CcUC01G004000 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G004000
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	thylakoid lumenal protein TL20.3, chloroplastic
Location	CicolChr01: 4052903 .. 4056639 (-)
RNA-Seq Expression	CcUC01G004000
Synteny	CcUC01G004000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATAAACAAGCGAACACGTATTCAAATCCTTAACCAGAAGTTGTATACCTACAGCAAGAAACTGATAAATCTCTTCCTGTCCAATCGTTTTCTTTCCCCTCTTTGCCCTCTTCTCAACTCTTCCAGCGAAATATTTATCTTTCTTGGCGCAGAAAGATCCCCCAATTCCAACTTCTGATGGCACTTTCTTCCATTTTCTCACTATCAGTAAAATGTCTACCCTTATCTTCTTCTAAATCAAAGCTTCCGAGTTCTCTACAACCCAGAAAACAAATTGCCCTGGTCTCTCAAACAAACCTACAAAAGGATCAAACTCAAGGTGAATCATGCTACTCTTTTCTTTCTTATTTCTCTAGTTCTGATGGCGGCTTCTTCCGTCCATGTATGTCCGTGCCTTCACTAACTTGAATTTTCTTGAAAAGGGAAGATTGTTCGGACAGGAAGCACATTGGTAAGATTACAGAGCCCAAGAGATGGCAAAAGTTGGCTTCAACTGCTTTGGCTGCTGCTGCAGTCATTAGTTTTAGCTCAGGCATGCCTTCAGTTGCTGAACTCAACAAATATGAGGCTGATACCCGTGGTGAATTCGGAATTGGATCTGCCGCTCAATTTGGTTCTGCAGATCTCAGGTCTTTAGGCTTTCATGATACCACTTAGTTCTTTTATGCCAAAGTTGTTGAATAACACACTTACTTATACTGATAATCAATGAACTGCTTATATGAACAGGAAAGCAGTGCATGTTAACGAAAATTTCAGGTAGTTTTCCACCCGTTTCATCATTCCTTGGTGTCATGCTGCTTTGATTCTTAAAATCCCTGTTCTGAAACTAATCACAATGGAAGAATTGCAAAGAAACTACAATTTGAATTCAGGACCAAAGGAATACCATTAGGTGAAATGGAGTCTTTAAAGTAACCTCAATCCCCCACCCAATTTACAACATTAGATATATAAAAGAAGTGAAGTCTTTGCTTTGAAATATAACTTCCGGAGCAATCTTATACTTGGTGCTTACTGGTTACCATTGAATCTATATGACTGCTACAGGAGAGCCAATTTCACATCTGCTGATATGAGGGAATCAGATTTCAGCGGCTGTACATTCAACGGCGCATATCTTGAAAAAGCTGTTGCATACAAGACAAATTTCTCAGGTAAGCCTAGTTACTAAATATAGTATGATCATGAATGAAAACGAAACCACTAAACATGAGCTGGTTGAACTTTGTATGGCATAAACTCATTCTGTGGATCTATACATAATATCACAGAAAAACTCAAATCATCGGTCTCAAAGCCCTTTGCCTTCAAGATTTATGTAGGTTGGTAATGATTTAAACATCCTCTTGCCTTGCCTCCACGGGCAATTTGGTGCTGCCATCAAACCCTGCACAACAACCCTTTTTGCCAAAGGTTCAGGGCAAGTTGCAAGTTCTCCTTGCTCGGATTTTAAATTATCAAATCCTCTCGATAACTTTTCCCCCATACTTCCATCTTCATTCCTAGATGTCTTCCTCAGTGGATCCTCCAAAATGTTATGGTCTTCAGACTCTATTCTGCGGGTGATTGAATTAGCTCCAGAGAAACTCTCAGCACTTGATTTATTTGCAACGTTTGTTAATGCTTCATCATAGCAAGCTCGTTTTTTAGCTTTTAAACCATCTTTCTGCAAGCATTTTGAGCCATGTCGAATTCTAACCGGAGGAGCGCCTCTTCCACACCCAGGAGGAAAGCTTCTAATTGCTGAAAAACCCTTCCGAGGTGGATGAAACTTAGGCAAGTTATCGTCAACATGTTCCTTTGGAACATTGGCAATCTCACTCTCGTCTTCAGAAGGACTTAAAACAGTAAGTAAGTCAACTATGGCTGCAGAATCAAGTACTGCATCCTTCATCATTGAAACAAAGTAGTTCTCTGGTTCCAACACCCTAGAAGTTAATCTATGATTCCTATTACACTCCATCAGAAAATGAAGAAGAGCAAAAATCTTTTGTCGCTGGACCTCCATTGACACCTCCGGAGTTGATGACTCCATTCGGAGTTGCTAAATCAAAGCCTAACCATATAACAAAGTAAATAAAACACTTCTAACCAAAACAAGATCAAAACAACTAAATCAAAACAATCTTATTTTTATACAAAGCATTACATTGAAGGAACCAACCAGTGAATCACTTGTTTCTTGACAGACAGGTAGAATAGATTACGAAGATTCAGACGAAAACAAGAATCAACAAAAACAGACAAATAAACACCGCAAAAACAGATAAAACAAGTTAAAGTTTTTTAGAGGCACGATTTACAGAAAAGTGATATTTGAAATAGAATAATACATGGATAGAGTAGAATCTAACCTTTGAATCCAGAAAAGTGATGTTTTATCTTTTCATCAGTATCAATGTGGCCTCTCAGATTCTAGGGTTTGCTGAACCGCTCATTCCTGTACCCTCTCTTTCTTTAGAGCTCCGTTAAAAATTTCCCGCGATACCGGATTCACTGTACCGTACTCAATACGACTTCGCTTTAGGCCGAAAAAGTAAAAAAAGCAAACTCCTTTATTATTTTTTTTTTTTACAATAATATTAAATTTTTTAGTAAATTAACCTTTCCATTATACGGTAAAAAAGTCCTTAAACACGAATAATAATAATAATAATAATAATAATAATAATAATAATAAACAATGAACCCCTTTAAACGTGTAAAATATTTATGGGATTAAGTTAAATTTTTGGTTTTAGTTTTTTTCTTTTATGAAATATCCATCAACCTTGACATTTTTTTCTTTTTGATTTTGTCATTTATATTTTTATAAATTTGATGTATCAACATTTTTGTTTGTATCTATATTTTATACTTTTGTTAAAAAGAAAAAGAAAAGAGTTAATTACGTTTATACCATCTCAACTTTTAATATTATTGCAGGTGCTGATTTGAGCGATACATTGATGGATCGTATGGTAAGATATTTAACTTTTTTTTTTAAGATATAAAATCATTTCAAAATACAAGATTCTATATGTACATATACAAAACAATCGTGTCTTTTGAGATATAATTGATGATTGATTCCTTTAATTATGTTTAGATTGAGAATCATATATTTTTATCAACAACGATAAGAAGGATTAACTTTAGTTTGGGATTATTCAGGTATTAAATGAGGCAAATTTTACGAATGCAGTACTAGTTCGATCAGTGTTGACACGGAGCGATTTAGGCGGTGCCATAATTGTAGGTGCGGACTTTAGTGACGCCGTCATTGACCTTCCTCAGAAGCAAGTTAGTGTACAAAACTTGAGACATATAATATGGAATTAAAATATACAAGTTAAATGATGTGATTAATTAAGTTTTTTAGGCACTTTGCAAGTATGCGAGTGGAACGAACCCAGTGACGGGAGTGAGCACGAGGGCGAGCTTAGGGTGCGGAAACAGCCGTAGAAATGCGTACGGAACGCCGTCGTCTCCTCTGCTCAGCGCACCGCCGCAGCAGCTGCTTGATCGCGACGGTTTCTGCGACCAAGGCACTGGCCTTTGTGAGGCCACTAAATAGATACATAAATACTTGGAGGGCTCTTCTCGAGAAGTGTTGATTGGTTTGTATATACGCTTTTAGATGGCAAATACCACAGCATAAATTAATTACTGTTTTTTTTTTTTTTATTTTATTTTCTTTAAATTTTTTATTACAACATGTGTGAAAGTGACAGTGGATAAATAAATATGAGT

mRNA sequence

AAAATAAACAAGCGAACACGTATTCAAATCCTTAACCAGAAGTTGTATACCTACAGCAAGAAACTGATAAATCTCTTCCTGTCCAATCGTTTTCTTTCCCCTCTTTGCCCTCTTCTCAACTCTTCCAGCGAAATATTTATCTTTCTTGGCGCAGAAAGATCCCCCAATTCCAACTTCTGATGGCACTTTCTTCCATTTTCTCACTATCAGTAAAATGTCTACCCTTATCTTCTTCTAAATCAAAGCTTCCGAGTTCTCTACAACCCAGAAAACAAATTGCCCTGGTCTCTCAAACAAACCTACAAAAGGATCAAACTCAAGATTGTTCGGACAGGAAGCACATTGGTAAGATTACAGAGCCCAAGAGATGGCAAAAGTTGGCTTCAACTGCTTTGGCTGCTGCTGCAGTCATTAGTTTTAGCTCAGGCATGCCTTCAGTTGCTGAACTCAACAAATATGAGGCTGATACCCGTGGTGAATTCGGAATTGGATCTGCCGCTCAATTTGGTTCTGCAGATCTCAGGAAAGCAGTGCATGTTAACGAAAATTTCAGGAGAGCCAATTTCACATCTGCTGATATGAGGGAATCAGATTTCAGCGGCTGTACATTCAACGGCGCATATCTTGAAAAAGCTGTTGCATACAAGACAAATTTCTCAGGTGCTGATTTGAGCGATACATTGATGGATCGTATGGTATTAAATGAGGCAAATTTTACGAATGCAGTACTAGTTCGATCAGTGTTGACACGGAGCGATTTAGGCGGTGCCATAATTGTAGGTGCGGACTTTAGTGACGCCGTCATTGACCTTCCTCAGAAGCAAGCACTTTGCAAGTATGCGAGTGGAACGAACCCAGTGACGGGAGTGAGCACGAGGGCGAGCTTAGGGTGCGGAAACAGCCGTAGAAATGCGTACGGAACGCCGTCGTCTCCTCTGCTCAGCGCACCGCCGCAGCAGCTGCTTGATCGCGACGGTTTCTGCGACCAAGGCACTGGCCTTTGTGAGGCCACTAAATAGATACATAAATACTTGGAGGGCTCTTCTCGAGAAGTGTTGATTGGTTTGTATATACGCTTTTAGATGGCAAATACCACAGCATAAATTAATTACTGTTTTTTTTTTTTTTATTTTATTTTCTTTAAATTTTTTATTACAACATGTGTGAAAGTGACAGTGGATAAATAAATATGAGT

Coding sequence (CDS)

ATGGCACTTTCTTCCATTTTCTCACTATCAGTAAAATGTCTACCCTTATCTTCTTCTAAATCAAAGCTTCCGAGTTCTCTACAACCCAGAAAACAAATTGCCCTGGTCTCTCAAACAAACCTACAAAAGGATCAAACTCAAGATTGTTCGGACAGGAAGCACATTGGTAAGATTACAGAGCCCAAGAGATGGCAAAAGTTGGCTTCAACTGCTTTGGCTGCTGCTGCAGTCATTAGTTTTAGCTCAGGCATGCCTTCAGTTGCTGAACTCAACAAATATGAGGCTGATACCCGTGGTGAATTCGGAATTGGATCTGCCGCTCAATTTGGTTCTGCAGATCTCAGGAAAGCAGTGCATGTTAACGAAAATTTCAGGAGAGCCAATTTCACATCTGCTGATATGAGGGAATCAGATTTCAGCGGCTGTACATTCAACGGCGCATATCTTGAAAAAGCTGTTGCATACAAGACAAATTTCTCAGGTGCTGATTTGAGCGATACATTGATGGATCGTATGGTATTAAATGAGGCAAATTTTACGAATGCAGTACTAGTTCGATCAGTGTTGACACGGAGCGATTTAGGCGGTGCCATAATTGTAGGTGCGGACTTTAGTGACGCCGTCATTGACCTTCCTCAGAAGCAAGCACTTTGCAAGTATGCGAGTGGAACGAACCCAGTGACGGGAGTGAGCACGAGGGCGAGCTTAGGGTGCGGAAACAGCCGTAGAAATGCGTACGGAACGCCGTCGTCTCCTCTGCTCAGCGCACCGCCGCAGCAGCTGCTTGATCGCGACGGTTTCTGCGACCAAGGCACTGGCCTTTGTGAGGCCACTAAATAG

Protein sequence

MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQDCSDRKHIGKITEPKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK

Homology

[Close]

BLAST of CcUC01G004000 vs. NCBI nr
Match: XP_038875985.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 516.9 bits (1330), Expect = 1.1e-142
Identity = 268/279 (96.06%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQDCSDRKHIGKITE 60
           MALSSI SLSVKCLPLSSSKSKLPS LQPRK I+LVSQ N QKDQTQDCS+RKHIGK TE
Sbjct: 1   MALSSISSLSVKCLPLSSSKSKLPSCLQPRKPISLVSQINPQKDQTQDCSERKHIGKSTE 60

Query: 61  PKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120
           PKRWQKL STALAAAAVISFSSGMPS+AELNKYEA+TRGEFGIGSAAQFGSADLRKAVHV
Sbjct: 61  PKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEAETRGEFGIGSAAQFGSADLRKAVHV 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 279

[Close]

BLAST of CcUC01G004000 vs. NCBI nr
Match: XP_004147585.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Cucumis sativus] >KGN50217.1 hypothetical protein Csa_000345 [Cucumis sativus])

HSP 1 Score: 508.8 bits (1309), Expect = 2.9e-140
Identity = 263/279 (94.27%), Postives = 270/279 (96.77%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQDCSDRKHIGKITE 60
           MALSSI SLSVKCLPL+SSKS+ P SLQ RKQI++VSQ N QKDQTQDCS+RKHIGKITE
Sbjct: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60

Query: 61  PKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120
           PKRWQKL STALAAAAVI FSSGMPSVAELNKYEADTRGEFGIGSAAQ+GSADLRKAVH+
Sbjct: 61  PKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQ TGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 279

[Close]

BLAST of CcUC01G004000 vs. NCBI nr
Match: XP_008437129.1 (PREDICTED: thylakoid lumenal protein TL20.3, chloroplastic [Cucumis melo])

HSP 1 Score: 508.4 bits (1308), Expect = 3.8e-140
Identity = 265/281 (94.31%), Postives = 271/281 (96.44%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQDCSDRK--HIGKI 60
           MALSSI SLS KCLPL+SSKSK PSSLQPRK+I+ VSQ N QKDQTQDCS+RK  HIGKI
Sbjct: 1   MALSSISSLSAKCLPLNSSKSKHPSSLQPRKRISTVSQINPQKDQTQDCSERKHAHIGKI 60

Query: 61  TEPKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAV 120
           TEPKRWQKL STALAAAAVI FSSGMPSVAELNKYEADTRGEFGIGSAAQ+GSADLRKAV
Sbjct: 61  TEPKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLRKAV 120

Query: 121 HVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN 180
           H+NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN
Sbjct: 121 HINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN 180

Query: 181 FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 240
           FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC
Sbjct: 181 FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 240

Query: 241 GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 280
           GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK
Sbjct: 241 GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 281

[Close]

BLAST of CcUC01G004000 vs. NCBI nr
Match: XP_038875987.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 508.1 bits (1307), Expect = 5.0e-140
Identity = 266/279 (95.34%), Postives = 270/279 (96.77%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQDCSDRKHIGKITE 60
           MALSSI SLSVKCLPLSSSKSKLPS LQPRK I+LVSQ N QKDQTQDCS+RKHIGK TE
Sbjct: 1   MALSSISSLSVKCLPLSSSKSKLPSCLQPRKPISLVSQINPQKDQTQDCSERKHIGKSTE 60

Query: 61  PKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120
           PKRWQKL STALAAAAVISFSSGMPS+AELNKYEA+TRGEFGIGSAAQFGSADLRKAVHV
Sbjct: 61  PKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEAETRGEFGIGSAAQFGSADLRKAVHV 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFS  DLSDTLMDRMVLNEANFT
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFS--DLSDTLMDRMVLNEANFT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 277

[Close]

BLAST of CcUC01G004000 vs. NCBI nr
Match: XP_022922205.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 507.7 bits (1306), Expect = 6.5e-140
Identity = 260/279 (93.19%), Postives = 270/279 (96.77%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQDCSDRKHIGKITE 60
           MALSS+ SLS+KCLP SSSKSK+PSSLQPRK  ++VSQ NLQKDQTQDCS+RKHIGKI+E
Sbjct: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQDCSERKHIGKISE 60

Query: 61  PKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120
           PKRWQK  STALAAAAVISFSSGMPS+AELNKYEADTRGEFGIGSAAQFGSADLRKAVHV
Sbjct: 61  PKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN T
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLL+RDGFCD+GTGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK 279

[Close]

BLAST of CcUC01G004000 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 8.3e-98
Identity = 200/282 (70.92%), Postives = 230/282 (81.56%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPL---SSSKSKLPSSLQP--RKQIALVSQTNLQ-KDQTQDCSDRKH 60
           MA SS+  L +K L +   SSS S+ P   Q    +++ L S++NL+ KD +   + R+ 
Sbjct: 1   MAFSSLSPLPMKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLEIKDSS---NTREG 60

Query: 61  IGKITEPKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADL 120
                E   W+++ S A+ AAAVI+ SSG+P++AELN++EADTRGEFGIGSAAQ+GSADL
Sbjct: 61  CCSSAESNTWKRILSAAM-AAAVIASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADL 120

Query: 121 RKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVL 180
            K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMVL
Sbjct: 121 SKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVL 180

Query: 181 NEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRA 240
           NEAN TNAVLVRSVLTRSDLGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV TR 
Sbjct: 181 NEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRK 240

Query: 241 SLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCE 277
           SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCD+ TGLC+
Sbjct: 241 SLGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 278

[Close]

BLAST of CcUC01G004000 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.7e-16
Identity = 52/135 (38.52%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 104 GSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGAD 163
           GS+A +    L       ++   A FT+AD+ +S+FS     GA    +     +  GAD
Sbjct: 44  GSSASYEDVKLIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGAD 103

Query: 164 LSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASG 223
           L++ L        A+ TNAVL  +++ R+    A I GADFS AV+D+ +   LC  A G
Sbjct: 104 LTNGLAYLTSFKGADLTNAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADG 163

Query: 224 TNPVTGVSTRASLGC 239
            NP TGVSTR SLGC
Sbjct: 164 VNPKTGVSTRESLGC 178

[Close]

BLAST of CcUC01G004000 vs. ExPASy Swiss-Prot
Match: Q52118 (Uncharacterized protein in mobD 3'region OS=Pantoea stewartii subsp. stewartii OX=66271 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05
Identity = 36/104 (34.62%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 105 SAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKA---VAY--KTNF 164
           S A   +ADL++A   N N   A+ T+A++ ++D      +GA L  A   +AY  + + 
Sbjct: 170 SNANLSNADLKRADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADL 229

Query: 165 SGADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGAD 204
           S A+LS+  + R  L++AN ++A L    L R+DL  AI+ GA+
Sbjct: 230 SNANLSNADLKRADLSDANLSDANLTNVDLKRADLSNAILKGAN 273

[Close]

BLAST of CcUC01G004000 vs. ExPASy Swiss-Prot
Match: P73709 (Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1819 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.1e-04
Identity = 37/105 (35.24%), Postives = 50/105 (47.62%), Query Frame = 0


Query: 105 SAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADL 164
           S A+  + + + A+  + N  R N T      S+ S    N A L +A   K N   A+L
Sbjct: 229 SEAEMTAVNCQGAIMTHVNLNRTNLTG-----SNLSFTRMNSADLSRANLTKANLQEAEL 288

Query: 165 SDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVI 210
            +    R  L EANF NA LV     R+DL  A +VGADF  A +
Sbjct: 289 IEAFFARANLTEANFINANLV-----RADLMSANMVGADFQGATM 323

[Close]

BLAST of CcUC01G004000 vs. ExPASy Swiss-Prot
Match: Q55837 (Uncharacterized protein slr0516 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0516 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.1e-04
Identity = 29/85 (34.12%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 123 NFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFTNA 182
           + R  N  +A +  SD SG   +G  L +A+  + N +GA+LS+T +    L EAN   A
Sbjct: 49  DLREFNLENARLNRSDLSGANLSGVNLRRALLDRANLTGANLSETDLTEAALTEANLAGA 108

Query: 183 VLVRSVLTRSDLGGAIIVGADFSDA 208
            L  + L RS L    + GA+   A
Sbjct: 109 DLSGANLERSFLRDVDLTGANLKGA 133

[Close]

BLAST of CcUC01G004000 vs. ExPASy TrEMBL
Match: A0A0A0KP67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160200 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.4e-140
Identity = 263/279 (94.27%), Postives = 270/279 (96.77%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQDCSDRKHIGKITE 60
           MALSSI SLSVKCLPL+SSKS+ P SLQ RKQI++VSQ N QKDQTQDCS+RKHIGKITE
Sbjct: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQDCSERKHIGKITE 60

Query: 61  PKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120
           PKRWQKL STALAAAAVI FSSGMPSVAELNKYEADTRGEFGIGSAAQ+GSADLRKAVH+
Sbjct: 61  PKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLRKAVHI 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQ TGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 279

[Close]

BLAST of CcUC01G004000 vs. ExPASy TrEMBL
Match: A0A1S3ATE2 (thylakoid lumenal protein TL20.3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482643 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 1.8e-140
Identity = 265/281 (94.31%), Postives = 271/281 (96.44%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQDCSDRK--HIGKI 60
           MALSSI SLS KCLPL+SSKSK PSSLQPRK+I+ VSQ N QKDQTQDCS+RK  HIGKI
Sbjct: 1   MALSSISSLSAKCLPLNSSKSKHPSSLQPRKRISTVSQINPQKDQTQDCSERKHAHIGKI 60

Query: 61  TEPKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAV 120
           TEPKRWQKL STALAAAAVI FSSGMPSVAELNKYEADTRGEFGIGSAAQ+GSADLRKAV
Sbjct: 61  TEPKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLRKAV 120

Query: 121 HVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN 180
           H+NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN
Sbjct: 121 HINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN 180

Query: 181 FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 240
           FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC
Sbjct: 181 FTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 240

Query: 241 GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 280
           GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK
Sbjct: 241 GNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 281

[Close]

BLAST of CcUC01G004000 vs. ExPASy TrEMBL
Match: A0A6J1E828 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430263 PE=4 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 3.1e-140
Identity = 260/279 (93.19%), Postives = 270/279 (96.77%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQDCSDRKHIGKITE 60
           MALSS+ SLS+KCLP SSSKSK+PSSLQPRK  ++VSQ NLQKDQTQDCS+RKHIGKI+E
Sbjct: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQDCSERKHIGKISE 60

Query: 61  PKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120
           PKRWQK  STALAAAAVISFSSGMPS+AELNKYEADTRGEFGIGSAAQFGSADLRKAVHV
Sbjct: 61  PKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN T
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLL+RDGFCD+GTGLCEATK
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK 279

[Close]

BLAST of CcUC01G004000 vs. ExPASy TrEMBL
Match: A0A6J1I174 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468942 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.6e-139
Identity = 259/279 (92.83%), Postives = 270/279 (96.77%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQDCSDRKHIGKITE 60
           MALSS+ SLS+KCLP SSSKSK+PSSLQPRK  ++VSQ NLQK QTQDCS+RKHIGKI+E
Sbjct: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKPFSIVSQVNLQKGQTQDCSERKHIGKISE 60

Query: 61  PKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120
           PKRWQKL STALAAAAVISFSSGMPS+AELNKYEADTRGEFGIGSAAQFGSADLRKAVHV
Sbjct: 61  PKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHV 120

Query: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFT 180
           NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEAN T
Sbjct: 121 NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLT 180

Query: 181 NAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240
           NAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN
Sbjct: 181 NAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGN 240

Query: 241 SRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 280
           SRRNAYGTPSSPLLSAPPQQLL+RDGFCD+GTGLCEA+K
Sbjct: 241 SRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEASK 279

[Close]

BLAST of CcUC01G004000 vs. ExPASy TrEMBL
Match: A0A6J1E2Q9 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430263 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 260/282 (92.20%), Postives = 270/282 (95.74%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPLSSSKSKLPSSLQPRKQIALVSQTNLQKDQTQ---DCSDRKHIGK 60
           MALSS+ SLS+KCLP SSSKSK+PSSLQPRK  ++VSQ NLQKDQTQ   DCS+RKHIGK
Sbjct: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKSFSIVSQVNLQKDQTQGEYDCSERKHIGK 60

Query: 61  ITEPKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
           I+EPKRWQK  STALAAAAVISFSSGMPS+AELNKYEADTRGEFGIGSAAQFGSADLRKA
Sbjct: 61  ISEPKRWQKWVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           N TNAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 280
           CGNSRRNAYGTPSSPLLSAPPQQLL+RDGFCD+GTGLCEATK
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEATK 282

[Close]

BLAST of CcUC01G004000 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 358.2 bits (918), Expect = 5.9e-99
Identity = 200/282 (70.92%), Postives = 230/282 (81.56%), Query Frame = 0


Query: 1   MALSSIFSLSVKCLPL---SSSKSKLPSSLQP--RKQIALVSQTNLQ-KDQTQDCSDRKH 60
           MA SS+  L +K L +   SSS S+ P   Q    +++ L S++NL+ KD +   + R+ 
Sbjct: 1   MAFSSLSPLPMKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLEIKDSS---NTREG 60

Query: 61  IGKITEPKRWQKLASTALAAAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADL 120
                E   W+++ S A+ AAAVI+ SSG+P++AELN++EADTRGEFGIGSAAQ+GSADL
Sbjct: 61  CCSSAESNTWKRILSAAM-AAAVIASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADL 120

Query: 121 RKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVL 180
            K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMVL
Sbjct: 121 SKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVL 180

Query: 181 NEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRA 240
           NEAN TNAVLVRSVLTRSDLGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV TR 
Sbjct: 181 NEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRK 240

Query: 241 SLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCE 277
           SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCD+ TGLC+
Sbjct: 241 SLGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 278

[Close]

BLAST of CcUC01G004000 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 347.8 bits (891), Expect = 8.0e-96
Identity = 176/203 (86.70%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 74  AAAVISFSSGMPSVAELNKYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSAD 133
           AAAVI+ SSG+P++AELN++EADTRGEFGIGSAAQ+GSADL K VH NENFRRANFTSAD
Sbjct: 2   AAAVIASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSAD 61

Query: 134 MRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFTNAVLVRSVLTRSD 193
           MRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMDRMVLNEAN TNAVLVRSVLTRSD
Sbjct: 62  MRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSD 121

Query: 194 LGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPL 253
           LGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV TR SLGCGNSRRNAYG+PSSPL
Sbjct: 122 LGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGCGNSRRNAYGSPSSPL 181

Query: 254 LSAPPQQLLDRDGFCDQGTGLCE 277
           LSAPPQ+LL RDGFCD+ TGLC+
Sbjct: 182 LSAPPQRLLGRDGFCDEKTGLCD 204

[Close]

BLAST of CcUC01G004000 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.2e-04
Identity = 43/175 (24.57%), Postives = 75/175 (42.86%), Query Frame = 0


Query: 68  ASTALAAAAVISFSSGMPSVA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--N 127
           A T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N
Sbjct: 65  ACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFCDYTNDQTN 124

Query: 128 FRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFTNAV 187
            +    ++A M  + F G       + KA A + +F G + ++ ++DR+   ++N   AV
Sbjct: 125 LKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLKGAV 184

Query: 188 LVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 239
              +VL+ S    A +    F D +I     Q +C+     N       R  LGC
Sbjct: 185 FRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR-----NESINEEGRLVLGC 234

[Close]

BLAST of CcUC01G004000 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.2e-04
Identity = 43/175 (24.57%), Postives = 75/175 (42.86%), Query Frame = 0


Query: 68  ASTALAAAAVISFSSGMPSVA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--N 127
           A T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N
Sbjct: 66  ACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFCDYTNDQTN 125

Query: 128 FRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFTNAV 187
            +    ++A M  + F G       + KA A + +F G + ++ ++DR+   ++N   AV
Sbjct: 126 LKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLKGAV 185

Query: 188 LVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 239
              +VL+ S    A +    F D +I     Q +C+     N       R  LGC
Sbjct: 186 FRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR-----NESINEEGRLVLGC 235

[Close]

BLAST of CcUC01G004000 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.2e-04
Identity = 43/175 (24.57%), Postives = 75/175 (42.86%), Query Frame = 0


Query: 68  ASTALAAAAVISFSSGMPSVA-ELNKYE-ADTRGEFGIGSAAQFGSADLRKAVHVNE--N 127
           A T   A+ VI+ +  +P ++ E ++ E A      G  +       DLR   + N+  N
Sbjct: 80  ACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFCDYTNDQTN 139

Query: 128 FRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANFTNAV 187
            +    ++A M  + F G       + KA A + +F G + ++ ++DR+   ++N   AV
Sbjct: 140 LKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFGKSNLKGAV 199

Query: 188 LVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 239
              +VL+ S    A +    F D +I     Q +C+     N       R  LGC
Sbjct: 200 FRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR-----NESINEEGRLVLGC 249

The following BLAST results are available for this feature:

BLAST of CcUC01G004000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875985.1	1.1e-142	96.06	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_004147585.1	2.9e-140	94.27	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Cucumis sativus] >KG...	[more]
XP_008437129.1	3.8e-140	94.31	PREDICTED: thylakoid lumenal protein TL20.3, chloroplastic [Cucumis melo]	[more]
XP_038875987.1	5.0e-140	95.34	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_022922205.1	6.5e-140	93.19	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Cucurbita moschata]	[more]

BLAST of CcUC01G004000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1Q1	8.3e-98	70.92	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
B1WVN5	4.7e-16	38.52	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
Q52118	2.2e-05	34.62	Uncharacterized protein in mobD 3'region OS=Pantoea stewartii subsp. stewartii O...	[more]
P73709	3.1e-04	35.24	Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
Q55837	3.1e-04	34.12	Uncharacterized protein slr0516 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]

BLAST of CcUC01G004000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP67	1.4e-140	94.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160200 PE=4 SV=1	[more]
A0A1S3ATE2	1.8e-140	94.31	thylakoid lumenal protein TL20.3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1E828	3.1e-140	93.19	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1I174	1.6e-139	92.83	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Cucurbita maxima O...	[more]
A0A6J1E2Q9	1.3e-138	92.20	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 OS=Cucurbita moschata...	[more]

BLAST of CcUC01G004000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12250.1	5.9e-99	70.92	Pentapeptide repeat-containing protein	[more]
AT1G12250.2	8.0e-96	86.70	Pentapeptide repeat-containing protein	[more]
AT5G53490.2	4.2e-04	24.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.1	4.2e-04	24.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.3	4.2e-04	24.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 132..168 e-value: 7.8E-9 score: 35.0 coord: 174..206 e-value: 2.6E-6 score: 26.9
None	No IPR available	GENE3D	2.160.20.80		coord: 103..246 e-value: 6.7E-27 score: 95.4
None	No IPR available	PANTHER	PTHR47121	THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC	coord: 3..277
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 108..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G004000.1	CcUC01G004000.1	mRNA