CcUC01G006110 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G006110
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	zinc finger protein 6-like
Location	CicolChr01: 6235698 .. 6236357 (-)
RNA-Seq Expression	CcUC01G006110
Synteny	CcUC01G006110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCTCTAGAAGACCATTACCAAACCAAACAAAACAACAATAATAATCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATCTTGAAGACGATTCTGCCCCAACTCCCTCCGCCTCCTCCGATTCTGGCGGCGGACTAGGACCCACCGCCGCCGCCGCCGGCCCCTCCTCCGGCGACCGTAAATACGAGTGTCAGTACTGCTATAGAGAGTTCGCCAATTCCCAAGCTCTCGGCGGCCACCAAAATGCCCACAAGAAAGAGCGTCAGCAGCTCAAACGCGCCCAATTACAAGCCTCCCGAAACGCTGCCGTTTTTAGAAACCCCATCGTCTCTGCCTTTGCTCCGCCGCCTCACCTCCTCCCCTCCGCCGCCGTCACTTCCTCCTCTTCTTGGCCGGTTTACATCCCCCGGGCCCCACCTCAATTCCAAGTCTCCCACGGCTGTGTCTTCACTCCCTCGTCTTACGCCGACGCTCCACCGCCGCCTTCGCCGCCTGACTTCTTTACGATGGGGTCTCGGTCAGCTCATCGGATGGTGGATGCTCCGACGTCGCTGAGCCGGTTTTCTAAAGTGGACGGTGGAACCGGGTTCGATGATGGACCGGGTTTGGATTTGCATCTCAGCCTCGCACCGGCGGCACCATAA

mRNA sequence

ATGGCAGCTCTAGAAGACCATTACCAAACCAAACAAAACAACAATAATAATCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATCTTGAAGACGATTCTGCCCCAACTCCCTCCGCCTCCTCCGATTCTGGCGGCGGACTAGGACCCACCGCCGCCGCCGCCGGCCCCTCCTCCGGCGACCGTAAATACGAGTGTCAGTACTGCTATAGAGAGTTCGCCAATTCCCAAGCTCTCGGCGGCCACCAAAATGCCCACAAGAAAGAGCGTCAGCAGCTCAAACGCGCCCAATTACAAGCCTCCCGAAACGCTGCCGTTTTTAGAAACCCCATCGTCTCTGCCTTTGCTCCGCCGCCTCACCTCCTCCCCTCCGCCGCCGTCACTTCCTCCTCTTCTTGGCCGGTTTACATCCCCCGGGCCCCACCTCAATTCCAAGTCTCCCACGGCTGTGTCTTCACTCCCTCGTCTTACGCCGACGCTCCACCGCCGCCTTCGCCGCCTGACTTCTTTACGATGGGGTCTCGGTCAGCTCATCGGATGGTGGATGCTCCGACGTCGCTGAGCCGGTTTTCTAAAGTGGACGGTGGAACCGGGTTCGATGATGGACCGGGTTTGGATTTGCATCTCAGCCTCGCACCGGCGGCACCATAA

Coding sequence (CDS)

ATGGCAGCTCTAGAAGACCATTACCAAACCAAACAAAACAACAATAATAATCCCACTACTCGCTTGAAGCTCTTTGGCTTTGACGTCCAAGAAGATCTTGAAGACGATTCTGCCCCAACTCCCTCCGCCTCCTCCGATTCTGGCGGCGGACTAGGACCCACCGCCGCCGCCGCCGGCCCCTCCTCCGGCGACCGTAAATACGAGTGTCAGTACTGCTATAGAGAGTTCGCCAATTCCCAAGCTCTCGGCGGCCACCAAAATGCCCACAAGAAAGAGCGTCAGCAGCTCAAACGCGCCCAATTACAAGCCTCCCGAAACGCTGCCGTTTTTAGAAACCCCATCGTCTCTGCCTTTGCTCCGCCGCCTCACCTCCTCCCCTCCGCCGCCGTCACTTCCTCCTCTTCTTGGCCGGTTTACATCCCCCGGGCCCCACCTCAATTCCAAGTCTCCCACGGCTGTGTCTTCACTCCCTCGTCTTACGCCGACGCTCCACCGCCGCCTTCGCCGCCTGACTTCTTTACGATGGGGTCTCGGTCAGCTCATCGGATGGTGGATGCTCCGACGTCGCTGAGCCGGTTTTCTAAAGTGGACGGTGGAACCGGGTTCGATGATGGACCGGGTTTGGATTTGCATCTCAGCCTCGCACCGGCGGCACCATAA

Protein sequence

MAALEDHYQTKQNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAGPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFAPPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSYADAPPPPSPPDFFTMGSRSAHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP

Homology

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BLAST of CcUC01G006110 vs. NCBI nr
Match: XP_038875418.1 (zinc finger protein GIS3-like [Benincasa hispida])

HSP 1 Score: 397.5 bits (1020), Expect = 7.4e-107
Identity = 206/222 (92.79%), Postives = 209/222 (94.14%), Query Frame = 0


Query: 1   MAALEDHYQTKQ-NNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAG 60
           MAALE+HYQ+KQ NNNNNP TRLKLFGFDVQEDLEDDSAPTPSASSDSGGGL P +AAA 
Sbjct: 1   MAALENHYQSKQNNNNNNPATRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLTPASAAAP 60

Query: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120
           PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120

Query: 121 PPPHLLPSAA--VTSSSSWPVYIPRAPPQFQVSHGCVFTPSSYADAPPPPSPPDFFTMGS 180
           PPPHLLPSAA  VTSSSSWPVYIPR PPQFQVSHGCVFT SSYADAPPPP PPDFF MGS
Sbjct: 121 PPPHLLPSAAASVTSSSSWPVYIPRVPPQFQVSHGCVFTHSSYADAPPPPPPPDFF-MGS 180

Query: 181 RSAHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 220
           RS H MVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP
Sbjct: 181 RSGHGMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 221

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BLAST of CcUC01G006110 vs. NCBI nr
Match: TYK00272.1 (zinc finger protein 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 367.9 bits (943), Expect = 6.3e-98
Identity = 196/225 (87.11%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNP-TTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTAAAA 60
           MAALE+HYQTKQNNNNNP TTRLKLFGFDVQEDL +DDS PT   SSDSG        AA
Sbjct: 1   MAALENHYQTKQNNNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG--------AA 60

Query: 61  GPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAF 120
            PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AF
Sbjct: 61  VPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAF 120

Query: 121 APPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPSPPDFFT 180
           APPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPPSPPDFFT
Sbjct: 121 APPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGVDAPPPPSPPDFFT 180

Query: 181 MGSRSAHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 220
           MGSRS+H MVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAPAAP
Sbjct: 181 MGSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 214

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BLAST of CcUC01G006110 vs. NCBI nr
Match: XP_008467196.1 (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 367.9 bits (943), Expect = 6.3e-98
Identity = 196/225 (87.11%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNP-TTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTAAAA 60
           MAALE+HYQTKQNNNNNP TTRLKLFGFDVQEDL +DDS PT   SSDSG        AA
Sbjct: 1   MAALENHYQTKQNNNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG--------AA 60

Query: 61  GPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAF 120
            PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AF
Sbjct: 61  VPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAF 120

Query: 121 APPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPSPPDFFT 180
           APPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPPSPPDFFT
Sbjct: 121 APPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGGDAPPPPSPPDFFT 180

Query: 181 MGSRSAHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 220
           MGSRS+H MVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAPAAP
Sbjct: 181 MGSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 214

[Close]

BLAST of CcUC01G006110 vs. NCBI nr
Match: NP_001295848.1 (zinc finger protein 6-like [Cucumis sativus] >AIS39467.1 multicellular trichome development C2H2 zinc finger transcription factor [Cucumis sativus] >KGN51544.1 hypothetical protein Csa_008286 [Cucumis sativus])

HSP 1 Score: 366.3 bits (939), Expect = 1.8e-97
Identity = 194/224 (86.61%), Postives = 199/224 (88.84%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNPTTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTAAAAG 60
           MAALE+HYQTKQNNNN  TTRLKLFGFDVQEDL +DDS PT   SSDSG        AA 
Sbjct: 1   MAALENHYQTKQNNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG--------AAV 60

Query: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120
           PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AFA
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFA 120

Query: 121 PPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPSPPDFFTM 180
           PPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPPSPPDFFTM
Sbjct: 121 PPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGGDAPPPPSPPDFFTM 180

Query: 181 GSRSAHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 220
           GSRS+H MVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAPAAP
Sbjct: 181 GSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 213

[Close]

BLAST of CcUC01G006110 vs. NCBI nr
Match: XP_022939421.1 (zinc finger protein GIS3-like [Cucurbita moschata])

HSP 1 Score: 328.9 bits (842), Expect = 3.2e-86
Identity = 176/220 (80.00%), Postives = 185/220 (84.09%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAGP 60
           MAALE+HYQ+KQ   NNPTTRLKLFGFDVQEDLEDDS PTPSASSDS         AA P
Sbjct: 1   MAALEEHYQSKQ--TNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDS---------AAAP 60

Query: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFAP 120
           SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA VFRNPIVSAFAP
Sbjct: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIVSAFAP 120

Query: 121 PPHLLPSAAVTSSSSW-PVYIPRAPPQFQVSHGCVFTPSSYADAPPPPSPPDFFTMGSRS 180
           PPHLLPSA +TSSSSW PVY+P+APPQFQVSHGCVFT        PPP PP FF+ GSRS
Sbjct: 121 PPHLLPSAVLTSSSSWPPVYMPQAPPQFQVSHGCVFT--------PPPPPPPFFSTGSRS 180

Query: 181 AHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 220
           AH +VD P SLSRFS V+ G GFDDGPGLDLHLSLAP+AP
Sbjct: 181 AHGIVDGP-SLSRFSTVEDGPGFDDGPGLDLHLSLAPSAP 200

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BLAST of CcUC01G006110 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.5e-41
Identity = 119/238 (50.00%), Postives = 138/238 (57.98%), Query Frame = 0


Query: 14  NNNNPTTRLKLFGFDV--QEDLEDDSAPT------------PSASSDSGGGLGPTAAAAG 73
           ++   T+RLKLFGF V  +ED  D S  T            P+ SS   GG G  +   G
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGG-GVRSRGGG 66

Query: 74  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV---------- 133
              G+RKYECQYC REF NSQALGGHQNAHKKERQQLKRAQLQA+RNAA           
Sbjct: 67  GGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQ 126

Query: 134 -FRNPIVSAFAPPPHLLPSAAVTSSSSWP-VYIPR-APPQFQVSHGCVFTPSSYADAPPP 193
             RNPIVSAFAPPPHLL S+AV      P +Y+PR +P Q  VSHGCV    S       
Sbjct: 127 FLRNPIVSAFAPPPHLLSSSAVPQPMGGPWMYLPRVSPSQLHVSHGCVIQDGSGGAGAGG 186

Query: 194 PS------PPDFFTMGSRSAHRMVDAP-TSLSRFSKVDGGTGFDDGPGLDLHLSLAPA 218
            S         F  +G++  H     P  S++ FS+ + GT FDDG GLDLHLSLAPA
Sbjct: 187 FSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLSLAPA 242

[Close]

BLAST of CcUC01G006110 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 84/218 (38.53%), Postives = 101/218 (46.33%), Query Frame = 0


Query: 19  TTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAGPSSGDRKYECQYCYREFAN 78
           T+ LKLFG ++   LE  S    S+    G G G         S  RKYECQYC REFAN
Sbjct: 5   TSSLKLFGINL---LETTSVQNQSSEPRPGSGSG---------SESRKYECQYCCREFAN 64

Query: 79  SQALGGHQNAHKKERQQLKRAQLQASR------NAAVFRNPIVSAFAPPPHLLPSAAVTS 138
           SQALGGHQNAHKKERQ LKRAQ+ A+R      N     NP++SAFAP PHLL       
Sbjct: 65  SQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQ----- 124

Query: 139 SSSWPVYIPRAPPQFQVSHGCVFTPSSYADAPPPPSPPDFFTMG--------SRSAHRMV 198
                   P  PP   +S     +   Y +     +   +F  G           A  + 
Sbjct: 125 --------PHPPPHMMLSPSSSSSKWLYGEHMSSQNAVGYFHGGRGLYGGGMESMAGEVK 184

Query: 199 DAPTSLSRFSKVDG------GTGFDDGPGLDLHLSLAP 217
               SL    +  G      G   ++G GLDLHLSL P
Sbjct: 185 THGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of CcUC01G006110 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.7e-10
Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 0


Query: 11  KQNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAGPSSGDRKYECQ 70
           + ++ ++    +KLFGF++          T  + S S      T          +++ECQ
Sbjct: 12  ESSSGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVM--------KRHECQ 71

Query: 71  YCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVF-----RNPIVSAF 119
           YC +EFANSQALGGHQNAHKKER + KR QLQA R +  +     + PI ++F
Sbjct: 72  YCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSF 116

[Close]

BLAST of CcUC01G006110 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.2e-08
Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 8   YQTKQNNNNNPTTR-LKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAGPSSGDRK 67
           Y     N+ +P  R ++LFGF+     E+         S+S         +    + +++
Sbjct: 4   YDFMNVNSFSPKERPIRLFGFEFGASHEE---------SESKDNYNENNESIKDDNKEKR 63

Query: 68  YECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVF 111
           ++C YC+R F  SQALGGHQNAHK+ERQQ KR  L +  NAA F
Sbjct: 64  FKCHYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHS--NAAAF 96

[Close]

BLAST of CcUC01G006110 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQL 102
           ++ +R++EC YC+R F  SQALGGHQNAHK+ERQ  KR  +
Sbjct: 89  NNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSM 129

[Close]

BLAST of CcUC01G006110 vs. ExPASy TrEMBL
Match: A0A5D3BNG5 (Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00130 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.0e-98
Identity = 196/225 (87.11%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNP-TTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTAAAA 60
           MAALE+HYQTKQNNNNNP TTRLKLFGFDVQEDL +DDS PT   SSDSG        AA
Sbjct: 1   MAALENHYQTKQNNNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG--------AA 60

Query: 61  GPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAF 120
            PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AF
Sbjct: 61  VPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAF 120

Query: 121 APPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPSPPDFFT 180
           APPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPPSPPDFFT
Sbjct: 121 APPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGVDAPPPPSPPDFFT 180

Query: 181 MGSRSAHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 220
           MGSRS+H MVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAPAAP
Sbjct: 181 MGSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 214

[Close]

BLAST of CcUC01G006110 vs. ExPASy TrEMBL
Match: A0A1S3CSY8 (zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103504603 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.0e-98
Identity = 196/225 (87.11%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNP-TTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTAAAA 60
           MAALE+HYQTKQNNNNNP TTRLKLFGFDVQEDL +DDS PT   SSDSG        AA
Sbjct: 1   MAALENHYQTKQNNNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG--------AA 60

Query: 61  GPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAF 120
            PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AF
Sbjct: 61  VPSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAF 120

Query: 121 APPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPSPPDFFT 180
           APPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPPSPPDFFT
Sbjct: 121 APPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGGDAPPPPSPPDFFT 180

Query: 181 MGSRSAHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 220
           MGSRS+H MVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAPAAP
Sbjct: 181 MGSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 214

[Close]

BLAST of CcUC01G006110 vs. ExPASy TrEMBL
Match: A0A0A0KRQ5 (Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucumis sativus OX=3659 GN=Gl-3 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.8e-98
Identity = 194/224 (86.61%), Postives = 199/224 (88.84%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNPTTRLKLFGFDVQEDL-EDDSAPTPSASSDSGGGLGPTAAAAG 60
           MAALE+HYQTKQNNNN  TTRLKLFGFDVQEDL +DDS PT   SSDSG        AA 
Sbjct: 1   MAALENHYQTKQNNNNPATTRLKLFGFDVQEDLDQDDSTPT---SSDSG--------AAV 60

Query: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFA 120
           PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIV+AFA
Sbjct: 61  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVAAFA 120

Query: 121 PPPHLLPSAAVTSSSSWPVYIPRAPPQFQVSHGCVFTPSSY----ADAPPPPSPPDFFTM 180
           PPPHLLPSAAVT+SSSWPVYIPRAPPQFQVSHGCVFTPSS      DAPPPPSPPDFFTM
Sbjct: 121 PPPHLLPSAAVTASSSWPVYIPRAPPQFQVSHGCVFTPSSSYGGGGDAPPPPSPPDFFTM 180

Query: 181 GSRSAHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 220
           GSRS+H MVDAP SLSRFSKVDGGT FDDGPGLDLHLSLAPAAP
Sbjct: 181 GSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPGLDLHLSLAPAAP 213

[Close]

BLAST of CcUC01G006110 vs. ExPASy TrEMBL
Match: A0A6J1FFV2 (zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111445339 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.6e-86
Identity = 176/220 (80.00%), Postives = 185/220 (84.09%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAGP 60
           MAALE+HYQ+KQ   NNPTTRLKLFGFDVQEDLEDDS PTPSASSDS         AA P
Sbjct: 1   MAALEEHYQSKQ--TNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDS---------AAAP 60

Query: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFAP 120
           SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA VFRNPIVSAFAP
Sbjct: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIVSAFAP 120

Query: 121 PPHLLPSAAVTSSSSW-PVYIPRAPPQFQVSHGCVFTPSSYADAPPPPSPPDFFTMGSRS 180
           PPHLLPSA +TSSSSW PVY+P+APPQFQVSHGCVFT        PPP PP FF+ GSRS
Sbjct: 121 PPHLLPSAVLTSSSSWPPVYMPQAPPQFQVSHGCVFT--------PPPPPPPFFSTGSRS 180

Query: 181 AHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAAP 220
           AH +VD P SLSRFS V+ G GFDDGPGLDLHLSLAP+AP
Sbjct: 181 AHGIVDGP-SLSRFSTVEDGPGFDDGPGLDLHLSLAPSAP 200

[Close]

BLAST of CcUC01G006110 vs. ExPASy TrEMBL
Match: A0A6J1JUL8 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111489855 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.9e-85
Identity = 173/219 (79.00%), Postives = 183/219 (83.56%), Query Frame = 0


Query: 1   MAALEDHYQTKQNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAGP 60
           MAALE+HYQ+KQ  NNNPTTRLKLFGFDVQEDLEDDS PTPSASSDSG         A P
Sbjct: 1   MAALEEHYQSKQ--NNNPTTRLKLFGFDVQEDLEDDSTPTPSASSDSG---------AAP 60

Query: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVFRNPIVSAFAP 120
           SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQ KRAQLQASRNA VFRNPIVSAFAP
Sbjct: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQHKRAQLQASRNATVFRNPIVSAFAP 120

Query: 121 PPHLLPSAAVTSSSSW-PVYIPRAPPQFQVSHGCVFTPSSYADAPPPPSPPDFFTMGSRS 180
           PPHLLPSA +TSSSSW PVY+P+ PPQFQVSHGCVFT        PPP PP FF+ GSRS
Sbjct: 121 PPHLLPSAVLTSSSSWPPVYMPQLPPQFQVSHGCVFT--------PPPPPPPFFSTGSRS 180

Query: 181 AHRMVDAPTSLSRFSKVDGGTGFDDGPGLDLHLSLAPAA 219
            H +VD P SLSRFS V+ G GFDDGPGLDLHLSLAP++
Sbjct: 181 PHGIVDGP-SLSRFSTVEDGPGFDDGPGLDLHLSLAPSS 199

[Close]

BLAST of CcUC01G006110 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-42
Identity = 119/238 (50.00%), Postives = 138/238 (57.98%), Query Frame = 0


Query: 14  NNNNPTTRLKLFGFDV--QEDLEDDSAPT------------PSASSDSGGGLGPTAAAAG 73
           ++   T+RLKLFGF V  +ED  D S  T            P+ SS   GG G  +   G
Sbjct: 7   SSKTTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGG-GVRSRGGG 66

Query: 74  PSSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAV---------- 133
              G+RKYECQYC REF NSQALGGHQNAHKKERQQLKRAQLQA+RNAA           
Sbjct: 67  GGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQ 126

Query: 134 -FRNPIVSAFAPPPHLLPSAAVTSSSSWP-VYIPR-APPQFQVSHGCVFTPSSYADAPPP 193
             RNPIVSAFAPPPHLL S+AV      P +Y+PR +P Q  VSHGCV    S       
Sbjct: 127 FLRNPIVSAFAPPPHLLSSSAVPQPMGGPWMYLPRVSPSQLHVSHGCVIQDGSGGAGAGG 186

Query: 194 PS------PPDFFTMGSRSAHRMVDAP-TSLSRFSKVDGGTGFDDGPGLDLHLSLAPA 218
            S         F  +G++  H     P  S++ FS+ + GT FDDG GLDLHLSLAPA
Sbjct: 187 FSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLSLAPA 242

[Close]

BLAST of CcUC01G006110 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 84/218 (38.53%), Postives = 101/218 (46.33%), Query Frame = 0


Query: 19  TTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAGPSSGDRKYECQYCYREFAN 78
           T+ LKLFG ++   LE  S    S+    G G G         S  RKYECQYC REFAN
Sbjct: 5   TSSLKLFGINL---LETTSVQNQSSEPRPGSGSG---------SESRKYECQYCCREFAN 64

Query: 79  SQALGGHQNAHKKERQQLKRAQLQASR------NAAVFRNPIVSAFAPPPHLLPSAAVTS 138
           SQALGGHQNAHKKERQ LKRAQ+ A+R      N     NP++SAFAP PHLL       
Sbjct: 65  SQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQ----- 124

Query: 139 SSSWPVYIPRAPPQFQVSHGCVFTPSSYADAPPPPSPPDFFTMG--------SRSAHRMV 198
                   P  PP   +S     +   Y +     +   +F  G           A  + 
Sbjct: 125 --------PHPPPHMMLSPSSSSSKWLYGEHMSSQNAVGYFHGGRGLYGGGMESMAGEVK 184

Query: 199 DAPTSLSRFSKVDG------GTGFDDGPGLDLHLSLAP 217
               SL    +  G      G   ++G GLDLHLSL P
Sbjct: 185 THGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP 197

[Close]

BLAST of CcUC01G006110 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-11
Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 0


Query: 11  KQNNNNNPTTRLKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAGPSSGDRKYECQ 70
           + ++ ++    +KLFGF++          T  + S S      T          +++ECQ
Sbjct: 12  ESSSGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVM--------KRHECQ 71

Query: 71  YCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVF-----RNPIVSAF 119
           YC +EFANSQALGGHQNAHKKER + KR QLQA R +  +     + PI ++F
Sbjct: 72  YCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSF 116

[Close]

BLAST of CcUC01G006110 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 5.8e-09
Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 8   YQTKQNNNNNPTTR-LKLFGFDVQEDLEDDSAPTPSASSDSGGGLGPTAAAAGPSSGDRK 67
           Y     N+ +P  R ++LFGF+     E+         S+S         +    + +++
Sbjct: 4   YDFMNVNSFSPKERPIRLFGFEFGASHEE---------SESKDNYNENNESIKDDNKEKR 63

Query: 68  YECQYCYREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVF 111
           ++C YC+R F  SQALGGHQNAHK+ERQQ KR  L +  NAA F
Sbjct: 64  FKCHYCFRNFPTSQALGGHQNAHKRERQQTKRFNLHS--NAAAF 96

[Close]

BLAST of CcUC01G006110 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 )

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-09
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 61  SSGDRKYECQYCYREFANSQALGGHQNAHKKERQQLKRAQL 102
           ++ +R++EC YC+R F  SQALGGHQNAHK+ERQ  KR  +
Sbjct: 89  NNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSM 129

The following BLAST results are available for this feature:

BLAST of CcUC01G006110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875418.1	7.4e-107	92.79	zinc finger protein GIS3-like [Benincasa hispida]	[more]
TYK00272.1	6.3e-98	87.11	zinc finger protein 6-like [Cucumis melo var. makuwa]	[more]
XP_008467196.1	6.3e-98	87.11	PREDICTED: zinc finger protein 6-like [Cucumis melo]	[more]
NP_001295848.1	1.8e-97	86.61	zinc finger protein 6-like [Cucumis sativus] >AIS39467.1 multicellular trichome ...	[more]
XP_022939421.1	3.2e-86	80.00	zinc finger protein GIS3-like [Cucurbita moschata]	[more]

BLAST of CcUC01G006110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9H1	2.5e-41	50.00	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39265	1.4e-20	38.53	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q39264	6.7e-10	38.05	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9FG05	8.2e-08	37.50	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
P93751	1.4e-07	58.54	Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1	[more]

BLAST of CcUC01G006110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BNG5	3.0e-98	87.11	Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CSY8	3.0e-98	87.11	zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103504603 PE=4 SV=1	[more]
A0A0A0KRQ5	8.8e-98	86.61	Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucu...	[more]
A0A6J1FFV2	1.6e-86	80.00	zinc finger protein GIS3-like OS=Cucurbita moschata OX=3662 GN=LOC111445339 PE=4...	[more]
A0A6J1JUL8	3.9e-85	79.00	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111489855 PE=4 S...	[more]

BLAST of CcUC01G006110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68360.1	1.8e-42	50.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G67030.1	1.0e-21	38.53	zinc finger protein 6	[more]
AT1G10480.1	4.8e-11	38.05	zinc finger protein 5	[more]
AT5G06650.1	5.8e-09	37.50	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G41940.1	9.9e-09	58.54	zinc finger protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 53..112 e-value: 1.1E-8 score: 36.8
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 67..92 e-value: 1.4E-5 score: 25.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	PANTHER	PTHR46353:SF9	ZINC FINGER PROTEIN GIS3	coord: 12..219
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 12..219
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 69..89
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 67..94 score: 11.676262
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 63..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G006110.1	CcUC01G006110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding