CcUC01G005810 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G005810
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr01: 5847215 .. 5848132 (+)
RNA-Seq Expression	CcUC01G005810
Synteny	CcUC01G005810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTTGCAGACTAGCAAGGAGAGGCTGAATGGGCCAACCATGGTGGTGGGCGAAGGCGGTGATGTCTAGAGACAAATCAGTGACTAGATTTGAATGCGGATGGTTTTAAGATGAAGTCATGATTTGTAGAGCTGCATGTCTTCACCGTATCTTCGATCACCAACCACGTCACTCGCCGATCGCCAGTAAATTCCTCTACGATTTTCTCTCTCTCCTCTCCGTGCGGCAGCCCCTCCCCTTTCCAACTTAAGGTGATACATAGAGGAGCTTAACTAAATGAAGATCTATTTAATTACAAAATTTCCATAAATCTTAAATAACTAGTCATTTTCAACCATGTACCAATAGTATATCAAGTGTGTATCAACAATGTATCAAATGTATTAGGTGTGTGCTAGTAGTGTATCAAGTATACCAAGTATCAAGTGTATCATGTGAGTTGGACTTGTTTTGTTGCCATTTATACAAAAAATAATAAATTTTAGCTATAAATCTAAATTTTTTAGATTTATTTTGCCAAATCTTCAGTAACCCCTAAGTATTGACTACAATTTTCTTTTTTATATATAAAAAAAAAATGATGTCAATGAGGGATAAATCTACCTGTTAAAAATTTCTCCCAAAAAAGTAAAAATAAAAAATCTACTTAAAATGAAAAATTTAGATGTAATTAGATCTAATTTATTTAGGCTATGTATAGAAAGTCTCAAAAAATAAAACCATTTCTTCTTCGCTTCCCTCTCCTGTCTTCCCGCAAGCCACCGGCGACCTCCACGTTTCTCCAGCGCCAGTCGCCACCTCCACGATCTCCTCAGCTCCAGCTGCACTTCCGCATCGGCAGCACTGACCCCACCCACTGCCAGTCGCCAGTCGCCGACTCGCCACCTCCAGCGGCAGCGCACTCCATGGTTTGA

mRNA sequence

ATGACGACTAGCAAGGAGAGGCTGAATGGGCCAACCATGGTGGTGGGCGAAGGCGAGCTGCATGTCTTCACCGTATCTTCGATCACCAACCACGTCACTCGCCGATCGCCAGTAAATTCCTCTACGATTTTCTCTCTCTCCTCTCCGTGCGGCAGCCCCTCCCCTTTCCAACTTAAGGCTATGTATAGAAAGTCTCAAAAAATAAAACCATTTCTTCTTCGCTTCCCTCTCCTGTCTTCCCGCAAGCCACCGGCGACCTCCACGTTTCTCCAGCGCCAGTCGCCACCTCCACGATCTCCTCAGCTCCAGCTGCACTTCCGCATCGGCAGCACTGACCCCACCCACTGCCAGTCGCCAGTCGCCGACTCGCCACCTCCAGCGGCAGCGCACTCCATGGTTTGA

Coding sequence (CDS)

ATGACGACTAGCAAGGAGAGGCTGAATGGGCCAACCATGGTGGTGGGCGAAGGCGAGCTGCATGTCTTCACCGTATCTTCGATCACCAACCACGTCACTCGCCGATCGCCAGTAAATTCCTCTACGATTTTCTCTCTCTCCTCTCCGTGCGGCAGCCCCTCCCCTTTCCAACTTAAGGCTATGTATAGAAAGTCTCAAAAAATAAAACCATTTCTTCTTCGCTTCCCTCTCCTGTCTTCCCGCAAGCCACCGGCGACCTCCACGTTTCTCCAGCGCCAGTCGCCACCTCCACGATCTCCTCAGCTCCAGCTGCACTTCCGCATCGGCAGCACTGACCCCACCCACTGCCAGTCGCCAGTCGCCGACTCGCCACCTCCAGCGGCAGCGCACTCCATGGTTTGA

Protein sequence

MTTSKERLNGPTMVVGEGELHVFTVSSITNHVTRRSPVNSSTIFSLSSPCGSPSPFQLKAMYRKSQKIKPFLLRFPLLSSRKPPATSTFLQRQSPPPRSPQLQLHFRIGSTDPTHCQSPVADSPPPAAAHSMV

Homology

The following BLAST results are available for this feature:

BLAST of CcUC01G005810 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC01G005810 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC01G005810 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC01G005810 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G005810.1	CcUC01G005810.1	mRNA