CcUC01G004730 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTACACACTATAAATTTATGGGAGAAATAAAAACATTATAATCCAAAAAGAAATATGGCAACTCATAAGCTTTCTGCAGTGTCCATCGCACTCGTGATTTTATTTGCCTGTTTTGTTGCATCAAGTAAGCTCTCGTCTGATCGTTCCTTCCACTTTCTCCCCTTTTTTTCTATTGAAACATTGTAAAAGTAAAAATATATTTTGAAGTGATTATCAAAATATATTGACGTTGGATAAATGTTAAAATTTAATTTTAAAAAATCTAAGATAATTTGAATTGATTTTTCGATAATTAGATGAAATGTGATTTTCTGGCATATTACGTGACTTTACCGTCTCTATAAGATACCTAAATTATTTTTATCATTGTTAATGATATATTAATCTCATAACAAAAAATTCAATTCAAGAATGGTGAACATGAAGAGGCACCATGTTGAGATCCCATATAGTTGGCCAAAATGGTCCCAAAAATTTGTTCAAATTTTATTCGCTTATTAAAATACCAAATTTGCCCTTGTATTATATATATATATATATATTCTTTCTTTTGTGGAGGCTTGACCCTAAATTTGGAAGCCTAACACAATAAATTACTTCTAAATACATAAAAATTACTTTTAAAATTTTGGTACAAAACATCACTATGATTATATAAAAATCAATTTTACAAAATTAATTGTACTTTAAATCACTTGTAATGCTAAAATCACTACTTCAACAATCCTTCTTAAACATGTGCCAAAGGTACGTTTGAGAGTGAATTTGACATTTCCAAAATAACTTTACTTTCAAATATTGATGTTAGGCAAATGTTATAAATGATTCTACAATAATTAATTAGTTGAGATGTGATTCTTAGTGGGGTGATTGACCAAGAATATAATGTTTAGAAGTTTAAAACCAAACATCATATGAATCCTACCTTTAAATCTTTTTTTTTTCCCAAGTCTAAATTATACAAAATACTCATAAACAAAAATATTCCTAAACTTTCAAAAGTTTCAAAAATATTTTTACACTTTCAAAAAAAAGTTAAAACATACCGTTATCATTCAGATGGAAAAAATATTAATATTTTGTTTAAAAAATATCATTTGAACTTTTAAAAGTTTCAATAATACAATTAAACTTTAAAAAAAAAAAAAAAAACCCTTTAATGTTAGCATATAAACCCAAATTGTTAATACTTGTTAAAAAATATCCTTAAACTTTCCAAGGTTGTATTGATACTCTTGATAAACTTTTGAAAACTCAAAGATATTTTTTGGAACTTTTGAAAGTTTAAGGATATTTTTGAAATAAAATCATTAATAATTTCTATCTAAAACTAACGATAAAAGTATTTTTGAACTCTCTTTGAAAGTTTAAAGGTATTTATGAAATTCTTGAAAGTTCAAAGGTAATCTCGACACAGAGTAGTGTGTAAAGTTCAAGATATTATTTATTTATTTATTTATTTATAATATAGACTTTTTCTAAACTCGATATTTCAAATTAAATAAAAGTTATTAATGTTTGATGGCATTACAGGTGAAGGACAAGGATTGTGGAATTGCCTTCGTCCATGTTCCATGGACTATAAAAATCTGTCATGTTATGTGGATTGCATCGCACAAAACAGAGGAACAGGATCTTGTATTCCTAAACGACTTGGCTCCGATGAATATGTTTGTTGTTGTACTGGTTGATACATAAAAATCAACGAATTATCTTCCTAAAAATAAAATGAAAGTACACATGTCAATTACATAATTAATTAAATTTTTGTTGGCT ATTACACACTATAAATTTATGGGAGAAATAAAAACATTATAATCCAAAAAGAAATATGGCAACTCATAAGCTTTCTGCAGTGTCCATCGCACTCGTGATTTTATTTGCCTGTTTTGTTGCATCAAGTGAAGGACAAGGATTGTGGAATTGCCTTCGTCCATGTTCCATGGACTATAAAAATCTGTCATGTTATGTGGATTGCATCGCACAAAACAGAGGAACAGGATCTTGTATTCCTAAACGACTTGGCTCCGATGAATATGTTTGTTGTTGTACTGGTTGATACATAAAAATCAACGAATTATCTTCCTAAAAATAAAATGAAAGTACACATGTCAATTACATAATTAATTAAATTTTTGTTGGCT ATGGCAACTCATAAGCTTTCTGCAGTGTCCATCGCACTCGTGATTTTATTTGCCTGTTTTGTTGCATCAAGTGAAGGACAAGGATTGTGGAATTGCCTTCGTCCATGTTCCATGGACTATAAAAATCTGTCATGTTATGTGGATTGCATCGCACAAAACAGAGGAACAGGATCTTGTATTCCTAAACGACTTGGCTCCGATGAATATGTTTGTTGTTGTACTGGTTGA MATHKLSAVSIALVILFACFVASSEGQGLWNCLRPCSMDYKNLSCYVDCIAQNRGTGSCIPKRLGSDEYVCCCTG Homology
BLAST of CcUC01G004730 vs. NCBI nr
Match: KAA0043464.1 (hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 121.3 bits (303), Expect = 3.5e-24 Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of CcUC01G004730 vs. NCBI nr
Match: KAG6605731.1 (hypothetical protein SDJN03_03048, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 93.6 bits (231), Expect = 7.8e-16 Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of CcUC01G004730 vs. NCBI nr
Match: KAG7035638.1 (hypothetical protein SDJN02_02436, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 93.6 bits (231), Expect = 7.8e-16 Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of CcUC01G004730 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus]) HSP 1 Score: 77.8 bits (190), Expect = 4.4e-11 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of CcUC01G004730 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 2.2e-10 Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of CcUC01G004730 vs. ExPASy TrEMBL
Match: A0A5A7TJH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00010 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24 Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of CcUC01G004730 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.2e-11 Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of CcUC01G004730 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.1e-10 Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of CcUC01G004730 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09 Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of CcUC01G004730 vs. ExPASy TrEMBL
Match: A0A0A0LKF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.3e-04 Identity = 21/42 (50.00%), Postives = 27/42 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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