CcUC01G004550 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCTCTTTACAAGACTTCTCCGATCCCTCCATCACCGGCATCCTCTTCCGCTCCACCGGCTTCTTCCACTGCGCCGCCTGCTCTACCGCCACCACCGGCGGCCCCTCCTTCCACTGCCTTGCCTGCCCTTTCTCCCTCTCCGCCGCCTGCGCCGCCCTTCCCCTCATCACCGTCGACAACCACCCCCACCCCCTTCTCCTCCTGAACAGAAACTCCAATCACGAGCATTTGATTTGCGCAGTGTGTGACGAAGGAATCAGTTTCCCCAGTTTCGTCCGATGTGTTCACTGCGATGCCTTTCTTCATGTTCAATGTGCTCTTCCGCCCGTCATTAAAGCTCATAATCACCATCTTCATCCGGTTATGCTTTCCATTGTTGCTGGTTACCCTAATTTGTGTGGCGTTTGTGGAGAAGAAAGAGAGGGAGAGCCATGGTTTTATTGCTGTGAGATTTGTCCATTTCTTGCTCATGTTGGTTGTGTCACCTATGATCTTCAGGTGCATCATCCTTCATCCTCTTTTTTTTCCTTTTCAACTTAGTCTCTAAATTTTTTTAGTCGAGTTTGGTTTTGAAAGATTTTTCCTATTGTGTTTTGTTCACATTTGATTATAGTTTTGTTGTTTTGTTTTTAAAAATTGTGCGCGATTTCAAATATTTGAATTTTGAATGAATTTCAAAAACAAATTTTGTAAGAACTTTTTTTTTATTTTTAAAAATTAGACTTGGTGTTGAAAATATTTTTAAAAGTAGATACACCAAAAACAAAAAGACAAAAGAAAGAAAGTAAGAAAGAACAAATTCCAAAAACCACCCTTAAAATATAGTAGATACAATTATACTCTCAAATTTTTAATCGTTAAAATTGAGATCTCAAACTTTTACAAACGTTAAGATTGAACCTTCAAACTTACATAATTGTTGAAATTGGAACAGTTGTATAAATTTGGGTGTTTAATTTTTATCATTTGGGGGTCTAATTTTTACTACTATTAATTGTAAATTTGAGGTTCCAATTTTAACTTTTGTCTAAGGGCTCAATTTTTACAATGGTAAGTTTCGGGATCTAATTCCAACTATCATCATACTTAAATGGTGATTCTTGCCATTTGCCCAGGAAGAAACACTAGAGGGTGTTTGTTCCAAAGAGTTTGTGGATCCATAATTAAAAAAGAACATCAATTTTATGTTTTATTAACTCTTTACATATTGCATGTCTTACCAATTCATAACTTCACTCCCGACCCCAAATATCTAATCAACTGTTATAAGCTTAACTTTTTTTAAATAAACCAAAAGTAAAAAACTAAGAGCTTTTTACTTTGAGAAACATTTTGGTTTTAGGTTTTTTATATATTAAAAAAATGTGCTTGTTTTTTTTCACAATTTTGTTAAAATGTTTTTTCATTTTTTTTTTTAAGAAATGTTAGAATTCATAGCCAAATCCCAAAAATAAAAAAACAAAAAACAATGTTGTTAAAATCTATGACCACGTTTGATATCATTTGGGCACCCCATTTGACAATAATTTTGTTTTTACTTTTCTATTTTTGAAACTTATATTTGTTTCATTTCAATTTTTCAAATATAGTTTTTATATTTCTTAAAGAAACACACTTGAGAACTCCTAGCTAAGTTTGGAAACAAAAACAAATTTTTTTTTAAACAATATCAAAACTTGGGTTGGTTCTTAAACAGTTTCAATCTTTAGTTTTTAGTTTTAAAACATTTGTACACATTTGAATTCATCAATAAATTGCAAAAGCAAAAAAACAAGTTCTTGAAAACAAAAGACTGTGCTTGATTATAATTTTGTTTTTAGTATTTTAAACTTATCTACTTTTTCAAAAGATTAGAGGTTGAAAATAAAACAAAGAAATCAACAAGTGATAATGATATTTATAAGGTTAATTTTTAAAAAATCAAATAGTCATTAAATAACTACTCAAAATCATACATAAATTTAGACATGTTTTGAATCCCTTTGTCTAATTTTTCCCTACAGATCCCAAGTGAAAAAGAAGCAGAAGAAGGATCCATAACAACCCAACTTTGTACATTGGCATTGGATAATGATGAACATAATTTGGATGAAGAAGGAAGCCATGAAAGCATACTAAAGCCTGGAATAACCCTACAGCAGATCCTCGATTCTTTCTCCGAATCCGACGATGCTGAATATGAAAGCTTTGTAGCTGCAATGGTGAAAGGCTCCGGTGGTGATGACAACAATGAGGAGACTGGAAATGGAGCCAATTCTGGGGACAAACATTTGAACCATTTTTGGTACCCTGAGAAACCTCTTTCCAATCTCATAGACAAACTCGAACTCGAAGATGCCAACCCTTTTGAAGGTTTTGATAGAGACTCCCCGACGATTCTCGTCGGCGGACAGTACTTGGTCTTGGAGAAACTGGCAGGAGCTTTCACTAGAGTTTTCAGGAAACATGTAGATATCTCAGGTAATGTTTTAAATGTTGTAAAAATTGTTAATGTCCATGGATGTTTATAGAAAAAAAAATCTTAAAATTTAAGAATTTTCACAAAGAAGATAGTATTCATATTGATTCTTTTTTTCTTCATAATTTTTGGTTTCAAATCCTTTTTTTTTTTAAGCTTTAAAATTTAAAGAATAGAGATAAGAAAATATATATGACATGTCAATGAAAGTTTGTCAGAGAACTCGAATATGGGCATAAAAGTGAAAACGATTGTTTGGAATTTGTTCAGCAAAGTGATCGACGACATGTCAAGAACAGAGTTCGAGAACATGACGGGAGAGCATCTAGTTTCATGGATGATTGGGATCAGAACAATTGAACTAGCTGGTTTTGAATTGGAGTTTGTATTTGAAGGTTGGAAGAAGATAGCAATGGCTTTCTTTGGTGTTAAGGCAAAAGAGGTAGCTGAAGAATTGGTTGTAGAATGGGAAGAGAAGATTAAAGAACAAAGAATGAAGCTGGAAAATCTTTGTGAAGAACAAGAAAAGCTTTTGAGTTTAAGAGAAAAGTGTCACATGGAAGCTCTGGCTATGGAGGGGAAGTTTGTAGCTGATGGGTTGATCTAAACAAATTATTTCGGTTCTATAAAATATTTTTTTATTCCCTAAGTGTTTACTGTAGTTTTCATTCTGTCTTTATGTTTTAAAATGTTACACATTCATTCCTACATTTTGAGTTTAATATTCATTTGGTCTTTGGGTTTCACAATATTATACCTTTTAAATCTTGGGTTTACTTTCCATTTGGTTCCTAAATTTAAGAAAGTTACACTTTTACCTTATAATTTTGAGTTAAATTTTCATGTGGTTCCCTAAGTTTCAAAATATTACATTTTTAATTACCCTTGAGTTTTGAGTTTATTTTTCATCTAGCTCCTATGTTCAATCTTCTATACTTTTGCCCTCAGCTTTTACTAATGTTCACTTCTTGTCTTTGGCCTTATTTTCTAAGTTAATTAATTTAAAATTAATTATGATATGATTTTTTTTGTTAATTTTGATAATGATGGAAAATTAGTAAAACAAACAATTTAAATTCTCTTAAATTCATTAATAGACTTTTAACACGAAGTGAGTATTTAGTGATGTTAAAAGTGAGAATGAAAATATCCGTGGATATGTTGATATACCCGTCGATATATCCATAAATTGAAGAGTTCGATATCGATATTAAATATCAATGGATATTTCCAACATCTTTTATTAATGCTTGTAAAACATATATAAAAAAAAAAAAAAAAAGCATTATCTATTTAGTTTAATATGAATAGTAATACTAATAACAATATCCATATCTTAGTTTGGGGGTAAAACCAAATTAATTATTAATCCAAATAAATTTTATAAAATTCGTGATTTACAGAAATATCCATCGATGTCAATATTTTGTCGATATATTGGTAAAATTGAAATGGTGATTTCAATATCGACATCGATATTTTAATTTTTGGTTAAAAGTGTATATTTTGAAACCTAAAGACCAAATGAAAACAAAAACCAAACCCAAAATCTAGGGACCATATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATTATCTATTTAGTTTAATATGAATAGTAATACTAATAACAATATCCATATCTTAGTTTGGGGGTAAAACCAAATTAATTATTAATCCAAATAAATTTTATAAAATTCGTGATTTACAGAAATATCCATCGATGTCAATATTTTGTCGATATATTGGTAAAATTGAAATGGTGATTTCAATATCGACATCGATATTTTAATTTTTGGTTAAAAGTGTATATTTTGAAACCTAAAGACCAAATGAAAACAAAAACCAAACCCAAAATCTAGGGACCATATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCTTTGGGTTTAGTATTTATATTTTTAACTTTGGTTCATTTTGATTTTTATACTTTTCATAATGTTCATTTAGTCTTTGTATTTTTGGCTTTTGTTCTACTTAGTTCTTACACTTTGGATTTTCTTTTTGCAAGAAGTGGCGATTTGGTTCCTCCTCATTTCATTGAACTAATTAACCAATTTTTCTTTAAAATGCTCCAATTGAGCATTTAGGCTTCGTTTTCCAACCGGCAATCTCAAGGATTGTAGTCCAATTTATGAAAGTGGATCCACTTAATTATTTTTTGGTTGTTTACACATCTTTGTAAACCAAAAGGAGGGTGGGACCCATGTAATTACATTGCCCGCAATCAAGCAATTTGATTTTTCACACGAGAAGTGATATTCTAATTATGTTGGACCCACCGAATTTTTACATATTTTGCTCTTCTCTTGGACCTCTACACCTCGATTTGAGCTCTTTTTTCTTCATCCTCACCACAGGGCCATCAACAATTTGGTATCAACTTCTCCCTTTATAATTCACAACTAGTTTTATAATTTATAAATATAGTATAAACACATTAATGGTTTAAATTAGAATCAAATCTTTAAATTTAGTGCCAAACACCCATCTACGTTTTTTTTTAATTGTTCTTATTGAATTTTGTGTCTATTAGAAATTAGAAAATTGTAACAAATATAAGGATGTGAGTTTGTAATATTTCTTTCTTTTTTGGAGAAACACAACATGCTAGACGACAGGAACGACGCTGATGGTCAACGTTGGTTCCTCTACATGGAGAAATGTAACCAAATTATTTATTATTATTATTATTATTATTATTATTTAGATAAACCAAATTAAAATCTTAACAATAAAGATTACGTGTATCTTTTAA ATGATCTCTTTACAAGACTTCTCCGATCCCTCCATCACCGGCATCCTCTTCCGCTCCACCGGCTTCTTCCACTGCGCCGCCTGCTCTACCGCCACCACCGGCGGCCCCTCCTTCCACTGCCTTGCCTGCCCTTTCTCCCTCTCCGCCGCCTGCGCCGCCCTTCCCCTCATCACCGTCGACAACCACCCCCACCCCCTTCTCCTCCTGAACAGAAACTCCAATCACGAGCATTTGATTTGCGCAGTGTGTGACGAAGGAATCAGTTTCCCCAGTTTCGTCCGATGTGTTCACTGCGATGCCTTTCTTCATGTTCAATGTGCTCTTCCGCCCGTCATTAAAGCTCATAATCACCATCTTCATCCGGTTATGCTTTCCATTGTTGCTGGTTACCCTAATTTGTGTGGCGTTTGTGGAGAAGAAAGAGAGGGAGAGCCATGGTTTTATTGCTGTGAGATTTGTCCATTTCTTGCTCATGTTGGTTGTGTCACCTATGATCTTCAGATCCCAAGTGAAAAAGAAGCAGAAGAAGGATCCATAACAACCCAACTTTGTACATTGGCATTGGATAATGATGAACATAATTTGGATGAAGAAGGAAGCCATGAAAGCATACTAAAGCCTGGAATAACCCTACAGCAGATCCTCGATTCTTTCTCCGAATCCGACGATGCTGAATATGAAAGCTTTGTAGCTGCAATGGTGAAAGGCTCCGGTGGTGATGACAACAATGAGGAGACTGGAAATGGAGCCAATTCTGGGGACAAACATTTGAACCATTTTTGGTACCCTGAGAAACCTCTTTCCAATCTCATAGACAAACTCGAACTCGAAGATGCCAACCCTTTTGAAGGTTTTGATAGAGACTCCCCGACGATTCTCGTCGGCGGACAGTACTTGGTCTTGGAGAAACTGGCAGGAGCTTTCACTAGAGTTTTCAGGAAACATGTAGATATCTCAGAGAACTCGAATATGGGCATAAAAGTGAAAACGATTGTTTGGAATTTGTTCAGCAAAGTGATCGACGACATGTCAAGAACAGAGTTCGAGAACATGACGGGAGAGCATCTAGTTTCATGGATGATTGGGATCAGAACAATTGAACTAGCTGGTTTTGAATTGGAGTTTGTATTTGAAGGTTGGAAGAAGATAGCAATGGCTTTCTTTGGTGTTAAGGCAAAAGAGATAAACCAAATTAAAATCTTAACAATAAAGATTACGTGTATCTTTTAA ATGATCTCTTTACAAGACTTCTCCGATCCCTCCATCACCGGCATCCTCTTCCGCTCCACCGGCTTCTTCCACTGCGCCGCCTGCTCTACCGCCACCACCGGCGGCCCCTCCTTCCACTGCCTTGCCTGCCCTTTCTCCCTCTCCGCCGCCTGCGCCGCCCTTCCCCTCATCACCGTCGACAACCACCCCCACCCCCTTCTCCTCCTGAACAGAAACTCCAATCACGAGCATTTGATTTGCGCAGTGTGTGACGAAGGAATCAGTTTCCCCAGTTTCGTCCGATGTGTTCACTGCGATGCCTTTCTTCATGTTCAATGTGCTCTTCCGCCCGTCATTAAAGCTCATAATCACCATCTTCATCCGGTTATGCTTTCCATTGTTGCTGGTTACCCTAATTTGTGTGGCGTTTGTGGAGAAGAAAGAGAGGGAGAGCCATGGTTTTATTGCTGTGAGATTTGTCCATTTCTTGCTCATGTTGGTTGTGTCACCTATGATCTTCAGATCCCAAGTGAAAAAGAAGCAGAAGAAGGATCCATAACAACCCAACTTTGTACATTGGCATTGGATAATGATGAACATAATTTGGATGAAGAAGGAAGCCATGAAAGCATACTAAAGCCTGGAATAACCCTACAGCAGATCCTCGATTCTTTCTCCGAATCCGACGATGCTGAATATGAAAGCTTTGTAGCTGCAATGGTGAAAGGCTCCGGTGGTGATGACAACAATGAGGAGACTGGAAATGGAGCCAATTCTGGGGACAAACATTTGAACCATTTTTGGTACCCTGAGAAACCTCTTTCCAATCTCATAGACAAACTCGAACTCGAAGATGCCAACCCTTTTGAAGGTTTTGATAGAGACTCCCCGACGATTCTCGTCGGCGGACAGTACTTGGTCTTGGAGAAACTGGCAGGAGCTTTCACTAGAGTTTTCAGGAAACATGTAGATATCTCAGAGAACTCGAATATGGGCATAAAAGTGAAAACGATTGTTTGGAATTTGTTCAGCAAAGTGATCGACGACATGTCAAGAACAGAGTTCGAGAACATGACGGGAGAGCATCTAGTTTCATGGATGATTGGGATCAGAACAATTGAACTAGCTGGTTTTGAATTGGAGTTTGTATTTGAAGGTTGGAAGAAGATAGCAATGGCTTTCTTTGGTGTTAAGGCAAAAGAGATAAACCAAATTAAAATCTTAACAATAAAGATTACGTGTATCTTTTAA MISLQDFSDPSITGILFRSTGFFHCAACSTATTGGPSFHCLACPFSLSAACAALPLITVDNHPHPLLLLNRNSNHEHLICAVCDEGISFPSFVRCVHCDAFLHVQCALPPVIKAHNHHLHPVMLSIVAGYPNLCGVCGEEREGEPWFYCCEICPFLAHVGCVTYDLQIPSEKEAEEGSITTQLCTLALDNDEHNLDEEGSHESILKPGITLQQILDSFSESDDAEYESFVAAMVKGSGGDDNNEETGNGANSGDKHLNHFWYPEKPLSNLIDKLELEDANPFEGFDRDSPTILVGGQYLVLEKLAGAFTRVFRKHVDISENSNMGIKVKTIVWNLFSKVIDDMSRTEFENMTGEHLVSWMIGIRTIELAGFELEFVFEGWKKIAMAFFGVKAKEINQIKILTIKITCIF Homology
BLAST of CcUC01G004550 vs. NCBI nr
Match: XP_008437037.1 (PREDICTED: uncharacterized protein LOC103482586 [Cucumis melo]) HSP 1 Score: 661.4 bits (1705), Expect = 5.1e-186 Identity = 314/398 (78.89%), Postives = 354/398 (88.94%), Query Frame = 0
BLAST of CcUC01G004550 vs. NCBI nr
Match: XP_011654823.1 (uncharacterized protein LOC105435447 [Cucumis sativus] >KGN50281.1 hypothetical protein Csa_000327 [Cucumis sativus]) HSP 1 Score: 653.3 bits (1684), Expect = 1.4e-183 Identity = 313/399 (78.45%), Postives = 351/399 (87.97%), Query Frame = 0
BLAST of CcUC01G004550 vs. NCBI nr
Match: XP_023532965.1 (uncharacterized protein LOC111794977 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 558.5 bits (1438), Expect = 4.7e-155 Identity = 275/407 (67.57%), Postives = 327/407 (80.34%), Query Frame = 0
BLAST of CcUC01G004550 vs. NCBI nr
Match: KAG7036143.1 (hypothetical protein SDJN02_02944, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 557.8 bits (1436), Expect = 8.0e-155 Identity = 274/410 (66.83%), Postives = 328/410 (80.00%), Query Frame = 0
BLAST of CcUC01G004550 vs. NCBI nr
Match: XP_022958392.1 (uncharacterized protein LOC111459628 [Cucurbita moschata]) HSP 1 Score: 557.8 bits (1436), Expect = 8.0e-155 Identity = 274/407 (67.32%), Postives = 327/407 (80.34%), Query Frame = 0
BLAST of CcUC01G004550 vs. ExPASy TrEMBL
Match: A0A1S3ATM1 (uncharacterized protein LOC103482586 OS=Cucumis melo OX=3656 GN=LOC103482586 PE=4 SV=1) HSP 1 Score: 661.4 bits (1705), Expect = 2.5e-186 Identity = 314/398 (78.89%), Postives = 354/398 (88.94%), Query Frame = 0
BLAST of CcUC01G004550 vs. ExPASy TrEMBL
Match: A0A0A0KRD1 (C1_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165270 PE=4 SV=1) HSP 1 Score: 653.3 bits (1684), Expect = 6.8e-184 Identity = 313/399 (78.45%), Postives = 351/399 (87.97%), Query Frame = 0
BLAST of CcUC01G004550 vs. ExPASy TrEMBL
Match: A0A6J1H1P8 (uncharacterized protein LOC111459628 OS=Cucurbita moschata OX=3662 GN=LOC111459628 PE=4 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 3.9e-155 Identity = 274/407 (67.32%), Postives = 327/407 (80.34%), Query Frame = 0
BLAST of CcUC01G004550 vs. ExPASy TrEMBL
Match: A0A6J1K6X3 (uncharacterized protein LOC111491223 OS=Cucurbita maxima OX=3661 GN=LOC111491223 PE=4 SV=1) HSP 1 Score: 550.1 bits (1416), Expect = 8.1e-153 Identity = 270/407 (66.34%), Postives = 325/407 (79.85%), Query Frame = 0
BLAST of CcUC01G004550 vs. ExPASy TrEMBL
Match: A0A5A7TKZ5 (Fiber Fb17-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00390 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 4.7e-92 Identity = 173/230 (75.22%), Postives = 201/230 (87.39%), Query Frame = 0
BLAST of CcUC01G004550 vs. TAIR 10
Match: AT2G23100.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 76.3 bits (186), Expect = 6.6e-14 Identity = 54/186 (29.03%), Postives = 83/186 (44.62%), Query Frame = 0
BLAST of CcUC01G004550 vs. TAIR 10
Match: AT5G03360.1 (DC1 domain-containing protein ) HSP 1 Score: 73.2 bits (178), Expect = 5.6e-13 Identity = 50/151 (33.11%), Postives = 64/151 (42.38%), Query Frame = 0
BLAST of CcUC01G004550 vs. TAIR 10
Match: AT5G03360.2 (DC1 domain-containing protein ) HSP 1 Score: 73.2 bits (178), Expect = 5.6e-13 Identity = 50/151 (33.11%), Postives = 64/151 (42.38%), Query Frame = 0
BLAST of CcUC01G004550 vs. TAIR 10
Match: AT4G26380.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 68.6 bits (166), Expect = 1.4e-11 Identity = 49/161 (30.43%), Postives = 76/161 (47.20%), Query Frame = 0
BLAST of CcUC01G004550 vs. TAIR 10
Match: AT2G21830.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 67.8 bits (164), Expect = 2.3e-11 Identity = 46/157 (29.30%), Postives = 67/157 (42.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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