CcUC01G002150 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC01G002150
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionNucleotide-sugar transporter
LocationCicolChr01: 1990449 .. 1990709 (+)
RNA-Seq ExpressionCcUC01G002150
SyntenyCcUC01G002150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGGAATAACGAGCTGCGTCGATGCTGCTCGGTGCTCCGTGATCGGGTCGGAGCATCAGCAGCGATCGAACAAGACATTGGATCAGTTTCAAATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAATTGGACTGCCTACTTAAAGAATATGGTCTACCGGTCACCGGAGACGTCACTCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTACTGA

mRNA sequence

ATGAGTGGAATAACGAGCTGCGTCGATGCTGCTCGGTGCTCCGTGATCGGGTCGGAGCATCAGCAGCGATCGAACAAGACATTGGATCAGTTTCAAATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAATTGGACTGCCTACTTAAAGAATATGGTCTACCGGTCACCGGAGACGTCACTCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTACTGA

Coding sequence (CDS)

ATGAGTGGAATAACGAGCTGCGTCGATGCTGCTCGGTGCTCCGTGATCGGGTCGGAGCATCAGCAGCGATCGAACAAGACATTGGATCAGTTTCAAATGCCTCTTCACTACCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCGGAGTGGAAATTGGACTGCCTACTTAAAGAATATGGTCTACCGGTCACCGGAGACGTCACTCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTACTGA

Protein sequence

MSGITSCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVTQKRKFAMGAFLWPCEMY
Homology
BLAST of CcUC01G002150 vs. NCBI nr
Match: KAA0042696.1 (hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK06100.1 hypothetical protein E5676_scaffold376G002010 [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 1.1e-37
Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0

Query: 6  SCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVT 65
          SC DAARCS+IGSEHQQRS+K LDQFQMPLHYPRYKRSDYE MPEWKLDCLLKEYGLP+ 
Sbjct: 2  SCADAARCSMIGSEHQQRSSKALDQFQMPLHYPRYKRSDYEDMPEWKLDCLLKEYGLPIV 61

Query: 66 GDVTQKRKFAMGAFLWPCEMY 87
          GDV QKRKFAMGAFLWPCEMY
Sbjct: 62 GDVAQKRKFAMGAFLWPCEMY 82

BLAST of CcUC01G002150 vs. NCBI nr
Match: KAE8647840.1 (hypothetical protein Csa_000107 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36
Identity = 71/80 (88.75%), Postives = 75/80 (93.75%), Query Frame = 0

Query: 6  SCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVT 65
          SC DAARCS+IGSEHQQRS+K  DQFQMPLHYPRY+RSDYEGMPEWKLDCLLKEYGLPV 
Sbjct: 2  SCADAARCSMIGSEHQQRSSKAFDQFQMPLHYPRYRRSDYEGMPEWKLDCLLKEYGLPVV 61

Query: 66 GDVTQKRKFAMGAFLWPCEM 86
          GDV QKRKFAMGAFLWPCE+
Sbjct: 62 GDVAQKRKFAMGAFLWPCEI 81

BLAST of CcUC01G002150 vs. NCBI nr
Match: XP_022958391.1 (uncharacterized protein LOC111459627 [Cucurbita moschata])

HSP 1 Score: 142.9 bits (359), Expect = 1.3e-30
Identity = 68/92 (73.91%), Postives = 73/92 (79.35%), Query Frame = 0

Query: 1  MSGITSCVDAARCSVIGSEHQQRS------NKTLDQFQMPLHYPRYKRSDYEGMPEWKLD 60
          MS I S VDAARC+VIG+E  Q+       +K  D FQMPLHYP+YKRSDYEGM EWKLD
Sbjct: 1  MSRIMSWVDAARCAVIGAEQPQQQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKLD 60

Query: 61 CLLKEYGLPVTGDVTQKRKFAMGAFLWPCEMY 87
          CLLKEYGLPV GDV QKRKFAMGAFLWP EMY
Sbjct: 61 CLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 92

BLAST of CcUC01G002150 vs. NCBI nr
Match: KAG6606051.1 (hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 67/91 (73.63%), Postives = 72/91 (79.12%), Query Frame = 0

Query: 1  MSGITSCVDAARCSVIGSEHQQRS-----NKTLDQFQMPLHYPRYKRSDYEGMPEWKLDC 60
          MS I S V AARC+VIG+E  Q+      +K  D FQMPLHYP+YKRSDYEGM EWKLDC
Sbjct: 1  MSRIMSWVYAARCAVIGAEQPQQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKLDC 60

Query: 61 LLKEYGLPVTGDVTQKRKFAMGAFLWPCEMY 87
          LLKEYGLPV GDV QKRKFAMGAFLWP EMY
Sbjct: 61 LLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 91

BLAST of CcUC01G002150 vs. NCBI nr
Match: KAG7035999.1 (hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.0 bits (349), Expect = 1.9e-29
Identity = 67/93 (72.04%), Postives = 72/93 (77.42%), Query Frame = 0

Query: 1  MSGITSCVDAARCSVIGSEHQQRS-------NKTLDQFQMPLHYPRYKRSDYEGMPEWKL 60
          MS I S V AARC+VIG+E  Q+        +K  D FQMPLHYP+YKRSDYEGM EWKL
Sbjct: 1  MSRIMSWVYAARCAVIGAEQPQQQQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKL 60

Query: 61 DCLLKEYGLPVTGDVTQKRKFAMGAFLWPCEMY 87
          DCLLKEYGLPV GDV QKRKFAMGAFLWP EMY
Sbjct: 61 DCLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 93

BLAST of CcUC01G002150 vs. ExPASy TrEMBL
Match: A0A0A0KMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.5e-40
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0

Query: 1  MSGITSCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEY 60
          MSGI SC DAARCS+IGSEHQQRS+K  DQFQMPLHYPRY+RSDYEGMPEWKLDCLLKEY
Sbjct: 1  MSGIMSCADAARCSMIGSEHQQRSSKAFDQFQMPLHYPRYRRSDYEGMPEWKLDCLLKEY 60

Query: 61 GLPVTGDVTQKRKFAMGAFLWPCEMY 87
          GLPV GDV QKRKFAMGAFLWPCEMY
Sbjct: 61 GLPVVGDVAQKRKFAMGAFLWPCEMY 86

BLAST of CcUC01G002150 vs. ExPASy TrEMBL
Match: A0A5D3C447 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002010 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.3e-38
Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0

Query: 6  SCVDAARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVT 65
          SC DAARCS+IGSEHQQRS+K LDQFQMPLHYPRYKRSDYE MPEWKLDCLLKEYGLP+ 
Sbjct: 2  SCADAARCSMIGSEHQQRSSKALDQFQMPLHYPRYKRSDYEDMPEWKLDCLLKEYGLPIV 61

Query: 66 GDVTQKRKFAMGAFLWPCEMY 87
          GDV QKRKFAMGAFLWPCEMY
Sbjct: 62 GDVAQKRKFAMGAFLWPCEMY 82

BLAST of CcUC01G002150 vs. ExPASy TrEMBL
Match: A0A6J1H1Y5 (uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC111459627 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.2e-31
Identity = 68/92 (73.91%), Postives = 73/92 (79.35%), Query Frame = 0

Query: 1  MSGITSCVDAARCSVIGSEHQQRS------NKTLDQFQMPLHYPRYKRSDYEGMPEWKLD 60
          MS I S VDAARC+VIG+E  Q+       +K  D FQMPLHYP+YKRSDYEGM EWKLD
Sbjct: 1  MSRIMSWVDAARCAVIGAEQPQQQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKLD 60

Query: 61 CLLKEYGLPVTGDVTQKRKFAMGAFLWPCEMY 87
          CLLKEYGLPV GDV QKRKFAMGAFLWP EMY
Sbjct: 61 CLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY 92

BLAST of CcUC01G002150 vs. ExPASy TrEMBL
Match: A0A6J1CXF4 (uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015321 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 54/68 (79.41%), Postives = 59/68 (86.76%), Query Frame = 0

Query: 19 EHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVTQKRKFAMGA 78
          + QQR +K   QFQMPLHYPRYK+SDYE MPEWKLDCLLKEYGLP+ GDV QKRKFAMGA
Sbjct: 17 QQQQRVSKQFHQFQMPLHYPRYKKSDYEAMPEWKLDCLLKEYGLPIVGDVAQKRKFAMGA 76

Query: 79 FLWPCEMY 87
          FLWPC+ Y
Sbjct: 77 FLWPCDQY 84

BLAST of CcUC01G002150 vs. ExPASy TrEMBL
Match: A0A2P5WJ43 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G245300v1 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.7e-24
Identity = 56/89 (62.92%), Postives = 66/89 (74.16%), Query Frame = 0

Query: 1  MSGITSCVD----AARCSVIGSEHQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCL 60
          MSG T+C +    AAR    G+ HQ +SN     FQMPLHYPRYK+SDYE MPEW+LDCL
Sbjct: 1  MSG-TNCPEAVDMAARVMANGNYHQAKSNDKCCYFQMPLHYPRYKKSDYENMPEWQLDCL 60

Query: 61 LKEYGLPVTGDVTQKRKFAMGAFLWPCEM 86
          L +YGLP+ GD  QKRKFAMGAFLWP ++
Sbjct: 61 LNQYGLPIIGDANQKRKFAMGAFLWPSQV 88

BLAST of CcUC01G002150 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-19
Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 0

Query: 20 HQQRSNKTLDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVTQKRKFAMGAF 79
          H +  N++   FQ+PLHYP+Y +SDYE MPEW+LD LL+EYGLPV GD  +KRKFA+GAF
Sbjct: 35 HDKPQNQS-SSFQIPLHYPKYTKSDYEKMPEWQLDRLLREYGLPVIGDSYEKRKFAIGAF 94

Query: 80 LWPCE 85
          LW  E
Sbjct: 95 LWSSE 98

BLAST of CcUC01G002150 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 2.5e-16
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 0

Query: 31 FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVTQKRKFAMGAFLW 82
          F+MPLHYPRY + DY+ MPEWKLD +L +YGL   GD+  KR FA+GAFLW
Sbjct: 32 FRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLSTYGDLAHKRDFAIGAFLW 82

BLAST of CcUC01G002150 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 3.4e-13
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 31 FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVT--QKRKFAMGAFLWP 83
          F+MPLHYPRY + DYE M EW+LD LL EYGL    D T  +KR FA+  F+WP
Sbjct: 36 FKMPLHYPRYTKEDYEEMEEWRLDLLLSEYGLLAFHDNTLHEKRAFAIDTFIWP 89

BLAST of CcUC01G002150 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-13
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0

Query: 31  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVTGDVTQKRKFAMGAFLWPCEM 86
           FQ+PLHYP+Y +SDYE M + +LD LLK+YG    G +  KR FA+ +FLWP ++
Sbjct: 47  FQVPLHYPKYSKSDYEVMDDLRLDLLLKQYGFSFEGSLEDKRVFAIESFLWPDQL 101

BLAST of CcUC01G002150 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 2.7e-10
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0

Query: 31  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPV-TGDVTQKRKFAMGAFLW 82
           FQMPL YP Y +  Y+ M E +LD LLK YGLP   G+++ K++FA+GAFLW
Sbjct: 57  FQMPLQYPNYAKEQYDIMSEEELDRLLKLYGLPTDIGNLSCKKEFAVGAFLW 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0042696.11.1e-3790.12hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK0610... [more]
KAE8647840.11.6e-3688.75hypothetical protein Csa_000107 [Cucumis sativus][more]
XP_022958391.11.3e-3073.91uncharacterized protein LOC111459627 [Cucurbita moschata][more]
KAG6606051.11.1e-2973.63hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7035999.11.9e-2972.04hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KMG02.5e-4089.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1[more]
A0A5D3C4475.3e-3890.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1H1Y56.2e-3173.91uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC1114596... [more]
A0A6J1CXF41.2e-2679.41uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A2P5WJ439.7e-2462.92Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G245300v1 PE... [more]
Match NameE-valueIdentityDescription
AT5G41761.11.1e-1963.08unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G55570.12.5e-1664.71unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G09950.13.4e-1359.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G55620.14.4e-1352.73unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G11405.12.7e-1055.77unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33513OS06G0523300 PROTEINcoord: 1..84
NoneNo IPR availablePANTHERPTHR33513:SF31SUBFAMILY NOT NAMEDcoord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC01G002150.1CcUC01G002150.1mRNA