CcUC01G008590 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G008590
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr01: 9206265 .. 9208280 (-)
RNA-Seq Expression	CcUC01G008590
Synteny	CcUC01G008590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGATTGAATACCGATATCTTCCCAAAATTTCTCCATATTTCTATTCTTCTTTATACCTCTTTACGGTGGTGCAACTTTGATCGGGGAATTCTTTCAATCCACATGGTTTCCAAGACTGTATCCTCCGCTCTTTCCCCACCTCCTTCCAAACCCAAGCTCTCGTCTTTGTTTCTGTTTACTCACCCACAAACAATTGCATCTTCAGATCCCCAAAATCCATCTCCTATTCCTTCCAAATCCCCGCATCTCCTCTCCAAACCCACTGTATCACCCCATATTTCCCCCAAAAAGTCAACTACAGGGCTCTCGTTTCAACAACGACATCGGACGTTCCTTCAAAATTACAAGACAGGTAATTTTACCGCTTCAGAAGCATTACAATTCTTTGACCTATCGATGAATGCATATCCTACCCCTGCCATGTCTTCCTTCAATCTTGTACTTAGTGGACTTGCTAAGATTAAGCACTACTTTGAGGTTTTTCAGCTGTATTATAGAATTAGCTTAGCCGGACTTCTGCCTAATCTCATCACGCTTAATGTTTTGGTTAATTGCCTTTGTAATGTGAATCGGGTTAGTGAAGGTCTTGCAGCCATGGCGGGGATTATAAGGAGAGGTTATACTCCTAATACAGTGACATATACGTCTTTGATTAAAGGCTTGTGTATGGAGCATAGGATTGGTGAAGCCACACGGTTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAGATGTGATTACTTATGGGACTTTAATCAGAGGTCTTTGTCAAACAGGTAATACTAACATTGCACTTAAGTTGCATGAAGAAATGCTCAATGGGACTGGTCGTTATGGCATTAATTGTAAGCCTAATGTTATTTGTTATAATACCATTATTGATGGGCTCTGTAAAGATGGACAGGAAGATAAGGCAATGGAACTTTTTGAGGAAATGAAAGCTCGGAGAATACTTCCAAATGTGGTTTCTTACACCTCTTTGATTCATGGATTTGGTCGTAGTGGAAAGTGGGAGGAGGCTAAATGTTTGCTCAATGAGATGATGGATCAAGGTGTTCAACCAAATGCAACTACATTTAATGTGTTGATGGATATGCTTTGCAAGGTAGGACAAGTTATCAACGCTAAGGAGTTGCTAGAGGTGATGATGATTCAGAGTGGCATTGTTCCTAGTTTGTTTAATTATAATACATTGTTGGATGGGTTCTGTTTGGTTGGTGATTTAAATAGTGCTAGGGAACTGTTTGATAGTTTGCCAAGTAAGGGATGTGAACCTAATTTGGTAAGCTACACTGTGCTAATCAATGGGTATTGCAAAAATGGGAAGGTGGAAGAAGCAATGAAGATTTACAATGAATTGCTTCAAATGGGTATCAAGCCATGTGTGATAACATATAATGCCCTGCTAACGGGTCTTTTTCAGTCGGGGAAGGTTGATGATGCAAAGAAAATATTTGGTGTCATTCAAGCTGATGGTCTAGTGCCAAGTTCAGATACGTTTAGTATCTTGTTAGATGGGTTGTGTAAGAATGATTGTTTGTTAGAAGCAATGGAAATTTTTAATGAGCTATCTTACGATTTAAAATTGAACATCGGTATCTTTAATTGTATTATTGATGGCTTATGTAAAGCAGGAAAAGTTGAAACTGCTTGGGAGCTTTTCAACAAATTGTCCCATAAAGGGCTTCTACCAAATGTTGTGACACATAACATTATGATCTACGGCTATTGTAAAGAAGGACAACTAGACAAGGCATATGATTTATTTCAAAAGATGGAAGAAAATGGTTGTACCCCTGATGTAATTACCTACAATACACTTCTACAAGGTTTCTACAAAAGTAATAAGCGAGAGGTAATGGTTGAGCTTCTTCATAAGATGGTTCAGAAAAATGTGTTGCCAAATACTTACACCTGTAGCATAGTTTTATACATGCTTGAAGATGAAAAGTATCGGGAATTTCTGAACTTGCTTCCAACATTTCCTACTCAAGAGTGTCAGGGTTGA

mRNA sequence

ATGGATGGATTGAATACCGATATCTTCCCAAAATTTCTCCATATTTCTATTCTTCTTTATACCTCTTTACGGTGGTGCAACTTTGATCGGGGAATTCTTTCAATCCACATGGTTTCCAAGACTGTATCCTCCGCTCTTTCCCCACCTCCTTCCAAACCCAAGCTCTCGTCTTTGTTTCTGTTTACTCACCCACAAACAATTGCATCTTCAGATCCCCAAAATCCATCTCCTATTCCTTCCAAATCCCCGCATCTCCTCTCCAAACCCACTGTATCACCCCATATTTCCCCCAAAAAGTCAACTACAGGGCTCTCGTTTCAACAACGACATCGGACGTTCCTTCAAAATTACAAGACAGGTAATTTTACCGCTTCAGAAGCATTACAATTCTTTGACCTATCGATGAATGCATATCCTACCCCTGCCATGTCTTCCTTCAATCTTGTACTTAGTGGACTTGCTAAGATTAAGCACTACTTTGAGGTTTTTCAGCTGTATTATAGAATTAGCTTAGCCGGACTTCTGCCTAATCTCATCACGCTTAATGTTTTGGTTAATTGCCTTTGTAATGTGAATCGGGTTAGTGAAGGTCTTGCAGCCATGGCGGGGATTATAAGGAGAGGTTATACTCCTAATACAGTGACATATACGTCTTTGATTAAAGGCTTGTGTATGGAGCATAGGATTGGTGAAGCCACACGGTTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAGATGTGATTACTTATGGGACTTTAATCAGAGGTCTTTGTCAAACAGGTAATACTAACATTGCACTTAAGTTGCATGAAGAAATGCTCAATGGGACTGGTCGTTATGGCATTAATTGTAAGCCTAATGTTATTTGTTATAATACCATTATTGATGGGCTCTGTAAAGATGGACAGGAAGATAAGGCAATGGAACTTTTTGAGGAAATGAAAGCTCGGAGAATACTTCCAAATGTGGTTTCTTACACCTCTTTGATTCATGGATTTGGTCGTAGTGGAAAGTGGGAGGAGGCTAAATGTTTGCTCAATGAGATGATGGATCAAGGTGTTCAACCAAATGCAACTACATTTAATGTGTTGATGGATATGCTTTGCAAGGTAGGACAAGTTATCAACGCTAAGGAGTTGCTAGAGGTGATGATGATTCAGAGTGGCATTGTTCCTAGTTTGTTTAATTATAATACATTGTTGGATGGGTTCTGTTTGGTTGGTGATTTAAATAGTGCTAGGGAACTGTTTGATAGTTTGCCAAGTAAGGGATGTGAACCTAATTTGGTAAGCTACACTGTGCTAATCAATGGGTATTGCAAAAATGGGAAGGTGGAAGAAGCAATGAAGATTTACAATGAATTGCTTCAAATGGGTATCAAGCCATGTGTGATAACATATAATGCCCTGCTAACGGGTCTTTTTCAGTCGGGGAAGGTTGATGATGCAAAGAAAATATTTGGTGTCATTCAAGCTGATGGTCTAGTGCCAAGTTCAGATACGTTTAGTATCTTGTTAGATGGGTTGTGTAAGAATGATTGTTTGTTAGAAGCAATGGAAATTTTTAATGAGCTATCTTACGATTTAAAATTGAACATCGGTATCTTTAATTGTATTATTGATGGCTTATGTAAAGCAGGAAAAGTTGAAACTGCTTGGGAGCTTTTCAACAAATTGTCCCATAAAGGGCTTCTACCAAATGTTGTGACACATAACATTATGATCTACGGCTATTGTAAAGAAGGACAACTAGACAAGGCATATGATTTATTTCAAAAGATGGAAGAAAATGGTTGTACCCCTGATGTAATTACCTACAATACACTTCTACAAGGTTTCTACAAAAGTAATAAGCGAGAGGTAATGGTTGAGCTTCTTCATAAGATGGTTCAGAAAAATGTGTTGCCAAATACTTACACCTGTAGCATAGTTTTATACATGCTTGAAGATGAAAAGTATCGGGAATTTCTGAACTTGCTTCCAACATTTCCTACTCAAGAGTGTCAGGGTTGA

Coding sequence (CDS)

ATGGATGGATTGAATACCGATATCTTCCCAAAATTTCTCCATATTTCTATTCTTCTTTATACCTCTTTACGGTGGTGCAACTTTGATCGGGGAATTCTTTCAATCCACATGGTTTCCAAGACTGTATCCTCCGCTCTTTCCCCACCTCCTTCCAAACCCAAGCTCTCGTCTTTGTTTCTGTTTACTCACCCACAAACAATTGCATCTTCAGATCCCCAAAATCCATCTCCTATTCCTTCCAAATCCCCGCATCTCCTCTCCAAACCCACTGTATCACCCCATATTTCCCCCAAAAAGTCAACTACAGGGCTCTCGTTTCAACAACGACATCGGACGTTCCTTCAAAATTACAAGACAGGTAATTTTACCGCTTCAGAAGCATTACAATTCTTTGACCTATCGATGAATGCATATCCTACCCCTGCCATGTCTTCCTTCAATCTTGTACTTAGTGGACTTGCTAAGATTAAGCACTACTTTGAGGTTTTTCAGCTGTATTATAGAATTAGCTTAGCCGGACTTCTGCCTAATCTCATCACGCTTAATGTTTTGGTTAATTGCCTTTGTAATGTGAATCGGGTTAGTGAAGGTCTTGCAGCCATGGCGGGGATTATAAGGAGAGGTTATACTCCTAATACAGTGACATATACGTCTTTGATTAAAGGCTTGTGTATGGAGCATAGGATTGGTGAAGCCACACGGTTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAGATGTGATTACTTATGGGACTTTAATCAGAGGTCTTTGTCAAACAGGTAATACTAACATTGCACTTAAGTTGCATGAAGAAATGCTCAATGGGACTGGTCGTTATGGCATTAATTGTAAGCCTAATGTTATTTGTTATAATACCATTATTGATGGGCTCTGTAAAGATGGACAGGAAGATAAGGCAATGGAACTTTTTGAGGAAATGAAAGCTCGGAGAATACTTCCAAATGTGGTTTCTTACACCTCTTTGATTCATGGATTTGGTCGTAGTGGAAAGTGGGAGGAGGCTAAATGTTTGCTCAATGAGATGATGGATCAAGGTGTTCAACCAAATGCAACTACATTTAATGTGTTGATGGATATGCTTTGCAAGGTAGGACAAGTTATCAACGCTAAGGAGTTGCTAGAGGTGATGATGATTCAGAGTGGCATTGTTCCTAGTTTGTTTAATTATAATACATTGTTGGATGGGTTCTGTTTGGTTGGTGATTTAAATAGTGCTAGGGAACTGTTTGATAGTTTGCCAAGTAAGGGATGTGAACCTAATTTGGTAAGCTACACTGTGCTAATCAATGGGTATTGCAAAAATGGGAAGGTGGAAGAAGCAATGAAGATTTACAATGAATTGCTTCAAATGGGTATCAAGCCATGTGTGATAACATATAATGCCCTGCTAACGGGTCTTTTTCAGTCGGGGAAGGTTGATGATGCAAAGAAAATATTTGGTGTCATTCAAGCTGATGGTCTAGTGCCAAGTTCAGATACGTTTAGTATCTTGTTAGATGGGTTGTGTAAGAATGATTGTTTGTTAGAAGCAATGGAAATTTTTAATGAGCTATCTTACGATTTAAAATTGAACATCGGTATCTTTAATTGTATTATTGATGGCTTATGTAAAGCAGGAAAAGTTGAAACTGCTTGGGAGCTTTTCAACAAATTGTCCCATAAAGGGCTTCTACCAAATGTTGTGACACATAACATTATGATCTACGGCTATTGTAAAGAAGGACAACTAGACAAGGCATATGATTTATTTCAAAAGATGGAAGAAAATGGTTGTACCCCTGATGTAATTACCTACAATACACTTCTACAAGGTTTCTACAAAAGTAATAAGCGAGAGGTAATGGTTGAGCTTCTTCATAAGATGGTTCAGAAAAATGTGTTGCCAAATACTTACACCTGTAGCATAGTTTTATACATGCTTGAAGATGAAAAGTATCGGGAATTTCTGAACTTGCTTCCAACATTTCCTACTCAAGAGTGTCAGGGTTGA

Protein sequence

MDGLNTDIFPKFLHISILLYTSLRWCNFDRGILSIHMVSKTVSSALSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPIPSKSPHLLSKPTVSPHISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLVLSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPNTYTCSIVLYMLEDEKYREFLNLLPTFPTQECQG

Homology

[Close]

BLAST of CcUC01G008590 vs. NCBI nr
Match: XP_038874245.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida] >XP_038874246.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida] >XP_038874247.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 1038.1 bits (2683), Expect = 3.3e-299
Identity = 519/643 (80.72%), Postives = 579/643 (90.05%), Query Frame = 0


Query: 37  MVSKTVSSA----LSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPIPSKSPHLLS---KP 96
           MVSKTV+SA    LSP PSK KLSS  LFTHPQ +ASS+PQNP PIP+KSP +LS   K 
Sbjct: 1   MVSKTVASAIFPSLSPAPSKGKLSS--LFTHPQRVASSNPQNPFPIPAKSPPVLSKLFKS 60

Query: 97  TVSPHISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLV 156
           TVSP ISP+KST+ +SFQ+R RTFL N KTGNFTASE LQFFDL M+A PTPAM+SFNL+
Sbjct: 61  TVSPEISPEKSTSEISFQERLRTFLHNCKTGNFTASEGLQFFDLMMSANPTPAMASFNLL 120

Query: 157 LSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGY 216
           L GLAKIKHY EVFQ+YYR+SLAGLLPN IT N+L+NCLCNVNRVSEGLAAMAGIIRRGY
Sbjct: 121 LGGLAKIKHYSEVFQVYYRMSLAGLLPNYITFNILLNCLCNVNRVSEGLAAMAGIIRRGY 180

Query: 217 TPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALK 276
           TPN VTYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLI+GLCQTGNTNIALK
Sbjct: 181 TPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALK 240

Query: 277 LHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTS 336
           LHEEMLNGTG YGINCKPNVICY+TIIDGLCKDGQEDKA +LFEEMKA+R+LP+VVSY+S
Sbjct: 241 LHEEMLNGTGHYGINCKPNVICYSTIIDGLCKDGQEDKARKLFEEMKAQRMLPDVVSYSS 300

Query: 337 LIHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQS 396
           LIHGF  SG+WEEAKCLLNEM+DQG+QPNA TFNVLM MLCKVGQVI AK+LLEV MIQ 
Sbjct: 301 LIHGFCHSGRWEEAKCLLNEMVDQGIQPNAVTFNVLMGMLCKVGQVIEAKKLLEV-MIQR 360

Query: 397 GIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEA 456
           G +P LF YNTL+DGFCLVGDL+SARELFDS+PSKGCEPN++SY VLINGYCKN KVEEA
Sbjct: 361 GNIPDLFTYNTLMDGFCLVGDLHSARELFDSIPSKGCEPNVISYNVLINGYCKNWKVEEA 420

Query: 457 MKIYNELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDG 516
           MKIYNE+LQMGIKP VITYNALL GLFQ+ KV+DAKKIFGVIQA GLVPSS TFSI LDG
Sbjct: 421 MKIYNEMLQMGIKPSVITYNALLMGLFQARKVNDAKKIFGVIQARGLVPSSCTFSIFLDG 480

Query: 517 LCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNV 576
           LCKNDCLLEAME +NELSY+LKLNI IFNC+I+GLCKA K+ETAWELF+K SH+GLLPNV
Sbjct: 481 LCKNDCLLEAMEFYNELSYNLKLNIDIFNCLINGLCKARKLETAWELFDKFSHEGLLPNV 540

Query: 577 VTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHK 636
           VT++I+I+G CKEGQL+KA DLF+KMEENGCTP+VITYNTLL GFY SNKRE ++ELLH+
Sbjct: 541 VTYSILIHGCCKEGQLEKANDLFRKMEENGCTPNVITYNTLLCGFYGSNKREEVIELLHR 600

Query: 637 MVQKNVLPNTYTCSIVLYML-EDEKYREFLNLLPTFPTQECQG 672
           MVQKNVLP+  TC+IV+ ML EDEK+R +LNLLPTFP QEC+G
Sbjct: 601 MVQKNVLPDASTCTIVVNMLSEDEKFRGYLNLLPTFPIQECRG 640

[Close]

BLAST of CcUC01G008590 vs. NCBI nr
Match: XP_023548637.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1009.2 bits (2608), Expect = 1.6e-290
Identity = 506/643 (78.69%), Postives = 569/643 (88.49%), Query Frame = 0


Query: 37  MVSKTV----SSALSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPIPSKSPHLLSKP--- 96
           MVSKTV    SS+LSP PSK KLSS  L T P  IASS+PQN SPIP++SP ++SKP   
Sbjct: 1   MVSKTVASAISSSLSPAPSKGKLSS--LVTRPLRIASSNPQNLSPIPAESPPIISKPPNS 60

Query: 97  TVSPHISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLV 156
            VSP +S +KSTT +SF +R RTFLQN KTGNFTASEA QFFDL M A PTPAMSSFNL+
Sbjct: 61  NVSPEVSLEKSTTEISFHERLRTFLQNCKTGNFTASEAFQFFDLMMLANPTPAMSSFNLL 120

Query: 157 LSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGY 216
           L GLAK KHY EV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRG+
Sbjct: 121 LGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGF 180

Query: 217 TPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALK 276
            PN VTYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLI+GLCQTGNTNIALK
Sbjct: 181 IPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALK 240

Query: 277 LHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTS 336
           LHEEMLNGTGRYGI+CKPNVICY+TIIDGLCKDG+EDKA ELFEEMKARR+LP+V+SY+S
Sbjct: 241 LHEEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSS 300

Query: 337 LIHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQS 396
           LIHGF   GKWEEAKCL NEM+D G+QPNA TFNVLMD+LCK G+VI A ELLEV MIQ 
Sbjct: 301 LIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEV-MIQR 360

Query: 397 GIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEA 456
           G  P LF YNTL+DGFCLV DL+SARELF S+PSKGCEPN++SY VLINGYCKN KVEEA
Sbjct: 361 GNAPDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEA 420

Query: 457 MKIYNELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDG 516
           MKIYNE+LQ+GIKP VITYNALLTGLFQ+GKVDDAKKIFGVIQA GLVPSS T SI +DG
Sbjct: 421 MKIYNEMLQVGIKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDG 480

Query: 517 LCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNV 576
           LCKNDCLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +GLLPNV
Sbjct: 481 LCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNV 540

Query: 577 VTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHK 636
           VT++I+I+GYCKEGQ++KA DLF+KMEENGCTP+VITYNTLL+GFYKSNKRE +VELLH+
Sbjct: 541 VTYSILIHGYCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHR 600

Query: 637 MVQKNVLPNTYTCSIVLYML-EDEKYREFLNLLPTFPTQECQG 672
           MV+KNV+P+  TC+IVL ML +DEKYR  LNLLPTFP QE +G
Sbjct: 601 MVKKNVVPDASTCTIVLDMLSKDEKYRGCLNLLPTFPVQEYRG 640

[Close]

BLAST of CcUC01G008590 vs. NCBI nr
Match: XP_022992036.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima])

HSP 1 Score: 1009.2 bits (2608), Expect = 1.6e-290
Identity = 505/643 (78.54%), Postives = 567/643 (88.18%), Query Frame = 0


Query: 37  MVSKTVSSALS----PPPSKPKLSSLFLFTHPQTIASSDPQNPSPIPSKSPHLLSKP--- 96
           MVSKTV+SA+S    P PSK KLSS  LFTHP  IASS PQNPSPI ++SP ++SKP   
Sbjct: 1   MVSKTVASAISSSLLPAPSKGKLSS--LFTHPTIIASSKPQNPSPISAESPPVISKPPNS 60

Query: 97  TVSPHISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLV 156
            VSP +S +KSTT +SF +R RTFLQN KTGNFT SEALQFFDL M A PTPAMSSFNL+
Sbjct: 61  NVSPEVSLEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLL 120

Query: 157 LSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGY 216
           L GLAK KHY EV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRGY
Sbjct: 121 LGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGY 180

Query: 217 TPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALK 276
            PN VTYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLI+GLCQTGNTNIALK
Sbjct: 181 VPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALK 240

Query: 277 LHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTS 336
           LHEEMLNGTGRYGI+CKPNVICY+TIIDGLCKDG+EDKA ELFEEMKARR+LP+V+SY+S
Sbjct: 241 LHEEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSS 300

Query: 337 LIHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQS 396
           LIHGF   GKWEEAKCL NEM+D G+QPNA TFNVLMD+LCK G+VI A +LLEV MIQ 
Sbjct: 301 LIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANKLLEV-MIQR 360

Query: 397 GIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEA 456
           G VP LF YNTL+DGFCLV DL SARELF S+PSKGCEPN++SY VLINGYCKN KVEEA
Sbjct: 361 GNVPDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEA 420

Query: 457 MKIYNELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDG 516
           MKIYNE+LQ+G+KP VITYNALLTGLFQ+GKVDDAKKIFGVIQA GLVPSS T SI +DG
Sbjct: 421 MKIYNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDG 480

Query: 517 LCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNV 576
           LCKNDCLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +G LPNV
Sbjct: 481 LCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNV 540

Query: 577 VTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHK 636
           VT++I+I+G CKEGQ++KA DLF+KMEENGCTP+VITYNTLL+GFYKSNKRE +VELLH+
Sbjct: 541 VTYSILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHR 600

Query: 637 MVQKNVLPNTYTCSIVLYML-EDEKYREFLNLLPTFPTQECQG 672
           MV KNV+P+  TC+IVL ML EDEKYR  LNLLPTFP Q+ +G
Sbjct: 601 MVNKNVVPDASTCTIVLDMLSEDEKYRGCLNLLPTFPVQDYRG 640

[Close]

BLAST of CcUC01G008590 vs. NCBI nr
Match: XP_022953742.1 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1004.2 bits (2595), Expect = 5.3e-289
Identity = 500/638 (78.37%), Postives = 566/638 (88.71%), Query Frame = 0


Query: 38  VSKTVSSALSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPIPSKSPHLLSKP---TVSPH 97
           V+  +SS+LSP PSK KLSS  LFT P  IASS+PQNPSPIP++SP ++SKP    VSP 
Sbjct: 6   VASAISSSLSPAPSKGKLSS--LFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNVSPE 65

Query: 98  ISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLVLSGLA 157
           +S +KSTT +SF  R RTFLQN KTGNFT SEALQFFDL M A PTPAMSSFNL+L GLA
Sbjct: 66  VSLEKSTTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLA 125

Query: 158 KIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTV 217
           K KHY EV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRG+ PN V
Sbjct: 126 KTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIV 185

Query: 218 TYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEM 277
           TYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLI+GLCQTGNTNIALKLHEEM
Sbjct: 186 TYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEM 245

Query: 278 LNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGF 337
           LNGTGRYGI+CKPNVI Y+TIIDGLCKDG+EDKA ELFEEMKARR+LP+V+SY+SLIHGF
Sbjct: 246 LNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGF 305

Query: 338 GRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPS 397
              GKWEEAKCL NEM+D G+QPNA TFNVLMD+LCK G+VI A ELLEV MIQ G VP 
Sbjct: 306 CNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEV-MIQRGNVPD 365

Query: 398 LFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYN 457
           LF YNTL+DGFCLV DL+SARELF S+PSKGCEPN++SY VLINGYCKN KVEEAMKIYN
Sbjct: 366 LFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYN 425

Query: 458 ELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKND 517
           E+LQ+GIKP +ITYNALLTGLFQ+GKV+DAKKIFGVIQA GLVPSS T SI +DGLCKND
Sbjct: 426 EMLQVGIKPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKND 485

Query: 518 CLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNI 577
           CLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +GLLPNVVT++I
Sbjct: 486 CLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSI 545

Query: 578 MIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKN 637
           +I+G CKEGQ++KA DLF+KMEENGCTP+VITYNTLL+GFYKSNKRE +VELLH+MV+KN
Sbjct: 546 LIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKN 605

Query: 638 VLPNTYTCSIVLYML-EDEKYREFLNLLPTFPTQECQG 672
           V+P+  TC+IVL ML +DEKYR  LNLLPTFP QE +G
Sbjct: 606 VVPDASTCTIVLDMLSKDEKYRGCLNLLPTFPVQEYRG 640

[Close]

BLAST of CcUC01G008590 vs. NCBI nr
Match: KAG7014482.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1002.7 bits (2591), Expect = 1.5e-288
Identity = 503/643 (78.23%), Postives = 567/643 (88.18%), Query Frame = 0


Query: 37  MVSKTV----SSALSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPIPSKSPHLLSKP--- 96
           MVSKTV    SS+LSP PSK KLSS  LFT P  IASS+PQNPSPIP++SP ++SKP   
Sbjct: 1   MVSKTVASAISSSLSPAPSKGKLSS--LFTRPPIIASSNPQNPSPIPAESPPIISKPPNS 60

Query: 97  TVSPHISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLV 156
            VSP +S +KSTT + F +R RTFLQN KTGNFT SEA QFFDL M A PTPAMSSFNL+
Sbjct: 61  NVSPEVSLEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLL 120

Query: 157 LSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGY 216
           L GLAK KHY EV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRG+
Sbjct: 121 LGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGF 180

Query: 217 TPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALK 276
            PN VTYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLI+GLCQTGNTNIALK
Sbjct: 181 IPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALK 240

Query: 277 LHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTS 336
           LHEEMLNGTGRYGI+CKPNVI Y+TIIDGLCKDG+EDKA ELFEEMKARR+LP+V+SY+S
Sbjct: 241 LHEEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSS 300

Query: 337 LIHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQS 396
           LIHGF   GKWEEAKCL NEM+D G+QPNA TFNVLMD+LCK G+VI A ELLEV MIQ 
Sbjct: 301 LIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEV-MIQR 360

Query: 397 GIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEA 456
           G VP LF YNTL+DGFCLV DL+SARELF S+PSKGCEPN++SY VLINGYCKN KVEEA
Sbjct: 361 GNVPDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEA 420

Query: 457 MKIYNELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDG 516
           MKIYNE+LQ+GIKP VITYNALLTGLFQ+GKV+DAKKIFGVIQA GLVPSS T SI +DG
Sbjct: 421 MKIYNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDG 480

Query: 517 LCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNV 576
           LCKNDCLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +GLLPNV
Sbjct: 481 LCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNV 540

Query: 577 VTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHK 636
           VT++I+I+G CKEGQ++KA DLF+KMEENGCTP+VITYNTLL+GFYKSNKRE +VELLH+
Sbjct: 541 VTYSILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHR 600

Query: 637 MVQKNVLPNTYTCSIVLYML-EDEKYREFLNLLPTFPTQECQG 672
           MV+KNV+P+  TC+IVL ML +DEKYR  LNLLP FP QE +G
Sbjct: 601 MVKKNVVPDASTCTIVLDMLSKDEKYRGCLNLLPMFPVQEYRG 640

[Close]

BLAST of CcUC01G008590 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 2.9e-112
Identity = 225/613 (36.70%), Postives = 352/613 (57.42%), Query Frame = 0


Query: 80  SKSPHLLSKPTVSPHISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYP 139
           S    +L K T   H S   +   LS+++R R  + + K      ++A+  F+  + + P
Sbjct: 13  SNFTQILEKGTSLLHYS-SITEAKLSYKERLRNGIVDIK-----VNDAIDLFESMIQSRP 72

Query: 140 TPAMSSFNLVLSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLA 199
            P    FN + S +A+ K Y  V      + L G+  ++ T+ +++NC C   ++    +
Sbjct: 73  LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 132

Query: 200 AMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLC 259
            +    + GY P+T+T+++L+ G C+E R+ EA  L  RM ++  RPD++T  TLI GLC
Sbjct: 133 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 192

Query: 260 QTGNTNIALKLHEEML--------------------NGTGRYGI---------NCKPNVI 319
             G  + AL L + M+                    +G     +         N K +V+
Sbjct: 193 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 252

Query: 320 CYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGKWEEAKCLLNEM 379
            Y+ +ID LCKDG  D A+ LF EM+ + I  +VV+Y+SLI G    GKW++   +L EM
Sbjct: 253 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 312

Query: 380 MDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGD 439
           + + + P+  TF+ L+D+  K G+++ AKEL    MI  GI P    YN+L+DGFC    
Sbjct: 313 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN-EMITRGIAPDTITYNSLIDGFCKENC 372

Query: 440 LNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQMGIKPCVITYNA 499
           L+ A ++FD + SKGCEP++V+Y++LIN YCK  +V++ M+++ E+   G+ P  ITYN 
Sbjct: 373 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 432

Query: 500 LLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEAMEIFNELSYD- 559
           L+ G  QSGK++ AK++F  + + G+ PS  T+ ILLDGLC N  L +A+EIF ++    
Sbjct: 433 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 492

Query: 560 LKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYGYCKEGQLDKAY 619
           + L IGI+N II G+C A KV+ AW LF  LS KG+ P+VVT+N+MI G CK+G L +A 
Sbjct: 493 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 552

Query: 620 DLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPNTYTCSIVLYML 662
            LF+KM+E+GCTPD  TYN L++     +     VEL+ +M       ++ T  +V+ ML
Sbjct: 553 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 612

[Close]

BLAST of CcUC01G008590 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.1e-109
Identity = 218/599 (36.39%), Postives = 346/599 (57.76%), Query Frame = 0


Query: 100 STTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLVLSGLAKIKHY 159
           S   LS+++R R+ L + K     A +A+  F   +++ P P +  F+ + S +AK K Y
Sbjct: 50  SDRNLSYRERLRSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 109

Query: 160 FEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSL 219
             V  L  ++ L G+  NL TL++++NC C   ++    +AM  II+ GY PNT+T+++L
Sbjct: 110 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 169

Query: 220 IKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEMLNGTG 279
           I GLC+E R+ EA  L  RM ++G +PD+IT  TL+ GLC +G    A+ L ++M+    
Sbjct: 170 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV---- 229

Query: 280 RYGINCKP---------NVIC--------------------------YNTIIDGLCKDGQ 339
            YG  C+P         NV+C                          Y+ IIDGLCK G 
Sbjct: 230 EYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 289

Query: 340 EDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNV 399
            D A  LF EM+ + I  N+++Y  LI GF  +G+W++   LL +M+ + + PN  TF+V
Sbjct: 290 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 349

Query: 400 LMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSK 459
           L+D   K G++  A+E L   MI  GI P    Y +L+DGFC    L+ A ++ D + SK
Sbjct: 350 LIDSFVKEGKLREAEE-LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 409

Query: 460 GCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQMGIKPCVITYNALLTGLFQSGKVDDA 519
           GC+PN+ ++ +LINGYCK  ++++ ++++ ++   G+    +TYN L+ G  + GK++ A
Sbjct: 410 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 469

Query: 520 KKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEAMEIFNELSYD-LKLNIGIFNCIIDG 579
           K++F  + +  + P+  T+ ILLDGLC N    +A+EIF ++    ++L+IGI+N II G
Sbjct: 470 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 529

Query: 580 LCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPD 639
           +C A KV+ AW+LF  L  KG+ P V T+NIMI G CK+G L +A  LF+KMEE+G  PD
Sbjct: 530 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 589

Query: 640 VITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPNTYTCSIVLYMLEDEKYRE-FLNLL 662
             TYN L++           V+L+ ++ +     +  T  +V+ ML D + ++ FL++L
Sbjct: 590 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636

[Close]

BLAST of CcUC01G008590 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 6.6e-109
Identity = 204/564 (36.17%), Postives = 336/564 (59.57%), Query Frame = 0


Query: 100 STTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLVLSGLAKIKHY 159
           S   + F++R R+ + + K       +A+  F   + + P P++  F+   S +A+ K +
Sbjct: 50  SNGNVCFRERLRSGIVDIK-----KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQF 109

Query: 160 FEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSL 219
             V     ++ L G+  N+ TLN+++NC C   +     + +  +++ GY P+T T+ +L
Sbjct: 110 NLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 169

Query: 220 IKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEMLNGTG 279
           IKGL +E ++ EA  L  RM + GC+PDV+TY +++ G+C++G+T++AL L  +M     
Sbjct: 170 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-- 229

Query: 280 RYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGK 339
               N K +V  Y+TIID LC+DG  D A+ LF+EM+ + I  +VV+Y SL+ G  ++GK
Sbjct: 230 ----NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 289

Query: 340 WEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYN 399
           W +   LL +M+ + + PN  TFNVL+D+  K G++  A EL +  MI  GI P++  YN
Sbjct: 290 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK-EMITRGISPNIITYN 349

Query: 400 TLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQM 459
           TL+DG+C+   L+ A  + D +    C P++V++T LI GYC   +V++ MK++  + + 
Sbjct: 350 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 409

Query: 460 GIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEA 519
           G+    +TY+ L+ G  QSGK+  A+++F  + + G++P   T+ ILLDGLC N  L +A
Sbjct: 410 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 469

Query: 520 MEIFNELSYD-LKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYG 579
           +EIF +L    + L I ++  II+G+CK GKVE AW LF  L  KG+ PNV+T+ +MI G
Sbjct: 470 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 529

Query: 580 YCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPN 639
            CK+G L +A  L +KMEE+G  P+  TYNTL++   +        +L+ +M       +
Sbjct: 530 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 589

Query: 640 TYTCSIVLYM-LEDEKYREFLNLL 662
             +  +V+ M L  E  + FL++L
Sbjct: 590 ASSIKMVIDMLLSGELDKSFLDML 601

[Close]

BLAST of CcUC01G008590 vs. ExPASy Swiss-Prot
Match: Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.3e-108
Identity = 209/573 (36.47%), Postives = 343/573 (59.86%), Query Frame = 0


Query: 126 EALQFFDLSMNAYPTPAMSSFNLVLSGLAKIKHYFEVFQL-------------------- 185
           +A+  F   + + P P++  FN +LS +AK+K +  V  L                    
Sbjct: 68  DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127

Query: 186 -----YYRISLA----------GLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYT 245
                  +ISLA          G  P+++TL+ L+N  C+  R+S+ +A +  ++  GY 
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187

Query: 246 PNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKL 305
           P+T+T+T+LI GL + ++  EA  L  RM + GC+P+++TYG ++ GLC+ G+T++AL L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247

Query: 306 HEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSL 365
             +M           + +V+ +NTIID LCK    D A+ LF+EM+ + I PNVV+Y+SL
Sbjct: 248 LNKM------EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 307

Query: 366 IHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSG 425
           I      G+W +A  LL++M+++ + PN  TFN L+D   K G+ + A++L +  MI+  
Sbjct: 308 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD-DMIKRS 367

Query: 426 IVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAM 485
           I P +F YN+L++GFC+   L+ A+++F+ + SK C P++V+Y  LI G+CK+ +VE+  
Sbjct: 368 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 427

Query: 486 KIYNELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGL 545
           +++ E+   G+    +TY  L+ GLF  G  D+A+K+F  + +DG+ P   T+SILLDGL
Sbjct: 428 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 487

Query: 546 CKNDCLLEAMEIFNEL-SYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNV 605
           C N  L +A+E+F+ +   ++KL+I I+  +I+G+CKAGKV+  W+LF  LS KG+ PNV
Sbjct: 488 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 547

Query: 606 VTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHK 662
           VT+N MI G C +  L +AY L +KM+E+G  P+  TYNTL++   +   +    EL+ +
Sbjct: 548 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 607

[Close]

BLAST of CcUC01G008590 vs. ExPASy Swiss-Prot
Match: Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 391.7 bits (1005), Expect = 1.6e-107
Identity = 204/560 (36.43%), Postives = 331/560 (59.11%), Query Frame = 0


Query: 139 PTPAMSSFNLVLSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCL---------- 198
           P P++  FN +LS +AK+K +  V  L  ++   G+  NL T N+L+NC           
Sbjct: 6   PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65

Query: 199 -------------------------CNVNRVSEGLAAMAGIIRRGYTPNTVTYTSLIKGL 258
                                    C+  R+S+ +A +  ++  GY P+T+T+T+LI GL
Sbjct: 66  ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125

Query: 259 CMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEMLNGTGRYGI 318
            + ++  EA  L  RM + GC+P+++TYG ++ GLC+ G+ ++A  L  +M         
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM------EAA 185

Query: 319 NCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGKWEEA 378
             + +V+ +NTIID LCK    D A+ LF+EM+ + I PNVV+Y+SLI      G+W +A
Sbjct: 186 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 245

Query: 379 KCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLD 438
             LL++M+++ + PN  TFN L+D   K G+ + A++L +  MI+  I P +F YN+L++
Sbjct: 246 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD-DMIKRSIDPDIFTYNSLIN 305

Query: 439 GFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQMGIKP 498
           GFC+   L+ A+++F+ + SK C P+L +Y  LI G+CK+ +VE+  +++ E+   G+  
Sbjct: 306 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 365

Query: 499 CVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEAMEIF 558
             +TY  L+ GLF  G  D+A+K+F  + +DG+ P   T+SILLDGLC N  L +A+E+F
Sbjct: 366 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 425

Query: 559 NEL-SYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYGYCKE 618
           + +   ++KL+I I+  +I+G+CKAGKV+  W+LF  LS KG+ PNVVT+N MI G C +
Sbjct: 426 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 485

Query: 619 GQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPNTYTC 662
             L +AY L +KM+E+G  PD  TYNTL++   +   +    EL+ +M     + +  T 
Sbjct: 486 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 545

[Close]

BLAST of CcUC01G008590 vs. ExPASy TrEMBL
Match: A0A6J1JSG4 (pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima OX=3661 GN=LOC111488506 PE=4 SV=1)

HSP 1 Score: 1009.2 bits (2608), Expect = 8.0e-291
Identity = 505/643 (78.54%), Postives = 567/643 (88.18%), Query Frame = 0


Query: 37  MVSKTVSSALS----PPPSKPKLSSLFLFTHPQTIASSDPQNPSPIPSKSPHLLSKP--- 96
           MVSKTV+SA+S    P PSK KLSS  LFTHP  IASS PQNPSPI ++SP ++SKP   
Sbjct: 1   MVSKTVASAISSSLLPAPSKGKLSS--LFTHPTIIASSKPQNPSPISAESPPVISKPPNS 60

Query: 97  TVSPHISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLV 156
            VSP +S +KSTT +SF +R RTFLQN KTGNFT SEALQFFDL M A PTPAMSSFNL+
Sbjct: 61  NVSPEVSLEKSTTEISFHERLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLL 120

Query: 157 LSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGY 216
           L GLAK KHY EV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRGY
Sbjct: 121 LGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGY 180

Query: 217 TPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALK 276
            PN VTYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLI+GLCQTGNTNIALK
Sbjct: 181 VPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALK 240

Query: 277 LHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTS 336
           LHEEMLNGTGRYGI+CKPNVICY+TIIDGLCKDG+EDKA ELFEEMKARR+LP+V+SY+S
Sbjct: 241 LHEEMLNGTGRYGISCKPNVICYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSS 300

Query: 337 LIHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQS 396
           LIHGF   GKWEEAKCL NEM+D G+QPNA TFNVLMD+LCK G+VI A +LLEV MIQ 
Sbjct: 301 LIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANKLLEV-MIQR 360

Query: 397 GIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEA 456
           G VP LF YNTL+DGFCLV DL SARELF S+PSKGCEPN++SY VLINGYCKN KVEEA
Sbjct: 361 GNVPDLFIYNTLMDGFCLVSDLESARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEA 420

Query: 457 MKIYNELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDG 516
           MKIYNE+LQ+G+KP VITYNALLTGLFQ+GKVDDAKKIFGVIQA GLVPSS T SI +DG
Sbjct: 421 MKIYNEMLQVGVKPSVITYNALLTGLFQAGKVDDAKKIFGVIQAHGLVPSSSTLSIFVDG 480

Query: 517 LCKNDCLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNV 576
           LCKNDCLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +G LPNV
Sbjct: 481 LCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGFLPNV 540

Query: 577 VTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHK 636
           VT++I+I+G CKEGQ++KA DLF+KMEENGCTP+VITYNTLL+GFYKSNKRE +VELLH+
Sbjct: 541 VTYSILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHR 600

Query: 637 MVQKNVLPNTYTCSIVLYML-EDEKYREFLNLLPTFPTQECQG 672
           MV KNV+P+  TC+IVL ML EDEKYR  LNLLPTFP Q+ +G
Sbjct: 601 MVNKNVVPDASTCTIVLDMLSEDEKYRGCLNLLPTFPVQDYRG 640

[Close]

BLAST of CcUC01G008590 vs. ExPASy TrEMBL
Match: A0A6J1GP31 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456184 PE=4 SV=1)

HSP 1 Score: 1004.2 bits (2595), Expect = 2.6e-289
Identity = 500/638 (78.37%), Postives = 566/638 (88.71%), Query Frame = 0


Query: 38  VSKTVSSALSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPIPSKSPHLLSKP---TVSPH 97
           V+  +SS+LSP PSK KLSS  LFT P  IASS+PQNPSPIP++SP ++SKP    VSP 
Sbjct: 6   VASAISSSLSPAPSKGKLSS--LFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNVSPE 65

Query: 98  ISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLVLSGLA 157
           +S +KSTT +SF  R RTFLQN KTGNFT SEALQFFDL M A PTPAMSSFNL+L GLA
Sbjct: 66  VSLEKSTTEISFHGRLRTFLQNCKTGNFTVSEALQFFDLMMLANPTPAMSSFNLLLGGLA 125

Query: 158 KIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTV 217
           K KHY EV +LYYR+SLAGLLPN ITLN+L+NCLCNVNR+SEGLAAMAGIIRRG+ PN V
Sbjct: 126 KTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIV 185

Query: 218 TYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEM 277
           TYTSLIKGLCMEHRI EATRLFMRMQKLGCRP+VITYGTLI+GLCQTGNTNIALKLHEEM
Sbjct: 186 TYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEM 245

Query: 278 LNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGF 337
           LNGTGRYGI+CKPNVI Y+TIIDGLCKDG+EDKA ELFEEMKARR+LP+V+SY+SLIHGF
Sbjct: 246 LNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGF 305

Query: 338 GRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPS 397
              GKWEEAKCL NEM+D G+QPNA TFNVLMD+LCK G+VI A ELLEV MIQ G VP 
Sbjct: 306 CNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEV-MIQRGNVPD 365

Query: 398 LFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYN 457
           LF YNTL+DGFCLV DL+SARELF S+PSKGCEPN++SY VLINGYCKN KVEEAMKIYN
Sbjct: 366 LFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYN 425

Query: 458 ELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKND 517
           E+LQ+GIKP +ITYNALLTGLFQ+GKV+DAKKIFGVIQA GLVPSS T SI +DGLCKND
Sbjct: 426 EMLQVGIKPSMITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKND 485

Query: 518 CLLEAMEIFNELSYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNI 577
           CLLEAMEIFNELSY+LKL+I IFNC+IDGLCKAGK+ETAWE F+K+S +GLLPNVVT++I
Sbjct: 486 CLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSI 545

Query: 578 MIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKN 637
           +I+G CKEGQ++KA DLF+KMEENGCTP+VITYNTLL+GFYKSNKRE +VELLH+MV+KN
Sbjct: 546 LIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKN 605

Query: 638 VLPNTYTCSIVLYML-EDEKYREFLNLLPTFPTQECQG 672
           V+P+  TC+IVL ML +DEKYR  LNLLPTFP QE +G
Sbjct: 606 VVPDASTCTIVLDMLSKDEKYRGCLNLLPTFPVQEYRG 640

[Close]

BLAST of CcUC01G008590 vs. ExPASy TrEMBL
Match: A0A6J1DSW3 (pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charantia OX=3673 GN=LOC111022854 PE=4 SV=1)

HSP 1 Score: 956.1 bits (2470), Expect = 8.0e-275
Identity = 481/646 (74.46%), Postives = 549/646 (84.98%), Query Frame = 0


Query: 37  MVSKTVSSA------LSPPPSKPKLSSLFLFTHPQTIASSDPQNPSPIPSKSPHLLS--- 96
           MVSK+V+SA       S  P+K KLSS  LFT    I SS+PQ      SK P LLS   
Sbjct: 1   MVSKSVASASSVVAVSSSAPAKGKLSS--LFTQSPRIRSSNPQVSPGSSSKRPPLLSRPP 60

Query: 97  KPTVSPHISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFN 156
           KPTVSP  SP++ TTG+SFQ RHRTFLQN KTGN TA+EALQFFDL +   PTPAMSSFN
Sbjct: 61  KPTVSPEDSPEELTTGISFQDRHRTFLQNCKTGNVTAAEALQFFDLMLRTKPTPAMSSFN 120

Query: 157 LVLSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRR 216
           L+L GLAKIKHY EV  LY R+SLAG+LPN ITLN+L+NCLCNVNRVSEGLAAMAGIIRR
Sbjct: 121 LLLGGLAKIKHYSEVLSLYDRMSLAGILPNYITLNILLNCLCNVNRVSEGLAAMAGIIRR 180

Query: 217 GYTPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIA 276
           GY PN VTYTSLIKGLCMEHRI EATRLFMRMQKLGC P+VITYGTLI+GLCQTGNTNIA
Sbjct: 181 GYIPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCTPNVITYGTLIKGLCQTGNTNIA 240

Query: 277 LKLHEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSY 336
           LKLHEEMLNGTGRYGI CKPNVICY+TIIDGLCKDG EDKA ELFEEMKA+ +LP+V+SY
Sbjct: 241 LKLHEEMLNGTGRYGITCKPNVICYSTIIDGLCKDGLEDKARELFEEMKAQGMLPDVISY 300

Query: 337 TSLIHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMI 396
           +SLIHGF   GKWEEAK L NEM+D GVQPN  TFNVLMDMLCK G+VI AKELLE+M+ 
Sbjct: 301 SSLIHGFCYGGKWEEAKSLFNEMVDHGVQPNVVTFNVLMDMLCKAGKVIEAKELLELMVQ 360

Query: 397 QSGIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVE 456
                P LF YNTL+DGFCLVGDLNSARELF ++P+KGCEPN++SY VLINGYCKN K+E
Sbjct: 361 GGNNAPDLFTYNTLMDGFCLVGDLNSARELFINMPNKGCEPNVISYNVLINGYCKNWKME 420

Query: 457 EAMKIYNELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILL 516
           EAMK+YNE+LQ+GI+P VITYN+LLTGLFQ+G V DAKK+FGVIQA+GL PSS T+S  L
Sbjct: 421 EAMKLYNEMLQVGIRPSVITYNSLLTGLFQAGMVVDAKKLFGVIQANGLAPSSSTYSTFL 480

Query: 517 DGLCKNDCLLEAMEIFNELS-YDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLL 576
           DGLCKNDCLLEA+E+FN L  Y+LKLNI IFNC+IDGLCKAGK+ETAWELF+K S +GLL
Sbjct: 481 DGLCKNDCLLEAIELFNGLKPYNLKLNIEIFNCLIDGLCKAGKLETAWELFDKFSLEGLL 540

Query: 577 PNVVTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVEL 636
           PNVVT++IMI+G CK+GQL+KA DLF+KMEENGCTP++ITYNTL++GFY++NK E +VEL
Sbjct: 541 PNVVTYSIMIHGLCKDGQLEKAIDLFRKMEENGCTPNIITYNTLMRGFYENNKPEEVVEL 600

Query: 637 LHKMVQKNVLPNTYTCSIVLYML-EDEKYREFLNLLPTFPTQECQG 672
           LH+MV+KNVLP+  TC+IVL ML EDEKY+E LNLLP FP QEC+G
Sbjct: 601 LHRMVKKNVLPDASTCTIVLDMLSEDEKYQECLNLLPRFPAQECRG 644

[Close]

BLAST of CcUC01G008590 vs. ExPASy TrEMBL
Match: A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 1.2e-222
Identity = 378/561 (67.38%), Postives = 469/561 (83.60%), Query Frame = 0


Query: 113 FLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLVLSGLAKIKHYFEVFQLYYRISLA 172
           FL+N KTGN TA++A  FFDL + +YP P++SSF+ +L GLAKIKHY  +F LY ++ LA
Sbjct: 10  FLRNCKTGNITATQAFHFFDLMLRSYPIPSISSFDCLLGGLAKIKHYSLLFSLYNKMRLA 69

Query: 173 GLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEA 232
           GL P+ ITLN+LVNCLCNVNRVSE LA MAG++RRGY PN VTYT+LIKGLCMEHRI EA
Sbjct: 70  GLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRISEA 129

Query: 233 TRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEMLNGTGRYGINCKPNVICY 292
           TRLF+RMQKLGC P+V+TYGTL++GLCQTGN NIALKLH+EMLN T +YGINCKPNV  Y
Sbjct: 130 TRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNVFNY 189

Query: 293 NTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGKWEEAKCLLNEMMD 352
           N IIDGLCK G+ED+A ELFEEMKA+ ++PNV+SY+SLIHGF  + KWEE+K L +EM+D
Sbjct: 190 NIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDEMVD 249

Query: 353 QGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLN 412
           QGVQP+  TF+VL+D LCK G+VI AK+L EV MIQ GIVP LF Y++L++GFC+VGDLN
Sbjct: 250 QGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEV-MIQRGIVPDLFIYSSLMEGFCMVGDLN 309

Query: 413 SARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQMGIKPCVITYNALL 472
           SARELF S+PSKGCEP+++SYTVLINGYCK  KVEEAMK+YNE+L +G +P VITY ALL
Sbjct: 310 SARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGALL 369

Query: 473 TGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEAMEIFNEL-SYDLK 532
           TGLF +GKV DAKK+F  ++A G+  +S  + I+LDGLCKN CL EAM++F EL SY+ K
Sbjct: 370 TGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYNFK 429

Query: 533 LNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYGYCKEGQLDKAYDL 592
           L+I  ++C+IDGLCK GK+ETAWELF KLS +GL PNVVT++IMI+G C+EGQ+DKA  L
Sbjct: 430 LDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKANVL 489

Query: 593 FQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPNTYTCSIVLYML-E 652
            QKME NGC P++ITYNTL++GFY+SNK + +V+LLH MV+K+VLP+  TCSIV+ ML +
Sbjct: 490 IQKMETNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDMLCK 549

Query: 653 DEKYREFLNLLPTFPTQECQG 672
           DEKY+E L+LLP F  Q+ QG
Sbjct: 550 DEKYQECLDLLPRFSVQKHQG 569

[Close]

BLAST of CcUC01G008590 vs. ExPASy TrEMBL
Match: A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1)

HSP 1 Score: 781.9 bits (2018), Expect = 2.1e-222
Identity = 378/561 (67.38%), Postives = 468/561 (83.42%), Query Frame = 0


Query: 113 FLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLVLSGLAKIKHYFEVFQLYYRISLA 172
           FL+N KTGN TA++A  FFDL + +YP P +SSF+ +L GLAKIKHY  +F LY ++ LA
Sbjct: 10  FLRNCKTGNITATQAFHFFDLMLRSYPIPPISSFDCLLGGLAKIKHYSLLFSLYNKMRLA 69

Query: 173 GLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEA 232
           GL P+ ITLN+LVNCLCNVNRVSE LA MAG++RRGY PN VTYT+LIKGLCMEHRI EA
Sbjct: 70  GLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHRISEA 129

Query: 233 TRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEMLNGTGRYGINCKPNVICY 292
           TRLF+RMQKLGC P+V+TYGTL++GLCQTGN NIALKLH+EMLN T +YGINCKPNV  Y
Sbjct: 130 TRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPNVFNY 189

Query: 293 NTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGKWEEAKCLLNEMMD 352
           N IIDGLCK G+ED+A ELFEEMKA+ ++PNV+SY+SLIHGF  + KWEE+K L +EM+D
Sbjct: 190 NIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDEMVD 249

Query: 353 QGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLN 412
           QGVQP+  TF+VL+D LCK G+VI AK+L EV MIQ GIVP LF Y++L++GFC+VGDLN
Sbjct: 250 QGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEV-MIQRGIVPDLFIYSSLMEGFCMVGDLN 309

Query: 413 SARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQMGIKPCVITYNALL 472
           SARELF S+PSKGCEP+++SYTVLINGYCK  KVEEAMK+YNE+L +G +P VITY ALL
Sbjct: 310 SARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVITYGALL 369

Query: 473 TGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEAMEIFNEL-SYDLK 532
           TGLF +GKV DAKK+F  ++A G+  +S  + I+LDGLCKN CL EAM++F EL SY+ K
Sbjct: 370 TGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCLFEAMKLFTELKSYNFK 429

Query: 533 LNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYGYCKEGQLDKAYDL 592
           L+I  ++C+IDGLCK GK+ETAWELF KLS +GL PNVVT++IMI+G C+EGQ+DKA  L
Sbjct: 430 LDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKANVL 489

Query: 593 FQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPNTYTCSIVLYML-E 652
            QKME NGC P++ITYNTL++GFY+SNK + +V+LLH MV+K+VLP+  TCSIV+ ML +
Sbjct: 490 IQKMETNGCNPNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDMLCK 549

Query: 653 DEKYREFLNLLPTFPTQECQG 672
           DEKY+E L+LLP F  Q+ QG
Sbjct: 550 DEKYQECLDLLPRFSVQKHQG 569

[Close]

BLAST of CcUC01G008590 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 407.5 bits (1046), Expect = 2.0e-113
Identity = 225/613 (36.70%), Postives = 352/613 (57.42%), Query Frame = 0


Query: 80  SKSPHLLSKPTVSPHISPKKSTTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYP 139
           S    +L K T   H S   +   LS+++R R  + + K      ++A+  F+  + + P
Sbjct: 13  SNFTQILEKGTSLLHYS-SITEAKLSYKERLRNGIVDIK-----VNDAIDLFESMIQSRP 72

Query: 140 TPAMSSFNLVLSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLA 199
            P    FN + S +A+ K Y  V      + L G+  ++ T+ +++NC C   ++    +
Sbjct: 73  LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 132

Query: 200 AMAGIIRRGYTPNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLC 259
            +    + GY P+T+T+++L+ G C+E R+ EA  L  RM ++  RPD++T  TLI GLC
Sbjct: 133 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 192

Query: 260 QTGNTNIALKLHEEML--------------------NGTGRYGI---------NCKPNVI 319
             G  + AL L + M+                    +G     +         N K +V+
Sbjct: 193 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 252

Query: 320 CYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGKWEEAKCLLNEM 379
            Y+ +ID LCKDG  D A+ LF EM+ + I  +VV+Y+SLI G    GKW++   +L EM
Sbjct: 253 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 312

Query: 380 MDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGD 439
           + + + P+  TF+ L+D+  K G+++ AKEL    MI  GI P    YN+L+DGFC    
Sbjct: 313 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN-EMITRGIAPDTITYNSLIDGFCKENC 372

Query: 440 LNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQMGIKPCVITYNA 499
           L+ A ++FD + SKGCEP++V+Y++LIN YCK  +V++ M+++ E+   G+ P  ITYN 
Sbjct: 373 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 432

Query: 500 LLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEAMEIFNELSYD- 559
           L+ G  QSGK++ AK++F  + + G+ PS  T+ ILLDGLC N  L +A+EIF ++    
Sbjct: 433 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 492

Query: 560 LKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYGYCKEGQLDKAY 619
           + L IGI+N II G+C A KV+ AW LF  LS KG+ P+VVT+N+MI G CK+G L +A 
Sbjct: 493 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 552

Query: 620 DLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPNTYTCSIVLYML 662
            LF+KM+E+GCTPD  TYN L++     +     VEL+ +M       ++ T  +V+ ML
Sbjct: 553 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 612

[Close]

BLAST of CcUC01G008590 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 396.7 bits (1018), Expect = 3.6e-110
Identity = 218/599 (36.39%), Postives = 346/599 (57.76%), Query Frame = 0


Query: 100 STTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLVLSGLAKIKHY 159
           S   LS+++R R+ L + K     A +A+  F   +++ P P +  F+ + S +AK K Y
Sbjct: 50  SDRNLSYRERLRSGLVDIK-----ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 109

Query: 160 FEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSL 219
             V  L  ++ L G+  NL TL++++NC C   ++    +AM  II+ GY PNT+T+++L
Sbjct: 110 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 169

Query: 220 IKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEMLNGTG 279
           I GLC+E R+ EA  L  RM ++G +PD+IT  TL+ GLC +G    A+ L ++M+    
Sbjct: 170 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV---- 229

Query: 280 RYGINCKP---------NVIC--------------------------YNTIIDGLCKDGQ 339
            YG  C+P         NV+C                          Y+ IIDGLCK G 
Sbjct: 230 EYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 289

Query: 340 EDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNV 399
            D A  LF EM+ + I  N+++Y  LI GF  +G+W++   LL +M+ + + PN  TF+V
Sbjct: 290 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 349

Query: 400 LMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSK 459
           L+D   K G++  A+E L   MI  GI P    Y +L+DGFC    L+ A ++ D + SK
Sbjct: 350 LIDSFVKEGKLREAEE-LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 409

Query: 460 GCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQMGIKPCVITYNALLTGLFQSGKVDDA 519
           GC+PN+ ++ +LINGYCK  ++++ ++++ ++   G+    +TYN L+ G  + GK++ A
Sbjct: 410 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 469

Query: 520 KKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEAMEIFNELSYD-LKLNIGIFNCIIDG 579
           K++F  + +  + P+  T+ ILLDGLC N    +A+EIF ++    ++L+IGI+N II G
Sbjct: 470 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 529

Query: 580 LCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPD 639
           +C A KV+ AW+LF  L  KG+ P V T+NIMI G CK+G L +A  LF+KMEE+G  PD
Sbjct: 530 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 589

Query: 640 VITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPNTYTCSIVLYMLEDEKYRE-FLNLL 662
             TYN L++           V+L+ ++ +     +  T  +V+ ML D + ++ FL++L
Sbjct: 590 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636

[Close]

BLAST of CcUC01G008590 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 393.7 bits (1010), Expect = 3.0e-109
Identity = 200/551 (36.30%), Postives = 329/551 (59.71%), Query Frame = 0


Query: 100 STTGLSFQQRHRTFLQNYKTGNFTASEALQFFDLSMNAYPTPAMSSFNLVLSGLAKIKHY 159
           S   + F++R R+ + + K       +A+  F   + + P P++  F+   S +A+ K +
Sbjct: 50  SNGNVCFRERLRSGIVDIK-----KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQF 109

Query: 160 FEVFQLYYRISLAGLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYTPNTVTYTSL 219
             V     ++ L G+  N+ TLN+++NC C   +     + +  +++ GY P+T T+ +L
Sbjct: 110 NLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 169

Query: 220 IKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEMLNGTG 279
           IKGL +E ++ EA  L  RM + GC+PDV+TY +++ G+C++G+T++AL L  +M     
Sbjct: 170 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-- 229

Query: 280 RYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGK 339
               N K +V  Y+TIID LC+DG  D A+ LF+EM+ + I  +VV+Y SL+ G  ++GK
Sbjct: 230 ----NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 289

Query: 340 WEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYN 399
           W +   LL +M+ + + PN  TFNVL+D+  K G++  A EL +  MI  GI P++  YN
Sbjct: 290 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK-EMITRGISPNIITYN 349

Query: 400 TLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQM 459
           TL+DG+C+   L+ A  + D +    C P++V++T LI GYC   +V++ MK++  + + 
Sbjct: 350 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 409

Query: 460 GIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEA 519
           G+    +TY+ L+ G  QSGK+  A+++F  + + G++P   T+ ILLDGLC N  L +A
Sbjct: 410 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 469

Query: 520 MEIFNELSYD-LKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYG 579
           +EIF +L    + L I ++  II+G+CK GKVE AW LF  L  KG+ PNV+T+ +MI G
Sbjct: 470 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 529

Query: 580 YCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPN 639
            CK+G L +A  L +KMEE+G  P+  TYNTL++   +        +L+ +M       +
Sbjct: 530 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 588

Query: 640 TYTCSIVLYML 650
             +  +V+ ML
Sbjct: 590 ASSIKMVIDML 588

[Close]

BLAST of CcUC01G008590 vs. TAIR 10
Match: AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 393.7 bits (1010), Expect = 3.0e-109
Identity = 209/573 (36.47%), Postives = 343/573 (59.86%), Query Frame = 0


Query: 126 EALQFFDLSMNAYPTPAMSSFNLVLSGLAKIKHYFEVFQL-------------------- 185
           +A+  F   + + P P++  FN +LS +AK+K +  V  L                    
Sbjct: 68  DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127

Query: 186 -----YYRISLA----------GLLPNLITLNVLVNCLCNVNRVSEGLAAMAGIIRRGYT 245
                  +ISLA          G  P+++TL+ L+N  C+  R+S+ +A +  ++  GY 
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187

Query: 246 PNTVTYTSLIKGLCMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKL 305
           P+T+T+T+LI GL + ++  EA  L  RM + GC+P+++TYG ++ GLC+ G+T++AL L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247

Query: 306 HEEMLNGTGRYGINCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSL 365
             +M           + +V+ +NTIID LCK    D A+ LF+EM+ + I PNVV+Y+SL
Sbjct: 248 LNKM------EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 307

Query: 366 IHGFGRSGKWEEAKCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSG 425
           I      G+W +A  LL++M+++ + PN  TFN L+D   K G+ + A++L +  MI+  
Sbjct: 308 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD-DMIKRS 367

Query: 426 IVPSLFNYNTLLDGFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAM 485
           I P +F YN+L++GFC+   L+ A+++F+ + SK C P++V+Y  LI G+CK+ +VE+  
Sbjct: 368 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 427

Query: 486 KIYNELLQMGIKPCVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGL 545
           +++ E+   G+    +TY  L+ GLF  G  D+A+K+F  + +DG+ P   T+SILLDGL
Sbjct: 428 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 487

Query: 546 CKNDCLLEAMEIFNEL-SYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNV 605
           C N  L +A+E+F+ +   ++KL+I I+  +I+G+CKAGKV+  W+LF  LS KG+ PNV
Sbjct: 488 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 547

Query: 606 VTHNIMIYGYCKEGQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHK 662
           VT+N MI G C +  L +AY L +KM+E+G  P+  TYNTL++   +   +    EL+ +
Sbjct: 548 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 607

[Close]

BLAST of CcUC01G008590 vs. TAIR 10
Match: AT1G63330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 391.7 bits (1005), Expect = 1.2e-108
Identity = 204/560 (36.43%), Postives = 331/560 (59.11%), Query Frame = 0


Query: 139 PTPAMSSFNLVLSGLAKIKHYFEVFQLYYRISLAGLLPNLITLNVLVNCL---------- 198
           P P++  FN +LS +AK+K +  V  L  ++   G+  NL T N+L+NC           
Sbjct: 6   PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65

Query: 199 -------------------------CNVNRVSEGLAAMAGIIRRGYTPNTVTYTSLIKGL 258
                                    C+  R+S+ +A +  ++  GY P+T+T+T+LI GL
Sbjct: 66  ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125

Query: 259 CMEHRIGEATRLFMRMQKLGCRPDVITYGTLIRGLCQTGNTNIALKLHEEMLNGTGRYGI 318
            + ++  EA  L  RM + GC+P+++TYG ++ GLC+ G+ ++A  L  +M         
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM------EAA 185

Query: 319 NCKPNVICYNTIIDGLCKDGQEDKAMELFEEMKARRILPNVVSYTSLIHGFGRSGKWEEA 378
             + +V+ +NTIID LCK    D A+ LF+EM+ + I PNVV+Y+SLI      G+W +A
Sbjct: 186 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 245

Query: 379 KCLLNEMMDQGVQPNATTFNVLMDMLCKVGQVINAKELLEVMMIQSGIVPSLFNYNTLLD 438
             LL++M+++ + PN  TFN L+D   K G+ + A++L +  MI+  I P +F YN+L++
Sbjct: 246 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD-DMIKRSIDPDIFTYNSLIN 305

Query: 439 GFCLVGDLNSARELFDSLPSKGCEPNLVSYTVLINGYCKNGKVEEAMKIYNELLQMGIKP 498
           GFC+   L+ A+++F+ + SK C P+L +Y  LI G+CK+ +VE+  +++ E+   G+  
Sbjct: 306 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 365

Query: 499 CVITYNALLTGLFQSGKVDDAKKIFGVIQADGLVPSSDTFSILLDGLCKNDCLLEAMEIF 558
             +TY  L+ GLF  G  D+A+K+F  + +DG+ P   T+SILLDGLC N  L +A+E+F
Sbjct: 366 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 425

Query: 559 NEL-SYDLKLNIGIFNCIIDGLCKAGKVETAWELFNKLSHKGLLPNVVTHNIMIYGYCKE 618
           + +   ++KL+I I+  +I+G+CKAGKV+  W+LF  LS KG+ PNVVT+N MI G C +
Sbjct: 426 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 485

Query: 619 GQLDKAYDLFQKMEENGCTPDVITYNTLLQGFYKSNKREVMVELLHKMVQKNVLPNTYTC 662
             L +AY L +KM+E+G  PD  TYNTL++   +   +    EL+ +M     + +  T 
Sbjct: 486 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 545

The following BLAST results are available for this feature:

BLAST of CcUC01G008590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874245.1	3.3e-299	80.72	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benin...	[more]
XP_023548637.1	1.6e-290	78.69	pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp...	[more]
XP_022992036.1	1.6e-290	78.54	pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima]	[more]
XP_022953742.1	5.3e-289	78.37	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [C...	[more]
KAG7014482.1	1.5e-288	78.23	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of CcUC01G008590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQ83	2.9e-112	36.70	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
Q0WKV3	5.1e-109	36.39	Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop...	[more]
P0C7Q7	6.6e-109	36.17	Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS...	[more]
Q9SXD8	4.3e-108	36.47	Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX...	[more]
Q9C8T7	1.6e-107	36.43	Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX...	[more]

BLAST of CcUC01G008590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSG4	8.0e-291	78.54	pentatricopeptide repeat-containing protein At1g63330-like OS=Cucurbita maxima O...	[more]
A0A6J1GP31	2.6e-289	78.37	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS...	[more]
A0A6J1DSW3	8.0e-275	74.46	pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charanti...	[more]
A0A5D3C8J0	1.2e-222	67.38	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DYL6	2.1e-222	67.38	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc...	[more]

BLAST of CcUC01G008590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22470.1	2.0e-113	36.70	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12300.1	3.6e-110	36.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12700.1	3.0e-109	36.30	ATP binding;nucleic acid binding;helicases	[more]
AT1G62590.1	3.0e-109	36.47	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G63330.1	1.2e-108	36.43	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 393..442 e-value: 5.7E-14 score: 52.0 coord: 463..512 e-value: 1.4E-13 score: 50.8 coord: 211..260 e-value: 1.9E-17 score: 63.2 coord: 287..334 e-value: 1.0E-17 score: 64.1 coord: 567..614 e-value: 1.4E-18 score: 66.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 290..324 e-value: 3.9E-11 score: 40.4 coord: 605..639 e-value: 3.4E-5 score: 21.7 coord: 325..359 e-value: 6.2E-11 score: 39.8 coord: 179..213 e-value: 0.0019 score: 16.3 coord: 570..604 e-value: 2.8E-13 score: 47.2 coord: 466..499 e-value: 1.8E-6 score: 25.7 coord: 398..429 e-value: 1.0E-7 score: 29.6 coord: 361..394 e-value: 7.6E-5 score: 20.6 coord: 214..248 e-value: 1.1E-8 score: 32.7 coord: 431..463 e-value: 2.2E-10 score: 38.0 coord: 536..569 e-value: 5.4E-9 score: 33.7 coord: 502..526 e-value: 4.3E-4 score: 18.3 coord: 249..275 e-value: 7.1E-5 score: 20.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 530..559 e-value: 8.0E-9 score: 35.1 coord: 354..385 e-value: 7.1E-7 score: 28.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 323..357 score: 13.800334
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 429..463 score: 14.534741
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 464..498 score: 10.939435
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 212..246 score: 12.75901
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 247..277 score: 10.117337
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 288..322 score: 13.504379
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 603..637 score: 10.928473
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 394..428 score: 11.8273
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 533..567 score: 12.189023
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 568..602 score: 14.677238
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 177..211 score: 9.13082
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 358..393 score: 10.906551
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 117..203 e-value: 1.9E-8 score: 36.1 coord: 279..386 e-value: 4.4E-37 score: 130.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 391..458 e-value: 9.8E-21 score: 76.1 coord: 204..278 e-value: 2.3E-23 score: 84.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 548..660 e-value: 1.9E-33 score: 117.3 coord: 459..547 e-value: 3.7E-22 score: 80.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..104
None	No IPR available	PANTHER	PTHR47938	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	coord: 285..646 coord: 137..420
None	No IPR available	PANTHER	PTHR47938:SF4	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 285..646 coord: 137..420
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 297..488

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G008590.1	CcUC01G008590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050794	regulation of cellular process
molecular_function	GO:0005515	protein binding