Homology
BLAST of CcUC01G003740 vs. NCBI nr
Match:
XP_038906935.1 (pentatricopeptide repeat-containing protein At4g22760 [Benincasa hispida])
HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 536/578 (92.73%), Postives = 550/578 (95.16%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
MLASELKV LN S+N KQATQIHA+ILVNGLPNLESCLVRQ+TRSEFTCARIVS YLQ+I
Sbjct: 1 MLASELKVFLNSSINFKQATQIHAHILVNGLPNLESCLVRQITRSEFTCARIVSLYLQQI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
LHHSQNPDAFTWAC VRFFSQNG FMEAI+HYVQMQRLGLHP TFAVSSTLRACGRIMCK
Sbjct: 61 LHHSQNPDAFTWACAVRFFSQNGQFMEAISHYVQMQRLGLHPGTFAVSSTLRACGRIMCK 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
FGGSYVH QVYK GFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGSYVHAQVYKFGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
VKIGNLVDAQKVFD MP+KDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS
Sbjct: 181 VKIGNLVDAQKVFDEMPLKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAM 336
GYVNCGD+KSAR LFDVMPNRNNVS ITLIAGYSKLGEVNSA ELFDKMGEKELLSFNAM
Sbjct: 241 GYVNCGDIKSARNLFDVMPNRNNVSWITLIAGYSKLGEVNSAYELFDKMGEKELLSFNAM 300
Query: 337 IACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKL 396
IACYSQNSLPNKALELFNQMLQP VNIQPDEMTFASIISACTQLGN+N GTWIESYMEKL
Sbjct: 301 IACYSQNSLPNKALELFNQMLQPDVNIQPDEMTFASIISACTQLGNLNCGTWIESYMEKL 360
Query: 397 GIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLF 456
GIELDDHLATALVDLYAKSGNIERA ELFNGL+KRDL+AYSAMIFGCGINGKAY+AIRLF
Sbjct: 361 GIELDDHLATALVDLYAKSGNIERAFELFNGLKKRDLIAYSAMIFGCGINGKAYKAIRLF 420
Query: 457 KEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLGRA 516
KEML VNI PNLVTYAGLLTAYNH GLVDEGYLCFS MKDHGLE +ADHYGIMVDLLGRA
Sbjct: 421 KEMLSVNICPNLVTYAGLLTAYNHGGLVDEGYLCFSSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 517 GRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLA 576
GRLEEAYE+I SMPVQPNAGVWGALLHACKLHNNVELGEIAA+N K VTDT GYRSLLA
Sbjct: 481 GRLEEAYEIIQSMPVQPNAGVWGALLHACKLHNNVELGEIAAQNSLKSVTDTTGYRSLLA 540
Query: 577 NIYSSMERWDDAKRLRKAMGNKVFAKISGCSWMEQLES 615
NIYSSMERWDDAKRLRKAMGNKVF KISGCSWMEQ ES
Sbjct: 541 NIYSSMERWDDAKRLRKAMGNKVFVKISGCSWMEQSES 578
BLAST of CcUC01G003740 vs. NCBI nr
Match:
XP_008437157.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g22760 [Cucumis melo])
HSP 1 Score: 1084.7 bits (2804), Expect = 0.0e+00
Identity = 530/580 (91.38%), Postives = 551/580 (95.00%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
ML S+LK LN SV+VKQATQIHA+ILVNGLPNLESCLVRQ+TRS+FTCARIVSRYLQRI
Sbjct: 1 MLGSDLKFFLNSSVHVKQATQIHAHILVNGLPNLESCLVRQITRSQFTCARIVSRYLQRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
LHHSQNPDAFTW+C VRFFS+NG FMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK
Sbjct: 61 LHHSQNPDAFTWSCAVRFFSKNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
FGG +H QVYKLGFCRCVYVQT+LVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGRCIHAQVYKLGFCRCVYVQTSLVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
VKIGNLVDAQKVFD MPVKDVISWNSMLTGF+NSGNMDRA CLFQQM EKSSASWNAMIS
Sbjct: 181 VKIGNLVDAQKVFDEMPVKDVISWNSMLTGFSNSGNMDRALCLFQQMREKSSASWNAMIS 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMG--EKELLSFN 336
GYVNCGDMK+AR LFDVMPNRNNV+RITLIAGYSKLGEVNSACELFDKMG EKEL SFN
Sbjct: 241 GYVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSACELFDKMGENEKELFSFN 300
Query: 337 AMIACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYME 396
AMIACYSQN LPNKALELFNQMLQPH+NIQPDEMTFAS+ISACTQLGN++YGTWIESYME
Sbjct: 301 AMIACYSQNGLPNKALELFNQMLQPHLNIQPDEMTFASVISACTQLGNLSYGTWIESYME 360
Query: 397 KLGIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIR 456
KLGIELDDHLATALVDLYAKSGNI+RA ELFN L+KRDLVAYSAMIFGCGINGKA+EAI
Sbjct: 361 KLGIELDDHLATALVDLYAKSGNIDRAFELFNDLKKRDLVAYSAMIFGCGINGKAHEAIG 420
Query: 457 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLG 516
LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGY CFS MKDHGL +ADHYGIMVDLLG
Sbjct: 421 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYFCFSSMKDHGLAPLADHYGIMVDLLG 480
Query: 517 RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSL 576
RAGRLEEAYELI SMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSK VTDT GYRSL
Sbjct: 481 RAGRLEEAYELIRSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKSVTDTTGYRSL 540
Query: 577 LANIYSSMERWDDAKRLRKAMGNKVFAKISGCSWMEQLES 615
LANIYSSMERWDDAKR+RKAM NKVFAKISGCSWMEQ ES
Sbjct: 541 LANIYSSMERWDDAKRMRKAMSNKVFAKISGCSWMEQSES 580
BLAST of CcUC01G003740 vs. NCBI nr
Match:
XP_004147606.1 (pentatricopeptide repeat-containing protein At4g22760 [Cucumis sativus] >XP_031741502.1 pentatricopeptide repeat-containing protein At4g22760 [Cucumis sativus] >XP_031741503.1 pentatricopeptide repeat-containing protein At4g22760 [Cucumis sativus] >KGN50191.1 hypothetical protein Csa_000399 [Cucumis sativus])
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 530/580 (91.38%), Postives = 550/580 (94.83%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
ML S+LK LN SV+VKQATQIHA ILVNGLPNLESCLVRQ+TRS+FTCARIVSRYLQRI
Sbjct: 1 MLGSDLKFFLNSSVHVKQATQIHAQILVNGLPNLESCLVRQITRSQFTCARIVSRYLQRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
LHHS+NPDAFTWAC VRFFSQNG FMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK
Sbjct: 61 LHHSRNPDAFTWACAVRFFSQNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
F G +H QVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFD+MTEKNVVSWNSILSGY
Sbjct: 121 FRGWCIHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDEMTEKNVVSWNSILSGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
VKIGNLVDAQK+FD MPVKD ISWNSMLTGF+NSGNMDRA CLFQQMGEKSSASWNAMI
Sbjct: 181 VKIGNLVDAQKLFDEMPVKDAISWNSMLTGFSNSGNMDRACCLFQQMGEKSSASWNAMIG 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKM--GEKELLSFN 336
GYVNCGDMK+AR LFDVMPNRNNV+RITLIAGYSKLGEVNSA ELFDKM EKELLSFN
Sbjct: 241 GYVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSAYELFDKMEESEKELLSFN 300
Query: 337 AMIACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYME 396
AMIACYSQNS+PNKALELFN MLQPHVNIQPDEMTFAS+ISACTQLGN++YGTWIESYME
Sbjct: 301 AMIACYSQNSMPNKALELFNLMLQPHVNIQPDEMTFASVISACTQLGNLSYGTWIESYME 360
Query: 397 KLGIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIR 456
KLGIELDDHLATALVDLYAKSGNI RA ELFNGL+KRDLVAYSAMIFGCGIN KA+EAIR
Sbjct: 361 KLGIELDDHLATALVDLYAKSGNINRAFELFNGLKKRDLVAYSAMIFGCGINSKAHEAIR 420
Query: 457 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLG 516
LFKEMLRVNI PNLVTYAGLLTAYNHAGLVDEGYLCFS MKDHGL +ADHYGIMVDLLG
Sbjct: 421 LFKEMLRVNICPNLVTYAGLLTAYNHAGLVDEGYLCFSSMKDHGLAPLADHYGIMVDLLG 480
Query: 517 RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSL 576
RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDT GYRSL
Sbjct: 481 RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTTGYRSL 540
Query: 577 LANIYSSMERWDDAKRLRKAMGNKVFAKISGCSWMEQLES 615
LANIYSSMERWDDAKR+RKAMGNK+FAKISGCSWMEQ ES
Sbjct: 541 LANIYSSMERWDDAKRMRKAMGNKIFAKISGCSWMEQSES 580
BLAST of CcUC01G003740 vs. NCBI nr
Match:
KAA0042843.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 528/580 (91.03%), Postives = 550/580 (94.83%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
ML S+LK LN SV+VKQATQIHA+ILVNGLPNLESCLVRQ+TRS+FTCARIVSRYLQRI
Sbjct: 1 MLGSDLKFFLNSSVHVKQATQIHAHILVNGLPNLESCLVRQITRSQFTCARIVSRYLQRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
LHHSQNPDAFTW+C VRFFS+NG FMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK
Sbjct: 61 LHHSQNPDAFTWSCAVRFFSKNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
FGG +H QVYKLGFCRCVYVQT+LVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGRCIHAQVYKLGFCRCVYVQTSLVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
VKIGNLVDAQKVFD MPVKDVISWNSMLTGF+NSGNMDRA CLFQQM EKSSASWNAMIS
Sbjct: 181 VKIGNLVDAQKVFDEMPVKDVISWNSMLTGFSNSGNMDRALCLFQQMREKSSASWNAMIS 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMG--EKELLSFN 336
GYVNCGDMK+AR LFDVMPNRNNV+RITLIAGYSKLGEVNSACELFDKMG EKEL SFN
Sbjct: 241 GYVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSACELFDKMGENEKELFSFN 300
Query: 337 AMIACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYME 396
AMIACYSQN LPNKALELFNQMLQPH+NIQPDEMTFAS+ISACTQLGN++YGTWIESYME
Sbjct: 301 AMIACYSQNGLPNKALELFNQMLQPHLNIQPDEMTFASVISACTQLGNLSYGTWIESYME 360
Query: 397 KLGIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIR 456
KLGIELDDHLATALVDLYAKSGNI+RA ELFN L+KRDLVAYSAMIFGCGINGKA+EAI
Sbjct: 361 KLGIELDDHLATALVDLYAKSGNIDRAFELFNDLKKRDLVAYSAMIFGCGINGKAHEAIG 420
Query: 457 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLG 516
LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGY CFS MKDHGL +ADHYGIMVDLLG
Sbjct: 421 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYFCFSSMKDHGLAPLADHYGIMVDLLG 480
Query: 517 RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSL 576
RAGRL+EAYELI SMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSK VTDT GYRSL
Sbjct: 481 RAGRLKEAYELIRSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKSVTDTTGYRSL 540
Query: 577 LANIYSSMERWDDAKRLRKAMGNKVFAKISGCSWMEQLES 615
LANIYSSMERWDDAK +RKAM NKVFAKISGCSWMEQ ES
Sbjct: 541 LANIYSSMERWDDAKSMRKAMSNKVFAKISGCSWMEQSES 580
BLAST of CcUC01G003740 vs. NCBI nr
Match:
KAG6579446.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016919.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1061.6 bits (2744), Expect = 2.6e-306
Identity = 515/577 (89.25%), Postives = 545/577 (94.45%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
MLASELK+ LN+ VNVKQATQIHA+ILVNGL NLESCLVRQ+TRSEFTCARIVSRYLQRI
Sbjct: 1 MLASELKIFLNKPVNVKQATQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
L HS+NPD F+W C VRFFSQNG FMEAI+HYVQMQRLGLHPSTFAVSSTLRACGRI+CK
Sbjct: 61 LRHSKNPDYFSWGCAVRFFSQNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
F GS VH QVYKLGFCRCVYVQTALVDFYSKLGDMGFA+KVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
VKIGNL DAQKVFD MPVKDVISWNSMLTGFANSGNMDRA CLFQQ+GE+SSASWNAMIS
Sbjct: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAM 336
GYVNCGDMKSAR +FD MPNRNNVS ITLIAGYSKLGEV SACELF+ MGEKE+LS+NAM
Sbjct: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
Query: 337 IACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKL 396
IACYSQN +PN+AL+LFNQMLQPHVNIQPDEMTFASIISACTQLGN+NYG WIESYMEKL
Sbjct: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
Query: 397 GIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLF 456
GIELDDHLATALVD YAKSGNIERA ELFN L+K+DLV+YSAMIFGCGINGKA+EAIRLF
Sbjct: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
Query: 457 KEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLGRA 516
+EML VNI PNLVTYAGLLT+YNHAGLVDEGY+CF MKDHGLE +ADHYGIMVDLLGRA
Sbjct: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 517 GRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLA 576
GRLEEA+ELI SMPVQPNAGVWGALLHAC+LHNNVELGEIAARNCSKLVTDT GYRSLLA
Sbjct: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
Query: 577 NIYSSMERWDDAKRLRKAMGNKVFAKISGCSWMEQLE 614
NIYSS+ERWDDAKRLRKAMGNKVFAKISGCSWMEQ E
Sbjct: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSE 577
BLAST of CcUC01G003740 vs. ExPASy Swiss-Prot
Match:
P0C8Q5 (Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E6 PE=2 SV=1)
HSP 1 Score: 631.7 bits (1628), Expect = 8.6e-180
Identity = 311/574 (54.18%), Postives = 404/574 (70.38%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
ML S+L+ L R V ++QA Q+HA ++VN +LE LV Q +R + Y++RI
Sbjct: 1 MLDSKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
L D+F+W C VRF SQ+ F E + Y+ M G+ PS+ AV+S LRACG++
Sbjct: 61 LKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENM 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
G +H Q K G C CVYVQT LV YS+LG + A+K FDD+ EKN VSWNS+L GY
Sbjct: 121 VDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
++ G L +A++VFD +P KD +SWN +++ +A G+M A LF M KS ASWN +I
Sbjct: 181 LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIG 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAM 336
GYVNC +MK AR FD MP +N VS IT+I+GY+KLG+V SA ELF M +K+ L ++AM
Sbjct: 241 GYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAM 300
Query: 337 IACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKL 396
IACY+QN P AL+LF QML+ + IQPDE+T +S++SA +QLGN ++GTW+ESY+ +
Sbjct: 301 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEH 360
Query: 397 GIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLF 456
GI++DD L+T+L+DLY K G+ +A ++F+ L K+D V+YSAMI GCGING A EA LF
Sbjct: 361 GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLF 420
Query: 457 KEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLGRA 516
M+ I PN+VT+ GLL+AY+H+GLV EGY CF+ MKDH LE ADHYGIMVD+LGRA
Sbjct: 421 TAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRA 480
Query: 517 GRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLA 576
GRLEEAYELI SMP+QPNAGVWGALL A LHNNVE GEIA +C KL TD GY S LA
Sbjct: 481 GRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLA 540
Query: 577 NIYSSMERWDDAKRLRKAMGNKVFAKISGCSWME 611
IYSS+ RWDDA+ +R ++ K K GCSW+E
Sbjct: 541 MIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
BLAST of CcUC01G003740 vs. ExPASy Swiss-Prot
Match:
O22137 (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR4 PE=1 SV=2)
HSP 1 Score: 363.6 bits (932), Expect = 4.4e-99
Identity = 191/511 (37.38%), Postives = 303/511 (59.30%), Query Frame = 0
Query: 104 DAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFGGSYVH 163
D F W ++ S +A+ M G+ F++S L+AC R+ GG +H
Sbjct: 85 DPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIH 144
Query: 164 TQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGYVKIGNLV 223
+ K G +++Q L+ Y K G +G ++++FD M +++ VS+NS++ GYVK G +V
Sbjct: 145 GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 224 DAQKVFDVMP--VKDVISWNSMLTGFA-NSGNMDRAWCLFQQMGEKSSASWNAMISGYVN 283
A+++FD+MP +K++ISWNSM++G+A S +D A LF M EK SWN+MI GYV
Sbjct: 205 SARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVK 264
Query: 284 CGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAMIACY 343
G ++ A+ LFDVMP R+ V+ T+I GY+KLG V+ A LFD+M ++++++N+M+A Y
Sbjct: 265 HGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGY 324
Query: 344 SQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKLGIEL 403
QN +ALE+F+ M + ++ PD+ T ++ A QLG ++ + Y+ + L
Sbjct: 325 VQNKYHMEALEIFSDM-EKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYL 384
Query: 404 DDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLFKEML 463
L AL+D+Y+K G+I+ A+ +F G+E + + ++AMI G I+G A + ++
Sbjct: 385 GGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIE 444
Query: 464 RVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYM-KDHGLEAMADHYGIMVDLLGRAGRL 523
R+++ P+ +T+ G+L A +H+GLV EG LCF M + H +E HYG MVD+L R+G +
Sbjct: 445 RLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI 504
Query: 524 EEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLANIY 583
E A LI MPV+PN +W L AC H E GE+ A++ LL+N+Y
Sbjct: 505 ELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMY 564
Query: 584 SSMERWDDAKRLRKAMGNKVFAKISGCSWME 611
+S W D +R+R M + KI GCSW+E
Sbjct: 565 ASFGMWKDVRRVRTMMKERKIEKIPGCSWIE 594
BLAST of CcUC01G003740 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 360.5 bits (924), Expect = 3.7e-98
Identity = 219/595 (36.81%), Postives = 327/595 (54.96%), Query Frame = 0
Query: 34 PVLMLASELKVLLNRSVNVKQATQIHAYILVNGL---PNLESCLVRQLTRSEFTCARIVS 93
P+L L + K+LL+ QI A +++NGL P S L+ CA S
Sbjct: 55 PLLSLLEKCKLLLH-------LKQIQAQMIINGLILDPFASSRLIA-------FCALSES 114
Query: 94 RYLQ---RILHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGL---HPSTFAVS 153
RYL +IL +NP+ F+W T+R FS++ + E+ Y QM R G P F
Sbjct: 115 RYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYP 174
Query: 154 STLRACGRIMCKFGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEK 213
+ C + G + V KL +V A + ++ GDM A+KVFD+ +
Sbjct: 175 VLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR 234
Query: 214 NVVSWNSILSGYVKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANS----GNMDRAWCLF 273
++VSWN +++GY KIG A V+ +M + V + + G +S G+++R +
Sbjct: 235 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 294
Query: 274 QQMGEKSSASW----NAMISGYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVN 333
+ + E NA++ + CGD+ AR++FD + R VS T+I+GY++ G ++
Sbjct: 295 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 354
Query: 334 SACELFDKMGEKELLSFNAMIACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISA 393
+ +LFD M EK+++ +NAMI Q AL LF +M N +PDE+T +SA
Sbjct: 355 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS--NTKPDEITMIHCLSA 414
Query: 394 CTQLGNMNYGTWIESYMEKLGIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAY 453
C+QLG ++ G WI Y+EK + L+ L T+LVD+YAK GNI A+ +F+G++ R+ + Y
Sbjct: 415 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY 474
Query: 454 SAMIFGCGINGKAYEAIRLFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKD 513
+A+I G ++G A AI F EM+ I+P+ +T+ GLL+A H G++ G FS MK
Sbjct: 475 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS 534
Query: 514 H-GLEAMADHYGIMVDLLGRAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGE 573
L HY IMVDLLGRAG LEEA L+ SMP++ +A VWGALL C++H NVELGE
Sbjct: 535 RFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE 594
Query: 574 IAARNCSKLVTDTAGYRSLLANIYSSMERWDDAKRLRKAMGNKVFAKISGCSWME 611
AA+ +L +G LL +Y W+DAKR R+ M + KI GCS +E
Sbjct: 595 KAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIE 633
BLAST of CcUC01G003740 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 354.8 bits (909), Expect = 2.0e-96
Identity = 198/568 (34.86%), Postives = 317/568 (55.81%), Query Frame = 0
Query: 46 LNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRILHHSQNPDA 105
L + N+ Q Q+HA I+ L + + + +L + C + + R+ + Q P+
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNL-HEDLHIAPKLISALSLCRQ--TNLAVRVFNQVQEPNV 85
Query: 106 FTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFGGSYVHTQ 165
+R +QN +A + +MQR GL F L+AC +H
Sbjct: 86 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 145
Query: 166 VYKLGFCRCVYVQTALVDFYSKLGDMGF--AQKVFDDMTEKNVVSWNSILSGYVKIGNLV 225
+ KLG +YV AL+D YS+ G +G A K+F+ M+E++ VSWNS+L G VK G L
Sbjct: 146 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 205
Query: 226 DAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMISGYVNCGD 285
DA+++FD MP +D+ISWN+ML G+A M +A+ LF++M E+++ SW+ M+ GY GD
Sbjct: 206 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGD 265
Query: 286 MKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAMIACYSQN 345
M+ AR +FD MP + K ++++ +IA Y++
Sbjct: 266 MEMARVMFDKMP-----------------------------LPAKNVVTWTIIIAGYAEK 325
Query: 346 SLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKLGIELDDH 405
L +A L +QM+ ++ D SI++ACT+ G ++ G I S +++ + + +
Sbjct: 326 GLLKEADRLVDQMVAS--GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAY 385
Query: 406 LATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLFKEMLRVN 465
+ AL+D+YAK GN+++A ++FN + K+DLV+++ M+ G G++G EAI LF M R
Sbjct: 386 VLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREG 445
Query: 466 ISPNLVTYAGLLTAYNHAGLVDEGY-LCFSYMKDHGLEAMADHYGIMVDLLGRAGRLEEA 525
I P+ VT+ +L + NHAGL+DEG +S K + L +HYG +VDLLGR GRL+EA
Sbjct: 446 IRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEA 505
Query: 526 YELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLANIYSSM 585
+++ +MP++PN +WGALL AC++HN V++ + N KL G SLL+NIY++
Sbjct: 506 IKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAA 559
Query: 586 ERWDDAKRLRKAMGNKVFAKISGCSWME 611
E W+ +R M + K SG S +E
Sbjct: 566 EDWEGVADIRSKMKSMGVEKPSGASSVE 559
BLAST of CcUC01G003740 vs. ExPASy Swiss-Prot
Match:
Q9FHR3 (Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E37 PE=3 SV=1)
HSP 1 Score: 347.8 bits (891), Expect = 2.5e-94
Identity = 193/558 (34.59%), Postives = 312/558 (55.91%), Query Frame = 0
Query: 57 QIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRILHHSQNPDAFTWACTVRFFS 116
QIHA I+ GL ++ + ++ S + + + Y + +P + W ++ +S
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSL--SYSSSVFERVPSPGTYLWNHLIKGYS 87
Query: 117 QNGHFMEAIAHYVQMQRLGL-HPSTFAVSSTLRACGRIMCKFGGSYVHTQVYKLGFCRCV 176
F E ++ ++M R GL P + ++ C GS VH V ++GF + V
Sbjct: 88 NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDV 147
Query: 177 YVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGYVKIGNLVDAQKVFDVMPVK 236
V T+ VDFY K D+ A+KVF +M E+N VSW +++ YVK G L +A+ +FD+MP
Sbjct: 148 VVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMP-- 207
Query: 237 DVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMISGYVNCGDMKSARKLFDVMP 296
E++ SWNA++ G V GD+ +A+KLFD MP
Sbjct: 208 -----------------------------ERNLGSWNALVDGLVKSGDLVNAKKLFDEMP 267
Query: 297 NRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAMIACYSQNSLPNKALELFNQ 356
R+ +S ++I GY+K G++ SA +LF++ ++ +++A+I Y+QN PN+A ++F++
Sbjct: 268 KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 327
Query: 357 MLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKLGIELDDH-LATALVDLYAK 416
M N++PDE ++SAC+Q+G ++SY+ + + H + AL+D+ AK
Sbjct: 328 MCAK--NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 387
Query: 417 SGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLFKEMLRVNISPNLVTYAGL 476
G+++RA +LF + +RDLV+Y +M+ G I+G EAIRLF++M+ I P+ V + +
Sbjct: 388 CGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVI 447
Query: 477 LTAYNHAGLVDEGYLCFSYM-KDHGLEAMADHYGIMVDLLGRAGRLEEAYELIHSMPVQP 536
L + LV+EG F M K + + A DHY +V+LL R G+L+EAYELI SMP +
Sbjct: 448 LKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 507
Query: 537 NAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLANIYSSMERWDDAKRLRK 596
+A WG+LL C LH N E+ E+ AR+ +L +AG LL+NIY++++RW D LR
Sbjct: 508 HASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 550
Query: 597 AMGNKVFAKISGCSWMEQ 612
M KI G SW+ +
Sbjct: 568 KMNENGITKICGRSWISR 550
BLAST of CcUC01G003740 vs. ExPASy TrEMBL
Match:
A0A1S3ATB6 (pentatricopeptide repeat-containing protein At4g22760 OS=Cucumis melo OX=3656 GN=LOC103482665 PE=4 SV=1)
HSP 1 Score: 1084.7 bits (2804), Expect = 0.0e+00
Identity = 530/580 (91.38%), Postives = 551/580 (95.00%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
ML S+LK LN SV+VKQATQIHA+ILVNGLPNLESCLVRQ+TRS+FTCARIVSRYLQRI
Sbjct: 1 MLGSDLKFFLNSSVHVKQATQIHAHILVNGLPNLESCLVRQITRSQFTCARIVSRYLQRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
LHHSQNPDAFTW+C VRFFS+NG FMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK
Sbjct: 61 LHHSQNPDAFTWSCAVRFFSKNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
FGG +H QVYKLGFCRCVYVQT+LVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGRCIHAQVYKLGFCRCVYVQTSLVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
VKIGNLVDAQKVFD MPVKDVISWNSMLTGF+NSGNMDRA CLFQQM EKSSASWNAMIS
Sbjct: 181 VKIGNLVDAQKVFDEMPVKDVISWNSMLTGFSNSGNMDRALCLFQQMREKSSASWNAMIS 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMG--EKELLSFN 336
GYVNCGDMK+AR LFDVMPNRNNV+RITLIAGYSKLGEVNSACELFDKMG EKEL SFN
Sbjct: 241 GYVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSACELFDKMGENEKELFSFN 300
Query: 337 AMIACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYME 396
AMIACYSQN LPNKALELFNQMLQPH+NIQPDEMTFAS+ISACTQLGN++YGTWIESYME
Sbjct: 301 AMIACYSQNGLPNKALELFNQMLQPHLNIQPDEMTFASVISACTQLGNLSYGTWIESYME 360
Query: 397 KLGIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIR 456
KLGIELDDHLATALVDLYAKSGNI+RA ELFN L+KRDLVAYSAMIFGCGINGKA+EAI
Sbjct: 361 KLGIELDDHLATALVDLYAKSGNIDRAFELFNDLKKRDLVAYSAMIFGCGINGKAHEAIG 420
Query: 457 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLG 516
LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGY CFS MKDHGL +ADHYGIMVDLLG
Sbjct: 421 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYFCFSSMKDHGLAPLADHYGIMVDLLG 480
Query: 517 RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSL 576
RAGRLEEAYELI SMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSK VTDT GYRSL
Sbjct: 481 RAGRLEEAYELIRSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKSVTDTTGYRSL 540
Query: 577 LANIYSSMERWDDAKRLRKAMGNKVFAKISGCSWMEQLES 615
LANIYSSMERWDDAKR+RKAM NKVFAKISGCSWMEQ ES
Sbjct: 541 LANIYSSMERWDDAKRMRKAMSNKVFAKISGCSWMEQSES 580
BLAST of CcUC01G003740 vs. ExPASy TrEMBL
Match:
A0A0A0KR38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157980 PE=4 SV=1)
HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 530/580 (91.38%), Postives = 550/580 (94.83%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
ML S+LK LN SV+VKQATQIHA ILVNGLPNLESCLVRQ+TRS+FTCARIVSRYLQRI
Sbjct: 1 MLGSDLKFFLNSSVHVKQATQIHAQILVNGLPNLESCLVRQITRSQFTCARIVSRYLQRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
LHHS+NPDAFTWAC VRFFSQNG FMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK
Sbjct: 61 LHHSRNPDAFTWACAVRFFSQNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
F G +H QVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFD+MTEKNVVSWNSILSGY
Sbjct: 121 FRGWCIHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDEMTEKNVVSWNSILSGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
VKIGNLVDAQK+FD MPVKD ISWNSMLTGF+NSGNMDRA CLFQQMGEKSSASWNAMI
Sbjct: 181 VKIGNLVDAQKLFDEMPVKDAISWNSMLTGFSNSGNMDRACCLFQQMGEKSSASWNAMIG 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKM--GEKELLSFN 336
GYVNCGDMK+AR LFDVMPNRNNV+RITLIAGYSKLGEVNSA ELFDKM EKELLSFN
Sbjct: 241 GYVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSAYELFDKMEESEKELLSFN 300
Query: 337 AMIACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYME 396
AMIACYSQNS+PNKALELFN MLQPHVNIQPDEMTFAS+ISACTQLGN++YGTWIESYME
Sbjct: 301 AMIACYSQNSMPNKALELFNLMLQPHVNIQPDEMTFASVISACTQLGNLSYGTWIESYME 360
Query: 397 KLGIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIR 456
KLGIELDDHLATALVDLYAKSGNI RA ELFNGL+KRDLVAYSAMIFGCGIN KA+EAIR
Sbjct: 361 KLGIELDDHLATALVDLYAKSGNINRAFELFNGLKKRDLVAYSAMIFGCGINSKAHEAIR 420
Query: 457 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLG 516
LFKEMLRVNI PNLVTYAGLLTAYNHAGLVDEGYLCFS MKDHGL +ADHYGIMVDLLG
Sbjct: 421 LFKEMLRVNICPNLVTYAGLLTAYNHAGLVDEGYLCFSSMKDHGLAPLADHYGIMVDLLG 480
Query: 517 RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSL 576
RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDT GYRSL
Sbjct: 481 RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTTGYRSL 540
Query: 577 LANIYSSMERWDDAKRLRKAMGNKVFAKISGCSWMEQLES 615
LANIYSSMERWDDAKR+RKAMGNK+FAKISGCSWMEQ ES
Sbjct: 541 LANIYSSMERWDDAKRMRKAMGNKIFAKISGCSWMEQSES 580
BLAST of CcUC01G003740 vs. ExPASy TrEMBL
Match:
A0A5A7THR1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003540 PE=4 SV=1)
HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 528/580 (91.03%), Postives = 550/580 (94.83%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
ML S+LK LN SV+VKQATQIHA+ILVNGLPNLESCLVRQ+TRS+FTCARIVSRYLQRI
Sbjct: 1 MLGSDLKFFLNSSVHVKQATQIHAHILVNGLPNLESCLVRQITRSQFTCARIVSRYLQRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
LHHSQNPDAFTW+C VRFFS+NG FMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK
Sbjct: 61 LHHSQNPDAFTWSCAVRFFSKNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
FGG +H QVYKLGFCRCVYVQT+LVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGRCIHAQVYKLGFCRCVYVQTSLVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
VKIGNLVDAQKVFD MPVKDVISWNSMLTGF+NSGNMDRA CLFQQM EKSSASWNAMIS
Sbjct: 181 VKIGNLVDAQKVFDEMPVKDVISWNSMLTGFSNSGNMDRALCLFQQMREKSSASWNAMIS 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMG--EKELLSFN 336
GYVNCGDMK+AR LFDVMPNRNNV+RITLIAGYSKLGEVNSACELFDKMG EKEL SFN
Sbjct: 241 GYVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSACELFDKMGENEKELFSFN 300
Query: 337 AMIACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYME 396
AMIACYSQN LPNKALELFNQMLQPH+NIQPDEMTFAS+ISACTQLGN++YGTWIESYME
Sbjct: 301 AMIACYSQNGLPNKALELFNQMLQPHLNIQPDEMTFASVISACTQLGNLSYGTWIESYME 360
Query: 397 KLGIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIR 456
KLGIELDDHLATALVDLYAKSGNI+RA ELFN L+KRDLVAYSAMIFGCGINGKA+EAI
Sbjct: 361 KLGIELDDHLATALVDLYAKSGNIDRAFELFNDLKKRDLVAYSAMIFGCGINGKAHEAIG 420
Query: 457 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLG 516
LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGY CFS MKDHGL +ADHYGIMVDLLG
Sbjct: 421 LFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYFCFSSMKDHGLAPLADHYGIMVDLLG 480
Query: 517 RAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSL 576
RAGRL+EAYELI SMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSK VTDT GYRSL
Sbjct: 481 RAGRLKEAYELIRSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKSVTDTTGYRSL 540
Query: 577 LANIYSSMERWDDAKRLRKAMGNKVFAKISGCSWMEQLES 615
LANIYSSMERWDDAK +RKAM NKVFAKISGCSWMEQ ES
Sbjct: 541 LANIYSSMERWDDAKSMRKAMSNKVFAKISGCSWMEQSES 580
BLAST of CcUC01G003740 vs. ExPASy TrEMBL
Match:
A0A6J1E2U4 (pentatricopeptide repeat-containing protein At4g22760 OS=Cucurbita moschata OX=3662 GN=LOC111430313 PE=4 SV=1)
HSP 1 Score: 1057.7 bits (2734), Expect = 1.8e-305
Identity = 512/577 (88.73%), Postives = 544/577 (94.28%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
MLASELK+ LN+ VNVKQA QIHA+ILVNGL NLESCLVRQ+TRSEFTCARIVSRYLQRI
Sbjct: 1 MLASELKIFLNKPVNVKQAAQIHAHILVNGLRNLESCLVRQITRSEFTCARIVSRYLQRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
L HSQNPD+F+W C VRFFS+NG FMEAI+HYVQMQRLGLHPSTFAVSSTLRACGRI+CK
Sbjct: 61 LRHSQNPDSFSWGCAVRFFSRNGQFMEAISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
F GS VH QVYKLGFCRCVYVQTALVDFYSKLGDMGFA+KVFDD+TEKNVVSWNSILSGY
Sbjct: 121 FSGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDITEKNVVSWNSILSGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
VKIGNL DAQKVFD MPVKDVISWNSMLTGFANSGNMDRA CLFQQ+GE+SSASWNAMIS
Sbjct: 181 VKIGNLDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAM 336
GYVNCGDMKSAR +FD MPNRNNVS ITLIAGYSKLGEV SACELF+ MGEKE+LS+NAM
Sbjct: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAM 300
Query: 337 IACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKL 396
IACYSQN +PN+AL+LFNQMLQPHVNIQPDEMTFASIISACTQLGN+NYG WIESYMEKL
Sbjct: 301 IACYSQNGMPNEALKLFNQMLQPHVNIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
Query: 397 GIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLF 456
GIELDDHLATALVD YAKSGNIERA ELFN L+K+D V+YSAMIFGCGINGKA+EAIRLF
Sbjct: 361 GIELDDHLATALVDFYAKSGNIERAFELFNDLKKKDFVSYSAMIFGCGINGKAFEAIRLF 420
Query: 457 KEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLGRA 516
+EML VNI PNLVTYAGLLT+YNHAGLVDEGY+CF MKDHGLE +ADHYGIMVDLLGRA
Sbjct: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 517 GRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLA 576
GRLEEA+ELI SMPVQPNAGVWGALLHAC+LHNNVELGEIAARNCSKLVTDT GYRSLLA
Sbjct: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
Query: 577 NIYSSMERWDDAKRLRKAMGNKVFAKISGCSWMEQLE 614
NIYSS+ERWDDAKRLRKAMGNKVFAKISGCSWMEQ E
Sbjct: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSE 577
BLAST of CcUC01G003740 vs. ExPASy TrEMBL
Match:
A0A6J1HXF1 (pentatricopeptide repeat-containing protein At4g22760 OS=Cucurbita maxima OX=3661 GN=LOC111468920 PE=4 SV=1)
HSP 1 Score: 1049.7 bits (2713), Expect = 4.9e-303
Identity = 510/577 (88.39%), Postives = 543/577 (94.11%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
MLASELK+ LN+ VNVKQATQIHA ILVNGL NLESCLVRQ+TRSEF+ ARIVSRYLQRI
Sbjct: 1 MLASELKIFLNKPVNVKQATQIHAQILVNGLRNLESCLVRQITRSEFSRARIVSRYLQRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
L HSQNPD+F+W C VRFFSQNG FME I+HYVQMQRLGLHPSTFAVSSTLRACGRI+CK
Sbjct: 61 LRHSQNPDSFSWGCAVRFFSQNGQFMETISHYVQMQRLGLHPSTFAVSSTLRACGRIICK 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
FGGS VH QVYKLGFCRCVYVQTALVDFYSKLGDMGFA+KVFDDMTEKNVVSWNSILSGY
Sbjct: 121 FGGSSVHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFARKVFDDMTEKNVVSWNSILSGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
VKIG L DAQKVFD MPVKDVISWNSMLTGFANSGNMDRA CLFQQ+GE+SSASWNAMIS
Sbjct: 181 VKIGILDDAQKVFDEMPVKDVISWNSMLTGFANSGNMDRASCLFQQLGERSSASWNAMIS 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAM 336
GYVNCGDMKSAR +FD MPNRNNVS ITLIAGYSKLGEV SACELF+ MGEKE+LS+NA+
Sbjct: 241 GYVNCGDMKSARNMFDEMPNRNNVSWITLIAGYSKLGEVGSACELFNNMGEKEILSYNAL 300
Query: 337 IACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKL 396
IACYSQN +PN+AL+LFNQMLQPHV+IQPDEMTFASIISACTQLGN+NYG WIESYMEKL
Sbjct: 301 IACYSQNGMPNEALKLFNQMLQPHVDIQPDEMTFASIISACTQLGNLNYGAWIESYMEKL 360
Query: 397 GIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLF 456
GIELDDHLATALVD YAKSGNI+RA ELFN L+K+DLV+YSAMIFGCGINGKA+EAIRLF
Sbjct: 361 GIELDDHLATALVDFYAKSGNIKRAFELFNDLKKKDLVSYSAMIFGCGINGKAFEAIRLF 420
Query: 457 KEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLGRA 516
+EML VNI PNLVTYAGLLT+YNHAGLVDEGY+CF MKDHGLE +ADHYGIMVDLLGRA
Sbjct: 421 EEMLSVNICPNLVTYAGLLTSYNHAGLVDEGYVCFLSMKDHGLEPLADHYGIMVDLLGRA 480
Query: 517 GRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLA 576
GRLEEA+ELI SMPVQPNAGVWGALLHAC+LHNNVELGEIAARNCSKLVTDT GYRSLLA
Sbjct: 481 GRLEEAHELIQSMPVQPNAGVWGALLHACRLHNNVELGEIAARNCSKLVTDTTGYRSLLA 540
Query: 577 NIYSSMERWDDAKRLRKAMGNKVFAKISGCSWMEQLE 614
NIYSS+ERWDDAKRLRKAMGNKVFAKISGCSWMEQ E
Sbjct: 541 NIYSSVERWDDAKRLRKAMGNKVFAKISGCSWMEQSE 577
BLAST of CcUC01G003740 vs. TAIR 10
Match:
AT4G22760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 631.7 bits (1628), Expect = 6.1e-181
Identity = 311/574 (54.18%), Postives = 404/574 (70.38%), Query Frame = 0
Query: 37 MLASELKVLLNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRI 96
ML S+L+ L R V ++QA Q+HA ++VN +LE LV Q +R + Y++RI
Sbjct: 1 MLDSKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRI 60
Query: 97 LHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCK 156
L D+F+W C VRF SQ+ F E + Y+ M G+ PS+ AV+S LRACG++
Sbjct: 61 LKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENM 120
Query: 157 FGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGY 216
G +H Q K G C CVYVQT LV YS+LG + A+K FDD+ EKN VSWNS+L GY
Sbjct: 121 VDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGY 180
Query: 217 VKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMIS 276
++ G L +A++VFD +P KD +SWN +++ +A G+M A LF M KS ASWN +I
Sbjct: 181 LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIG 240
Query: 277 GYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAM 336
GYVNC +MK AR FD MP +N VS IT+I+GY+KLG+V SA ELF M +K+ L ++AM
Sbjct: 241 GYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAM 300
Query: 337 IACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKL 396
IACY+QN P AL+LF QML+ + IQPDE+T +S++SA +QLGN ++GTW+ESY+ +
Sbjct: 301 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEH 360
Query: 397 GIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLF 456
GI++DD L+T+L+DLY K G+ +A ++F+ L K+D V+YSAMI GCGING A EA LF
Sbjct: 361 GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLF 420
Query: 457 KEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKDHGLEAMADHYGIMVDLLGRA 516
M+ I PN+VT+ GLL+AY+H+GLV EGY CF+ MKDH LE ADHYGIMVD+LGRA
Sbjct: 421 TAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRA 480
Query: 517 GRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLA 576
GRLEEAYELI SMP+QPNAGVWGALL A LHNNVE GEIA +C KL TD GY S LA
Sbjct: 481 GRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLA 540
Query: 577 NIYSSMERWDDAKRLRKAMGNKVFAKISGCSWME 611
IYSS+ RWDDA+ +R ++ K K GCSW+E
Sbjct: 541 MIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
BLAST of CcUC01G003740 vs. TAIR 10
Match:
AT2G45350.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 363.6 bits (932), Expect = 3.1e-100
Identity = 191/511 (37.38%), Postives = 303/511 (59.30%), Query Frame = 0
Query: 104 DAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFGGSYVH 163
D F W ++ S +A+ M G+ F++S L+AC R+ GG +H
Sbjct: 85 DPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIH 144
Query: 164 TQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGYVKIGNLV 223
+ K G +++Q L+ Y K G +G ++++FD M +++ VS+NS++ GYVK G +V
Sbjct: 145 GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 224 DAQKVFDVMP--VKDVISWNSMLTGFA-NSGNMDRAWCLFQQMGEKSSASWNAMISGYVN 283
A+++FD+MP +K++ISWNSM++G+A S +D A LF M EK SWN+MI GYV
Sbjct: 205 SARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVK 264
Query: 284 CGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAMIACY 343
G ++ A+ LFDVMP R+ V+ T+I GY+KLG V+ A LFD+M ++++++N+M+A Y
Sbjct: 265 HGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGY 324
Query: 344 SQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKLGIEL 403
QN +ALE+F+ M + ++ PD+ T ++ A QLG ++ + Y+ + L
Sbjct: 325 VQNKYHMEALEIFSDM-EKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYL 384
Query: 404 DDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLFKEML 463
L AL+D+Y+K G+I+ A+ +F G+E + + ++AMI G I+G A + ++
Sbjct: 385 GGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIE 444
Query: 464 RVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYM-KDHGLEAMADHYGIMVDLLGRAGRL 523
R+++ P+ +T+ G+L A +H+GLV EG LCF M + H +E HYG MVD+L R+G +
Sbjct: 445 RLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI 504
Query: 524 EEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLANIY 583
E A LI MPV+PN +W L AC H E GE+ A++ LL+N+Y
Sbjct: 505 ELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMY 564
Query: 584 SSMERWDDAKRLRKAMGNKVFAKISGCSWME 611
+S W D +R+R M + KI GCSW+E
Sbjct: 565 ASFGMWKDVRRVRTMMKERKIEKIPGCSWIE 594
BLAST of CcUC01G003740 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 360.5 bits (924), Expect = 2.6e-99
Identity = 219/595 (36.81%), Postives = 327/595 (54.96%), Query Frame = 0
Query: 34 PVLMLASELKVLLNRSVNVKQATQIHAYILVNGL---PNLESCLVRQLTRSEFTCARIVS 93
P+L L + K+LL+ QI A +++NGL P S L+ CA S
Sbjct: 55 PLLSLLEKCKLLLH-------LKQIQAQMIINGLILDPFASSRLIA-------FCALSES 114
Query: 94 RYLQ---RILHHSQNPDAFTWACTVRFFSQNGHFMEAIAHYVQMQRLGL---HPSTFAVS 153
RYL +IL +NP+ F+W T+R FS++ + E+ Y QM R G P F
Sbjct: 115 RYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYP 174
Query: 154 STLRACGRIMCKFGGSYVHTQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDDMTEK 213
+ C + G + V KL +V A + ++ GDM A+KVFD+ +
Sbjct: 175 VLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR 234
Query: 214 NVVSWNSILSGYVKIGNLVDAQKVFDVMPVKDVISWNSMLTGFANS----GNMDRAWCLF 273
++VSWN +++GY KIG A V+ +M + V + + G +S G+++R +
Sbjct: 235 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 294
Query: 274 QQMGEKSSASW----NAMISGYVNCGDMKSARKLFDVMPNRNNVSRITLIAGYSKLGEVN 333
+ + E NA++ + CGD+ AR++FD + R VS T+I+GY++ G ++
Sbjct: 295 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 354
Query: 334 SACELFDKMGEKELLSFNAMIACYSQNSLPNKALELFNQMLQPHVNIQPDEMTFASIISA 393
+ +LFD M EK+++ +NAMI Q AL LF +M N +PDE+T +SA
Sbjct: 355 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS--NTKPDEITMIHCLSA 414
Query: 394 CTQLGNMNYGTWIESYMEKLGIELDDHLATALVDLYAKSGNIERAIELFNGLEKRDLVAY 453
C+QLG ++ G WI Y+EK + L+ L T+LVD+YAK GNI A+ +F+G++ R+ + Y
Sbjct: 415 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY 474
Query: 454 SAMIFGCGINGKAYEAIRLFKEMLRVNISPNLVTYAGLLTAYNHAGLVDEGYLCFSYMKD 513
+A+I G ++G A AI F EM+ I+P+ +T+ GLL+A H G++ G FS MK
Sbjct: 475 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS 534
Query: 514 H-GLEAMADHYGIMVDLLGRAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGE 573
L HY IMVDLLGRAG LEEA L+ SMP++ +A VWGALL C++H NVELGE
Sbjct: 535 RFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE 594
Query: 574 IAARNCSKLVTDTAGYRSLLANIYSSMERWDDAKRLRKAMGNKVFAKISGCSWME 611
AA+ +L +G LL +Y W+DAKR R+ M + KI GCS +E
Sbjct: 595 KAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIE 633
BLAST of CcUC01G003740 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 354.8 bits (909), Expect = 1.4e-97
Identity = 198/568 (34.86%), Postives = 317/568 (55.81%), Query Frame = 0
Query: 46 LNRSVNVKQATQIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRILHHSQNPDA 105
L + N+ Q Q+HA I+ L + + + +L + C + + R+ + Q P+
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNL-HEDLHIAPKLISALSLCRQ--TNLAVRVFNQVQEPNV 85
Query: 106 FTWACTVRFFSQNGHFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFGGSYVHTQ 165
+R +QN +A + +MQR GL F L+AC +H
Sbjct: 86 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 145
Query: 166 VYKLGFCRCVYVQTALVDFYSKLGDMGF--AQKVFDDMTEKNVVSWNSILSGYVKIGNLV 225
+ KLG +YV AL+D YS+ G +G A K+F+ M+E++ VSWNS+L G VK G L
Sbjct: 146 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 205
Query: 226 DAQKVFDVMPVKDVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMISGYVNCGD 285
DA+++FD MP +D+ISWN+ML G+A M +A+ LF++M E+++ SW+ M+ GY GD
Sbjct: 206 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGD 265
Query: 286 MKSARKLFDVMPNRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAMIACYSQN 345
M+ AR +FD MP + K ++++ +IA Y++
Sbjct: 266 MEMARVMFDKMP-----------------------------LPAKNVVTWTIIIAGYAEK 325
Query: 346 SLPNKALELFNQMLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKLGIELDDH 405
L +A L +QM+ ++ D SI++ACT+ G ++ G I S +++ + + +
Sbjct: 326 GLLKEADRLVDQMVAS--GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAY 385
Query: 406 LATALVDLYAKSGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLFKEMLRVN 465
+ AL+D+YAK GN+++A ++FN + K+DLV+++ M+ G G++G EAI LF M R
Sbjct: 386 VLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREG 445
Query: 466 ISPNLVTYAGLLTAYNHAGLVDEGY-LCFSYMKDHGLEAMADHYGIMVDLLGRAGRLEEA 525
I P+ VT+ +L + NHAGL+DEG +S K + L +HYG +VDLLGR GRL+EA
Sbjct: 446 IRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEA 505
Query: 526 YELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLANIYSSM 585
+++ +MP++PN +WGALL AC++HN V++ + N KL G SLL+NIY++
Sbjct: 506 IKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAA 559
Query: 586 ERWDDAKRLRKAMGNKVFAKISGCSWME 611
E W+ +R M + K SG S +E
Sbjct: 566 EDWEGVADIRSKMKSMGVEKPSGASSVE 559
BLAST of CcUC01G003740 vs. TAIR 10
Match:
AT5G37570.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 347.8 bits (891), Expect = 1.8e-95
Identity = 193/558 (34.59%), Postives = 312/558 (55.91%), Query Frame = 0
Query: 57 QIHAYILVNGLPNLESCLVRQLTRSEFTCARIVSRYLQRILHHSQNPDAFTWACTVRFFS 116
QIHA I+ GL ++ + ++ S + + + Y + +P + W ++ +S
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSL--SYSSSVFERVPSPGTYLWNHLIKGYS 87
Query: 117 QNGHFMEAIAHYVQMQRLGL-HPSTFAVSSTLRACGRIMCKFGGSYVHTQVYKLGFCRCV 176
F E ++ ++M R GL P + ++ C GS VH V ++GF + V
Sbjct: 88 NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDV 147
Query: 177 YVQTALVDFYSKLGDMGFAQKVFDDMTEKNVVSWNSILSGYVKIGNLVDAQKVFDVMPVK 236
V T+ VDFY K D+ A+KVF +M E+N VSW +++ YVK G L +A+ +FD+MP
Sbjct: 148 VVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMP-- 207
Query: 237 DVISWNSMLTGFANSGNMDRAWCLFQQMGEKSSASWNAMISGYVNCGDMKSARKLFDVMP 296
E++ SWNA++ G V GD+ +A+KLFD MP
Sbjct: 208 -----------------------------ERNLGSWNALVDGLVKSGDLVNAKKLFDEMP 267
Query: 297 NRNNVSRITLIAGYSKLGEVNSACELFDKMGEKELLSFNAMIACYSQNSLPNKALELFNQ 356
R+ +S ++I GY+K G++ SA +LF++ ++ +++A+I Y+QN PN+A ++F++
Sbjct: 268 KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 327
Query: 357 MLQPHVNIQPDEMTFASIISACTQLGNMNYGTWIESYMEKLGIELDDH-LATALVDLYAK 416
M N++PDE ++SAC+Q+G ++SY+ + + H + AL+D+ AK
Sbjct: 328 MCAK--NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 387
Query: 417 SGNIERAIELFNGLEKRDLVAYSAMIFGCGINGKAYEAIRLFKEMLRVNISPNLVTYAGL 476
G+++RA +LF + +RDLV+Y +M+ G I+G EAIRLF++M+ I P+ V + +
Sbjct: 388 CGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVI 447
Query: 477 LTAYNHAGLVDEGYLCFSYM-KDHGLEAMADHYGIMVDLLGRAGRLEEAYELIHSMPVQP 536
L + LV+EG F M K + + A DHY +V+LL R G+L+EAYELI SMP +
Sbjct: 448 LKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 507
Query: 537 NAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTAGYRSLLANIYSSMERWDDAKRLRK 596
+A WG+LL C LH N E+ E+ AR+ +L +AG LL+NIY++++RW D LR
Sbjct: 508 HASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 550
Query: 597 AMGNKVFAKISGCSWMEQ 612
M KI G SW+ +
Sbjct: 568 KMNENGITKICGRSWISR 550
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038906935.1 | 0.0e+00 | 92.73 | pentatricopeptide repeat-containing protein At4g22760 [Benincasa hispida] | [more] |
XP_008437157.1 | 0.0e+00 | 91.38 | PREDICTED: pentatricopeptide repeat-containing protein At4g22760 [Cucumis melo] | [more] |
XP_004147606.1 | 0.0e+00 | 91.38 | pentatricopeptide repeat-containing protein At4g22760 [Cucumis sativus] >XP_0317... | [more] |
KAA0042843.1 | 0.0e+00 | 91.03 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
KAG6579446.1 | 2.6e-306 | 89.25 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
P0C8Q5 | 8.6e-180 | 54.18 | Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana OX... | [more] |
O22137 | 4.4e-99 | 37.38 | Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidop... | [more] |
Q9SJZ3 | 3.7e-98 | 36.81 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
Q9LS72 | 2.0e-96 | 34.86 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9FHR3 | 2.5e-94 | 34.59 | Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3ATB6 | 0.0e+00 | 91.38 | pentatricopeptide repeat-containing protein At4g22760 OS=Cucumis melo OX=3656 GN... | [more] |
A0A0A0KR38 | 0.0e+00 | 91.38 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157980 PE=4 SV=1 | [more] |
A0A5A7THR1 | 0.0e+00 | 91.03 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1E2U4 | 1.8e-305 | 88.73 | pentatricopeptide repeat-containing protein At4g22760 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1HXF1 | 4.9e-303 | 88.39 | pentatricopeptide repeat-containing protein At4g22760 OS=Cucurbita maxima OX=366... | [more] |