CcUC01G007370 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G007370
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr01: 7977230 .. 7977681 (+)
RNA-Seq ExpressionCcUC01G007370
SyntenyCcUC01G007370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATCATCATACAACACAAATCAAATTCCCAACCTCTTGACACCGCATTCTGAGCAGAACTTAGAGGTTTCTCTTAAATATGGAGCTCCACATTCATCACAGAACTTGGCAGGACTGGATGGCTGCAAATGTATGAGTATATCAGAAAATATATTAACTGGATGATATAAACTTAACCCACTTTCCCTCCAATCAGATATTAACATCAATCAATAAATCACATGACAGATGGGATGGGGGCCTTGGAATTACCAGCCCATGATGCAAACGCCCACCAACATGACCACCTGAAAGAGGTTGTAAGCAAGCTATGTGTTGTGACATTGTTGGAGAATGATGAGTATGAGAAATATCCTGTAACTGGGAAGGTTGACCACATTGATGATTGTGAGCAAAGTGGGGAGTATGTTGACTTTGGTGCATGGACTGATGATGATTCTGGTGGATAG

mRNA sequence

ATGATATCATCATACAACACAAATCAAATTCCCAACCTCTTGACACCGCATTCTGAGCAGAACTTAGAGGTTTCTCTTAAATATGGAGCTCCACATTCATCACAGAACTTGGCAGGACTGGATGGCTGCAAATATGGGATGGGGGCCTTGGAATTACCAGCCCATGATGCAAACGCCCACCAACATGACCACCTGAAAGAGGTTGTAAGCAAGCTATGTGTTGTGACATTGTTGGAGAATGATGAGTATGAGAAATATCCTGTAACTGGGAAGGTTGACCACATTGATGATTGTGAGCAAAGTGGGGAGTATGTTGACTTTGGTGCATGGACTGATGATGATTCTGGTGGATAG

Coding sequence (CDS)

ATGATATCATCATACAACACAAATCAAATTCCCAACCTCTTGACACCGCATTCTGAGCAGAACTTAGAGGTTTCTCTTAAATATGGAGCTCCACATTCATCACAGAACTTGGCAGGACTGGATGGCTGCAAATATGGGATGGGGGCCTTGGAATTACCAGCCCATGATGCAAACGCCCACCAACATGACCACCTGAAAGAGGTTGTAAGCAAGCTATGTGTTGTGACATTGTTGGAGAATGATGAGTATGAGAAATATCCTGTAACTGGGAAGGTTGACCACATTGATGATTGTGAGCAAAGTGGGGAGTATGTTGACTTTGGTGCATGGACTGATGATGATTCTGGTGGATAG

Protein sequence

MISSYNTNQIPNLLTPHSEQNLEVSLKYGAPHSSQNLAGLDGCKYGMGALELPAHDANAHQHDHLKEVVSKLCVVTLLENDEYEKYPVTGKVDHIDDCEQSGEYVDFGAWTDDDSGG
Homology
[Close]
BLAST of CcUC01G007370 vs. ExPASy TrEMBL
Match: A0A2N9IPH4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53911 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.0e-04
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0 

Query: 81  DEYEKYPVTGKVDHIDDCEQSGEYVDFGAWTDDDSG 117
           DE+EK+ ++ KV+H DDCE SG +VDF AW DDDSG
Sbjct: 10  DEHEKFQISVKVEHTDDCEDSGMHVDFDAWLDDDSG 45

The following BLAST results are available for this feature:
BLAST of CcUC01G007370 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC01G007370 vs.
Match NameE-valueIdentityDescription
BLAST of CcUC01G007370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N9IPH43.0e-0463.89Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53911 PE=4 SV=1[more]
BLAST of CcUC01G007370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G007370.1CcUC01G007370.1mRNA