CcUC01G002470 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G002470
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	heavy metal-associated isoprenylated plant protein 3
Location	CicolChr01: 2321570 .. 2322198 (-)
RNA-Seq Expression	CcUC01G002470
Synteny	CcUC01G002470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTAGTTTGCAGTTTTCGTTGGAGTATATGATTTTAAGTAACAAAAGAATTCTTCTGTATGCAGAGAGTGGTAGTGAAATTGGACTTACATGATGATAGAGGAAAGCAAAAGGCCTTGAAAACAGTATCTGTTCTCCAAGGTAATCACTTAACTCTATCAGCCTAGCTCTTACAAATTTTCATTTTTTTTTTTTTTTCTTTTTCTGACATAATGGAATAATCCAACCTTTTTGATTTTGAGATTGATACAACAGTATACAGTACAAACACCAAGAGTTGAGGTATACTCATTATTTCCCTCTCTTTGGAGATGAAGTAAATTAAAAAAAATTGTTACTTTATTTCAATGGTAGGAATTGAATCAATCGCTATGAACATGAAAGACAAAAAGTTGATAGTGATTGTGGAGATGTAGATCCTGTTGATGTCTTTGCTACGGTTCAAAAGCATTGGCCAAACGTTGACATCGTCAGCATCGGCCCGGCAAAGAAAGAGAAGAAGGACCAAAATGAAAAGATGGAAGAGCTGCTTAAATTGTACATAAAAGCTATGATCGTCATGGTTATGCTCTTAATTATAATGTGTATGGTGAAGAGGAGAATCAAAACTCGTGTCACAAGTTAA

mRNA sequence

ATGAGTTTAAGAGTGGTAGTGAAATTGGACTTACATGATGATAGAGGAAAGCAAAAGGCCTTGAAAACAGTATCTGTTCTCCAAGATCCTGTTGATGTCTTTGCTACGGTTCAAAAGCATTGGCCAAACGTTGACATCGTCAGCATCGGCCCGGCAAAGAAAGAGAAGAAGGACCAAAATGAAAAGATGGAAGAGCTGCTTAAATTGTACATAAAAGCTATGATCGTCATGGTTATGCTCTTAATTATAATGTGTATGGTGAAGAGGAGAATCAAAACTCGTGTCACAAGTTAA

Coding sequence (CDS)

ATGAGTTTAAGAGTGGTAGTGAAATTGGACTTACATGATGATAGAGGAAAGCAAAAGGCCTTGAAAACAGTATCTGTTCTCCAAGATCCTGTTGATGTCTTTGCTACGGTTCAAAAGCATTGGCCAAACGTTGACATCGTCAGCATCGGCCCGGCAAAGAAAGAGAAGAAGGACCAAAATGAAAAGATGGAAGAGCTGCTTAAATTGTACATAAAAGCTATGATCGTCATGGTTATGCTCTTAATTATAATGTGTATGGTGAAGAGGAGAATCAAAACTCGTGTCACAAGTTAA

Protein sequence

MSLRVVVKLDLHDDRGKQKALKTVSVLQDPVDVFATVQKHWPNVDIVSIGPAKKEKKDQNEKMEELLKLYIKAMIVMVMLLIIMCMVKRRIKTRVTS

Homology

[Close]

BLAST of CcUC01G002470 vs. NCBI nr
Match: XP_038875364.1 (heavy metal-associated isoprenylated plant protein 39-like [Benincasa hispida])

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-17
Identity = 55/91 (60.44%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 4  RVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWPN 63
          +VV+KLDLHDDRGKQKALK VSVLQ                    DPVDV   ++KHWPN
Sbjct: 3  KVVLKLDLHDDRGKQKALKVVSVLQGIESIAMDMKDKKLTVIGDVDPVDVITKIRKHWPN 62

Query: 64 VDIVSIGPAKKEKKD----QNEKMEELLKLY 71
           D+VSIGPAK+EKK+    QNEKMEELLKLY
Sbjct: 63 ADVVSIGPAKEEKKEELKNQNEKMEELLKLY 93

[Close]

BLAST of CcUC01G002470 vs. NCBI nr
Match: XP_008437332.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 3 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 51/93 (54.84%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 4  RVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWPN 63
          +VV+KL+LH DR KQKALK+VSVLQ                    DPVDV A V+KHWP+
Sbjct: 3  KVVLKLELHGDREKQKALKSVSVLQGIELIAMDMKDKKLTVIGDVDPVDVVAKVRKHWPD 62

Query: 64 VDIVSIGPAKKEKKDQ------NEKMEELLKLY 71
           DIVSIGPAK+EKK +      ++KMEELLKLY
Sbjct: 63 ADIVSIGPAKEEKKKEEQKNQNDQKMEELLKLY 95

[Close]

BLAST of CcUC01G002470 vs. NCBI nr
Match: XP_004143971.1 (heavy metal-associated isoprenylated plant protein 39 [Cucumis sativus] >KGN50061.1 hypothetical protein Csa_000154 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13
Identity = 50/93 (53.76%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 4  RVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWPN 63
          +VV+KL+LH DR KQKALK+VSVLQ                    DPVDV   V+KHWP+
Sbjct: 3  KVVLKLELHGDREKQKALKSVSVLQGIELIAMDMKDKKLTVIGDVDPVDVVGKVRKHWPD 62

Query: 64 VDIVSIGPAKKEKKDQ------NEKMEELLKLY 71
           DIVSIGPAK+EKK++      ++KMEELLKLY
Sbjct: 63 ADIVSIGPAKEEKKEEQKNQNNDQKMEELLKLY 95

[Close]

BLAST of CcUC01G002470 vs. NCBI nr
Match: XP_004143886.1 (heavy metal-associated isoprenylated plant protein 39 isoform X1 [Cucumis sativus] >KGN50060.1 hypothetical protein Csa_000088 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 2.3e-12
Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 4   RVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWPN 63
           +VVVKLDLHDD+GKQKALK+VS LQ                    DPVDV   V+KHWPN
Sbjct: 3   KVVVKLDLHDDKGKQKALKSVSGLQGIESIAMDMKDKKLTVIGDVDPVDVADKVRKHWPN 62

Query: 64  VDIVSIGPAKKEK-----------KDQNEKMEELLKLY 71
            DI+S+GPAK+EK           K ++EK+E+LL  Y
Sbjct: 63  ADIISVGPAKEEKAAPPKVTKPKEKSESEKIEDLLNWY 100

[Close]

BLAST of CcUC01G002470 vs. NCBI nr
Match: XP_008437333.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo] >KAA0042723.1 heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11
Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 3   LRVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWP 62
           ++VV+KLDLHDD+GKQKALK+VSV+Q                    DPVDV   V+KHW 
Sbjct: 2   MKVVMKLDLHDDKGKQKALKSVSVVQGIESIAMDMKDKKLTVIGDVDPVDVVEKVRKHWR 61

Query: 63  NVDIVSIGPAKKEK-----------KDQNEKMEELLKLY 71
           N DIVS+GPAK+EK           K ++EK+E+LL  Y
Sbjct: 62  NADIVSVGPAKEEKKAPPKETKPKEKSESEKLEDLLIWY 100

[Close]

BLAST of CcUC01G002470 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.0e-10
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 4  RVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWPN 63
          ++V+KLDLHDDR KQKALKTVS L                     DPV+V + ++K+WP 
Sbjct: 3  KIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYWPM 62

[Close]

BLAST of CcUC01G002470 vs. ExPASy TrEMBL
Match: A0A1S3ATW9 (heavy metal-associated isoprenylated plant protein 3 OS=Cucumis melo OX=3656 GN=LOC103482784 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.0e-14
Identity = 51/93 (54.84%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 4  RVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWPN 63
          +VV+KL+LH DR KQKALK+VSVLQ                    DPVDV A V+KHWP+
Sbjct: 3  KVVLKLELHGDREKQKALKSVSVLQGIELIAMDMKDKKLTVIGDVDPVDVVAKVRKHWPD 62

Query: 64 VDIVSIGPAKKEKKDQ------NEKMEELLKLY 71
           DIVSIGPAK+EKK +      ++KMEELLKLY
Sbjct: 63 ADIVSIGPAKEEKKKEEQKNQNDQKMEELLKLY 95

[Close]

BLAST of CcUC01G002470 vs. ExPASy TrEMBL
Match: A0A0A0KQU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152260 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.8e-14
Identity = 50/93 (53.76%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 4  RVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWPN 63
          +VV+KL+LH DR KQKALK+VSVLQ                    DPVDV   V+KHWP+
Sbjct: 3  KVVLKLELHGDREKQKALKSVSVLQGIELIAMDMKDKKLTVIGDVDPVDVVGKVRKHWPD 62

Query: 64 VDIVSIGPAKKEKKDQ------NEKMEELLKLY 71
           DIVSIGPAK+EKK++      ++KMEELLKLY
Sbjct: 63 ADIVSIGPAKEEKKEEQKNQNNDQKMEELLKLY 95

[Close]

BLAST of CcUC01G002470 vs. ExPASy TrEMBL
Match: A0A0A0KK61 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152250 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.1e-12
Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 4   RVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWPN 63
           +VVVKLDLHDD+GKQKALK+VS LQ                    DPVDV   V+KHWPN
Sbjct: 3   KVVVKLDLHDDKGKQKALKSVSGLQGIESIAMDMKDKKLTVIGDVDPVDVADKVRKHWPN 62

Query: 64  VDIVSIGPAKKEK-----------KDQNEKMEELLKLY 71
            DI+S+GPAK+EK           K ++EK+E+LL  Y
Sbjct: 63  ADIISVGPAKEEKAAPPKVTKPKEKSESEKIEDLLNWY 100

[Close]

BLAST of CcUC01G002470 vs. ExPASy TrEMBL
Match: A0A5A7THG6 (Heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002220 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.6e-12
Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 3   LRVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWP 62
           ++VV+KLDLHDD+GKQKALK+VSV+Q                    DPVDV   V+KHW 
Sbjct: 2   MKVVMKLDLHDDKGKQKALKSVSVVQGIESIAMDMKDKKLTVIGDVDPVDVVEKVRKHWR 61

Query: 63  NVDIVSIGPAKKEK-----------KDQNEKMEELLKLY 71
           N DIVS+GPAK+EK           K ++EK+E+LL  Y
Sbjct: 62  NADIVSVGPAKEEKKAPPKETKPKEKSESEKLEDLLIWY 100

[Close]

BLAST of CcUC01G002470 vs. ExPASy TrEMBL
Match: A0A1S3ATS2 (heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=3656 GN=LOC103482785 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.6e-12
Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 3   LRVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWP 62
           ++VV+KLDLHDD+GKQKALK+VSV+Q                    DPVDV   V+KHW 
Sbjct: 2   MKVVMKLDLHDDKGKQKALKSVSVVQGIESIAMDMKDKKLTVIGDVDPVDVVEKVRKHWR 61

Query: 63  NVDIVSIGPAKKEK-----------KDQNEKMEELLKLY 71
           N DIVS+GPAK+EK           K ++EK+E+LL  Y
Sbjct: 62  NADIVSVGPAKEEKKAPPKETKPKEKSESEKLEDLLIWY 100

[Close]

BLAST of CcUC01G002470 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 7.2e-12
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 4  RVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWPN 63
          ++V+KLDLHDDR KQKALKTVS L                     DPV+V + ++K+WP 
Sbjct: 3  KIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYWPM 62

[Close]

BLAST of CcUC01G002470 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 7.2e-12
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 4  RVVVKLDLHDDRGKQKALKTVSVLQ--------------------DPVDVFATVQKHWPN 63
          ++V+KLDLHDDR KQKALKTVS L                     DPV+V + ++K+WP 
Sbjct: 3  KIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYWPM 62

The following BLAST results are available for this feature:

BLAST of CcUC01G002470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875364.1	1.4e-17	60.44	heavy metal-associated isoprenylated plant protein 39-like [Benincasa hispida]	[more]
XP_008437332.1	1.2e-13	54.84	PREDICTED: heavy metal-associated isoprenylated plant protein 3 [Cucumis melo]	[more]
XP_004143971.1	1.6e-13	53.76	heavy metal-associated isoprenylated plant protein 39 [Cucumis sativus] >KGN5006...	[more]
XP_004143886.1	2.3e-12	48.98	heavy metal-associated isoprenylated plant protein 39 isoform X1 [Cucumis sativu...	[more]
XP_008437333.1	1.2e-11	47.47	PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis me...	[more]

BLAST of CcUC01G002470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O03982	1.0e-10	44.30	Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX...	[more]

BLAST of CcUC01G002470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3ATW9	6.0e-14	54.84	heavy metal-associated isoprenylated plant protein 3 OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KQU3	7.8e-14	53.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152260 PE=4 SV=1	[more]
A0A0A0KK61	1.1e-12	48.98	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152250 PE=4 SV...	[more]
A0A5A7THG6	5.6e-12	47.47	Heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo var. m...	[more]
A0A1S3ATS2	5.6e-12	47.47	heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=365...	[more]

BLAST of CcUC01G002470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01490.1	7.2e-12	44.30	Heavy metal transport/detoxification superfamily protein	[more]
AT1G01490.2	7.2e-12	44.30	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 53..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G002470.1	CcUC01G002470.1	mRNA