CcUC01G001570 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAAGAGAGATCAAGATATGGAGGATGAGATGATTGATGATACTTCTCCAAGCTGGAAACTTTATGAAAACCCTTTTTATATTAGCCCTCCTCATCATCGTCATCGTCATCGTCGTCAAACTGATGCTCATAAATCTTCCATTAACAACCAACTTCAGTTTTATTGCTTGAAATTTTCTTCTTCTTCTTCTTCTTCTTCTTGTGATTTGTTTCCTACTAAAAGGCGAATGGATTCGGAGCTGGATCTTGCCCGAAGCCAGATCGTGCAGCTCAAGACCGAGCTTCGGTACGAGCGCAAGGCTCGTAAAAAGCTCGAGTCCTTGGCGAAGAGGCTGGCTAAGGAGCTTGATGAAGAGAGGAAACAAAGGGTAGCCATGGAAGGATTGTGTCAAGAGCTTGCAAGAGAGATCTCTTCTCATGAAGCTCAAATAGATCTGATGAAGAAGGAGATTGAAGATGAGAGGAAGATGCTCAGGTTTGTTTGATAAAAATAAATAAATAAATAAAAATAAATGTTTTATTTTTATATTTAAAATTTCGACCTTTTCGCATGAAACTTTCAAAATGTCGGTTCTAGTGTCTGTGTTTAGTTTAGTGCCTCATCTTACTTTGCTTTTATTATAGCTTTTTTAGTTGAACTAATCCGGAATGGAGATAGAGAATTGAACTTTTTTAGATTTATGATATAACGTAAGTAGTTTATTTGCTATGCTTGAATAATTTTGTTCTTAATTTTCCAGAAATATAATGCTTGGATTGACCAATGAATAAATGTTAAATGTTGATTTGAGAATATTAGCTGATGGGACCATAGATTAGAGCCAAATATGTGGTCTAAAACAAGTATGGGTAGCAGACAAAATAATCCAAATGATTGAAACGTCACTTTTTTTTTTTTTTTCAACACTTCAGGAACAAAATAGATATTTGAAAAATTAAGAATAAAAAAGAAATAAAAAAAAAATCTTGCCTTTTTTTTTTTTTTTTTTTTTTTTTNGTATGGGTAGCAGACAAAATAATCCAAATGATTGAAACGTCACTTTTTTTTTTTTTTTCAACACTTCAGGAACAAAATAGATATTTGAAAAATTAAGAATAAAAAAGAAATAAAAAAAAAATCTTGCCTTTTTTTTTTTTTTTTTCTTCTTCTTCAAGGATTTAGGGATTTAAGCAAGAGAATGAAGTGGCATCTCTTAACAAAACAATCTTGAAAATGACAAAAAAGTGAGATTTAAACCTAAATTAAATATATCACCCTCAAGCCCAAAACTTAAAAAGATAGATTAGACCAACAAATGGTTAACAAGAAAAATTTATGAGAAACTAACCAATTATTCCAAACAAAGCTGCTACAATGTTAAATCACTATTAAATTTTAAGTAATTAAGCTTAATAACTTAAATTGCATATATAATTATCTAAGAAACAAATTTAACAATAAGTTCATTTTATAATTTTGGTTAAAAAACATTTTTGGTCCCTCAAATTTCATGTAAGGAATAACTTAATCCTTGAACAAACATTTGATGGTAACAATTTAGTTCTTGAAGTTGAAATGTGTAATAATTTAAGTTTTAATTATGAAAAATCTCATCAAAATTAAGTGTTGGTTTTCATTTGGTAATAACTTATATATTTATAAAGTTATAAAAAAAATTGATCTCTGATTAGTTTATTGATCCACATGTATAAAATAAAACTTTAATCCTACAAACTATTTTCACTCTAAGAACTAAGTTGTTACAAATTTTATAGTATGGGAACTCAATTGTTAAAAATTTGAGAGTATAGGAACTAAATCATTATCTAATAAAGTTTTTAAAGACTAAATTGTTATTCCTACAACCGTTTCAAGACCAAAAGTGTTTTTTTTTTTTTTAACCTTTAAAAGTCACATTAATCCTATTCCAATACTGCGTTAACCTATCATGGAATGTGAAACTCGAAACTGAAACCGAAAGAATTAAACTTCGATTTATTTCTAATGACTTTTTAAGATGATATTTGGACACTAAATTGAGTTATTAAATAAGAGTTAATTACTTTGCGAGTTTAAAAAAGAGCAATTATTAGGTGCTAATCTATGCTTATATGTATTCACTTTTCTAGGAATGTGTTTTCCGTCGCCGCCCTCGTCTTGTAGACATCTCTACATGCTGGTCTTTATTTTATTAAAAGAATATTTATTAATTTGCACAAAGATAAATGTAACTCACTCATGCATTATGAGGTGGATTTTAACATTTTTCCTGATTTGCTTTAAAATAATTTGGAATTGAAGGTTGGCTGAGGTTTTGCGAGAAGAGAGAGTTCAAATGAAGCTTGCAGAGGTAAAAATCGTCTTCGAACATATGCTTTCAGAGATTGAATCAGGAACAACCAACAACAACACCACCGCCGCCGTATTTTCCGACTTTTCCGGCGAACTAAAGCACACGGCGGCAGAGAACCTATCGGCAAGTTCCGATAACAACAACGCCATTGGCGATGGCGACGGATCTTCACCGAGAGAATCAACAAGATCGGACACCGCCGCCGTGGGAGAGCAGAGATTAAGCTGCAGCAACACGGCGGCTCCGAGAAGTGCGTCGCCGGAGCTGGAAAATAATAATCCTCATATTGTGAGAGGAATTAAAGGGTTCGTGGAATTCCGGCGAGTGGTTCGAACAAAAGGGTCAAAAAGTAGAGATTCAGATGCGAAATTGGAGTGTCAAAAAGCTCAGCTTAGAGTTCTTCTCAAACAAAAATCCTCTCTCACATCCAACAACCTCATTATTACCTAATTTATTTCATATTTCTCAATTTTTTTTTCCTTTTTTTCTTCCCTCTCCCTATTGAAATAATTGGTTGATTTTATATATATATATTTTGGGAAAAGTTATATGAACTTATTAAAATAAGTTTTCTTTTTCCTTTTTTGGGCTTCGGTTTGAATTGTTGTGGAAGACACTTTTGTGTATAGAGTTCTTTTTTATGTTCATTTGAAAGTGATAGTTGGATTAGATGTAAAGGTTTTTGAG GAGGAAGAGAGATCAAGATATGGAGGATGAGATGATTGATGATACTTCTCCAAGCTGGAAACTTTATGAAAACCCTTTTTATATTAGCCCTCCTCATCATCGTCATCGTCATCGTCGTCAAACTGATGCTCATAAATCTTCCATTAACAACCAACTTCAGTTTTATTGCTTGAAATTTTCTTCTTCTTCTTCTTCTTCTTCTTGTGATTTGTTTCCTACTAAAAGGCGAATGGATTCGGAGCTGGATCTTGCCCGAAGCCAGATCGTGCAGCTCAAGACCGAGCTTCGGTACGAGCGCAAGGCTCGTAAAAAGCTCGAGTCCTTGGCGAAGAGGCTGGCTAAGGAGCTTGATGAAGAGAGGAAACAAAGGGTAGCCATGGAAGGATTGTGTCAAGAGCTTGCAAGAGAGATCTCTTCTCATGAAGCTCAAATAGATCTGATGAAGAAGGAGATTGAAGATGAGAGGAAGATGCTCAGGTTGGCTGAGGTTTTGCGAGAAGAGAGAGTTCAAATGAAGCTTGCAGAGGTAAAAATCGTCTTCGAACATATGCTTTCAGAGATTGAATCAGGAACAACCAACAACAACACCACCGCCGCCGTATTTTCCGACTTTTCCGGCGAACTAAAGCACACGGCGGCAGAGAACCTATCGGCAAGTTCCGATAACAACAACGCCATTGGCGATGGCGACGGATCTTCACCGAGAGAATCAACAAGATCGGACACCGCCGCCGTGGGAGAGCAGAGATTAAGCTGCAGCAACACGGCGGCTCCGAGAAGTGCGTCGCCGGAGCTGGAAAATAATAATCCTCATATTGTGAGAGGAATTAAAGGGTTCGTGGAATTCCGGCGAGTGGTTCGAACAAAAGGGTCAAAAAGTAGAGATTCAGATGCGAAATTGGAGTGTCAAAAAGCTCAGCTTAGAGTTCTTCTCAAACAAAAATCCTCTCTCACATCCAACAACCTCATTATTACCTAATTTATTTCATATTTCTCAATTTTTTTTTCCTTTTTTTCTTCCCTCTCCCTATTGAAATAATTGGTTGATTTTATATATATATATTTTGGGAAAAGTTATATGAACTTATTAAAATAAGTTTTCTTTTTCCTTTTTTGGGCTTCGGTTTGAATTGTTGTGGAAGACACTTTTGTGTATAGAGTTCTTTTTTATGTTCATTTGAAAGTGATAGTTGGATTAGATGTAAAGGTTTTTGAG ATGGAGGATGAGATGATTGATGATACTTCTCCAAGCTGGAAACTTTATGAAAACCCTTTTTATATTAGCCCTCCTCATCATCGTCATCGTCATCGTCGTCAAACTGATGCTCATAAATCTTCCATTAACAACCAACTTCAGTTTTATTGCTTGAAATTTTCTTCTTCTTCTTCTTCTTCTTCTTGTGATTTGTTTCCTACTAAAAGGCGAATGGATTCGGAGCTGGATCTTGCCCGAAGCCAGATCGTGCAGCTCAAGACCGAGCTTCGGTACGAGCGCAAGGCTCGTAAAAAGCTCGAGTCCTTGGCGAAGAGGCTGGCTAAGGAGCTTGATGAAGAGAGGAAACAAAGGGTAGCCATGGAAGGATTGTGTCAAGAGCTTGCAAGAGAGATCTCTTCTCATGAAGCTCAAATAGATCTGATGAAGAAGGAGATTGAAGATGAGAGGAAGATGCTCAGGTTGGCTGAGGTTTTGCGAGAAGAGAGAGTTCAAATGAAGCTTGCAGAGGTAAAAATCGTCTTCGAACATATGCTTTCAGAGATTGAATCAGGAACAACCAACAACAACACCACCGCCGCCGTATTTTCCGACTTTTCCGGCGAACTAAAGCACACGGCGGCAGAGAACCTATCGGCAAGTTCCGATAACAACAACGCCATTGGCGATGGCGACGGATCTTCACCGAGAGAATCAACAAGATCGGACACCGCCGCCGTGGGAGAGCAGAGATTAAGCTGCAGCAACACGGCGGCTCCGAGAAGTGCGTCGCCGGAGCTGGAAAATAATAATCCTCATATTGTGAGAGGAATTAAAGGGTTCGTGGAATTCCGGCGAGTGGTTCGAACAAAAGGGTCAAAAAGTAGAGATTCAGATGCGAAATTGGAGTGTCAAAAAGCTCAGCTTAGAGTTCTTCTCAAACAAAAATCCTCTCTCACATCCAACAACCTCATTATTACCTAA MEDEMIDDTSPSWKLYENPFYISPPHHRHRHRRQTDAHKSSINNQLQFYCLKFSSSSSSSSCDLFPTKRRMDSELDLARSQIVQLKTELRYERKARKKLESLAKRLAKELDEERKQRVAMEGLCQELAREISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNTTAAVFSDFSGELKHTAAENLSASSDNNNAIGDGDGSSPRESTRSDTAAVGEQRLSCSNTAAPRSASPELENNNPHIVRGIKGFVEFRRVVRTKGSKSRDSDAKLECQKAQLRVLLKQKSSLTSNNLIIT Homology
BLAST of CcUC01G001570 vs. NCBI nr
Match: XP_038875316.1 (protein BRANCHLESS TRICHOME [Benincasa hispida]) HSP 1 Score: 498.0 bits (1281), Expect = 5.9e-137 Identity = 283/320 (88.44%), Postives = 290/320 (90.62%), Query Frame = 0
BLAST of CcUC01G001570 vs. NCBI nr
Match: XP_008437448.1 (PREDICTED: protein BRANCHLESS TRICHOME [Cucumis melo]) HSP 1 Score: 451.1 bits (1159), Expect = 8.2e-123 Identity = 266/331 (80.36%), Postives = 283/331 (85.50%), Query Frame = 0
BLAST of CcUC01G001570 vs. NCBI nr
Match: XP_011654677.1 (protein BRANCHLESS TRICHOME [Cucumis sativus] >KGN49978.1 hypothetical protein Csa_000364 [Cucumis sativus]) HSP 1 Score: 447.2 bits (1149), Expect = 1.2e-121 Identity = 266/331 (80.36%), Postives = 280/331 (84.59%), Query Frame = 0
BLAST of CcUC01G001570 vs. NCBI nr
Match: XP_023521394.1 (protein BRANCHLESS TRICHOME-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 391.3 bits (1004), Expect = 7.7e-105 Identity = 241/320 (75.31%), Postives = 256/320 (80.00%), Query Frame = 0
BLAST of CcUC01G001570 vs. NCBI nr
Match: KAG6579586.1 (Protein BRANCHLESS TRICHOME, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 391.3 bits (1004), Expect = 7.7e-105 Identity = 241/320 (75.31%), Postives = 256/320 (80.00%), Query Frame = 0
BLAST of CcUC01G001570 vs. ExPASy Swiss-Prot
Match: F4I878 (Protein BRANCHLESS TRICHOME OS=Arabidopsis thaliana OX=3702 GN=BLT PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.4e-27 Identity = 106/310 (34.19%), Postives = 156/310 (50.32%), Query Frame = 0
BLAST of CcUC01G001570 vs. ExPASy TrEMBL
Match: A0A1S3AUL6 (protein BRANCHLESS TRICHOME OS=Cucumis melo OX=3656 GN=LOC103482864 PE=4 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 4.0e-123 Identity = 266/331 (80.36%), Postives = 283/331 (85.50%), Query Frame = 0
BLAST of CcUC01G001570 vs. ExPASy TrEMBL
Match: A0A0A0KK85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148490 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 5.7e-122 Identity = 266/331 (80.36%), Postives = 280/331 (84.59%), Query Frame = 0
BLAST of CcUC01G001570 vs. ExPASy TrEMBL
Match: A0A6J1EL37 (protein BRANCHLESS TRICHOME-like OS=Cucurbita moschata OX=3662 GN=LOC111435642 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.9e-104 Identity = 240/320 (75.00%), Postives = 255/320 (79.69%), Query Frame = 0
BLAST of CcUC01G001570 vs. ExPASy TrEMBL
Match: A0A6J1HY45 (protein BRANCHLESS TRICHOME-like OS=Cucurbita maxima OX=3661 GN=LOC111469076 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 2.4e-104 Identity = 239/320 (74.69%), Postives = 255/320 (79.69%), Query Frame = 0
BLAST of CcUC01G001570 vs. ExPASy TrEMBL
Match: A0A6J1DRL7 (protein BRANCHLESS TRICHOME OS=Momordica charantia OX=3673 GN=LOC111023636 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 5.1e-94 Identity = 218/315 (69.21%), Postives = 242/315 (76.83%), Query Frame = 0
BLAST of CcUC01G001570 vs. TAIR 10
Match: AT1G64690.1 (branchless trichome ) HSP 1 Score: 125.2 bits (313), Expect = 9.6e-29 Identity = 106/310 (34.19%), Postives = 156/310 (50.32%), Query Frame = 0
BLAST of CcUC01G001570 vs. TAIR 10
Match: AT3G11590.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). ) HSP 1 Score: 72.0 bits (175), Expect = 9.7e-13 Identity = 53/129 (41.09%), Postives = 77/129 (59.69%), Query Frame = 0
BLAST of CcUC01G001570 vs. TAIR 10
Match: AT1G50660.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 3.7e-12 Identity = 48/129 (37.21%), Postives = 77/129 (59.69%), Query Frame = 0
BLAST of CcUC01G001570 vs. TAIR 10
Match: AT3G20350.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50660.1); Has 15095 Blast hits to 11224 proteins in 1051 species: Archae - 223; Bacteria - 1586; Metazoa - 7000; Fungi - 1255; Plants - 746; Viruses - 40; Other Eukaryotes - 4245 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 4.8e-12 Identity = 54/162 (33.33%), Postives = 89/162 (54.94%), Query Frame = 0
BLAST of CcUC01G001570 vs. TAIR 10
Match: AT5G22310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 2.2e-09 Identity = 53/161 (32.92%), Postives = 79/161 (49.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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