CcUC01G004250 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGGGCGGCACGTGTTTTGCTCCTCCCTTCTCTTGTCCGCAGCACGTTCGCCATTGTCCCTCCTCTCTTTTCTCGATCTGTTCGCGAAACTTGCTCTCAAGCAAACTCATTTCCAGATTCTCTTCTCTTCAATCTCTTCCATTTCATCTTCCCTTTTCTGATCCTGCTTCACTCTTCTCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTGTGAGTTTATCTTTTTTTTTTTTTTTTTTTTTTTCTTTTCTTTTCTGGGAGATTTCCTTCTTGTGGATCTGTAATCTTTTCAGGGTTCTTTTTTGTTTTTTGTTTTGATTTCATTTCTGCTTAATTTGTTTTTGTTTTCTTTGTTTCTTTCTCGTTAGTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGTGTGTTTTCTTTCTTTCTGTTTGAATCCTTCTAGGTTTGATGCAATTTGTTTGATTTGCGTAATTGATCTTTTCTACTATGAAATGCTTTGGTACTCGTAGTATTAAGCTGTTCTGTATTTGGAATGTAGGCGTCTGCACTTTTTTTTCTCATTTCTTTCGCCCTTCTCTCTTGATGTATCTGTCTGGCGTCAGATCATGTTGTGAAATTTGTTAATTTCGTCCATTTTCAATTAGCTTGTATTTGAATACTTTGTTCTATGTGTTTTGTCCACTTAAATTAAATTGATCCTTTTCTAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGGTGCCAAATGCCAATATCAACTATTGTCATTCGTAGTTTTAAATTTTCAAATTAGTTTTTTGGTTAGTGATATAGAGAGTACTTTGTTGTCTAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGGTATATTTAGTGTGAATGTTTAAAGCTTGTGGTTAGTATTAGCATTCTACTTTTATTTATGGGCGTGGGGTTTGCAGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGTGAGTAGTTGGGTTCTCTTTTTTTCCTATTCGTTCTTCTGCATAGTTGATTGACACACCTTCACCTTCTGTTTGTAGGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGTAAAATAATAGGAAGATTGTTGGTTTGCTATAGGTGTAAAGTTTTATGTCTGCAGATAATATAGATGATTCTCTCTTTTCTTTTCGGTAATTCTGATGCCTGATTTATGTGCTCTCTCTTTTCTATTCGGTAATTCTGATGCCTGATTTATGTGCATAGCTTGTGATGTATTTAAAATTTTCTCCTCCAAATTTCCATCTCTATTAATTTTTTTTTATTAGATAGAACTCAATGCTAATGTGTGACCTTGTGATTGAAGTGTCACTCTGAGCAGTGAACAATAAAATTTTCTCGGGGCAGTATTCTATAGTAGTTAACTGTACACTTGTGAAGTTTTGGGTGAACTTGTTACATGATAGAAGTATTTGTTTTTTAAAGACTGCTCAAAATGGTTAGCTATACTTTAAGCATATTTTGTTGCATTCTAATCTTAAATGAAATCATTATGTTTCATTGTAGTTCTTAGTGTTAACATACAGGTGGATGCAACTTCCTTGGCATAATATTTGTAATACTTGAAGATTTACTTTTGAAATTTTGTTTAAACATGCCGAGTGCTTATTTTGTATGGATTTCTTATAATGGTTTGGTCATGTATATGATCTTTGATCATATTTCCTAACTTTAACGGAACCAGTATTACATGATAACAGTATTTTCATCACAAAACAATAAATTTAACATGATACTGCTATTGTTAATCTATGCATGGATACTGTTGGCATAATCTCGTCCCCAAGTATTGCAATATTGGGATAGAACTACCAAGAATTGCCTAGCAGGGAAGAGGTAAAAGTGGATATTTTTGATGTCATAAGATCAAGCCAGGACCGTGACCATTAGATATTTTACCTTTTCTCCAGTGCCAAATAAAGAGTTAGGATAGGATACATCCACTTGGAGAGAACCTTCCTGAACTGTTGACTTGAACGATCCTTTATCTGTGAAAGAATGATGCTATATTCTTGTCTTGCTGCCGTGTATTAAACTCTTTCCAAAGTTTCCTGGCAACTAATCGATTCTCTGAAGTATGTTTTATGCATTCAGTTCGGTTTGCTTCTTCGTTGAATGTTGTAAAATTCCCCATCTGTTCCTTGGCATGACTATCCAGTTAAATTTTCTAACACAGCTAATCAATCGTTCTCTTTGCCAAAAGATAACTAAGCTAAGCTCAGGACCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCAATAATAGACAGAAACTGCTTCAATCTTTCAAGCTATAGTTCCTTTTATGTGGTACTTCGTCCCTTTCCTGCAGAATTTTTTGTTGATACCTGAAAGTACTGTAATTCACAAGTCCATTGACCCATGGATCTCTCGTGCTTGTTTCTTTAAACGAAAATGTTGATTTTCTTCTTTGTTTGTGCAATGTTCTCAAACTTTTATCATGGTTCTCAGATGTTTTTAAATTATTCGGCACTATGAAGATGGTTTGATTGACTAAATCCTGGGCCACTGCAGCTATTTGTGTACGTGTGTGTGCGTTTTCATGTATGCATATACTGTACTTTTTACTTCTAGCAGGATGCTTATTGACGGCTACTTAATATGTGCAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGTAAGAAGAATGATTTGAAGCTTCACTAGATGCAGTTTTGCTCAAGAAGTTTCATATATGATTCCATTGGAAACAACGCCTTTACTTTTGAGATATACTTGCTAAATCTCTAGCTCACATTTCCTGAATAATACCACCTTTTGACGATTACGCAAAGGAAATATTTACTATAACATTTAACTTTCTTTGTACGGTTTCAAATAAGATTATACTCAATGATTCTCATTTTCTTGGAATATTAGAATAACAGGGTTGCATTAGTTTCTTATGGTCGAGGTTTGCATTTTACAGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCCTTGGCTATATTATTAAGAAGACTTGAGAATCTCTTTGCAGCAATCTGGATTTATATCATTATATTTTCTATGATGAAAGGAAAGGGAACTACTAATGTTCAGTGGGTGGATCTGTAGCAAGTTTTAATTTGTTGAAGTAGCAAAATTGTTAGGTGGTGTTCAAGAATTTGTAGTTGCTGAATTTGCAAGGTAGCACACTCTTTCTGTAACTTAAAAGAGTTTTTTCTTTTTTTTCTTTTTTTTTTTTTTTCCCATTTTTTCTCCCTCTGCCTCTCTTGCCATCCAACTTGTTATATTTTGTGAAACTGTTGATTTAATAATTTTACATCCCCAATTGTTCAGC GTTTGGGCGGCACGTGTTTTGCTCCTCCCTTCTCTTGTCCGCAGCACGTTCGCCATTGTCCCTCCTCTCTTTTCTCGATCTGTTCGCGAAACTTGCTCTCAAGCAAACTCATTTCCAGATTCTCTTCTCTTCAATCTCTTCCATTTCATCTTCCCTTTTCTGATCCTGCTTCACTCTTCTCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCCTTGGCTATATTATTAAGAAGACTTGAGAATCTCTTTGCAGCAATCTGGATTTATATCATTATATTTTCTATGATGAAAGGAAAGGGAACTACTAATGTTCAGTGGGTGGATCTGTAGCAAGTTTTAATTTGTTGAAGTAGCAAAATTGTTAGGTGGTGTTCAAGAATTTGTAGTTGCTGAATTTGCAAGGTAGCACACTCTTTCTGTAACTTAAAAGAGTTTTTTCTTTTTTTTCTTTTTTTTTTTTTTTCCCATTTTTTCTCCCTCTGCCTCTCTTGCCATCCAACTTGTTATATTTTGTGAAACTGTTGATTTAATAATTTTACATCCCCAATTGTTCAGC ATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCCTTGGCTATATTATTAAGAAGACTTGA MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFLGYIIKKT Homology
BLAST of CcUC01G004250 vs. NCBI nr
Match: XP_008437092.1 (PREDICTED: vesicle-associated protein 1-2 [Cucumis melo] >KAA0039712.1 vesicle-associated protein 1-2 [Cucumis melo var. makuwa]) HSP 1 Score: 448.0 bits (1151), Expect = 5.3e-122 Identity = 232/241 (96.27%), Postives = 237/241 (98.34%), Query Frame = 0
BLAST of CcUC01G004250 vs. NCBI nr
Match: XP_038874712.1 (vesicle-associated protein 1-2 [Benincasa hispida]) HSP 1 Score: 448.0 bits (1151), Expect = 5.3e-122 Identity = 234/241 (97.10%), Postives = 235/241 (97.51%), Query Frame = 0
BLAST of CcUC01G004250 vs. NCBI nr
Match: XP_004152405.1 (vesicle-associated protein 1-2 [Cucumis sativus] >KGN50249.1 hypothetical protein Csa_000538 [Cucumis sativus]) HSP 1 Score: 441.8 bits (1135), Expect = 3.8e-120 Identity = 230/240 (95.83%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of CcUC01G004250 vs. NCBI nr
Match: XP_022154809.1 (vesicle-associated protein 1-2 isoform X2 [Momordica charantia]) HSP 1 Score: 440.7 bits (1132), Expect = 8.4e-120 Identity = 228/241 (94.61%), Postives = 234/241 (97.10%), Query Frame = 0
BLAST of CcUC01G004250 vs. NCBI nr
Match: XP_022922307.1 (vesicle-associated protein 1-2-like isoform X1 [Cucurbita moschata] >XP_023550757.1 vesicle-associated protein 1-2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118 Identity = 227/241 (94.19%), Postives = 231/241 (95.85%), Query Frame = 0
BLAST of CcUC01G004250 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 4.5e-84 Identity = 161/240 (67.08%), Postives = 200/240 (83.33%), Query Frame = 0
BLAST of CcUC01G004250 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 8.0e-81 Identity = 158/243 (65.02%), Postives = 202/243 (83.13%), Query Frame = 0
BLAST of CcUC01G004250 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70 Identity = 144/242 (59.50%), Postives = 190/242 (78.51%), Query Frame = 0
BLAST of CcUC01G004250 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.0e-52 Identity = 102/154 (66.23%), Postives = 126/154 (81.82%), Query Frame = 0
BLAST of CcUC01G004250 vs. ExPASy Swiss-Prot
Match: O82213 (Vesicle-associated protein 3-1 OS=Arabidopsis thaliana OX=3702 GN=PVA31 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 7.3e-42 Identity = 83/126 (65.87%), Postives = 102/126 (80.95%), Query Frame = 0
BLAST of CcUC01G004250 vs. ExPASy TrEMBL
Match: A0A5A7T8A8 (Vesicle-associated protein 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00430 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 2.5e-122 Identity = 232/241 (96.27%), Postives = 237/241 (98.34%), Query Frame = 0
BLAST of CcUC01G004250 vs. ExPASy TrEMBL
Match: A0A1S3ATQ2 (vesicle-associated protein 1-2 OS=Cucumis melo OX=3656 GN=LOC103482614 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 2.5e-122 Identity = 232/241 (96.27%), Postives = 237/241 (98.34%), Query Frame = 0
BLAST of CcUC01G004250 vs. ExPASy TrEMBL
Match: A0A0A0KMX3 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G161980 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 1.8e-120 Identity = 230/240 (95.83%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of CcUC01G004250 vs. ExPASy TrEMBL
Match: A0A6J1DN99 (vesicle-associated protein 1-2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021973 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 4.1e-120 Identity = 228/241 (94.61%), Postives = 234/241 (97.10%), Query Frame = 0
BLAST of CcUC01G004250 vs. ExPASy TrEMBL
Match: A0A6J1DLB2 (vesicle-associated protein 1-2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021973 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118 Identity = 228/242 (94.21%), Postives = 234/242 (96.69%), Query Frame = 0
BLAST of CcUC01G004250 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 ) HSP 1 Score: 312.4 bits (799), Expect = 3.2e-85 Identity = 161/240 (67.08%), Postives = 200/240 (83.33%), Query Frame = 0
BLAST of CcUC01G004250 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein ) HSP 1 Score: 301.6 bits (771), Expect = 5.7e-82 Identity = 158/243 (65.02%), Postives = 202/243 (83.13%), Query Frame = 0
BLAST of CcUC01G004250 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein ) HSP 1 Score: 267.7 bits (683), Expect = 9.1e-72 Identity = 144/242 (59.50%), Postives = 190/242 (78.51%), Query Frame = 0
BLAST of CcUC01G004250 vs. TAIR 10
Match: AT3G60600.3 (vesicle associated protein ) HSP 1 Score: 238.8 bits (608), Expect = 4.5e-63 Identity = 123/175 (70.29%), Postives = 143/175 (81.71%), Query Frame = 0
BLAST of CcUC01G004250 vs. TAIR 10
Match: AT3G60600.2 (vesicle associated protein ) HSP 1 Score: 237.7 bits (605), Expect = 1.0e-62 Identity = 117/154 (75.97%), Postives = 136/154 (88.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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