CcUC01G004730 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G004730
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr01: 4756617 .. 4758393 (-)
RNA-Seq ExpressionCcUC01G004730
SyntenyCcUC01G004730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTACACACTATAAATTTATGGGAGAAATAAAAACATTATAATCCAAAAAGAAATATGGCAACTCATAAGCTTTCTGCAGTGTCCATCGCACTCGTGATTTTATTTGCCTGTTTTGTTGCATCAAGTAAGCTCTCGTCTGATCGTTCCTTCCACTTTCTCCCCTTTTTTTCTATTGAAACATTGTAAAAGTAAAAATATATTTTGAAGTGATTATCAAAATATATTGACGTTGGATAAATGTTAAAATTTAATTTTAAAAAATCTAAGATAATTTGAATTGATTTTTCGATAATTAGATGAAATGTGATTTTCTGGCATATTACGTGACTTTACCGTCTCTATAAGATACCTAAATTATTTTTATCATTGTTAATGATATATTAATCTCATAACAAAAAATTCAATTCAAGAATGGTGAACATGAAGAGGCACCATGTTGAGATCCCATATAGTTGGCCAAAATGGTCCCAAAAATTTGTTCAAATTTTATTCGCTTATTAAAATACCAAATTTGCCCTTGTATTATATATATATATATATATTCTTTCTTTTGTGGAGGCTTGACCCTAAATTTGGAAGCCTAACACAATAAATTACTTCTAAATACATAAAAATTACTTTTAAAATTTTGGTACAAAACATCACTATGATTATATAAAAATCAATTTTACAAAATTAATTGTACTTTAAATCACTTGTAATGCTAAAATCACTACTTCAACAATCCTTCTTAAACATGTGCCAAAGGTACGTTTGAGAGTGAATTTGACATTTCCAAAATAACTTTACTTTCAAATATTGATGTTAGGCAAATGTTATAAATGATTCTACAATAATTAATTAGTTGAGATGTGATTCTTAGTGGGGTGATTGACCAAGAATATAATGTTTAGAAGTTTAAAACCAAACATCATATGAATCCTACCTTTAAATCTTTTTTTTTTCCCAAGTCTAAATTATACAAAATACTCATAAACAAAAATATTCCTAAACTTTCAAAAGTTTCAAAAATATTTTTACACTTTCAAAAAAAAGTTAAAACATACCGTTATCATTCAGATGGAAAAAATATTAATATTTTGTTTAAAAAATATCATTTGAACTTTTAAAAGTTTCAATAATACAATTAAACTTTAAAAAAAAAAAAAAAAACCCTTTAATGTTAGCATATAAACCCAAATTGTTAATACTTGTTAAAAAATATCCTTAAACTTTCCAAGGTTGTATTGATACTCTTGATAAACTTTTGAAAACTCAAAGATATTTTTTGGAACTTTTGAAAGTTTAAGGATATTTTTGAAATAAAATCATTAATAATTTCTATCTAAAACTAACGATAAAAGTATTTTTGAACTCTCTTTGAAAGTTTAAAGGTATTTATGAAATTCTTGAAAGTTCAAAGGTAATCTCGACACAGAGTAGTGTGTAAAGTTCAAGATATTATTTATTTATTTATTTATTTATAATATAGACTTTTTCTAAACTCGATATTTCAAATTAAATAAAAGTTATTAATGTTTGATGGCATTACAGGTGAAGGACAAGGATTGTGGAATTGCCTTCGTCCATGTTCCATGGACTATAAAAATCTGTCATGTTATGTGGATTGCATCGCACAAAACAGAGGAACAGGATCTTGTATTCCTAAACGACTTGGCTCCGATGAATATGTTTGTTGTTGTACTGGTTGATACATAAAAATCAACGAATTATCTTCCTAAAAATAAAATGAAAGTACACATGTCAATTACATAATTAATTAAATTTTTGTTGGCT

mRNA sequence

ATTACACACTATAAATTTATGGGAGAAATAAAAACATTATAATCCAAAAAGAAATATGGCAACTCATAAGCTTTCTGCAGTGTCCATCGCACTCGTGATTTTATTTGCCTGTTTTGTTGCATCAAGTGAAGGACAAGGATTGTGGAATTGCCTTCGTCCATGTTCCATGGACTATAAAAATCTGTCATGTTATGTGGATTGCATCGCACAAAACAGAGGAACAGGATCTTGTATTCCTAAACGACTTGGCTCCGATGAATATGTTTGTTGTTGTACTGGTTGATACATAAAAATCAACGAATTATCTTCCTAAAAATAAAATGAAAGTACACATGTCAATTACATAATTAATTAAATTTTTGTTGGCT

Coding sequence (CDS)

ATGGCAACTCATAAGCTTTCTGCAGTGTCCATCGCACTCGTGATTTTATTTGCCTGTTTTGTTGCATCAAGTGAAGGACAAGGATTGTGGAATTGCCTTCGTCCATGTTCCATGGACTATAAAAATCTGTCATGTTATGTGGATTGCATCGCACAAAACAGAGGAACAGGATCTTGTATTCCTAAACGACTTGGCTCCGATGAATATGTTTGTTGTTGTACTGGTTGA

Protein sequence

MATHKLSAVSIALVILFACFVASSEGQGLWNCLRPCSMDYKNLSCYVDCIAQNRGTGSCIPKRLGSDEYVCCCTG
Homology
BLAST of CcUC01G004730 vs. NCBI nr
Match: KAA0043464.1 (hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0

Query: 1  MATHKLSAVSIALVILFACFVASSEGQGLWNCLRPCSMDYKNLSCYVDCIAQNRGTGSCI 60
          M T KL  V +A+ +L ACFV  SEGQGLWNC+RPCS  YK+LSCYVDC A N+GTG+CI
Sbjct: 1  MPTRKLLVVFVAITVLLACFVTLSEGQGLWNCIRPCSETYKSLSCYVDCGALNKGTGACI 60

Query: 61 PKRLGSDEYVCCCTG 76
          PKR  SDEYVCCCTG
Sbjct: 61 PKRPVSDEYVCCCTG 75

BLAST of CcUC01G004730 vs. NCBI nr
Match: KAG6605731.1 (hypothetical protein SDJN03_03048, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 93.6 bits (231), Expect = 7.8e-16
Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 0

Query: 1  MATHKLSAVSIALVILFACFVASSEGQGLWNCLRPCSMDYKNLSCYVDCIAQNRGTGSCI 60
          MAT KL AV IA++ L +C VAS+E QGLW+C+RPC+ D  N  C +DC+ ++RGTGSCI
Sbjct: 1  MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCI 60

Query: 61 PKR--LGSDEYVCCC 74
          PKR   G  E +CCC
Sbjct: 61 PKRDGTGGGELLCCC 75

BLAST of CcUC01G004730 vs. NCBI nr
Match: KAG7035638.1 (hypothetical protein SDJN02_02436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 93.6 bits (231), Expect = 7.8e-16
Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 0

Query: 1  MATHKLSAVSIALVILFACFVASSEGQGLWNCLRPCSMDYKNLSCYVDCIAQNRGTGSCI 60
          MAT KL AV IA++ L +C VAS+E QGLW+C+RPC+ D  N  C +DC+ ++RGTGSCI
Sbjct: 13 MATPKLFAVFIAVMFLCSCLVASTEVQGLWSCIRPCAKDELNYVCKLDCLHEHRGTGSCI 72

Query: 61 PKR--LGSDEYVCCC 74
          PKR   G  E +CCC
Sbjct: 73 PKRDGTGGGELLCCC 87

BLAST of CcUC01G004730 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 4.4e-11
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0

Query: 1  MATHKLSAVSIALVILFACFVASSEGQGLWNCLRPCSMDYKNLSCYVDCIAQNRGTGSCI 60
          M T KL  VS+ + + F+CF +S EG  LWNC+ PCS +  ++ C   CI Q+ G G C+
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCV 60

Query: 61 PKRLG-SDEYVCCC 74
          PK  G SD  VCCC
Sbjct: 61 PKLPGISDMKVCCC 74

BLAST of CcUC01G004730 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 2.2e-10
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0

Query: 1  MATHKLSAVSIALVILFACFVASSEGQGL-WNCLRPCSMDYKNLSCYVDCIAQNRGTGSC 60
          MAT KL+ VSI ++++ AC V++++G  L  NC+RPCS  Y + SCY DCI +N G G C
Sbjct: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60

Query: 61 IPKRLGSDEYVCC 73
           PK   +D+  CC
Sbjct: 61 YPKLPSTDKDCCC 73

BLAST of CcUC01G004730 vs. ExPASy TrEMBL
Match: A0A5A7TJH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00010 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0

Query: 1  MATHKLSAVSIALVILFACFVASSEGQGLWNCLRPCSMDYKNLSCYVDCIAQNRGTGSCI 60
          M T KL  V +A+ +L ACFV  SEGQGLWNC+RPCS  YK+LSCYVDC A N+GTG+CI
Sbjct: 1  MPTRKLLVVFVAITVLLACFVTLSEGQGLWNCIRPCSETYKSLSCYVDCGALNKGTGACI 60

Query: 61 PKRLGSDEYVCCCTG 76
          PKR  SDEYVCCCTG
Sbjct: 61 PKRPVSDEYVCCCTG 75

BLAST of CcUC01G004730 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.2e-11
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0

Query: 1  MATHKLSAVSIALVILFACFVASSEGQGLWNCLRPCSMDYKNLSCYVDCIAQNRGTGSCI 60
          M T KL  VS+ + + F+CF +S EG  LWNC+ PCS +  ++ C   CI Q+ G G C+
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCV 60

Query: 61 PKRLG-SDEYVCCC 74
          PK  G SD  VCCC
Sbjct: 61 PKLPGISDMKVCCC 74

BLAST of CcUC01G004730 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-10
Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0

Query: 1  MATHKLSAVSIALVILFACFVASSEGQGL-WNCLRPCSMDYKNLSCYVDCIAQNRGTGSC 60
          MAT KL+ +SI ++++FAC  ++++G  L  +C+RPCS  Y + SCY DCI +N G G C
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 IPKRLGSDEYVCC 73
           PK   +D+  CC
Sbjct: 61 YPKLPSTDKDCCC 73

BLAST of CcUC01G004730 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 0

Query: 1  MATHKLSAVSIALVILFACFVASSEGQGL-WNCLRPCSMDYKNLSCYVDCIAQNRGTGSC 60
          MAT KL+ +SI ++++F C V++++G  L  +C+RPC   Y + SCY DCI +N G G C
Sbjct: 1  MATQKLATISIVVLVIFPCIVSTTKGDVLNVHCVRPCYDTYDDESCYNDCIRENLGAGFC 60

Query: 61 IPKRLGSDEYVCC 73
           PK   +D+  CC
Sbjct: 61 YPKLPSTDKDCCC 73

BLAST of CcUC01G004730 vs. ExPASy TrEMBL
Match: A0A0A0LKF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-04
Identity = 21/42 (50.00%), Postives = 27/42 (64.29%), Query Frame = 0

Query: 31 NCLRPCSMDYKNLSCYVDCIAQNRGTGSCIPKRLGSDEYVCC 73
          +C+RPCS  Y + SCY DCI +N G G C PK   +D+  CC
Sbjct: 11 HCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCC 52

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0043464.13.5e-2470.67hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa][more]
KAG6605731.17.8e-1657.33hypothetical protein SDJN03_03048, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7035638.17.8e-1657.33hypothetical protein SDJN02_02436, partial [Cucurbita argyrosperma subsp. argyro... [more]
KGN54497.14.4e-1147.30hypothetical protein Csa_012842 [Cucumis sativus][more]
KAE8651697.12.2e-1047.95hypothetical protein Csa_006343 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TJH11.7e-2470.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0L1R82.2e-1147.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1[more]
A0A0A0LHG94.1e-1045.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1[more]
A0A0A0LJG51.5e-0943.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1[more]
A0A0A0LKF53.3e-0450.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G004730.1CcUC01G004730.1mRNA