDRERE+ARD  RDR+RDRERSYDYDRR
Sbjct: 301 REYDRDRGRDRDREREHDRDREKYRDRERDRERDREREKARDRERDRERDRERSYDYDRR 360

Query: 361 THYTDRESRRDFERSSRDGGSRYYRRSRSRSRSRSRSRSLQTG---NAHHEREPSPARGG 420
           THYTDRE RRDFERSSRDGG+R+YRRSRSRSRSRS SRSLQTG   + HHEREPSPARG 
Sbjct: 361 THYTDREGRRDFERSSRDGGTRHYRRSRSRSRSRSSSRSLQTGVNAHGHHEREPSPARGR 420

Query: 421 TTEKTSIISSNLAKLKDIYGDVSEQK--GDSSRERVNRRDSSGEEVIRLGGSWK 460
           T+EKTSIISSNLAKLKD+YGDVSEQK  GD S+ER+NRRDSSGEEVIRLGGSWK
Sbjct: 421 TSEKTSIISSNLAKLKDMYGDVSEQKGGGDPSKERINRRDSSGEEVIRLGGSWK 458

[Close]

BLAST of CcUC01G009070 vs. NCBI nr
Match: KAG7016573.1 (Pre-mRNA splicing factor SR-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 755.7 bits (1950), Expect = 2.2e-214
Identity = 417/480 (86.88%), Postives = 433/480 (90.21%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNW EPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWVEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VV+NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVANLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDR----- 300
           RRTLP S  DRD SDD+RRSPSSRRSQSREHPD+RERSRDRDYDRERSRDRD+DR     
Sbjct: 241 RRTLPTSAIDRDNSDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRD 300

Query: 301 ---DRDRGRDRDRDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYDRRTH 360
              DRDRGRDRDR+REHDRDREKYRDRERDR+RDRERE+A  RDR+RDRERSYDYDRRTH
Sbjct: 301 REFDRDRGRDRDREREHDRDREKYRDRERDRERDREREKA--RDRERDRERSYDYDRRTH 360

Query: 361 YTDRESRRDFERSSRDGGSRYYRRSRSRSRSRSRSRSLQT-------GNAHHEREPSPAR 420
           YTDRE RRDFERSSRDGG+R+YRRSRSRSRSRSRSRSLQT       G+ HHEREPSPAR
Sbjct: 361 YTDREGRRDFERSSRDGGTRHYRRSRSRSRSRSRSRSLQTGVNAHGHGHGHHEREPSPAR 420

Query: 421 GGTTEKTSIISSNLAKLKDIYGDVSEQK------GDSSRERVNRRDSSGEEVIRLGGSWK 460
           G T+EKTSIISSNLAKLKD+YGDVSEQK      GDSS+ER+NRRDSSGEEVIRLGGSWK
Sbjct: 421 GRTSEKTSIISSNLAKLKDMYGDVSEQKGGGGGGGDSSKERINRRDSSGEEVIRLGGSWK 462

[Close]

BLAST of CcUC01G009070 vs. NCBI nr
Match: TYK18924.1 (pre-mRNA-splicing factor 38B [Cucumis melo var. makuwa])

HSP 1 Score: 752.3 bits (1941), Expect = 2.5e-213
Identity = 416/489 (85.07%), Postives = 431/489 (88.14%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNWFEPYVKD+EEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDS-------------------------- 300
           RRTLP SVNDRDI+DD+RRSPS+RRSQSREHPDS                          
Sbjct: 241 RRTLPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRD 300

Query: 301 ----RERSRDRDYDRERSRDRDHDRDRDRGRDRDRDREHDRDREKYRDRERDRDRDRERE 360
               RERSRDRDYDRERSRDRD+DRDRDRGRDRDRDRE DRDREKYRDRERDRDR+RE+ 
Sbjct: 301 RDYDRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKA 360

Query: 361 RARDRDRDRDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRYYRRSRSRSRSRSRSRSL 420
           R R+RDR+RDRERSYDYDRRTHY+DRESRRDFERSSRDGG+R+YRRSRSRSRSRSR RSL
Sbjct: 361 RDRERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSRSRSRSRGRSL 420

Query: 421 QTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEE 460
           QT   HHERE SPARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++NRRDSSGEE
Sbjct: 421 QT---HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDSSGEE 468

[Close]

BLAST of CcUC01G009070 vs. ExPASy Swiss-Prot
Match: Q8RWB1 (Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 5.1e-129
Identity = 288/461 (62.47%), Postives = 331/461 (71.80%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRYV 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRAV                GFLYLRYV
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAV----------------GFLYLRYV 122

Query: 122 ADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQV 181
           AD KTLW W+EPY+KD+EEFSPGS+GRMTTMGVYVRDLLLG YYFDTLFPRIPVPV+RQ+
Sbjct: 123 ADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQI 182

Query: 182 VSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVR 241
           VSNLEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVR
Sbjct: 183 VSNLEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVR 242

Query: 242 RTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRDRDRGR 301
           R  PP+  DR+  D+V++  S RRSQSR++        DRD DR+R R+R+ DR+R+RGR
Sbjct: 243 RP-PPTGYDRNGGDEVQQR-SPRRSQSRDY------YSDRDSDRQREREREKDRERERGR 302

Query: 302 DRDRDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYDRRTHYTDRESRRD 361
           DR            YR+RERD   DR   R              DYD R+       R D
Sbjct: 303 DR------------YRERERDYGNDRRSRR--------------DYDSRSR------RND 362

Query: 362 FERSSRDGGSRYYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTS--IISSNL 421
           +E    D  SR+ RRSRSRSRSRSRS  +       EREP+P R  + ++ S   ++SNL
Sbjct: 363 YE----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSAVTVNSNL 393

Query: 422 AKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG-SWK 460
           AKLKD+YGD S QK D       R+DSS EEVI+LGG SW+
Sbjct: 423 AKLKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 393

[Close]

BLAST of CcUC01G009070 vs. ExPASy Swiss-Prot
Match: Q5VTL8 (Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.6e-48
Identity = 182/479 (38.00%), Postives = 243/479 (50.73%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIG 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA                +G
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRA----------------LG 177

Query: 134 FLYLRYVADPKTLWNWFEPYVKDEEEFS-PGSHGRMTTMGVYVRDLLLGQYYFDTLFPRI 193
           F+Y+RY   P  LW+WFE ++ DEE+       G + T+G  +R  L    +F TLFPRI
Sbjct: 178 FMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRI 237

Query: 194 PVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAS 253
           PVPV + +   ++      K  G  G    I      RR  S + SLS    +R+P R+ 
Sbjct: 238 PVPVQKNIDQQIKTRPRKIKKDGKEG-AEEIDRHVERRRSRSPRRSLS---PRRSPRRSR 297

Query: 254 TRDSSPVRRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDH 313
           +R  S  R     S  DR++  +  R    R ++ RE    R RS DR  +R RSR R+ 
Sbjct: 298 SR--SHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRER 357

Query: 314 DRDRDRGRDRD---RDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERS------ 373
            R R R RDR    RDR+ +R++E  R R RDRD D+ER   R+++R+R RERS      
Sbjct: 358 HRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSR 417

Query: 374 ---------YDYDRRTHYTDRESRRDFERSSRDGGSRYYRRSRSRSRS---RSRSRSLQT 433
                     D D R H  D+   +  ++ SR        RSRSRSR+   RSRSRS + 
Sbjct: 418 GEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEK 477

Query: 434 GNAH----HEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSS 448
            + H     E+    +R G+  +T  +  +  K +        +K   S+ER ++RD S
Sbjct: 478 SSKHKNESKEKSNKRSRSGSQGRTDSVEKS-KKREHSPSKEKSRKRSRSKERSHKRDHS 513

[Close]

BLAST of CcUC01G009070 vs. ExPASy Swiss-Prot
Match: Q80SY5 (Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.9e-47
Identity = 181/473 (38.27%), Postives = 242/473 (51.16%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 59  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 118

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIG 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA                +G
Sbjct: 119 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRA----------------LG 178

Query: 134 FLYLRYVADPKTLWNWFEPYVKDEEEFS-PGSHGRMTTMGVYVRDLLLGQYYFDTLFPRI 193
           F+Y+RY   P  LW+WFE ++ DEE+       G + T+G  +R  L    +F TLFPRI
Sbjct: 179 FMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRI 238

Query: 194 PVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAS 253
           PVPV + +   ++      K  G  G    I      RR  S + SLS    +R+P R+ 
Sbjct: 239 PVPVQKNIDQQIKTRPRKIKKDGKEG-IEEIDRHVERRRSRSPRRSLS---PRRSPRRSR 298

Query: 254 TRDSSPVRRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDH 313
           +R  S  R     S  DR++  +  R    R ++ RE    R RS DR  DR RSR R+ 
Sbjct: 299 SR--SHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLDRRRSRSRER 358

Query: 314 DRDRDRGRDRD---RDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSY----- 373
            R R R RDR    RDR+ +R++E  R R RDRD D+ER   R+RDR+R RERS      
Sbjct: 359 HRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGSDRERDRERSRERSKEQRSR 418

Query: 374 -DYDRRTHYTDRESR--RDFERSSRDGGSRYYRRSR----------SRSRSRSRSRSLQT 433
            D + + H  D+E R  RD ++ S+   SR   R R           RSRSRS+ +S + 
Sbjct: 419 GDGEEKKHKEDKEDRRHRDDKKESKKKHSRSRSRERKHRSRSRNAGKRSRSRSKDKSSRH 478

Query: 434 GNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRD 446
            N   E+    +R G+  +T  +     K +        +K   S++R ++R+
Sbjct: 479 KNESKEKANKRSRSGSQGRTGSVEKR--KREHSPSREKSRKRSRSQDRSHKRE 507

[Close]

BLAST of CcUC01G009070 vs. ExPASy Swiss-Prot
Match: Q6AXY7 (Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.9e-47
Identity = 182/467 (38.97%), Postives = 241/467 (51.61%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIG 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA                +G
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRA----------------LG 177

Query: 134 FLYLRYVADPKTLWNWFEPYVKDEEEFS-PGSHGRMTTMGVYVRDLLLGQYYFDTLFPRI 193
           F+Y+RY   P  LW+WFE ++ DEE+       G + T+G  +R  L    +F TLFPRI
Sbjct: 178 FMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRI 237

Query: 194 PVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAS 253
           PVPV + +   ++      K  G  G    I      RR  S + SLS    +R+P R+ 
Sbjct: 238 PVPVQKNIDQQIKTRPRKIKKDGKEG-VEEIDRHIERRRSRSPRRSLS---PRRSPRRSR 297

Query: 254 TRDSSPVRRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDH 313
           +R  S  R     S  DR++  +  R    R ++ RE    R RS DR  DR RSR R+ 
Sbjct: 298 SR--SHHRDGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSLDRGLDRRRSRSRER 357

Query: 314 DRDRDRGRDRD---RDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDY--- 373
            R R R RDR    RDR+ +R++E  R R RDRD D++R   R+RDR+R RERS +    
Sbjct: 358 HRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKDRGNDRERDRERSRERSKEQRSR 417

Query: 374 ---DRRTHYTDRESRRDFERSSRDGGSRYYRRSRSRSRS-RSRSRSLQTGNAHHEREPSP 433
              + + H  D+E RR   R  +    + + RSRSR R  RSRSRS   G     R    
Sbjct: 418 GEGEEKKHKEDKEDRR--HRDDKKESKKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKDK 477

Query: 434 A---RGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSS 448
           A   +  + EK++  S + ++ +   G V ++K + S  R   R  S
Sbjct: 478 ASKHKNESKEKSNKRSRSGSQGRT--GSVEKRKREHSPSREKSRKRS 498

[Close]

BLAST of CcUC01G009070 vs. ExPASy Swiss-Prot
Match: Q6P7Y3 (Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.1e-42
Identity = 181/498 (36.35%), Postives = 235/498 (47.19%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  N+LSS YFK +LY LKTYHEVVDEIY +V+HVEPW          TG C G  
Sbjct: 36  LNPMILTNVLSSPYFKVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVR 95

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIG 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSP IRA                +G
Sbjct: 96  GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHSDSPDIRA----------------LG 155

Query: 134 FLYLRYVADPKTLWNWFEPYVKDEEEFS-PGSHGRMTTMGVYVRDLLLGQYYFDTLFPRI 193
           F+Y+RY   P  L +W++ ++ DEEE       G + T+G  +R  L    +F TLFPRI
Sbjct: 156 FMYIRYTQPPPDLVDWYDEFLDDEEELDVKAGGGCVMTVGEMLRSFLTKLEWFSTLFPRI 215

Query: 194 PVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAS 253
           PVPV + +  ++                     +   R+PP             A   A 
Sbjct: 216 PVPVQKAIDQHM---------------------KSRPRKPPQKDEQEEEEEEATAAPAAD 275

Query: 254 TRDSSPVRRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSR---DRDYDRERSRD 313
           T      RR+  P           RRSPS R+SQ+R    S  R R     DY+ ER RD
Sbjct: 276 TGRHGDKRRSRTP-----------RRSPSPRKSQNRSRSRSHHRERHGASFDYELERERD 335

Query: 314 RDH------DRDRDRGRDRDRDREHDRDREKYR--DRERDRDRDRERERARDR------- 373
           R        DRDRDR RDR+RDRE DRDR + R  DR  +R R R RER R R       
Sbjct: 336 RQRKEREGKDRDRDRDRDRERDRERDRDRRRSRTPDRNAERRRSRSRERRRSRSTSRDKR 395

Query: 374 ----DRDRDRERSYDYDR-----RTHYTDRESRRDFERSSRDGGSRYY------------ 433
               DRD+DRE   + +R     R H+ DRE  +D +RS  +G  R +            
Sbjct: 396 TERKDRDKDREAESERERSRKKDREHHKDRERSKD-KRSKGEGEERRHKDDKEEKKHREE 455

Query: 434 -RRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQK 452
            R  RSRSRSR R    +  +    R  S +R    E+ +       K +  +    + K
Sbjct: 456 KRSKRSRSRSRDRKHKAERSSKKRSRSGSRSRQEAGEEKN------RKRERSHSKDRQHK 478

[Close]

BLAST of CcUC01G009070 vs. ExPASy TrEMBL
Match: A0A6J1JTS5 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111489677 PE=3 SV=1)

HSP 1 Score: 757.3 bits (1954), Expect = 3.7e-215
Identity = 417/474 (87.97%), Postives = 433/474 (91.35%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNW EPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWVEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VV+NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVANLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDR----- 300
           RRTLP S  DRD SDD+RRSPSSRRSQSREHPD+RERSRDRDYDRERSRDRD+DR     
Sbjct: 241 RRTLPTSAIDRDNSDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRD 300

Query: 301 ---DRDRGRDRDRDREHDRDREKYRDRERDRDRDRERERARD--RDRDRDRERSYDYDRR 360
              DRDRGRDRDR+REHDRDREKYRDRERDR+RDRERE+ARD  RDR+RDRERSYDYDRR
Sbjct: 301 REYDRDRGRDRDREREHDRDREKYRDRERDRERDREREKARDRERDRERDRERSYDYDRR 360

Query: 361 THYTDRESRRDFERSSRDGGSRYYRRSRSRSRSRSRSRSLQTG---NAHHEREPSPARGG 420
           THYTDRE RRDFERSSRDGG+R+YRRSRSRSRSRS SRSLQTG   + HHEREPSPARG 
Sbjct: 361 THYTDREGRRDFERSSRDGGTRHYRRSRSRSRSRSSSRSLQTGVNAHGHHEREPSPARGR 420

Query: 421 TTEKTSIISSNLAKLKDIYGDVSEQK--GDSSRERVNRRDSSGEEVIRLGGSWK 460
           T+EKTSIISSNLAKLKD+YGDVSEQK  GD S+ER+NRRDSSGEEVIRLGGSWK
Sbjct: 421 TSEKTSIISSNLAKLKDMYGDVSEQKGGGDPSKERINRRDSSGEEVIRLGGSWK 458

[Close]

BLAST of CcUC01G009070 vs. ExPASy TrEMBL
Match: A0A5D3D5T6 (Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00040 PE=3 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 1.2e-213
Identity = 416/489 (85.07%), Postives = 431/489 (88.14%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNWFEPYVKD+EEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDS-------------------------- 300
           RRTLP SVNDRDI+DD+RRSPS+RRSQSREHPDS                          
Sbjct: 241 RRTLPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRD 300

Query: 301 ----RERSRDRDYDRERSRDRDHDRDRDRGRDRDRDREHDRDREKYRDRERDRDRDRERE 360
               RERSRDRDYDRERSRDRD+DRDRDRGRDRDRDRE DRDREKYRDRERDRDR+RE+ 
Sbjct: 301 RDYDRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKA 360

Query: 361 RARDRDRDRDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRYYRRSRSRSRSRSRSRSL 420
           R R+RDR+RDRERSYDYDRRTHY+DRESRRDFERSSRDGG+R+YRRSRSRSRSRSR RSL
Sbjct: 361 RDRERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSRSRSRSRGRSL 420

Query: 421 QTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEE 460
           QT   HHERE SPARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++NRRDSSGEE
Sbjct: 421 QT---HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDSSGEE 468

[Close]

BLAST of CcUC01G009070 vs. ExPASy TrEMBL
Match: A0A6J1FF63 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111444923 PE=3 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.7e-213
Identity = 413/479 (86.22%), Postives = 433/479 (90.40%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNW EPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWVEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VV+NLEKLKLPSKHSGVTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVANLEKLKLPSKHSGVTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDH------- 300
           RRTLP S  DRD +DD+RRSPSSRRSQSREHPD+RERSRDRDYDRERSRDRD+       
Sbjct: 241 RRTLPTSAIDRDNNDDLRRSPSSRRSQSREHPDTRERSRDRDYDRERSRDRDYDRERSRD 300

Query: 301 -----DRDRDRGRDRDRDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYD 360
                DRDRDRGRDRDR++EHDRDREKYRDRERDR+RDRERE+A  RDR+RDRERSYDYD
Sbjct: 301 REYDRDRDRDRGRDRDREQEHDRDREKYRDRERDRERDREREKA--RDRERDRERSYDYD 360

Query: 361 RRTHYTDRESRRDFERSSRDGGSRYYRRSRSRSRSRSRSRSLQTG---NAHHEREPSPAR 420
           RRTHYTDR+ RRDFERSSRDGG+R+YRRSRSRSRSRSRSRSLQTG   + HHEREPSPAR
Sbjct: 361 RRTHYTDRDGRRDFERSSRDGGTRHYRRSRSRSRSRSRSRSLQTGVNAHGHHEREPSPAR 420

Query: 421 GGTTEKTSIISSNLAKLKDIYGDVSEQK-----GDSSRERVNRRDSSGEEVIRLGGSWK 460
           G T+EKTSIISSNLAKLKD+YGDVSEQK     GDSS+ER+NRRDSSGEEVIRLGGSW+
Sbjct: 421 GRTSEKTSIISSNLAKLKDMYGDVSEQKGGGGGGDSSKERINRRDSSGEEVIRLGGSWR 461

[Close]

BLAST of CcUC01G009070 vs. ExPASy TrEMBL
Match: A0A5A7TWJ6 (Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00850 PE=3 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.7e-212
Identity = 416/499 (83.37%), Postives = 431/499 (86.37%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNWFEPYVKD+EEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDS-------------------------- 300
           RRTLP SVNDRDI+DD+RRSPS+RRSQSREHPDS                          
Sbjct: 241 RRTLPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRD 300

Query: 301 --------------RERSRDRDYDRERSRDRDHDRDRDRGRDRDRDREHDRDREKYRDRE 360
                         RERSRDRDYDRERSRDRD+DRDRDRGRDRDRDRE DRDREKYRDRE
Sbjct: 301 RDYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRE 360

Query: 361 RDRDRDRERERARDRDRDRDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRYYRRSRSR 420
           RDRDR+RE+ R R+RDR+RDRERSYDYDRRTHY+DRESRRDFERSSRDGG+R+YRRSRSR
Sbjct: 361 RDRDREREKARDRERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSR 420

Query: 421 SRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRER 460
           SRSRSR RSLQT   HHERE SPARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  +
Sbjct: 421 SRSRSRGRSLQT---HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--K 478

[Close]

BLAST of CcUC01G009070 vs. ExPASy TrEMBL
Match: A0A1S3CIJ0 (Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103501359 PE=3 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 2.5e-211
Identity = 416/509 (81.73%), Postives = 431/509 (84.68%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRY 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA                IGFLYLRY
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA----------------IGFLYLRY 120

Query: 121 VADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180
           VADPKTLWNWFEPYVKD+EEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ
Sbjct: 121 VADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ 180

Query: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240
           VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV
Sbjct: 181 VVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPV 240

Query: 241 RRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDS-------------------------- 300
           RRTLP SVNDRDI+DD+RRSPS+RRSQSREHPDS                          
Sbjct: 241 RRTLPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRD 300

Query: 301 ------------------------RERSRDRDYDRERSRDRDHDRDRDRGRDRDRDREHD 360
                                   RERSRDRDYDRERSRDRD+DRDRDRGRDRDRDRE D
Sbjct: 301 RDYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELD 360

Query: 361 RDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYDRRTHYTDRESRRDFERSSRDGG 420
           RDREKYRDRERDRDR+RE+ R R+RDR+RDRERSYDYDRRTHY+DRESRRDFERSSRDGG
Sbjct: 361 RDREKYRDRERDRDREREKARDRERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDGG 420

Query: 421 SRYYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVS 460
           +R+YRRSRSRSRSRSR RSLQT   HHERE SPARGGTTEK S+ISSNLAKLKDIYGDVS
Sbjct: 421 TRHYRRSRSRSRSRSRGRSLQT---HHEREQSPARGGTTEKASVISSNLAKLKDIYGDVS 480

[Close]

BLAST of CcUC01G009070 vs. TAIR 10
Match: AT5G37370.1 (PRP38 family protein )

HSP 1 Score: 462.6 bits (1189), Expect = 3.7e-130
Identity = 288/461 (62.47%), Postives = 331/461 (71.80%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRYV 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRAV                GFLYLRYV
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAV----------------GFLYLRYV 122

Query: 122 ADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQV 181
           AD KTLW W+EPY+KD+EEFSPGS+GRMTTMGVYVRDLLLG YYFDTLFPRIPVPV+RQ+
Sbjct: 123 ADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQI 182

Query: 182 VSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVR 241
           VSNLEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVR
Sbjct: 183 VSNLEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVR 242

Query: 242 RTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRDRDRGR 301
           R  PP+  DR+  D+V++  S RRSQSR++        DRD DR+R R+R+ DR+R+RGR
Sbjct: 243 RP-PPTGYDRNGGDEVQQR-SPRRSQSRDY------YSDRDSDRQREREREKDRERERGR 302

Query: 302 DRDRDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYDRRTHYTDRESRRD 361
           DR            YR+RERD   DR   R              DYD R+       R D
Sbjct: 303 DR------------YRERERDYGNDRRSRR--------------DYDSRSR------RND 362

Query: 362 FERSSRDGGSRYYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTS--IISSNL 421
           +E    D  SR+ RRSRSRSRSRSRS  +       EREP+P R  + ++ S   ++SNL
Sbjct: 363 YE----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSAVTVNSNL 393

Query: 422 AKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG-SWK 460
           AKLKD+YGD S QK D       R+DSS EEVI+LGG SW+
Sbjct: 423 AKLKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 393

[Close]

BLAST of CcUC01G009070 vs. TAIR 10
Match: AT5G37370.2 (PRP38 family protein )

HSP 1 Score: 443.0 bits (1138), Expect = 3.0e-124
Identity = 281/461 (60.95%), Postives = 324/461 (70.28%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRYV 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRAV                GFLYLRYV
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAV----------------GFLYLRYV 122

Query: 122 ADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQV 181
           AD KTLW W+EPY+KD+EEFSPGS+GRMTTMGVY        YYFDTLFPRIPVPV+RQ+
Sbjct: 123 ADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVY--------YYFDTLFPRIPVPVMRQI 182

Query: 182 VSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVR 241
           VSNLEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVR
Sbjct: 183 VSNLEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVR 242

Query: 242 RTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRDRDRGR 301
           R  PP+  DR+  D+V++  S RRSQSR++        DRD DR+R R+R+ DR+R+RGR
Sbjct: 243 RP-PPTGYDRNGGDEVQQR-SPRRSQSRDY------YSDRDSDRQREREREKDRERERGR 302

Query: 302 DRDRDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYDRRTHYTDRESRRD 361
           DR            YR+RERD   DR   R              DYD R+       R D
Sbjct: 303 DR------------YRERERDYGNDRRSRR--------------DYDSRSR------RND 362

Query: 362 FERSSRDGGSRYYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTS--IISSNL 421
           +E    D  SR+ RRSRSRSRSRSRS  +       EREP+P R  + ++ S   ++SNL
Sbjct: 363 YE----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSAVTVNSNL 385

Query: 422 AKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG-SWK 460
           AKLKD+YGD S QK D       R+DSS EEVI+LGG SW+
Sbjct: 423 AKLKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 385

[Close]

BLAST of CcUC01G009070 vs. TAIR 10
Match: AT5G37370.4 (PRP38 family protein )

HSP 1 Score: 375.9 bits (964), Expect = 4.5e-104
Identity = 246/408 (60.29%), Postives = 283/408 (69.36%), Query Frame = 0


Query: 55  MTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIG 114
           M GNCRGPSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRAV                G
Sbjct: 1   MGGNCRGPSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAV----------------G 60

Query: 115 FLYLRYVADPKTLWNWFEPYVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIP 174
           FLYLRYVAD KTLW W+EPY+KD+EEFSPGS+GRMTTMGVYVRDLLLG YYFDTLFPRIP
Sbjct: 61  FLYLRYVADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIP 120

Query: 175 VPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAST 234
           VPV+RQ+VSNLEK+ LP+K SG TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRAST
Sbjct: 121 VPVMRQIVSNLEKMNLPTKPSGSTGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRAST 180

Query: 235 RDSSPVRRTLPPSVNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHD 294
           R SSPVRR  PP+  DR+  D+V++  S RRSQSR++        DRD DR+R R+R+ D
Sbjct: 181 RGSSPVRRP-PPTGYDRNGGDEVQQR-SPRRSQSRDY------YSDRDSDRQREREREKD 240

Query: 295 RDRDRGRDRDRDREHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYDRRTHYT 354
           R+R+RGRDR            YR+RERD   DR   R              DYD R+   
Sbjct: 241 RERERGRDR------------YRERERDYGNDRRSRR--------------DYDSRSR-- 300

Query: 355 DRESRRDFERSSRDGGSRYYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTS- 414
               R D+E    D  SR+ RRSRSRSRSRSRS  +       EREP+P R  + ++ S 
Sbjct: 301 ----RNDYE----DDRSRHDRRSRSRSRSRSRSVQI-------EREPTPKRDSSNKEKSA 338

Query: 415 -IISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG-SWK 460
             ++SNLAKLKD+YGD S QK D       R+DSS EEVI+LGG SW+
Sbjct: 361 VTVNSNLAKLKDLYGDASSQKRDEGFG--TRKDSSSEEVIKLGGSSWR 338

[Close]

BLAST of CcUC01G009070 vs. TAIR 10
Match: AT5G37370.3 (PRP38 family protein )

HSP 1 Score: 176.4 bits (446), Expect = 5.2e-44
Identity = 81/96 (84.38%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 2  EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
          EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3  EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62 PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAV 98
          PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA+
Sbjct: 63 PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAI 98

[Close]

BLAST of CcUC01G009070 vs. TAIR 10
Match: AT2G40650.1 (PRP38 family protein )

HSP 1 Score: 68.2 bits (165), Expect = 2.0e-11
Identity = 99/361 (27.42%), Postives = 157/361 (43.49%), Query Frame = 0


Query: 12  SLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFCLLYK 71
           +L+EK++   I    ++KE     T   +VD+   ++DH+     G  R P+   CL+ K
Sbjct: 19  NLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAM-ELDHLGGTF-GGSRKPTPFLCLILK 78

Query: 72  FFTMKLTVKQMHGLLKHEDSPYIRAVGGILLTFNNHVYSKDIGFLYLRYVADPKTLWNWF 131
              ++   + +   +K++D  Y+R +G                  YLR       ++ + 
Sbjct: 79  MLQIQPEKEIVVEFIKNDDYKYVRILGA----------------FYLRLTGTDVDVYRYL 138

Query: 132 EP----YVKDEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEK 191
           EP    Y K  ++ S G    +T +   + +LL   Y  D   PR+             K
Sbjct: 139 EPLYNDYRKVRQKLSDGKFS-LTHVDEVIEELLTKDYSCDIAMPRL-------------K 198

Query: 192 LKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPS 251
            +   + +G+  E  +   ED        + +  ++ G                      
Sbjct: 199 KRWTLEQNGLL-EPRKSVLEDDFEEEEEKEENEGIADG---------------------- 258

Query: 252 VNDRDISDDVRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRDRDRGRDRDRDR 311
               D  D  R+SP   R + R+      R RDRDYDR+   DRDHDRD +R R   RDR
Sbjct: 259 --SEDEMDQRRKSPERERERDRDRRRDSHRHRDRDYDRDYDMDRDHDRDYERERGHGRDR 318

Query: 312 EHDRDREKYRDRERDRDRDRERERARDRDRDRDRERSYDYDRRTHYTDRESRRDFERSSR 369
           + +RDR+ YR+R+RDR+R R+RER R RDR R R RS   DR+ H TD    R+  +  +
Sbjct: 319 DRERDRDHYRERDRDRERGRDRERDR-RDRARRRSRSRSRDRKRHETDDVRDREEPKKKK 321

The following BLAST results are available for this feature:

BLAST of CcUC01G009070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875168.1	7.0e-224	91.04	pre-mRNA splicing factor SR-like 1 isoform X1 [Benincasa hispida] >XP_038875169....	[more]
XP_011655154.1	7.4e-218	90.41	pre-mRNA splicing factor SR-like 1 isoform X1 [Cucumis sativus] >XP_011655155.1 ...	[more]
XP_022993767.1	7.7e-215	87.97	pre-mRNA splicing factor SR-like 1 [Cucurbita maxima]	[more]
KAG7016573.1	2.2e-214	86.88	Pre-mRNA splicing factor SR-like 1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
TYK18924.1	2.5e-213	85.07	pre-mRNA-splicing factor 38B [Cucumis melo var. makuwa]	[more]

BLAST of CcUC01G009070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWB1	5.1e-129	62.47	Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 ...	[more]
Q5VTL8	7.6e-48	38.00	Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1	[more]
Q80SY5	2.9e-47	38.27	Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1	[more]
Q6AXY7	2.9e-47	38.97	Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1	[more]
Q6P7Y3	2.1e-42	36.35	Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1	[more]

BLAST of CcUC01G009070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTS5	3.7e-215	87.97	Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111489677 PE=3 SV=...	[more]
A0A5D3D5T6	1.2e-213	85.07	Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1FF63	2.7e-213	86.22	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111444923 PE=3 S...	[more]
A0A5A7TWJ6	1.7e-212	83.37	Pre-mRNA-splicing factor 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3CIJ0	2.5e-211	81.73	Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103501359 PE=3 SV=1	[more]

BLAST of CcUC01G009070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37370.1	3.7e-130	62.47	PRP38 family protein	[more]
AT5G37370.2	3.0e-124	60.95	PRP38 family protein	[more]
AT5G37370.4	4.5e-104	60.29	PRP38 family protein	[more]
AT5G37370.3	5.2e-44	84.38	PRP38 family protein	[more]
AT2G40650.1	2.0e-11	27.42	PRP38 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 101..177 e-value: 1.2E-15 score: 57.9 coord: 12..98 e-value: 4.0E-29 score: 101.7
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 101..342 coord: 1..104
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 311..457
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..405
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..375
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 426..450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..244
None	No IPR available	PANTHER	PTHR23142:SF3	PRP38 FAMILY PROTEIN	coord: 311..457 coord: 101..342 coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G009070.1	CcUC01G009070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome