CcUC01G005890 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G005890
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	F-box protein PP2-A13-like
Location	CicolChr01: 5914242 .. 5919380 (+)
RNA-Seq Expression	CcUC01G005890
Synteny	CcUC01G005890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGGGGAAAAAAAAGTATTCCATGCACTTTCACGTAGACGAACCCATTTTTATACATTATTTTCTTTCCCCCTCAATTGAATTTCATTTCTAAAAAACCCCTCCACTTTTTTAACATTCCCTCTTTTTCCCCAAACTTTCCCCCAAAAAGGAAAAAACATGCCCATTATTCTTCATCATCTCCCACTTTCTATCTCCCACCTCCCTCTCTACCATTACAAACACAACACACCCATCTAATTTCGCCCCCCTCTCTCTCCAAATCCAAAAAAAAAAAAAAAAAAAAAAAAACTTCCTCTTTTATGGGGGCTTCCTTTGCCAAACACTCCAATCTCCCTTCCTCTCCTTCCTCCTCCGATTCCTCTTCTCTCGAAGACATACCGGAAAATTGTATTTCCATTGTCTTCAAGTACTTGGATCCTCCCGAGATTTGCAATCTTGCCTCTCTCAATCGAGCCTTTCGTGCTGCTTCTTCCGCTGATTTCGTTTGGGAATCCAAACTCCCTTCCAATTACAACTTCTTACTTCATCGAGTTCTTCATCCTCAATTGTGCCAGCCTAAGAAACACATCTTCGCTACCCTCACTCGCCCTTATCTCTTTGATCATGCCACCAAGGTAATTATATATATCTTGTCTTATGGACATTCAAACTTCTAATTTTTTATTAAATAAAATTAAAACAATAGATTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAATTATTTTTCTTTTTCTTTTTTCCCCTCCACAGATGCTGATGGGTCTTTTCGAAAAATATAATGGAAGAAAGATGGTGGATAATTATCTTTGGAAAAGTATTTTTCTTTTTTCTTTTGAAAGAAAATATTTATTCAAATCTTCTTTCATAAATTTTAATTAAGTTTTGCTTATTTTCCATTATGATATCAGAAGTTTTAAATTTTAGATTTTTGTGAATCTTTTTATTCCATTTTCCTCAATTTTTTTTTTTTTTTAAAAATTTGGTTTAAATCTTATTAACTTTTTCCATTTTAATCTCTATTTTTTTTAATCTTTGAAAAAAATATTATTATGAAAGTTAATTATTTTATTCGGTTCAAATCCATTTATGAGCCGATAAGATATACCTAATTTGTTTATATTTAGGCTTTTCTTTTTGGAGAATTTTTCATATTTGGCTTCAAATACTAGTTTAGGTAGGGATTGATTGAACATATATTATGTTTTTGTCAATTAATTTGTTAAAGTATTATTATCGAAGACTAAAGTTTTAATACCTGTCTTTGTCTCAATTCCAAAAATTATAAGATAAAATACGTCTAATAATATTCTCGTTTCTCAATTTTTTCCTCGTTTTTATTAATAAAAACTATCTAAAAGTAAATACATGTCTAGTAATTATTTCTTCTTTTTCTTTTTTTTTTTTCTAAACAAGAATTAATTTAGAAATCCGTTTAGTAATTATTTTTTGTTTTTTAATTGAAATAAAAACTTCAAAAGAAAAAATACGATTTTTTTTTTTTTAAAAAAAGAAAATAGTATTTGTGTCATTTTAAAAAAAGGTTAATTGCCAATTTAGTTCTTATAGTTTCGAAAAAGTTACAATTTAGTCCCTATGATTTATAATTATAATTTAGTCATTAGAATTTTATTAGACGTCAGGGACTATTTAATCAAATAATAAAGAATCAAATTCTAACTTTTAAAACCATAAAAACTAAATCCTAACTTTCTTTTAAACTATAAAAGACTAAATTTGTAATTTAACCAAAAAGAAAAAAAAGCCATTTATCTCTTAAAACCTCTAATTTGAAAAGTGGATATGCAAATGGATAATAAATTATTGGATAATAAATTATTTCACTTCGATATCGAGAAGTCAAAACTTTGAATTTCCATTTTCACCTCTCATTAAATGACAAGAAATCTGAACCTAGAAGGTTAGAAAGAATATTGGATTTGAAATGAAGAGTTGGTGGTAATTGACAGGTTTGGGACAGTGGCATATTTGAAACAAATATGGTGGGTTGAAATAGGAGGAGAATTGGAGTTTGAGTTACCTAAGGGAAGCTACAGTGTATATTTCAGGCTTCAATTGGGGAAAGCTTCAAAGAAATTTGGAAGAAGATTTGTAGATGTGGATCAAGTTCATGGATGGGAACTTAAGCCAGTGAGATTTGAAGTCTCAGTTTCCAATGCCCAAAAAGCTTCATCTGAGTGTTATTTAAACCAATTTGGGAAATGGGTTTTGTACAAAGTGGGAGATTTTAGTGTTGAAACCCCTAATTTTGTAGCTCATATCAAATTTTCAATGATTCAAATTGATTGTACTCATACTAAAGGTGGCCTTTCTGTGGACTCTGTCTTCATTTCTCCCACTGATTTTAAGCCCACCTTCAAATGATATCACTCTAGCTAGGGATTATAATATTGGGG

mRNA sequence

AAAAAGGGGAAAAAAAAGTATTCCATGCACTTTCACGTAGACGAACCCATTTTTATACATTATTTTCTTTCCCCCTCAATTGAATTTCATTTCTAAAAAACCCCTCCACTTTTTTAACATTCCCTCTTTTTCCCCAAACTTTCCCCCAAAAAGGAAAAAACATGCCCATTATTCTTCATCATCTCCCACTTTCTATCTCCCACCTCCCTCTCTACCATTACAAACACAACACACCCATCTAATTTCGCCCCCCTCTCTCTCCAAATCCAAAAAAAAAAAAAAAAAAAAAAAAACTTCCTCTTTTATGGGGGCTTCCTTTGCCAAACACTCCAATCTCCCTTCCTCTCCTTCCTCCTCCGATTCCTCTTCTCTCGAAGACATACCGGAAAATTGTATTTCCATTGTCTTCAAGTACTTGGATCCTCCCGAGATTTGCAATCTTGCCTCTCTCAATCGAGCCTTTCGTGCTGCTTCTTCCGCTGATTTCGTTTGGGAATCCAAACTCCCTTCCAATTACAACTTCTTACTTCATCGAGTTCTTCATCCTCAATTGTGCCAGCCTAAGAAACACATCTTCGCTACCCTCACTCGCCCTTATCTCTTTGATCATGCCACCAAGGTTTGGGACAGTGGCATATTTGAAACAAATATGGTGGGTTGAAATAGGAGGAGAATTGGAGTTTGAGTTACCTAAGGGAAGCTACAGTGTATATTTCAGGCTTCAATTGGGGAAAGCTTCAAAGAAATTTGGAAGAAGATTTGTAGATGTGGATCAAGTTCATGGATGGGAACTTAAGCCAGTGAGATTTGAAGTCTCAGTTTCCAATGCCCAAAAAGCTTCATCTGAGTGTTATTTAAACCAATTTGGGAAATGGGTTTTGTACAAAGTGGGAGATTTTAGTGTTGAAACCCCTAATTTTGTAGCTCATATCAAATTTTCAATGATTCAAATTGATTGTACTCATACTAAAGGTGGCCTTTCTGTGGACTCTGTCTTCATTTCTCCCACTGATTTTAAGCCCACCTTCAAATGATATCACTCTAGCTAGGGATTATAATATTGGGG

Coding sequence (CDS)

ATGCCACCAAGGTTTGGGACAGTGGCATATTTGAAACAAATATGGTGGGTTGAAATAGGAGGAGAATTGGAGTTTGAGTTACCTAAGGGAAGCTACAGTGTATATTTCAGGCTTCAATTGGGGAAAGCTTCAAAGAAATTTGGAAGAAGATTTGTAGATGTGGATCAAGTTCATGGATGGGAACTTAAGCCAGTGAGATTTGAAGTCTCAGTTTCCAATGCCCAAAAAGCTTCATCTGAGTGTTATTTAAACCAATTTGGGAAATGGGTTTTGTACAAAGTGGGAGATTTTAGTGTTGAAACCCCTAATTTTGTAGCTCATATCAAATTTTCAATGATTCAAATTGATTGTACTCATACTAAAGGTGGCCTTTCTGTGGACTCTGTCTTCATTTCTCCCACTGATTTTAAGCCCACCTTCAAATGA

Protein sequence

MPPRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELKPVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKGGLSVDSVFISPTDFKPTFK

Homology

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BLAST of CcUC01G005890 vs. NCBI nr
Match: XP_038906479.1 (F-box protein PP2-A14 isoform X1 [Benincasa hispida])

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 128/139 (92.09%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RFG+VAYLKQIWWVEIGGELEFELPKG+YSVYFRLQLGK SKKFGRRFVD+DQVHGWELK
Sbjct: 142 RFGSVAYLKQIWWVEIGGELEFELPKGNYSVYFRLQLGKPSKKFGRRFVDIDQVHGWELK 201

Query: 64  PVRFEVSVS-NAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKG 123
           PVRFEVS+S NAQKASSECYLNQFGKWVLYKVGDFS+ET NFVA IKFSMIQIDCTHTKG
Sbjct: 202 PVRFEVSISNNAQKASSECYLNQFGKWVLYKVGDFSIETHNFVAQIKFSMIQIDCTHTKG 261

Query: 124 GLSVDSVFISPTDFKPTFK 142
           GLSVDSVFI P DFKPTFK
Sbjct: 262 GLSVDSVFICPNDFKPTFK 280

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BLAST of CcUC01G005890 vs. NCBI nr
Match: XP_004143628.1 (F-box protein PP2-A14 [Cucumis sativus] >KGN50425.1 hypothetical protein Csa_000549 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 2.0e-65
Identity = 120/143 (83.92%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           R+G+VAYLKQIWWVEIGGE+EFELPKG YSVYFR+QLGK+SKKFGRRF+DVD+VHGWELK
Sbjct: 146 RYGSVAYLKQIWWVEIGGEMEFELPKGKYSVYFRVQLGKSSKKFGRRFIDVDEVHGWELK 205

Query: 64  PVRFEVSVS-----NAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCT 123
           PVRFE+SVS     N QK SSE YLNQFGKWVLYKVGDF +E+PNFVA IKFSMIQIDCT
Sbjct: 206 PVRFELSVSNNNNKNGQKVSSEFYLNQFGKWVLYKVGDFCIESPNFVAQIKFSMIQIDCT 265

Query: 124 HTKGGLSVDSVFISPTDFKPTFK 142
           HTKGGLSVDSVFI P DFKPTFK
Sbjct: 266 HTKGGLSVDSVFICPNDFKPTFK 288

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BLAST of CcUC01G005890 vs. NCBI nr
Match: XP_008467221.1 (PREDICTED: LOW QUALITY PROTEIN: F-box protein PP2-A14 [Cucumis melo])

HSP 1 Score: 251.9 bits (642), Expect = 3.2e-63
Identity = 118/142 (83.10%), Postives = 127/142 (89.44%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           R+G+VAYLKQIWWVEIGGELEFELPKG YSVYFR+QLGK+SKKFGRRF+DV +VHGWELK
Sbjct: 147 RYGSVAYLKQIWWVEIGGELEFELPKGKYSVYFRVQLGKSSKKFGRRFIDVGEVHGWELK 206

Query: 64  PVRFEVSVS-----NAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCT 123
           PVRFE+SVS     N QK SSE YLNQFGKWVLYKVGDF +E+PNFVA IKFSMIQIDCT
Sbjct: 207 PVRFELSVSNNNNKNGQKVSSEFYLNQFGKWVLYKVGDFCIESPNFVAQIKFSMIQIDCT 266

Query: 124 HTKGGLSVDSVFISPTDFKPTF 141
           HTKGGLSVDSVFI P  FKPTF
Sbjct: 267 HTKGGLSVDSVFICPHHFKPTF 288

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BLAST of CcUC01G005890 vs. NCBI nr
Match: XP_022995451.1 (F-box protein PP2-A13-like [Cucurbita maxima])

HSP 1 Score: 221.5 bits (563), Expect = 4.7e-54
Identity = 100/134 (74.63%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF +VAYLKQIWWVEI GELE E PKG+YS+YFRLQLGK SKKFGRR  +V QVHGWE+K
Sbjct: 148 RFESVAYLKQIWWVEIRGELELEFPKGNYSLYFRLQLGKPSKKFGRRVTEVGQVHGWEIK 207

Query: 64  PVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKGG 123
           PVRFE++ SNAQKASSECYL   G WVL+ VGDF V+ PN   HIKFS+IQIDCTHTKGG
Sbjct: 208 PVRFEMTASNAQKASSECYLRHSGNWVLHHVGDFCVQNPNLQTHIKFSLIQIDCTHTKGG 267

Query: 124 LSVDSVFISPTDFK 138
           L VDSVFI P++F+
Sbjct: 268 LCVDSVFICPSEFE 281

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BLAST of CcUC01G005890 vs. NCBI nr
Match: KAG6605702.1 (F-box protein PP2-A13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 220.7 bits (561), Expect = 8.0e-54
Identity = 100/134 (74.63%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF +VAYLKQIWWVEI GELE E PKG+YS+YFRLQLGK SKKFGRR  +V QVHGWE+K
Sbjct: 148 RFESVAYLKQIWWVEIRGELELEFPKGNYSLYFRLQLGKPSKKFGRRVTEVGQVHGWEIK 207

Query: 64  PVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKGG 123
           PVRFE++ SNAQKASSECYL   G WVL+ VGDF V+ PN   HIKFS+IQIDCTHTKGG
Sbjct: 208 PVRFEMTASNAQKASSECYLRHSGNWVLHHVGDFCVQNPNLQTHIKFSLIQIDCTHTKGG 267

Query: 124 LSVDSVFISPTDFK 138
           L VDSVFI P+ F+
Sbjct: 268 LCVDSVFICPSQFE 281

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BLAST of CcUC01G005890 vs. ExPASy Swiss-Prot
Match: Q9LEX0 (F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3702 GN=PP2A13 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.6e-41
Identity = 74/133 (55.64%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF + AY++QIWW E+GGE E + P G+YS++FR+QLGK SK+ GRR  + + +HGW++K
Sbjct: 149 RFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHGWDIK 208

Query: 64  PVRFEVSVSNAQKASSECYLNQF-GKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKG 123
           PVRF+++ S+ Q+A S CYLN   G W  Y VGDF V  P+    IKFSM QIDCTHTKG
Sbjct: 209 PVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCTHTKG 268

Query: 124 GLSVDSVFISPTD 136
           GL +DSV I P +
Sbjct: 269 GLCIDSVLILPKE 281

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BLAST of CcUC01G005890 vs. ExPASy Swiss-Prot
Match: Q9CAN4 (F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3702 GN=PP2A11 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-41
Identity = 75/135 (55.56%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF +VAY++QIWW ++ GE++F  P G+YSVYFRLQLGK  K+FG + VD +QVHGW +K
Sbjct: 149 RFASVAYVQQIWWFQVDGEIDFPFPAGTYSVYFRLQLGKPGKRFGWKVVDTEQVHGWNIK 208

Query: 64  PVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSV-ETPNFVAHIKFSMIQIDCTHTKG 123
           PVRF++S  + Q +SS+C L + G W  Y  GDF V ++ +    IKFSM QIDCTHTKG
Sbjct: 209 PVRFQLSTEDGQHSSSQCMLTEAGNWSHYHAGDFVVGKSKSSSTKIKFSMTQIDCTHTKG 268

Query: 124 GLSVDSVFISPTDFK 138
           GL VDSV + P+  K
Sbjct: 269 GLCVDSVVVYPSSCK 283

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BLAST of CcUC01G005890 vs. ExPASy Swiss-Prot
Match: Q9FJ80 (F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-40
Identity = 71/138 (51.45%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RFG++ YL+QIWW+E  G++ FE   G YS+ F++QLGK  +K GR+   +DQVHGW++K
Sbjct: 151 RFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTCSLDQVHGWDIK 210

Query: 64  PVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKGG 123
           PVRF++S S+ Q A SE +L++ G+WV +  GDF VE  N    +KFSM+QIDCTHTKGG
Sbjct: 211 PVRFQLSTSDGQCAMSERHLDESGRWVYHHAGDFVVENQNSPVWVKFSMLQIDCTHTKGG 270

Query: 124 LSVDSVFISPTDFKPTFK 142
           L +D V I P +++  +K
Sbjct: 271 LCLDCVIICPFEYRGKYK 288

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BLAST of CcUC01G005890 vs. ExPASy Swiss-Prot
Match: Q9LN77 (F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3702 GN=P2A12 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.4e-40
Identity = 74/139 (53.24%), Postives = 99/139 (71.22%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF +VAYL+QIWW E+ GE++F  P G+YS++FRLQLG++ K FGRR  + +QVHGW++K
Sbjct: 151 RFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVHGWDIK 210

Query: 64  PVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSV-ETPNFVAHIKFSMIQIDCTHTKG 123
           PVRF++   + Q +SS+C L + G W+ Y  GD  V E+      IKFSM QIDCTHTKG
Sbjct: 211 PVRFQLWTEDGQYSSSQCMLTERGNWIHYHAGDVVVRESNRSSTKIKFSMTQIDCTHTKG 270

Query: 124 GLSVDSVFISPTDFKPTFK 142
           GLS+DSV + P+  K   K
Sbjct: 271 GLSLDSVVVYPSSCKDQLK 289

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BLAST of CcUC01G005890 vs. ExPASy Swiss-Prot
Match: Q9LF92 (F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.6e-35
Identity = 70/141 (49.65%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF  VAYL+QIWW E+ G + F LP G YS+ FR+ LG+ +K+ GRR    +  HGW+LK
Sbjct: 144 RFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHFELTHGWDLK 203

Query: 64  PVRFEVSVSNAQKASSECYLNQF-----------GKWVLYKVGDFSVETPNFVAHIKFSM 123
           PVRF +S S+ Q+AS E YL+             G W+ Y+VG+F V        I++SM
Sbjct: 204 PVRFSLSTSDGQEASCEYYLDDVERNEALGKHKRGYWIEYRVGEFIVNGSEPSTEIQWSM 263

Query: 124 IQIDCTHTKGGLSVDSVFISP 134
            QIDCTH+KGGL VDSVFI+P
Sbjct: 264 KQIDCTHSKGGLCVDSVFINP 284

[Close]

BLAST of CcUC01G005890 vs. ExPASy TrEMBL
Match: A0A0A0KL73 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G173520 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 9.8e-66
Identity = 120/143 (83.92%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           R+G+VAYLKQIWWVEIGGE+EFELPKG YSVYFR+QLGK+SKKFGRRF+DVD+VHGWELK
Sbjct: 146 RYGSVAYLKQIWWVEIGGEMEFELPKGKYSVYFRVQLGKSSKKFGRRFIDVDEVHGWELK 205

Query: 64  PVRFEVSVS-----NAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCT 123
           PVRFE+SVS     N QK SSE YLNQFGKWVLYKVGDF +E+PNFVA IKFSMIQIDCT
Sbjct: 206 PVRFELSVSNNNNKNGQKVSSEFYLNQFGKWVLYKVGDFCIESPNFVAQIKFSMIQIDCT 265

Query: 124 HTKGGLSVDSVFISPTDFKPTFK 142
           HTKGGLSVDSVFI P DFKPTFK
Sbjct: 266 HTKGGLSVDSVFICPNDFKPTFK 288

[Close]

BLAST of CcUC01G005890 vs. ExPASy TrEMBL
Match: A0A1S3CUB8 (LOW QUALITY PROTEIN: F-box protein PP2-A14 OS=Cucumis melo OX=3656 GN=LOC103504624 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.6e-63
Identity = 118/142 (83.10%), Postives = 127/142 (89.44%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           R+G+VAYLKQIWWVEIGGELEFELPKG YSVYFR+QLGK+SKKFGRRF+DV +VHGWELK
Sbjct: 147 RYGSVAYLKQIWWVEIGGELEFELPKGKYSVYFRVQLGKSSKKFGRRFIDVGEVHGWELK 206

Query: 64  PVRFEVSVS-----NAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCT 123
           PVRFE+SVS     N QK SSE YLNQFGKWVLYKVGDF +E+PNFVA IKFSMIQIDCT
Sbjct: 207 PVRFELSVSNNNNKNGQKVSSEFYLNQFGKWVLYKVGDFCIESPNFVAQIKFSMIQIDCT 266

Query: 124 HTKGGLSVDSVFISPTDFKPTF 141
           HTKGGLSVDSVFI P  FKPTF
Sbjct: 267 HTKGGLSVDSVFICPHHFKPTF 288

[Close]

BLAST of CcUC01G005890 vs. ExPASy TrEMBL
Match: A0A6J1K1Y6 (F-box protein PP2-A13-like OS=Cucurbita maxima OX=3661 GN=LOC111490982 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.3e-54
Identity = 100/134 (74.63%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF +VAYLKQIWWVEI GELE E PKG+YS+YFRLQLGK SKKFGRR  +V QVHGWE+K
Sbjct: 148 RFESVAYLKQIWWVEIRGELELEFPKGNYSLYFRLQLGKPSKKFGRRVTEVGQVHGWEIK 207

Query: 64  PVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKGG 123
           PVRFE++ SNAQKASSECYL   G WVL+ VGDF V+ PN   HIKFS+IQIDCTHTKGG
Sbjct: 208 PVRFEMTASNAQKASSECYLRHSGNWVLHHVGDFCVQNPNLQTHIKFSLIQIDCTHTKGG 267

Query: 124 LSVDSVFISPTDFK 138
           L VDSVFI P++F+
Sbjct: 268 LCVDSVFICPSEFE 281

[Close]

BLAST of CcUC01G005890 vs. ExPASy TrEMBL
Match: A0A6J1H031 (F-box protein PP2-A13-like OS=Cucurbita moschata OX=3662 GN=LOC111459221 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.9e-54
Identity = 100/134 (74.63%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF +VAYLKQIWWVEI GELE E PKG+YS+YFRLQLGK SKKFGRR  +V QVHGWE+K
Sbjct: 148 RFESVAYLKQIWWVEIRGELELEFPKGNYSLYFRLQLGKPSKKFGRRVTEVGQVHGWEIK 207

Query: 64  PVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKGG 123
           PVRFE++ SNAQKASSECYL   G WVL+ VGDF V+ PN   HIKFS+IQIDCTHTKGG
Sbjct: 208 PVRFEMTASNAQKASSECYLRHSGNWVLHHVGDFCVQNPNLQTHIKFSLIQIDCTHTKGG 267

Query: 124 LSVDSVFISPTDFK 138
           L VDSVFI P+ F+
Sbjct: 268 LCVDSVFICPSQFE 281

[Close]

BLAST of CcUC01G005890 vs. ExPASy TrEMBL
Match: A0A6J1DZW7 (F-box protein PP2-A13-like OS=Momordica charantia OX=3673 GN=LOC111025061 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.6e-54
Identity = 99/138 (71.74%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKAS-KKFGRRFVDVDQVHGWEL 63
           RFG+VAYLKQIWWVEIGGE+EFE P G YS+YFRL LGK S  KFGRR  D++ VHGW+L
Sbjct: 316 RFGSVAYLKQIWWVEIGGEVEFEFPPGGYSLYFRLHLGKPSPNKFGRRTADMEHVHGWDL 375

Query: 64  KPVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKG 123
           KPV F++SVS+  KA+SECYL Q G WV Y VGDF VE PNF AHI FSM+QIDCTHTKG
Sbjct: 376 KPVSFQLSVSSGHKATSECYLQQSGSWVFYHVGDFGVEAPNFTAHINFSMLQIDCTHTKG 435

Query: 124 GLSVDSVFISPTDFKPTF 141
           GLSVDSVFI P++FK  +
Sbjct: 436 GLSVDSVFICPSEFKSLY 453

[Close]

BLAST of CcUC01G005890 vs. TAIR 10
Match: AT3G61060.2 (phloem protein 2-A13 )

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-42
Identity = 74/133 (55.64%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF + AY++QIWW E+GGE E + P G+YS++FR+QLGK SK+ GRR  + + +HGW++K
Sbjct: 150 RFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHGWDIK 209

Query: 64  PVRFEVSVSNAQKASSECYLNQF-GKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKG 123
           PVRF+++ S+ Q+A S CYLN   G W  Y VGDF V  P+    IKFSM QIDCTHTKG
Sbjct: 210 PVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCTHTKG 269

Query: 124 GLSVDSVFISPTD 136
           GL +DSV I P +
Sbjct: 270 GLCIDSVLILPKE 282

[Close]

BLAST of CcUC01G005890 vs. TAIR 10
Match: AT3G61060.1 (phloem protein 2-A13 )

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-42
Identity = 74/133 (55.64%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF + AY++QIWW E+GGE E + P G+YS++FR+QLGK SK+ GRR  + + +HGW++K
Sbjct: 149 RFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHGWDIK 208

Query: 64  PVRFEVSVSNAQKASSECYLNQF-GKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKG 123
           PVRF+++ S+ Q+A S CYLN   G W  Y VGDF V  P+    IKFSM QIDCTHTKG
Sbjct: 209 PVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCTHTKG 268

Query: 124 GLSVDSVFISPTD 136
           GL +DSV I P +
Sbjct: 269 GLCIDSVLILPKE 281

[Close]

BLAST of CcUC01G005890 vs. TAIR 10
Match: AT1G63090.1 (phloem protein 2-A11 )

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-42
Identity = 75/135 (55.56%), Postives = 98/135 (72.59%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF +VAY++QIWW ++ GE++F  P G+YSVYFRLQLGK  K+FG + VD +QVHGW +K
Sbjct: 149 RFASVAYVQQIWWFQVDGEIDFPFPAGTYSVYFRLQLGKPGKRFGWKVVDTEQVHGWNIK 208

Query: 64  PVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSV-ETPNFVAHIKFSMIQIDCTHTKG 123
           PVRF++S  + Q +SS+C L + G W  Y  GDF V ++ +    IKFSM QIDCTHTKG
Sbjct: 209 PVRFQLSTEDGQHSSSQCMLTEAGNWSHYHAGDFVVGKSKSSSTKIKFSMTQIDCTHTKG 268

Query: 124 GLSVDSVFISPTDFK 138
           GL VDSV + P+  K
Sbjct: 269 GLCVDSVVVYPSSCK 283

[Close]

BLAST of CcUC01G005890 vs. TAIR 10
Match: AT5G52120.1 (phloem protein 2-A14 )

HSP 1 Score: 167.5 bits (423), Expect = 7.5e-42
Identity = 71/138 (51.45%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RFG++ YL+QIWW+E  G++ FE   G YS+ F++QLGK  +K GR+   +DQVHGW++K
Sbjct: 151 RFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTCSLDQVHGWDIK 210

Query: 64  PVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKGG 123
           PVRF++S S+ Q A SE +L++ G+WV +  GDF VE  N    +KFSM+QIDCTHTKGG
Sbjct: 211 PVRFQLSTSDGQCAMSERHLDESGRWVYHHAGDFVVENQNSPVWVKFSMLQIDCTHTKGG 270

Query: 124 LSVDSVFISPTDFKPTFK 142
           L +D V I P +++  +K
Sbjct: 271 LCLDCVIICPFEYRGKYK 288

[Close]

BLAST of CcUC01G005890 vs. TAIR 10
Match: AT1G12710.1 (phloem protein 2-A12 )

HSP 1 Score: 167.2 bits (422), Expect = 9.8e-42
Identity = 74/139 (53.24%), Postives = 99/139 (71.22%), Query Frame = 0


Query: 4   RFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELK 63
           RF +VAYL+QIWW E+ GE++F  P G+YS++FRLQLG++ K FGRR  + +QVHGW++K
Sbjct: 151 RFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVHGWDIK 210

Query: 64  PVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSV-ETPNFVAHIKFSMIQIDCTHTKG 123
           PVRF++   + Q +SS+C L + G W+ Y  GD  V E+      IKFSM QIDCTHTKG
Sbjct: 211 PVRFQLWTEDGQYSSSQCMLTERGNWIHYHAGDVVVRESNRSSTKIKFSMTQIDCTHTKG 270

Query: 124 GLSVDSVFISPTDFKPTFK 142
           GLS+DSV + P+  K   K
Sbjct: 271 GLSLDSVVVYPSSCKDQLK 289

The following BLAST results are available for this feature:

BLAST of CcUC01G005890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906479.1	1.8e-69	92.09	F-box protein PP2-A14 isoform X1 [Benincasa hispida]	[more]
XP_004143628.1	2.0e-65	83.92	F-box protein PP2-A14 [Cucumis sativus] >KGN50425.1 hypothetical protein Csa_000...	[more]
XP_008467221.1	3.2e-63	83.10	PREDICTED: LOW QUALITY PROTEIN: F-box protein PP2-A14 [Cucumis melo]	[more]
XP_022995451.1	4.7e-54	74.63	F-box protein PP2-A13-like [Cucurbita maxima]	[more]
KAG6605702.1	8.0e-54	74.63	F-box protein PP2-A13, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CcUC01G005890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEX0	1.6e-41	55.64	F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3702 GN=PP2A13 PE=1 SV=1	[more]
Q9CAN4	2.1e-41	55.56	F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3702 GN=PP2A11 PE=1 SV=1	[more]
Q9FJ80	1.1e-40	51.45	F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1	[more]
Q9LN77	1.4e-40	53.24	F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3702 GN=P2A12 PE=2 SV=1	[more]
Q9LF92	8.6e-35	49.65	F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1	[more]

BLAST of CcUC01G005890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL73	9.8e-66	83.92	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G173520 PE=4 ...	[more]
A0A1S3CUB8	1.6e-63	83.10	LOW QUALITY PROTEIN: F-box protein PP2-A14 OS=Cucumis melo OX=3656 GN=LOC1035046...	[more]
A0A6J1K1Y6	2.3e-54	74.63	F-box protein PP2-A13-like OS=Cucurbita maxima OX=3661 GN=LOC111490982 PE=4 SV=1	[more]
A0A6J1H031	3.9e-54	74.63	F-box protein PP2-A13-like OS=Cucurbita moschata OX=3662 GN=LOC111459221 PE=4 SV...	[more]
A0A6J1DZW7	6.6e-54	71.74	F-box protein PP2-A13-like OS=Momordica charantia OX=3673 GN=LOC111025061 PE=4 S...	[more]

BLAST of CcUC01G005890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61060.2	1.2e-42	55.64	phloem protein 2-A13	[more]
AT3G61060.1	1.2e-42	55.64	phloem protein 2-A13	[more]
AT1G63090.1	1.5e-42	55.56	phloem protein 2-A11	[more]
AT5G52120.1	7.5e-42	51.45	phloem protein 2-A14	[more]
AT1G12710.1	9.8e-42	53.24	phloem protein 2-A12	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 4..133 e-value: 6.9E-26 score: 91.1
None	No IPR available	PANTHER	PTHR31960:SF18	F-BOX PROTEIN PP2-A14	coord: 4..139
None	No IPR available	PANTHER	PTHR31960	F-BOX PROTEIN PP2-A15	coord: 4..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G005890.1	CcUC01G005890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009611	response to wounding