CcUC01G002150 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGGAATAACGAGCTGCGTCGATGCTGCTCGGTGCTCCGTGATCGGGTCGGAGCATCAGCAGCGATCGAACAAGACATTGGATCAGTTTCAAATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAATTGGACTGCCTACTTAAAGAATATGGTCTACCGGTCACCGGAGACGTCACTCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTACTGA ATGAGTGGAATAACGAGCTGCGTCGATGCTGCTCGGTGCTCCGTGATCGGGTCGGAGCATCAGCAGCGATCGAACAAGACATTGGATCAGTTTCAAATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAATTGGACTGCCTACTTAAAGAATATGGTCTACCGGTCACCGGAGACGTCACTCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTACTGA ATGAGTGGAATAACGAGCTGCGTCGATGCTGCTCGGTGCTCCGTGATCGGGTCGGAGCATCAGCAGCGATCGAACAAGACATTGGATCAGTTTCAAATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAATTGGACTGCCTACTTAAAGAATATGGTCTACCGGTCACCGGAGACGTCACTCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTACTGA MSGITSCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVTQKRKFAMGAFLWPCEMY Homology
BLAST of CcUC01G002150 vs. NCBI nr
Match: KAA0042696.1 (hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK06100.1 hypothetical protein E5676_scaffold376G002010 [Cucumis melo var. makuwa]) HSP 1 Score: 166.4 bits (420), Expect = 1.1e-37 Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of CcUC01G002150 vs. NCBI nr
Match: KAE8647840.1 (hypothetical protein Csa_000107 [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36 Identity = 71/80 (88.75%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of CcUC01G002150 vs. NCBI nr
Match: XP_022958391.1 (uncharacterized protein LOC111459627 [Cucurbita moschata]) HSP 1 Score: 142.9 bits (359), Expect = 1.3e-30 Identity = 68/92 (73.91%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of CcUC01G002150 vs. NCBI nr
Match: KAG6606051.1 (hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29 Identity = 67/91 (73.63%), Postives = 72/91 (79.12%), Query Frame = 0
BLAST of CcUC01G002150 vs. NCBI nr
Match: KAG7035999.1 (hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 139.0 bits (349), Expect = 1.9e-29 Identity = 67/93 (72.04%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of CcUC01G002150 vs. ExPASy TrEMBL
Match: A0A0A0KMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.5e-40 Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0
BLAST of CcUC01G002150 vs. ExPASy TrEMBL
Match: A0A5D3C447 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002010 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.3e-38 Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0
BLAST of CcUC01G002150 vs. ExPASy TrEMBL
Match: A0A6J1H1Y5 (uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC111459627 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.2e-31 Identity = 68/92 (73.91%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of CcUC01G002150 vs. ExPASy TrEMBL
Match: A0A6J1CXF4 (uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015321 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26 Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 0
BLAST of CcUC01G002150 vs. ExPASy TrEMBL
Match: A0A2P5WJ43 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G245300v1 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.7e-24 Identity = 56/89 (62.92%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of CcUC01G002150 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 93.2 bits (230), Expect = 1.1e-19 Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 0
BLAST of CcUC01G002150 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.0 bits (201), Expect = 2.5e-16 Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of CcUC01G002150 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 3.4e-13 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of CcUC01G002150 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 4.4e-13 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of CcUC01G002150 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 2.7e-10 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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