CcUC01G002770 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G002770
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr01: 2618166 .. 2620419 (+)
RNA-Seq ExpressionCcUC01G002770
SyntenyCcUC01G002770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGCGATCATCGTTTCGCGGTTGGGAGAAGAAGCCGTGAGAGAGTCTGAGAGGAGAAGCCAAAAGAATAAGAACTTGATGGCATCACCAATTGTTGATAGCCATGAAAGTATAGCAGTGAGTTCATCATTTTCTGAATTAAAGTAGACCTTAATACGCCACACCCAAAAGATGCATATAGGTTTCAAGAACTTTTTCTATACCAATCAAGGTTTAATTTCAAAACACAATTTCATCCCCTTCCAATAAAAAATTTCAAGAACCAGGATAAGAATTGGGGATTAAAGCCAAAAAGCATCAACAACAAAATTCATATCCCGAATAACAAAACCAAAAAAATAAAAACGATTAAGTCATTAATCAAAACAAAAAAAAAAAATCAATTAAAGAAAAATGAGATCGAGATCGATTTTGGAGTAAAAGAAATCCGCACTAAAGAAACCCACCAGAGGAAAAGAAAAATGTTGAAGTTCCAGGGAGATAGTAAAGAAAAGAAAAGAAGGGGTGAGGATTGATATCTAATTAAAAAGAAAATGGTGTAAAAAGATCACTTCTGTTTAAGTTGTTTACAAAATATTTTATTATAGAAATTATGAAATTTGTATCTTTTGGGCAAAGGATTTCAGTGTGAAGAAGCTGAAAACAGGGAAGGATAATCAAAGATGCTGCGATAGAAAGTGACATCAAGCCAACTAATTGGTTCGCACAAGATGAATTAAGTAGAAAAGGAATCGATGAACGCGTGAATTAAGTAGAAAAGGAATCGATAAACGCGTGGGCAATGAATGTCGTGTAGAAATGCAAGTAGACGATTGATTTGATAAAGTCAATAAACTTGTGATAGCAAAAAAAGTCTGCAATCATGAGGACTACCTTTTTGGACGCTTATAGACCAAGTAGCGAAACCTCTGCCAAAGCTCTTTCACCTCCATCTCCATTTTCATGAGCTTCTATTTGAGGAATTTTGAGTGAGAGCTTAGATTCTCCTCTTAGGAAGTGAGAGTTCATCTTCATCCATCTATGCAATTACTTCAAAATAGCCATCATCAAAGTCTTCGAGAGCAAGACATTGCAACCGGCGGCTCAACATTCTTATTTCTATACTCAATTTTTATTTTCTAGACATTCTCATTTGTATTAAGACAGTGAATTCAATAGACTGATAATTTTTAATATAAATCAGATTGTTGATCATTTTCATTCATCCGTGTTATTATTATTCCTCATCATGGCTAATTGGGTGGATCAAACTAACATTTAACTATTTTTGCATAAGCTTGAGTTATTATTTTTGCATAAGCATGAGTTCACCTTATTTGATGTGCGCTAAAACCTTGTGTGAATCTATTGAACAAATAGATTTAAGTAAAAATAATGAATTGTTTGAGAGAGTAAGTGATTAAAACTTTCATTTAAATAATACAAGAATTAGCTTCAGAGATAAAGTTAGTCTTTCGTCCATAGATAACTTTGCATGCGGAGAGATAAAAGATAAGTGTGGCACAGAAACAGCAGAGGCTTATGCATTATTCAGGAAAATGTTGGTAAACTCCTATCAACTTTATTTTCTCCATTGATTTTTTCAATTATTAACACATGTTATTTGACTATAATTGCACTTAATATTTTCACCATCATCACATTTAATGCATTGTCACTATCCATCTTCACTATCATTTACCACCATTTATAATTAAGTCACCTTAAAAAAAAAAAAATTTCAATGCACTATCGTCAACGCATAATCATTACATTAAACCAACTAAATCCTAACAAAGATGTGTCACAAATTTTTTAGTTCGACTCTAGACTCTCCAAGAACACTAATAAGATTTATACTTGGATTGTACAGAAAAAAACTGACATAAGTATTCAAACTACAAATGCAGCAAGGATAAAGAGGAAAAATGAGAACAAAAGAAAACAAACAGAAAACAGAGGAATGATGATGAGTTGGCAGAGGAGAAGTGTTTTTGGTTTTTTCAAAATTGGTTTATGAGTGATTTTGTTGCTATGGGTTAATCTGTGTGTGTGTGAAGCTGTGAGGGACCTGGGAGAAGAAGCTGGAAAACGATGGGCAACGCGAGTTTAGAGGGAGGAATTGTGCAAGTTGCAGAGGTGGAAAATGTGAAAGAAGACAATGGAGGAAGAGAGAGGATAGATAAAGAGGAAAGAGAAATGAGAGGGAAGAAGAGTAACAGTAAAGGAATTTGGGAGGCGAGGAACATCCAGCGGGGTGAAATCACCTGA

mRNA sequence

ATGGCAGGCGATCATCGTTTCGCGGTTGGGAGAAGAAGCCACCTTAATACGCCACACCCAAAAGATGCATATAGCTGTGAGGGACCTGGGAGAAGAAGCTGGAAAACGATGGGCAACGCGAGTTTAGAGGGAGGAATTGTGCAAGTTGCAGAGGTGGAAAATGTGAAAGAAGACAATGGAGGAAGAGAGAGGATAGATAAAGAGGAAAGAGAAATGAGAGGGAAGAAGAGTAACAGTAAAGGAATTTGGGAGGCGAGGAACATCCAGCGGGGTGAAATCACCTGA

Coding sequence (CDS)

ATGGCAGGCGATCATCGTTTCGCGGTTGGGAGAAGAAGCCACCTTAATACGCCACACCCAAAAGATGCATATAGCTGTGAGGGACCTGGGAGAAGAAGCTGGAAAACGATGGGCAACGCGAGTTTAGAGGGAGGAATTGTGCAAGTTGCAGAGGTGGAAAATGTGAAAGAAGACAATGGAGGAAGAGAGAGGATAGATAAAGAGGAAAGAGAAATGAGAGGGAAGAAGAGTAACAGTAAAGGAATTTGGGAGGCGAGGAACATCCAGCGGGGTGAAATCACCTGA

Protein sequence

MAGDHRFAVGRRSHLNTPHPKDAYSCEGPGRRSWKTMGNASLEGGIVQVAEVENVKEDNGGRERIDKEEREMRGKKSNSKGIWEARNIQRGEIT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G002770.1CcUC01G002770.1mRNA