CcUC01G008770 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G008770
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	psbQ-like protein 3, chloroplastic
Location	CicolChr01: 9456100 .. 9456735 (-)
RNA-Seq Expression	CcUC01G008770
Synteny	CcUC01G008770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCAATTAATCCCAATCTTAGCCTCAAACCTCAATAATCGCATCCATTTCTCTTCCTCTCTTCCCACAATCGCCTCCCCATGGTTCAAGACCACACCGAATCCTTCTAATAACGCCACAAACATAAGCAGAAGACTGGGGCTGGGATTCGTAGCTTTAATGGCGTCGTCAGTGACCGCGAAACCGGTGGAAGTAGCGAATGCTTTGGATCTGAAATTGATCGCGCCGGAGCAAAGCTTGGACGAGGCTGAGAGCGGAATCAGAAGCCACGCGAGGGCGCTTTTGCAGGTGAGACGCTTAATCGAATCGGAGGCATGGAAGGAAGCTCAGAAGCGATTGAGAAGCAGTTCGCCGCTGCTGAAACAGGATGTGTACACTATAATTGAATACAAACCGCCTGCGGAGAGGCCTGCTCTCAGGAAACTCTATTCTCTTCTCTTCAACAATGTTACGCGAGTAAGTGTGATTGTTTGAAGGTCTTGAACGGATTCTTATCTTCTCTGATTGAAGTGTATTTTTCTTTTTGGTGATTTCCAGATGGATTATGCGGCAAGAGATAAAGATGTAGAAGGAGTTTGGGAGTGTTACAATAAGATTGAGATGGCCATCTCTGATATTTTGTCAAGAATTTAG

mRNA sequence

ATGGCGCAATTAATCCCAATCTTAGCCTCAAACCTCAATAATCGCATCCATTTCTCTTCCTCTCTTCCCACAATCGCCTCCCCATGGTTCAAGACCACACCGAATCCTTCTAATAACGCCACAAACATAAGCAGAAGACTGGGGCTGGGATTCGTAGCTTTAATGGCGTCGTCAGTGACCGCGAAACCGGTGGAAGTAGCGAATGCTTTGGATCTGAAATTGATCGCGCCGGAGCAAAGCTTGGACGAGGCTGAGAGCGGAATCAGAAGCCACGCGAGGGCGCTTTTGCAGGTGAGACGCTTAATCGAATCGGAGGCATGGAAGGAAGCTCAGAAGCGATTGAGAAGCAGTTCGCCGCTGCTGAAACAGGATGTGTACACTATAATTGAATACAAACCGCCTGCGGAGAGGCCTGCTCTCAGGAAACTCTATTCTCTTCTCTTCAACAATGTTACGCGAATGGATTATGCGGCAAGAGATAAAGATGTAGAAGGAGTTTGGGAGTGTTACAATAAGATTGAGATGGCCATCTCTGATATTTTGTCAAGAATTTAG

Coding sequence (CDS)

ATGGCGCAATTAATCCCAATCTTAGCCTCAAACCTCAATAATCGCATCCATTTCTCTTCCTCTCTTCCCACAATCGCCTCCCCATGGTTCAAGACCACACCGAATCCTTCTAATAACGCCACAAACATAAGCAGAAGACTGGGGCTGGGATTCGTAGCTTTAATGGCGTCGTCAGTGACCGCGAAACCGGTGGAAGTAGCGAATGCTTTGGATCTGAAATTGATCGCGCCGGAGCAAAGCTTGGACGAGGCTGAGAGCGGAATCAGAAGCCACGCGAGGGCGCTTTTGCAGGTGAGACGCTTAATCGAATCGGAGGCATGGAAGGAAGCTCAGAAGCGATTGAGAAGCAGTTCGCCGCTGCTGAAACAGGATGTGTACACTATAATTGAATACAAACCGCCTGCGGAGAGGCCTGCTCTCAGGAAACTCTATTCTCTTCTCTTCAACAATGTTACGCGAATGGATTATGCGGCAAGAGATAAAGATGTAGAAGGAGTTTGGGAGTGTTACAATAAGATTGAGATGGCCATCTCTGATATTTTGTCAAGAATTTAG

Protein sequence

MAQLIPILASNLNNRIHFSSSLPTIASPWFKTTPNPSNNATNISRRLGLGFVALMASSVTAKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPLLKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDILSRI

Homology

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BLAST of CcUC01G008770 vs. NCBI nr
Match: XP_038877067.1 (psbQ-like protein 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 301.6 bits (771), Expect = 4.6e-78
Identity = 158/184 (85.87%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 1   MAQLIPILASNLNNRIHFSSSLPTIASPWFKTTPNPSNNATNISRRLGLGFVALMASSVT 60
           MA+L+PI  SNL NRI FSS  PTI+   F TTPN S NATNISRRLGLGF+ALMASSVT
Sbjct: 1   MAELLPISVSNLTNRIPFSSFRPTISFQSFNTTPNCSINATNISRRLGLGFIALMASSVT 60

Query: 61  AKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPL 120
           A PVE+ANALDLKLIAPEQSLDEAESGIRSHA ALLQVR LIESEAWKEAQKRLRSSSPL
Sbjct: 61  ATPVELANALDLKLIAPEQSLDEAESGIRSHAEALLQVRSLIESEAWKEAQKRLRSSSPL 120

Query: 121 LKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDI 180
           LKQD+YTIIEYKPPAERPALRKLYS+LFNNVTRMDYAARDKDVEGVW+CYN I +AISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSVLFNNVTRMDYAARDKDVEGVWKCYNNIAIAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of CcUC01G008770 vs. NCBI nr
Match: XP_004148913.1 (psbQ-like protein 3, chloroplastic [Cucumis sativus] >KGN50891.1 hypothetical protein Csa_023092 [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 3.0e-77
Identity = 159/184 (86.41%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MAQLIPILASNLNNRIHFSSSLPTIASPWFKTTPNPSNNATNISRRLGLGFVALMASSVT 60
           MA+LIPI  SNL NRIHFS S  TI+ P F TTPN SNNATNISRRLGLGF+ALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSYSPLTISFPSFNTTPNCSNNATNISRRLGLGFIALMASSVT 60

Query: 61  AKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPL 120
           A P EVANALDLKLIAPEQSLDEAESGIR HA ALLQVR LIESEAWKEAQKRLRS+S L
Sbjct: 61  AIPAEVANALDLKLIAPEQSLDEAESGIRRHAEALLQVRSLIESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDI 180
           LKQD+YTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDV GVWE Y K+EMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVGGVWESYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of CcUC01G008770 vs. NCBI nr
Match: XP_008463126.1 (PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis melo] >KAA0066219.1 psbQ-like protein 3 [Cucumis melo var. makuwa] >TYK08644.1 psbQ-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 285.8 bits (730), Expect = 2.6e-73
Identity = 153/184 (83.15%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 1   MAQLIPILASNLNNRIHFSSSLPTIASPWFKTTPNPSNNATNISRRLGLGFVALMASSVT 60
           MA+LIPI  SNL NRIHFSSS  TI+   F TTPN S NA NISRRLGLGF+ALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60

Query: 61  AKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPL 120
           A P EVANAL+LKLIAPEQSLDEAE GIR HA ALLQVR L+ESEAWKEAQKRLRS+S L
Sbjct: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDI 180
           LKQD+YTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKD  GV ECY K+EMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of CcUC01G008770 vs. NCBI nr
Match: XP_022991100.1 (psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 3.7e-67
Identity = 140/185 (75.68%), Postives = 156/185 (84.32%), Query Frame = 0


Query: 1   MAQLIPILASNLNNRIHFSSSLPTIASPWFKTTPNPSNNATNISRRLGLGFVALMA-SSV 60
           MA+L PI  SNL+NRIHFSSS P I+   F  T    +N  +ISRRLGLGF+ALMA SSV
Sbjct: 1   MAELSPISVSNLSNRIHFSSSPPIISFQLFSITAKRCSNCRSISRRLGLGFMALMASSSV 60

Query: 61  TAKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSP 120
            + PV++ NALDLKLIAPEQS +EAESGIR HA A+LQVR LIESE+WKEAQK+LRSSSP
Sbjct: 61  ASTPVKITNALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRSSSP 120

Query: 121 LLKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISD 180
           LLKQD+YTIIEYKPPAERP LRKLYSLLFNNVTRMDYAARDKD E VW+CY+ I MAISD
Sbjct: 121 LLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVWQCYDNIVMAISD 180

Query: 181 ILSRI 185
           ILSRI
Sbjct: 181 ILSRI 185

[Close]

BLAST of CcUC01G008770 vs. NCBI nr
Match: KAG7032694.1 (PsbQ-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 259.2 bits (661), Expect = 2.6e-65
Identity = 140/186 (75.27%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MAQLIPILASNLNNRIHFSSSLPTI-ASPWFKTTPNPSNNATNISRRLGLGFVALMA-SS 60
           MA+L PI  SNL+NRIHFSSS P I +S  F  T    +N  +ISRRLGLG +ALMA SS
Sbjct: 1   MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSS 60

Query: 61  VTAKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSS 120
           V + PV +ANALDLKLIAPEQS +EAESGIR HA A+LQVR LIESE+WKEAQK+LR+SS
Sbjct: 61  VASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRTSS 120

Query: 121 PLLKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAIS 180
           PLLKQD+YTIIEYKPPAERP LRKLYSLLFNNVTRMDYAARDKD E V +CY+ IEMAIS
Sbjct: 121 PLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIEMAIS 180

Query: 181 DILSRI 185
           DILSRI
Sbjct: 181 DILSRI 186

[Close]

BLAST of CcUC01G008770 vs. ExPASy Swiss-Prot
Match: Q2V4B2 (PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PQL3 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.6e-20
Identity = 50/109 (45.87%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 77  PEQSLDEAESGIRSHARALLQVRR-LIESEAWKEAQKRLRSSSPLLKQDVYTIIEYKPPA 136
           PE++++ A+ G+R +A  + +++  +IE + WKE  K LR S+  +KQD Y II+ KPP 
Sbjct: 79  PERTVELAQEGLRKNAENIKRIKEIMIEKKLWKEGGKELRRSASNMKQDFYLIIQAKPPK 138

Query: 137 ERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDILSRI 185
           +RP  R LYS LFN++T+MDYAARD D   V E Y  I   + DI  RI
Sbjct: 139 DRPLFRSLYSSLFNSITKMDYAARDGDETKVLEYYINIVAILDDIFPRI 187

[Close]

BLAST of CcUC01G008770 vs. ExPASy Swiss-Prot
Match: Q9XFT3 (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-09
Identity = 32/102 (31.37%), Postives = 60/102 (58.82%), Query Frame = 0


Query: 83  EAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPLLKQDVYTIIEYKPPAERPALRK 142
           EA +  +  A+ ++ V+ LI+ +AW   Q  LRS +  L+ D+ TII  KP  E+ +L+ 
Sbjct: 122 EAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKD 181

Query: 143 LYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDILSRI 185
           L + LF+ +  +DYAA+ K      + Y +   A++++L+++
Sbjct: 182 LTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]

BLAST of CcUC01G008770 vs. ExPASy Swiss-Prot
Match: Q41932 (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 6.2e-09
Identity = 29/102 (28.43%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 83  EAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPLLKQDVYTIIEYKPPAERPALRK 142
           EA +  +  A+ ++ V+  I+ +AW   Q  LR  +  L+ D+ T+I  KP  E+ +L+ 
Sbjct: 128 EAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKD 187

Query: 143 LYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDILSRI 185
           L + LF  +  +DYAAR K      + Y++   +++++L+++
Sbjct: 188 LTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKL 229

[Close]

BLAST of CcUC01G008770 vs. ExPASy Swiss-Prot
Match: Q41048 (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays OX=4577 GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.9e-08
Identity = 28/102 (27.45%), Postives = 60/102 (58.82%), Query Frame = 0


Query: 83  EAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPLLKQDVYTIIEYKPPAERPALRK 142
           EA + +++ A+ ++ ++ LI+ +AW   Q  LR  +  L+ D+ T+I  KP  E+ +L++
Sbjct: 115 EAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKE 174

Query: 143 LYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDILSRI 185
           L   LF+ +  +D+AA+ K      + +   + A+ D+L+++
Sbjct: 175 LTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKL 216

[Close]

BLAST of CcUC01G008770 vs. ExPASy Swiss-Prot
Match: Q41806 (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays OX=4577 GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.0e-08
Identity = 28/102 (27.45%), Postives = 60/102 (58.82%), Query Frame = 0


Query: 83  EAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPLLKQDVYTIIEYKPPAERPALRK 142
           EA + +++ A+ ++ ++ LI+ +AW   Q  LR  +  L+ D+ T+I  KP  E+ +L++
Sbjct: 111 EAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKE 170

Query: 143 LYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDILSRI 185
           L   LF+ +  +D+AA+ K      + +   + A+ D+L+++
Sbjct: 171 LTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLAKL 212

[Close]

BLAST of CcUC01G008770 vs. ExPASy TrEMBL
Match: A0A0A0KT23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315360 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.5e-77
Identity = 159/184 (86.41%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MAQLIPILASNLNNRIHFSSSLPTIASPWFKTTPNPSNNATNISRRLGLGFVALMASSVT 60
           MA+LIPI  SNL NRIHFS S  TI+ P F TTPN SNNATNISRRLGLGF+ALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSYSPLTISFPSFNTTPNCSNNATNISRRLGLGFIALMASSVT 60

Query: 61  AKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPL 120
           A P EVANALDLKLIAPEQSLDEAESGIR HA ALLQVR LIESEAWKEAQKRLRS+S L
Sbjct: 61  AIPAEVANALDLKLIAPEQSLDEAESGIRRHAEALLQVRSLIESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDI 180
           LKQD+YTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDV GVWE Y K+EMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVGGVWESYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of CcUC01G008770 vs. ExPASy TrEMBL
Match: A0A5A7VLN5 (PsbQ-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold871G00050 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.3e-73
Identity = 153/184 (83.15%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 1   MAQLIPILASNLNNRIHFSSSLPTIASPWFKTTPNPSNNATNISRRLGLGFVALMASSVT 60
           MA+LIPI  SNL NRIHFSSS  TI+   F TTPN S NA NISRRLGLGF+ALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60

Query: 61  AKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPL 120
           A P EVANAL+LKLIAPEQSLDEAE GIR HA ALLQVR L+ESEAWKEAQKRLRS+S L
Sbjct: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDI 180
           LKQD+YTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKD  GV ECY K+EMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of CcUC01G008770 vs. ExPASy TrEMBL
Match: A0A1S3CIJ1 (psbQ-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501351 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.3e-73
Identity = 153/184 (83.15%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 1   MAQLIPILASNLNNRIHFSSSLPTIASPWFKTTPNPSNNATNISRRLGLGFVALMASSVT 60
           MA+LIPI  SNL NRIHFSSS  TI+   F TTPN S NA NISRRLGLGF+ALMASSVT
Sbjct: 1   MAKLIPISLSNLTNRIHFSSSPLTISFQSFNTTPNCSKNAKNISRRLGLGFIALMASSVT 60

Query: 61  AKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPL 120
           A P EVANAL+LKLIAPEQSLDEAE GIR HA ALLQVR L+ESEAWKEAQKRLRS+S L
Sbjct: 61  AIPAEVANALNLKLIAPEQSLDEAERGIRGHAEALLQVRSLMESEAWKEAQKRLRSTSAL 120

Query: 121 LKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDI 180
           LKQD+YTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKD  GV ECY K+EMAISDI
Sbjct: 121 LKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDAGGVRECYKKMEMAISDI 180

Query: 181 LSRI 185
           LSRI
Sbjct: 181 LSRI 184

[Close]

BLAST of CcUC01G008770 vs. ExPASy TrEMBL
Match: A0A6J1JRX6 (psbQ-like protein 3, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487796 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.8e-67
Identity = 140/185 (75.68%), Postives = 156/185 (84.32%), Query Frame = 0


Query: 1   MAQLIPILASNLNNRIHFSSSLPTIASPWFKTTPNPSNNATNISRRLGLGFVALMA-SSV 60
           MA+L PI  SNL+NRIHFSSS P I+   F  T    +N  +ISRRLGLGF+ALMA SSV
Sbjct: 1   MAELSPISVSNLSNRIHFSSSPPIISFQLFSITAKRCSNCRSISRRLGLGFMALMASSSV 60

Query: 61  TAKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSP 120
            + PV++ NALDLKLIAPEQS +EAESGIR HA A+LQVR LIESE+WKEAQK+LRSSSP
Sbjct: 61  ASTPVKITNALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRSSSP 120

Query: 121 LLKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISD 180
           LLKQD+YTIIEYKPPAERP LRKLYSLLFNNVTRMDYAARDKD E VW+CY+ I MAISD
Sbjct: 121 LLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVWQCYDNIVMAISD 180

Query: 181 ILSRI 185
           ILSRI
Sbjct: 181 ILSRI 185

[Close]

BLAST of CcUC01G008770 vs. ExPASy TrEMBL
Match: A0A6J1HES6 (psbQ-like protein 3, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462819 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.3e-65
Identity = 139/186 (74.73%), Postives = 155/186 (83.33%), Query Frame = 0


Query: 1   MAQLIPILASNLNNRIHFSSSLPTI-ASPWFKTTPNPSNNATNISRRLGLGFVALMA-SS 60
           MA+L PI  SNL+NRIHFSSS P I +S  F  T    +N  +ISRRLGLG +ALMA SS
Sbjct: 1   MAELSPISVSNLSNRIHFSSSSPPINSSQLFSITAKRCSNCRSISRRLGLGLIALMASSS 60

Query: 61  VTAKPVEVANALDLKLIAPEQSLDEAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSS 120
           V + PV +ANALDLKLIAPEQS +EAESGIR HA A+LQVR LIESE+WKEAQK+LR+SS
Sbjct: 61  VASTPVRIANALDLKLIAPEQSFEEAESGIRGHAEAVLQVRGLIESESWKEAQKQLRTSS 120

Query: 121 PLLKQDVYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAIS 180
           PLLKQD+YTIIEYKPPAERP LRKLYSLLFNNVTRMDYAARDKD E V +CY+ I MAIS
Sbjct: 121 PLLKQDLYTIIEYKPPAERPPLRKLYSLLFNNVTRMDYAARDKDAERVRQCYDNIVMAIS 180

Query: 181 DILSRI 185
           DILSRI
Sbjct: 181 DILSRI 186

[Close]

BLAST of CcUC01G008770 vs. TAIR 10
Match: AT2G01918.1 (PsbQ-like 3 )

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-21
Identity = 50/109 (45.87%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 77  PEQSLDEAESGIRSHARALLQVRR-LIESEAWKEAQKRLRSSSPLLKQDVYTIIEYKPPA 136
           PE++++ A+ G+R +A  + +++  +IE + WKE  K LR S+  +KQD Y II+ KPP 
Sbjct: 79  PERTVELAQEGLRKNAENIKRIKEIMIEKKLWKEGGKELRRSASNMKQDFYLIIQAKPPK 138

Query: 137 ERPALRKLYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDILSRI 185
           +RP  R LYS LFN++T+MDYAARD D   V E Y  I   + DI  RI
Sbjct: 139 DRPLFRSLYSSLFNSITKMDYAARDGDETKVLEYYINIVAILDDIFPRI 187

[Close]

BLAST of CcUC01G008770 vs. TAIR 10
Match: AT4G21280.1 (photosystem II subunit QA )

HSP 1 Score: 64.7 bits (156), Expect = 8.9e-11
Identity = 32/102 (31.37%), Postives = 60/102 (58.82%), Query Frame = 0


Query: 83  EAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPLLKQDVYTIIEYKPPAERPALRK 142
           EA +  +  A+ ++ V+ LI+ +AW   Q  LRS +  L+ D+ TII  KP  E+ +L+ 
Sbjct: 121 EAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKD 180

Query: 143 LYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDILSRI 185
           L + LF+ +  +DYAA+ K      + Y +   A++++L+++
Sbjct: 181 LTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 222

[Close]

BLAST of CcUC01G008770 vs. TAIR 10
Match: AT4G21280.2 (photosystem II subunit QA )

HSP 1 Score: 64.7 bits (156), Expect = 8.9e-11
Identity = 32/102 (31.37%), Postives = 60/102 (58.82%), Query Frame = 0


Query: 83  EAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPLLKQDVYTIIEYKPPAERPALRK 142
           EA +  +  A+ ++ V+ LI+ +AW   Q  LRS +  L+ D+ TII  KP  E+ +L+ 
Sbjct: 122 EAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKD 181

Query: 143 LYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDILSRI 185
           L + LF+ +  +DYAA+ K      + Y +   A++++L+++
Sbjct: 182 LTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]

BLAST of CcUC01G008770 vs. TAIR 10
Match: AT4G05180.1 (photosystem II subunit Q-2 )

HSP 1 Score: 62.4 bits (150), Expect = 4.4e-10
Identity = 29/102 (28.43%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 83  EAESGIRSHARALLQVRRLIESEAWKEAQKRLRSSSPLLKQDVYTIIEYKPPAERPALRK 142
           EA +  +  A+ ++ V+  I+ +AW   Q  LR  +  L+ D+ T+I  KP  E+ +L+ 
Sbjct: 128 EAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKD 187

Query: 143 LYSLLFNNVTRMDYAARDKDVEGVWECYNKIEMAISDILSRI 185
           L + LF  +  +DYAAR K      + Y++   +++++L+++
Sbjct: 188 LTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKL 229

The following BLAST results are available for this feature:

BLAST of CcUC01G008770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877067.1	4.6e-78	85.87	psbQ-like protein 3, chloroplastic [Benincasa hispida]	[more]
XP_004148913.1	3.0e-77	86.41	psbQ-like protein 3, chloroplastic [Cucumis sativus] >KGN50891.1 hypothetical pr...	[more]
XP_008463126.1	2.6e-73	83.15	PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis melo] >KAA0066219.1 psbQ-...	[more]
XP_022991100.1	3.7e-67	75.68	psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima]	[more]
KAG7032694.1	2.6e-65	75.27	PsbQ-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC01G008770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V4B2	4.6e-20	45.87	PsbQ-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PQL3 PE=2 ...	[more]
Q9XFT3	1.3e-09	31.37	Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q41932	6.2e-09	28.43	Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q41048	6.9e-08	27.45	Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays OX=4577 GN=PSBQ1...	[more]
Q41806	9.0e-08	27.45	Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays OX=4577 GN=PSBQ2...	[more]

BLAST of CcUC01G008770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT23	1.5e-77	86.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315360 PE=3 SV=1	[more]
A0A5A7VLN5	1.3e-73	83.15	PsbQ-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold871G...	[more]
A0A1S3CIJ1	1.3e-73	83.15	psbQ-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501351 PE=3 ...	[more]
A0A6J1JRX6	1.8e-67	75.68	psbQ-like protein 3, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HES6	8.3e-65	74.73	psbQ-like protein 3, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CcUC01G008770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01918.1	3.3e-21	45.87	PsbQ-like 3	[more]
AT4G21280.1	8.9e-11	31.37	photosystem II subunit QA	[more]
AT4G21280.2	8.9e-11	31.37	photosystem II subunit QA	[more]
AT4G05180.1	4.4e-10	28.43	photosystem II subunit Q-2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008797	Oxygen-evolving enhancer protein 3	PFAM	PF05757	PsbQ	coord: 77..183 e-value: 1.3E-17 score: 64.2
IPR008797	Oxygen-evolving enhancer protein 3	PANTHER	PTHR33399	OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC	coord: 19..184
IPR023222	PsbQ-like domain superfamily	GENE3D	1.20.120.290		coord: 53..184 e-value: 1.7E-31 score: 111.2
IPR023222	PsbQ-like domain superfamily	SUPERFAMILY	101112	Oxygen-evolving enhancer protein 3,	coord: 77..184
None	No IPR available	PANTHER	PTHR33399:SF6	PSBQ-LIKE PROTEIN 3, CHLOROPLASTIC	coord: 19..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G008770.1	CcUC01G008770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity