CcUC01G001440 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G001440
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	50S ribosomal protein L11
Location	CicolChr01: 1271605 .. 1275585 (-)
RNA-Seq Expression	CcUC01G001440
Synteny	CcUC01G001440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTCTTTTTCTTTGATTTAATTTAAATCGCGGGGTTTATCCGAAAAAGTTGCGAGAGCTCTGTGTGTTTGGTTTGCTTATCTATGGCGTCTTCCCTCTCCACCTATCATCAACATCATCTTCTTTCTCCTTTATTTTCTTCCAAAATTACTGCTAATTCCAAGCATCTTTCCTCTCCATTTCTCACTTCACCCTCTTCTGGGTTGTCTTCAAATTTCAATTTCTCGCTTCGGTTCCTCAGCAATGGCCAATCTTCCTCCCTCATCTCTCCCACTCCAAGGCGTCTCAGTATTGTCTCAATGGCCCCTCCTAAAGCCAAGCCCGGTGGAAAATCCAAGAAGGGTAAATTTCTTTTTCTGATAAACCCTTAATTTCCTTCAACCATCATCCTTAATTCGGCTGCGATTTCATCTAATTTGCTTTTCGGGTTTACAGTAATTGGGATGATAAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTAGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATTATGGCCTTCTGTAAGGATTACAATGCCAAGACAGCTGACAAGGCCGGCTACGTTATTCCAGTCGAAATTACTGTTTACGATGTGGGTTTGTCTTTCTTCTCTGTGAATGCTCTGCCATGCTTTTCTTCGGCAATGTCTTAATTGTTTGATTTGGAACAGGATAAAAGTTTTACTTTCGTGCTGAAGACTCCACCTGCTTCAGTTCTTCTTCTCAAGGCTGCTGGTATTTCCCTTTAAGTGTTTGATGCTCTTTTTGCTGTTCCACTCTCATATTTTGTGTGTTTCATGTGCGGATATGTTTTATCCAATTTTTCAATTCCCTTGTTTGTGCCAATTGCAATTGCTATGGCTTTTTGCAAACCCATTTGGCATCCCCTGTGTAACCTTTTTATTCTTTTTGATTTAATGAAAATTTGGCTTTTCTTCTTGGAAACTGTTCATTTCACTTTTGTTTACAAGGAGGTGGGGAGCAGAGGAGAATTAATGAAGTTACTTACTAAATTAATTGCTAATCACATTCATAATTGGAACTCCTTCACTGAGATGTTGGCTATAGAAGGATCCATATCTGGTTTATATTAAAATTTGATATTTGTTCGTTACAATTTGCCACTGATATCCTACTTTTTTTAAAAAAATTGATTTTTATAGTAATAATAATTATTATTATTTCCCCCCGTTTGTGAGTTGTTTCTAAAACAGTAACTTATTTAGATTGGTGAAATGTAGGAGAAGGCTTCAGGGGTTAAAGTGGATTTAGATCAAATTGTGGTGGCAGAGATCTATGTCTTTAATAAGCATGAATTTCAGGTCTGAGGAGCGAAGTGGCCCTTCAATTACCTTGATATTAGTTAAATTCTAGAACTATAATGTTTTGCATCCCTTAGTTGAAGAAATTAATGAGAAGATTAGGAAATGGAAGAAGTCCTACATCTTCATGAGTCAGCAACCTCACCCTAGGCCAGGCTAGCTGCGCTGTATTCTCCAATTCTCCCAAATATTTATTGGTTTTAGTCTTCAAGTTCCCTATGGTTGCAAGGAAGGTGGACCAAATCCAAAGAGATCTCTTTTGGAAGGTCTAAAGCAAGAAGTTGTCGGCATCCAAACACAAAAAACATACAAAACTAATATATTGCAATGTAAAAAAAAAAAAAACTACAATAGAAATATGTAATTTGAGGTACTTGTACTCTCTTTCTTCAGATCTCTCTCAAACCTAATTCACTCACCAAATGCTCAACTCCCTTCTTCCTCACTCGCTCTATTATAACTAAACTCCAAATGTAACCAGCCTCTCTATCTAATTACTAATATACCCTTAATATTCCTAATTGCATTCCTAACAAAACTTCACTGGTATGTTTACCTTATTCATTGGAACATAACTTTGAGATTCAATGCCTATGGAGGAATGGGCACTTGCAATTGCAAAAGTATCAGGAGGAATGTCGTTCTGTTTAAGTGTGGATTAAACATGTTTTCCAGATGAGATAGAGCAGCTTTGTGGCATATGGTGATTGCTGCTAAATATGGCGTAGGCTCCTTAGCTTCTGATTCATGACTAACAACCAAACTCAATCATGCAAGAGAAGTCCCTAATTCTTCATAACCAAGCCAATAATTTGAATCCCTAGGAAAACTAGGATGGTGGTTGCCAGTTGGAATGTTAATAAGGTTAGCTTTTGGAAGGACAATGGAAGTAGGTATCTTTTAGGCATGCAGTGTGGTGAAGATAGTGGCACCAGAAAATGTTTGTTGCATATTTTGTGCAAGTCTCTCTTTTGGTATGTCGCTTTAGAAGCTACTGCCTCTATGCATTTTGTTACCCAAAAAATTGGAAAGGATGTCCTACCTCTTAAATAGACCAAACTTTTCTTCTGGGGTGGTATTTGGAGGATATTATCCACCTCCTCTTCATCAAATTACAGCTTACTACCCAACTCTCGAAGTGGCCATTGCTTGCTTTTGGACATGTTTTTGGGATTCCTTCTAATTTCAGACCTTCATGTATTTTTAGATGGATTATCTTTACTCAAAATCAAATAGGGATCTGTTTTGTGGCTTGATGCTATTATGATCATTTTTTGAGAATCTTGGTTGGAAAGGGATTGAAGAGTATTTCACAACAGGAAGAAAGGGTAGCGCATGGGGTTTGGGAAATCATCATTCTTCTTACTTCTTAATGAGTGTAAGTTCTAAGGAATTGACTCTTCCTCTTCCATTATTGCCCCCAATTTGATATCTTTTTGTAACTTCTTGGCATAGGGGTTTCCTTTCCTGTATATTTCATTCTTTTGAAGAAACTGTTTCTTGCCAAAAAATAAAATAAATACAGTCATTGAGCCATTTGGTACTGAGATTGAATCACTATCAGCATGCAGCCAGAGGTCCGTGTAATCACTTTGATACTTGTGAAAATCTCGTGTATTATCCAAGACTTGAGAAAAGCAAAGAGTACATCTTTTGATTAGAGTCATCCGAGACAAACTTTCATTGAAGAAAGGAAGGGAATACAGGAAAAAAAGAAAAAGGCACAGGGAAGAAAGAACGCTCTTTGAATGAGTAGTAGGAAAAACTCCTCGAATCTATGAGGATACAAAAGTAATTACAATGAAACAATAGCCTTTTGAGAGGGTCGTCTCTCTACCAAGTCCCACAACACAATCTCACCAAAATGATCCTCCTTCCCAAAAATTTCAAAGCCCTTTATTTATGACCACGCCACCCTTATCTAATTACTGCTATGCCCTTGCTAATATTCACAATACTGATTAGTACTCTCACAGTATGATCCTCTAATTCAAGTTAGAAGGAGCCAAGTCATTCGTAGGGATTCGTATTTTGTAATAAAAAGCTAATGAGTAAAATGTTTTTTATTTTTGTATTTTGTGATAAAAAGCTAATCAGTTAGTGGCATCTATAGTAGACAATCTACAGCACACCTAGGAGATTCACATCGATTTGCATGCCATTTTGATAGTTTACGTATGCTGAGAAGTTGTTTGCCCACACTGCCTGCTGTATTGCATTTTATTAACCTGTATGAGCTGGTTCATGCAGGAGTTGAAAAAGGATCAAAAGATCCGAAGGGAGAAAAAGTGGGAAAGATAACCATTGAACAGTTGCGCATGATTGCTGCAGAAAAGTTACCAGATTTAAATTGCACAACCATTGAATCTGCAATGAGAATCATAGCAGGTACAGCAGCCAATATGGGAATTGAGGTTGACCCTCCTGTTCTTGAACCTAAAAAGAAGGAACTTGTGTAGTCATTTGTGATAAATTGGTCTATTCTTTTCACTTTTTTTGTATGCTTTAATCTATTCGAGGTATCTTACTTTAAGAAGATTTACAAATCCACATTCAAGCTTTTGAATTCTATATGGTTCTTATGCTTGATCTCACTAAGCTTTCTTTTTTGTTTATCTTGAAGAGCATCCCATTTTGAGC

mRNA sequence

TTTTTTTTCTTTTTCTTTGATTTAATTTAAATCGCGGGGTTTATCCGAAAAAGTTGCGAGAGCTCTGTGTGTTTGGTTTGCTTATCTATGGCGTCTTCCCTCTCCACCTATCATCAACATCATCTTCTTTCTCCTTTATTTTCTTCCAAAATTACTGCTAATTCCAAGCATCTTTCCTCTCCATTTCTCACTTCACCCTCTTCTGGGTTGTCTTCAAATTTCAATTTCTCGCTTCGGTTCCTCAGCAATGGCCAATCTTCCTCCCTCATCTCTCCCACTCCAAGGCGTCTCAGTATTGTCTCAATGGCCCCTCCTAAAGCCAAGCCCGGTGGAAAATCCAAGAAGGTAATTGGGATGATAAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTAGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATTATGGCCTTCTGTAAGGATTACAATGCCAAGACAGCTGACAAGGCCGGCTACGTTATTCCAGTCGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTGAAGACTCCACCTGCTTCAGTTCTTCTTCTCAAGGCTGCTGGAGTTGAAAAAGGATCAAAAGATCCGAAGGGAGAAAAAGTGGGAAAGATAACCATTGAACAGTTGCGCATGATTGCTGCAGAAAAGTTACCAGATTTAAATTGCACAACCATTGAATCTGCAATGAGAATCATAGCAGGTACAGCAGCCAATATGGGAATTGAGGTTGACCCTCCTGTTCTTGAACCTAAAAAGAAGGAACTTGTGTAGTCATTTGTGATAAATTGGTCTATTCTTTTCACTTTTTTTGTATGCTTTAATCTATTCGAGGTATCTTACTTTAAGAAGATTTACAAATCCACATTCAAGCTTTTGAATTCTATATGGTTCTTATGCTTGATCTCACTAAGCTTTCTTTTTTGTTTATCTTGAAGAGCATCCCATTTTGAGC

Coding sequence (CDS)

ATGGCGTCTTCCCTCTCCACCTATCATCAACATCATCTTCTTTCTCCTTTATTTTCTTCCAAAATTACTGCTAATTCCAAGCATCTTTCCTCTCCATTTCTCACTTCACCCTCTTCTGGGTTGTCTTCAAATTTCAATTTCTCGCTTCGGTTCCTCAGCAATGGCCAATCTTCCTCCCTCATCTCTCCCACTCCAAGGCGTCTCAGTATTGTCTCAATGGCCCCTCCTAAAGCCAAGCCCGGTGGAAAATCCAAGAAGGTAATTGGGATGATAAAGCTTGCTCTGGAGGCTGGAAAGGCTACCCCAGCTCCTCCTGTAGGCCCTGCTCTTGGTTCGAAGGGTGTTAATATTATGGCCTTCTGTAAGGATTACAATGCCAAGACAGCTGACAAGGCCGGCTACGTTATTCCAGTCGAAATTACTGTTTACGATGATAAAAGTTTTACTTTCGTGCTGAAGACTCCACCTGCTTCAGTTCTTCTTCTCAAGGCTGCTGGAGTTGAAAAAGGATCAAAAGATCCGAAGGGAGAAAAAGTGGGAAAGATAACCATTGAACAGTTGCGCATGATTGCTGCAGAAAAGTTACCAGATTTAAATTGCACAACCATTGAATCTGCAATGAGAATCATAGCAGGTACAGCAGCCAATATGGGAATTGAGGTTGACCCTCCTGTTCTTGAACCTAAAAAGAAGGAACTTGTGTAG

Protein sequence

MASSLSTYHQHHLLSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSLISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV

Homology

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BLAST of CcUC01G001440 vs. NCBI nr
Match: XP_038876314.1 (50S ribosomal protein L11, chloroplastic [Benincasa hispida])

HSP 1 Score: 428.7 bits (1101), Expect = 3.2e-116
Identity = 226/234 (96.58%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASSLSTYHQHHLLSP FSSKITANSK LSSPFLTS SSGLSS FNFSLRFLSNGQSSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKITANSKPLSSPFLTSSSSGLSSKFNFSLRFLSNGQSSSL 60

Query: 61  ISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLS+VSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKK+LV
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKQLV 234

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BLAST of CcUC01G001440 vs. NCBI nr
Match: XP_008437462.1 (PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis melo] >KAA0042635.1 50S ribosomal protein L11 [Cucumis melo var. makuwa] >TYK06036.1 50S ribosomal protein L11 [Cucumis melo var. makuwa])

HSP 1 Score: 419.5 bits (1077), Expect = 1.9e-113
Identity = 220/234 (94.02%), Postives = 227/234 (97.01%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASSLSTYHQHHLLSP FSSKI+ANS HLSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS TPRRLS+VSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of CcUC01G001440 vs. NCBI nr
Match: XP_004145879.2 (50S ribosomal protein L11, chloroplastic [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 7.4e-113
Identity = 219/234 (93.59%), Postives = 226/234 (96.58%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASS+STYHQHHLLSP FSSKI+A+S  LSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 1   MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLS+VSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 181 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 234

[Close]

BLAST of CcUC01G001440 vs. NCBI nr
Match: KAE8647824.1 (hypothetical protein Csa_000647 [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 7.4e-113
Identity = 219/234 (93.59%), Postives = 226/234 (96.58%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASS+STYHQHHLLSP FSSKI+A+S  LSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 87  MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 146

Query: 61  ISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLS+VSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 147 ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 206

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 207 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 266

Query: 181 KITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 267 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 320

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BLAST of CcUC01G001440 vs. NCBI nr
Match: XP_022155580.1 (50S ribosomal protein L11, chloroplastic [Momordica charantia])

HSP 1 Score: 402.5 bits (1033), Expect = 2.5e-108
Identity = 216/235 (91.91%), Postives = 223/235 (94.89%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPLFSSKITAN-SKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSS 60
           MASSLSTY QHHLLSP FSSK +AN  K LSSPFL  P+SGLSSNFNFSL+FLSNGQSSS
Sbjct: 1   MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSS 60

Query: 61  LISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120
           L+S  PRRLS++SMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA
Sbjct: 61  LLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120

Query: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKV 180
           FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ EKV
Sbjct: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKV 180

Query: 181 GKITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           GKITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 GKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 234

[Close]

BLAST of CcUC01G001440 vs. ExPASy Swiss-Prot
Match: Q9MAP3 (50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-82
Identity = 167/221 (75.57%), Postives = 193/221 (87.33%), Query Frame = 0


Query: 14  LSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSLISPTPRRLSIVSM 73
           LS L SS  T++S H +S    S S+ LSS  N S++FL   Q S L+S TPR L++++M
Sbjct: 6   LSTLCSS--TSSSLHPNSKLSHSLSAKLSSKANVSVQFLGKKQ-SPLLSSTPRFLTVIAM 65

Query: 74  APPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAG 133
           APP  KPGGK+KKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAG
Sbjct: 66  APP--KPGGKAKKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAG 125

Query: 134 YVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRMIAAE 193
           Y+IPVEITV+DDKSFTF+LKTPPASVLLLKAAGVEKGSKDP+ +KVG ITI+QLR IAAE
Sbjct: 126 YIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAE 185

Query: 194 KLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KLPDLNCTTIESAMRIIAGTAANMGI++DPP+LEPKKK ++
Sbjct: 186 KLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKKKAVL 221

[Close]

BLAST of CcUC01G001440 vs. ExPASy Swiss-Prot
Match: P31164 (50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea OX=3562 GN=rpl11 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.0e-76
Identity = 161/220 (73.18%), Postives = 183/220 (83.18%), Query Frame = 0


Query: 15  SPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSLISPTPRRLSIVSMA 74
           +P  SS  +   + L S  LT  S  LSSN   SL+FL++    S  S + RRLSIV+MA
Sbjct: 8   APSSSSITSPIPRKLCSSLLTPSSLSLSSNPRNSLQFLNSKLFLSPPSTSHRRLSIVAMA 67

Query: 75  PPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGY 134
           P   KP GK+KKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADK G+
Sbjct: 68  P---KP-GKAKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGF 127

Query: 135 VIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRMIAAEK 194
           VIPVEITV+DDKSFTF+LKTPPASVLLLKA+G EKGSKDP+ EKVGKITI+QLR IA EK
Sbjct: 128 VIPVEITVFDDKSFTFILKTPPASVLLLKASGAEKGSKDPQMEKVGKITIDQLRGIATEK 187

Query: 195 LPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           LPDLNCTTIESAMRIIAGTAANMGI++DPP+L  KKKE++
Sbjct: 188 LPDLNCTTIESAMRIIAGTAANMGIDIDPPILVKKKKEVI 223

[Close]

BLAST of CcUC01G001440 vs. ExPASy Swiss-Prot
Match: O78412 (50S ribosomal protein L11, chloroplastic OS=Guillardia theta OX=55529 GN=rpl11 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-50
Identity = 101/138 (73.19%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 84  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           +KKV+ +IKLALEAGKATPAPPVGPALG +GVNI+ FCKDYNA+TADKAG +IPVEITVY
Sbjct: 2   AKKVVAIIKLALEAGKATPAPPVGPALGQRGVNIVMFCKDYNARTADKAGLIIPVEITVY 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRMIAAEKLPDLNCTTI 203
           +DKS+TFVLKTPPASVLL KAAGV+KGS +PK  +VG +T +Q+  IA  KLPDLN   +
Sbjct: 62  EDKSYTFVLKTPPASVLLAKAAGVQKGSGNPKKTQVGSVTKKQVEEIAQTKLPDLNTRRL 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           ESA+RII GTA NMGI V
Sbjct: 122 ESAIRIIEGTAKNMGIGV 139

[Close]

BLAST of CcUC01G001440 vs. ExPASy Swiss-Prot
Match: B7JWT8 (50S ribosomal protein L11 OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=rplK PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-50
Identity = 99/138 (71.74%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 84  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           +KKV+ MIKLAL AGKA PAPPVGPALG  GVNIMAFCK+YNAKTAD+AG VIPVEI+V+
Sbjct: 2   AKKVVAMIKLALPAGKANPAPPVGPALGQHGVNIMAFCKEYNAKTADQAGMVIPVEISVF 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRMIAAEKLPDLNCTTI 203
           +D+SFTFVLKTPPASVL+ KAAGVE+GS  P   KVG IT +QLR IA  K+PDLN   I
Sbjct: 62  EDRSFTFVLKTPPASVLIRKAAGVERGSNQPNKTKVGSITQDQLREIAQTKMPDLNANDI 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           E+AM+I+AGTA NMG+ +
Sbjct: 122 EAAMKIVAGTARNMGVTI 139

[Close]

BLAST of CcUC01G001440 vs. ExPASy Swiss-Prot
Match: B8HVL5 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplK PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-49
Identity = 94/138 (68.12%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 84  SKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVEITVY 143
           +KKV+ +IKLA+ AGKA PAPP+GPALG  GVNIM FCK+YNA+TAD+AG VIPVEI+VY
Sbjct: 2   AKKVVAIIKLAITAGKANPAPPIGPALGQHGVNIMMFCKEYNARTADQAGLVIPVEISVY 61

Query: 144 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRMIAAEKLPDLNCTTI 203
           +D+SFTF+LKTPPASVL+ KAAG+E+GS +P  +KVGKIT  QLR IA  KLPDLN   +
Sbjct: 62  EDRSFTFILKTPPASVLIQKAAGIERGSGEPNKKKVGKITTAQLREIAQTKLPDLNANDV 121

Query: 204 ESAMRIIAGTAANMGIEV 222
           ++AMRI+AGTA NMG+ +
Sbjct: 122 DAAMRIVAGTARNMGVTI 139

[Close]

BLAST of CcUC01G001440 vs. ExPASy TrEMBL
Match: A0A5D3C6S0 (50S ribosomal protein L11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001370 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 9.4e-114
Identity = 220/234 (94.02%), Postives = 227/234 (97.01%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASSLSTYHQHHLLSP FSSKI+ANS HLSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS TPRRLS+VSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of CcUC01G001440 vs. ExPASy TrEMBL
Match: A0A1S3AU30 (50S ribosomal protein L11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482876 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 9.4e-114
Identity = 220/234 (94.02%), Postives = 227/234 (97.01%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASSLSTYHQHHLLSP FSSKI+ANS HLSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 1   MASSLSTYHQHHLLSPSFSSKISANSNHLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 60

Query: 61  ISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           IS TPRRLS+VSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISHTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180

Query: 181 KITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           K+TIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPK+K +V
Sbjct: 181 KVTIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKQKAVV 234

[Close]

BLAST of CcUC01G001440 vs. ExPASy TrEMBL
Match: A0A0A0KQJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146890 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.6e-113
Identity = 219/234 (93.59%), Postives = 226/234 (96.58%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASS+STYHQHHLLSP FSSKI+A+S  LSSPFLTS SSGLSS FNFSLRFL+NGQSSSL
Sbjct: 46  MASSISTYHQHHLLSPSFSSKISASSNRLSSPFLTSSSSGLSSKFNFSLRFLTNGQSSSL 105

Query: 61  ISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLS+VSMAPPKAKPGGK+KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 106 ISPTPRRLSVVSMAPPKAKPGGKAKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 165

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG
Sbjct: 166 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 225

Query: 181 KITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIE+DPPVLEPK K LV
Sbjct: 226 KITIEQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIEIDPPVLEPKTKALV 279

[Close]

BLAST of CcUC01G001440 vs. ExPASy TrEMBL
Match: A0A6J1DMT9 (50S ribosomal protein L11, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022678 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 216/235 (91.91%), Postives = 223/235 (94.89%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPLFSSKITAN-SKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSS 60
           MASSLSTY QHHLLSP FSSK +AN  K LSSPFL  P+SGLSSNFNFSL+FLSNGQSSS
Sbjct: 1   MASSLSTY-QHHLLSPQFSSKTSANGGKQLSSPFLALPTSGLSSNFNFSLKFLSNGQSSS 60

Query: 61  LISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120
           L+S  PRRLS++SMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA
Sbjct: 61  LLSSRPRRLSVISMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMA 120

Query: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKV 180
           FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ EKV
Sbjct: 121 FCKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAEKV 180

Query: 181 GKITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           GKITIEQLR IAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 GKITIEQLRAIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 234

[Close]

BLAST of CcUC01G001440 vs. ExPASy TrEMBL
Match: A0A6J1HY65 (50S ribosomal protein L11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469089 PE=3 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.2e-107
Identity = 212/234 (90.60%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MASSLSTYHQHHLLSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSL 60
           MASSLS YH        FSSK TANSKHLSS FL SPSSG SS FNFSLRF SNGQSSSL
Sbjct: 1   MASSLSIYHP-------FSSKFTANSKHLSSSFLASPSSGFSSKFNFSLRFFSNGQSSSL 60

Query: 61  ISPTPRRLSIVSMAPPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAF 120
           ISPTPRRLS+VSMAPPKAKPGGKSKKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAF
Sbjct: 61  ISPTPRRLSVVSMAPPKAKPGGKSKKVIGVIKLALEAGKATPAPPVGPALGSKGVNIMAF 120

Query: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVG 180
           CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDP+ +KVG
Sbjct: 121 CKDYNAKTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPQAQKVG 180

Query: 181 KITIEQLRMIAAEKLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KITIEQLR+IAAEKLPDLNCTTIESAMR+IAGTAANMGIEVDPPVLEPKKKELV
Sbjct: 181 KITIEQLRVIAAEKLPDLNCTTIESAMRVIAGTAANMGIEVDPPVLEPKKKELV 227

[Close]

BLAST of CcUC01G001440 vs. TAIR 10
Match: AT1G32990.1 (plastid ribosomal protein l11 )

HSP 1 Score: 307.8 bits (787), Expect = 7.7e-84
Identity = 167/221 (75.57%), Postives = 193/221 (87.33%), Query Frame = 0


Query: 14  LSPLFSSKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSLISPTPRRLSIVSM 73
           LS L SS  T++S H +S    S S+ LSS  N S++FL   Q S L+S TPR L++++M
Sbjct: 6   LSTLCSS--TSSSLHPNSKLSHSLSAKLSSKANVSVQFLGKKQ-SPLLSSTPRFLTVIAM 65

Query: 74  APPKAKPGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAG 133
           APP  KPGGK+KKV+G+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNA+TADKAG
Sbjct: 66  APP--KPGGKAKKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAG 125

Query: 134 YVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRMIAAE 193
           Y+IPVEITV+DDKSFTF+LKTPPASVLLLKAAGVEKGSKDP+ +KVG ITI+QLR IAAE
Sbjct: 126 YIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAE 185

Query: 194 KLPDLNCTTIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 235
           KLPDLNCTTIESAMRIIAGTAANMGI++DPP+LEPKKK ++
Sbjct: 186 KLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKKKAVL 221

[Close]

BLAST of CcUC01G001440 vs. TAIR 10
Match: AT5G51610.1 (Ribosomal protein L11 family protein )

HSP 1 Score: 165.6 bits (418), Expect = 4.7e-41
Identity = 102/212 (48.11%), Postives = 130/212 (61.32%), Query Frame = 0


Query: 20  SKITANSKHLSSPFLTSPSSGLSSNFNFSLRFLSNGQSSSLISPTPRRLSIVSMAPPKAK 79
           S + + +  L  P   S S+ L+S  N S +FL+N Q S L+S TPR L++++ A   +K
Sbjct: 7   SHLCSCTSSLHHPLSHSISANLTSKTNLSFQFLANRQ-SPLLSSTPRSLTVIAGATAPSK 66

Query: 80  PGGKSKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTADKAGYVIPVE 139
             GK+KKV+G++K+ + AGKAT APP                                  
Sbjct: 67  LRGKTKKVVGIVKMNVWAGKATLAPP---------------------------------- 126

Query: 140 ITVYDDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRMIAAEKLPDLN 199
                D+SFTF+LKTPP S LLLKAAGV+KGSKDPK  KVG ITI+Q+R IA  KLP+LN
Sbjct: 127 -----DQSFTFILKTPPTSFLLLKAAGVKKGSKDPKQIKVGMITIDQVRKIAEVKLPELN 178

Query: 200 CTTIESAMRIIAGTAANMGIEVDPPVLEPKKK 232
           CTTI S MR IAGTA NMGI++DPP+LEPK K
Sbjct: 187 CTTIVSTMRTIAGTAGNMGIDIDPPILEPKNK 178

[Close]

BLAST of CcUC01G001440 vs. TAIR 10
Match: AT4G35490.1 (mitochondrial ribosomal protein L11 )

HSP 1 Score: 103.2 bits (256), Expect = 2.9e-22
Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 85  KKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNAKTAD-KAGYVIPVEITVY 144
           + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NA+T   K    + V IT +
Sbjct: 11  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70

Query: 145 DDKSFTFVLKTPPASVLLLKAAGVEKGSKDPKGEKVGKITIEQLRMIAAEKLPDLNC--T 204
            D SF F +K+P  S  + KAAGV+KGS  P    V  +++  +  IA  K  D  C   
Sbjct: 71  KDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVKQTDPFCQYM 130

Query: 205 TIESAMRIIAGTAANMGIEV 222
            +ES  + I GTA +MGI++
Sbjct: 131 PLESICKSIIGTANSMGIKI 150

The following BLAST results are available for this feature:

BLAST of CcUC01G001440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876314.1	3.2e-116	96.58	50S ribosomal protein L11, chloroplastic [Benincasa hispida]	[more]
XP_008437462.1	1.9e-113	94.02	PREDICTED: 50S ribosomal protein L11, chloroplastic [Cucumis melo] >KAA0042635.1...	[more]
XP_004145879.2	7.4e-113	93.59	50S ribosomal protein L11, chloroplastic [Cucumis sativus]	[more]
KAE8647824.1	7.4e-113	93.59	hypothetical protein Csa_000647 [Cucumis sativus]	[more]
XP_022155580.1	2.5e-108	91.91	50S ribosomal protein L11, chloroplastic [Momordica charantia]	[more]

BLAST of CcUC01G001440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAP3	1.1e-82	75.57	50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
P31164	2.0e-76	73.18	50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea OX=3562 GN=rpl11 P...	[more]
O78412	1.1e-50	73.19	50S ribosomal protein L11, chloroplastic OS=Guillardia theta OX=55529 GN=rpl11 P...	[more]
B7JWT8	2.4e-50	71.74	50S ribosomal protein L11 OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=r...	[more]
B8HVL5	1.2e-49	68.12	50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39...	[more]

BLAST of CcUC01G001440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6S0	9.4e-114	94.02	50S ribosomal protein L11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3AU30	9.4e-114	94.02	50S ribosomal protein L11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482876...	[more]
A0A0A0KQJ8	3.6e-113	93.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146890 PE=3 SV=1	[more]
A0A6J1DMT9	1.2e-108	91.91	50S ribosomal protein L11, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1HY65	2.2e-107	90.60	50S ribosomal protein L11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]

BLAST of CcUC01G001440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32990.1	7.7e-84	75.57	plastid ribosomal protein l11	[more]
AT5G51610.1	4.7e-41	48.11	Ribosomal protein L11 family protein	[more]
AT4G35490.1	2.9e-22	43.57	mitochondrial ribosomal protein L11	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000911	Ribosomal protein L11/L12	SMART	SM00649	rl11c	coord: 91..222 e-value: 5.5E-80 score: 281.7
IPR000911	Ribosomal protein L11/L12	PANTHER	PTHR11661	60S RIBOSOMAL PROTEIN L12	coord: 79..222
IPR000911	Ribosomal protein L11/L12	HAMAP	MF_00736	Ribosomal_L11	coord: 87..223 score: 29.490072
IPR000911	Ribosomal protein L11/L12	CDD	cd00349	Ribosomal_L11	coord: 91..221 e-value: 5.54208E-71 score: 211.155
IPR020784	Ribosomal protein L11, N-terminal	PFAM	PF03946	Ribosomal_L11_N	coord: 84..148 e-value: 1.3E-31 score: 108.2
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	GENE3D	1.10.10.250		coord: 154..234 e-value: 1.6E-37 score: 129.2
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	SUPERFAMILY	46906	Ribosomal protein L11, C-terminal domain	coord: 149..222
IPR020783	Ribosomal protein L11, C-terminal	PFAM	PF00298	Ribosomal_L11	coord: 153..221 e-value: 3.0E-24 score: 85.3
IPR006519	Ribosomal protein L11, bacterial-type	TIGRFAM	TIGR01632	TIGR01632	coord: 85..222 e-value: 1.5E-62 score: 207.6
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	GENE3D	3.30.1550.10		coord: 82..153 e-value: 2.4E-36 score: 125.2
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	SUPERFAMILY	54747	Ribosomal L11/L12e N-terminal domain	coord: 81..166
None	No IPR available	PANTHER	PTHR11661:SF10	RIBOSOMAL PROTEIN L11	coord: 79..222
IPR020785	Ribosomal protein L11, conserved site	PROSITE	PS00359	RIBOSOMAL_L11	coord: 208..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G001440.1	CcUC01G001440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome