CcUC01G000090 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC01G000090
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	60S acidic ribosomal protein P1
Location	CicolChr01: 55779 .. 56384 (-)
RNA-Seq Expression	CcUC01G000090
Synteny	CcUC01G000090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACCAGTGAACTCGCTTGCACCTACGCCGCCTTGATTCTTCATGGCGACGCCATCTCCATCGCTGTACCTATCAATTTTCCTTTTTACCTCCTTCGATTTCTAACAGCTCTCTTCTTCTTTCTTTCCATATTTTAATTTAGGCCGAGAAGATTTCCACGTTGGTGAACGCTGCCGGCCTTACCGTCGAATCCTACTGGCCTTCTCTCTTTTCTCTCTCTATCTCATCTTCTGCCGGTAATGCCGCTCCTGCGCCCGTCGACAAGCAGGTACGCGGTTTTTTGGTACTTGCCTAAATAATAAATAATTCGAAATTAGGATTATATAAGTTTATATATGATTTTAAATCGCTGCGGGCAATTGAGCCTATAGCTCCTTCTTACTGGAGCATATATACTATTGATTTTGATTTACGTATATTCCTGGTTATATATGGTTGTATTGTACCTGTATCATGTGCAGGAAGAGTTGATGGAAGAGAGCGAGGATGACATGGTCTTGGGTTTGTTTGATTAGAGATTTACTATTTTCCTTCCTTTTATTAGTTTCTTCTTAAACTACATTTAATTACCATCGAGACGTAGTACGATTCTGTGTACATTG

mRNA sequence

ATGTCTACCAGTGAACTCGCTTGCACCTACGCCGCCTTGATTCTTCATGGCGACGCCATCTCCATCGCTGCCGAGAAGATTTCCACGTTGGTGAACGCTGCCGGCCTTACCGTCGAATCCTACTGGCCTTCTCTCTTTTCTCTCTCTATCTCATCTTCTGCCGGTAATGCCGCTCCTGCGCCCGTCGACAAGCAGGAAGAGTTGATGGAAGAGAGCGAGGATGACATGGTCTTGGGTTTGTTTGATTAGAGATTTACTATTTTCCTTCCTTTTATTAGTTTCTTCTTAAACTACATTTAATTACCATCGAGACGTAGTACGATTCTGTGTACATTG

Coding sequence (CDS)

ATGTCTACCAGTGAACTCGCTTGCACCTACGCCGCCTTGATTCTTCATGGCGACGCCATCTCCATCGCTGCCGAGAAGATTTCCACGTTGGTGAACGCTGCCGGCCTTACCGTCGAATCCTACTGGCCTTCTCTCTTTTCTCTCTCTATCTCATCTTCTGCCGGTAATGCCGCTCCTGCGCCCGTCGACAAGCAGGAAGAGTTGATGGAAGAGAGCGAGGATGACATGGTCTTGGGTTTGTTTGATTAG

Protein sequence

MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFSLSISSSAGNAAPAPVDKQEELMEESEDDMVLGLFD

Homology

[Close]

BLAST of CcUC01G000090 vs. NCBI nr
Match: XP_022138164.1 (60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia])

HSP 1 Score: 107.8 bits (268), Expect = 4.4e-20
Identity = 64/112 (57.14%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 1   MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------L 60
           MSTSELACTYAALILH DAIS+ AEKI+TLV AAGLTVESYWPSLF+            L
Sbjct: 1   MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60

Query: 61  SISSSAGNA------------------APAPVDKQEELMEESEDDMVLGLFD 83
           ++ S+A +A                  APAPV+K+EE +EESEDD+V GLFD
Sbjct: 61  NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFGLFD 112

[Close]

BLAST of CcUC01G000090 vs. NCBI nr
Match: XP_022138163.1 (60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia])

HSP 1 Score: 101.3 bits (251), Expect = 4.1e-18
Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 5   ELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------LSISS 64
           ELACTYAALILH DAIS+ AEKI+TLV AAGLTVESYWPSLF+            L++ S
Sbjct: 33  ELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 92

Query: 65  SAGNA------------------APAPVDKQEELMEESEDDMVLGLFD 83
           +A +A                  APAPV+K+EE +EESEDD+V GLFD
Sbjct: 93  AAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFGLFD 140

[Close]

BLAST of CcUC01G000090 vs. NCBI nr
Match: CAA7023305.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 89.0 bits (219), Expect = 2.1e-14
Identity = 56/111 (50.45%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 1   MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------- 60
           M TSELACTYAALILH D I I AEKISTLV AA + VESYWP LF+             
Sbjct: 1   MGTSELACTYAALILHDDGIDITAEKISTLVKAANVDVESYWPGLFAKLCQKKNIDDLIM 60

Query: 61  -------------LSISSSAGNAAPAPVD---KQEELMEESEDDMVLGLFD 83
                         + +S+A  A+PA  +   K+EE+ EESEDDMV GLFD
Sbjct: 61  NVGVGGGGAAAPVAAAASAASQASPAAEETKKKKEEVKEESEDDMVFGLFD 111

[Close]

BLAST of CcUC01G000090 vs. NCBI nr
Match: GFP88745.1 (60S acidic ribosomal protein p1 [Phtheirospermum japonicum])

HSP 1 Score: 88.2 bits (217), Expect = 3.6e-14
Identity = 54/112 (48.21%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 1   MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLF-------------- 60
           MS  ELACTYAAL+LH D I++ AEKI+TLV AA LTVESYWPSLF              
Sbjct: 1   MSVGELACTYAALVLHDDGIAVTAEKIATLVKAANLTVESYWPSLFAKLCEKKNIEDLVM 60

Query: 61  --------SLSISSSAGN--------AAPAPVDKQEELMEESEDDMVLGLFD 83
                   ++++S+ AG         AAPA  +K+EE  EES+DDM   LFD
Sbjct: 61  NVGSGGGAAVAVSAPAGGASGGAAAAAAPAAEEKKEEAKEESDDDMGFSLFD 112

[Close]

BLAST of CcUC01G000090 vs. NCBI nr
Match: GFP84170.1 (60S acidic ribosomal protein p1 [Phtheirospermum japonicum])

HSP 1 Score: 88.2 bits (217), Expect = 3.6e-14
Identity = 51/95 (53.68%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 1  MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------L 60
          MS  ELACTYAAL+LH D I++  EKI+TLV AA LTVESYWPSLF+            +
Sbjct: 1  MSVGELACTYAALVLHDDGIAVTVEKITTLVQAANLTVESYWPSLFAKLCEKKNIEDLVM 60

Query: 61 SISSSAG-NAAPAPVDKQEELMEESEDDMVLGLFD 83
          ++ S  G  AA A  +K+EE  EES+DDM   LFD
Sbjct: 61 NVGSGGGTTAALAAEEKKEEAREESDDDMGFSLFD 95

[Close]

BLAST of CcUC01G000090 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.9e-14
Identity = 50/109 (45.87%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 1   MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------L 60
           M++ ELAC YAALIL  D I+I AEKI+T+V AA + VESYWP+LF+            L
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 61  SISSSAG---------------NAAPAPVDKQEELMEESEDDMVLGLFD 83
           S+ S  G                AAPA  +K+EE  EES+DDM   LFD
Sbjct: 61  SVGSGGGAAPVAAAAPAGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109

[Close]

BLAST of CcUC01G000090 vs. ExPASy Swiss-Prot
Match: P18660 (60S acidic ribosomal protein P1 OS=Gallus gallus OX=9031 GN=RPLP1 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.0e-12
Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 2   STSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFSLSISS--------- 61
           S SELAC Y+ALILH D +++  +KI+ L+ AAG+ VE +WP LF+ ++++         
Sbjct: 3   SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICN 62

Query: 62  -------------------SAGNAAPAPVDKQEELMEESE---DDMVLGLFD 83
                              + G AAPA   K+EE  EESE   DDM  GLFD
Sbjct: 63  VGAGGGAPAAAAPAGGAAPAGGGAAPAEEKKEEEKKEESEESDDDMGFGLFD 114

[Close]

BLAST of CcUC01G000090 vs. ExPASy Swiss-Prot
Match: P29763 (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.0e-11
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 0


Query: 1   MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS-----------LS 60
           MSTSELACTYAALILH D + I A+ I+T+  AAG+ VE YWP+LF+           ++
Sbjct: 1   MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLIT 60

Query: 61  ISSSAGNAAPA-------------PVDKQEELMEES-EDDMVLGLFD 83
              + G AAPA                K+EE  E S E+DM   LFD
Sbjct: 61  NVGAGGGAAPAAAAPAAGGAPAAGAAPKKEEKKEPSEEEDMGFSLFD 107

[Close]

BLAST of CcUC01G000090 vs. ExPASy Swiss-Prot
Match: P47955 (60S acidic ribosomal protein P1 OS=Mus musculus OX=10090 GN=Rplp1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 0


Query: 2   STSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFSLSI----------- 61
           S SELAC Y+ALILH D +++  +KI+ L+ AAG++VE +WP LF+ ++           
Sbjct: 3   SVSELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICN 62

Query: 62  -----------SSSAGNAAPA---------PVDKQEELMEESEDDMVLGLFD 83
                      ++ AG AAP+          V+ ++E  EESEDDM  GLFD
Sbjct: 63  VGAGGPAPAAGAAPAGGAAPSTAAAPAEEKKVEAKKEESEESEDDMGFGLFD 114

[Close]

BLAST of CcUC01G000090 vs. ExPASy Swiss-Prot
Match: P91913 (60S acidic ribosomal protein P1 OS=Caenorhabditis elegans OX=6239 GN=rla-1 PE=3 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-11
Identity = 48/109 (44.04%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 2   STSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------LS 61
           S  ELAC YAALIL  D ++I  EKI+TL+ AA +  E YWP LF+             S
Sbjct: 3   SNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPYWPGLFAKALEGVDVKNLITS 62

Query: 62  ISS---------------SAGNAAP-APVDKQEELMEESEDDMVLGLFD 83
           +SS               +AG AAP A   K+EE  EES+DDM  GLFD
Sbjct: 63  VSSGAGSGPAPAAAAAAPAAGGAAPAAETKKKEEPKEESDDDMGFGLFD 111

[Close]

BLAST of CcUC01G000090 vs. ExPASy TrEMBL
Match: A0A6J1C9A3 (60S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.1e-20
Identity = 64/112 (57.14%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 1   MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------L 60
           MSTSELACTYAALILH DAIS+ AEKI+TLV AAGLTVESYWPSLF+            L
Sbjct: 1   MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60

Query: 61  SISSSAGNA------------------APAPVDKQEELMEESEDDMVLGLFD 83
           ++ S+A +A                  APAPV+K+EE +EESEDD+V GLFD
Sbjct: 61  NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFGLFD 112

[Close]

BLAST of CcUC01G000090 vs. ExPASy TrEMBL
Match: A0A6J1CC92 (60S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18
Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 5   ELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------LSISS 64
           ELACTYAALILH DAIS+ AEKI+TLV AAGLTVESYWPSLF+            L++ S
Sbjct: 33  ELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 92

Query: 65  SAGNA------------------APAPVDKQEELMEESEDDMVLGLFD 83
           +A +A                  APAPV+K+EE +EESEDD+V GLFD
Sbjct: 93  AAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFGLFD 140

[Close]

BLAST of CcUC01G000090 vs. ExPASy TrEMBL
Match: A0A6D2I4R4 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS10540 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.0e-14
Identity = 56/111 (50.45%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 1   MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------- 60
           M TSELACTYAALILH D I I AEKISTLV AA + VESYWP LF+             
Sbjct: 1   MGTSELACTYAALILHDDGIDITAEKISTLVKAANVDVESYWPGLFAKLCQKKNIDDLIM 60

Query: 61  -------------LSISSSAGNAAPAPVD---KQEELMEESEDDMVLGLFD 83
                         + +S+A  A+PA  +   K+EE+ EESEDDMV GLFD
Sbjct: 61  NVGVGGGGAAAPVAAAASAASQASPAAEETKKKKEEVKEESEDDMVFGLFD 111

[Close]

BLAST of CcUC01G000090 vs. ExPASy TrEMBL
Match: V4KQ04 (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005602mg PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-14
Identity = 54/110 (49.09%), Postives = 65/110 (59.09%), Query Frame = 0


Query: 2   STSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------LS 61
           +TSELACTYAALILH D I I AEKIS LV AA + VESYWPSLF+            ++
Sbjct: 4   TTSELACTYAALILHDDGIEITAEKISKLVKAANVNVESYWPSLFAKLCQKKNIDDLIMN 63

Query: 62  ISSSAGNAAPAPVD-----------------KQEELMEESEDDMVLGLFD 83
           + +S G AAP   +                 K+E++ EESEDDMV GLFD
Sbjct: 64  VGASGGAAAPVATNDVPAATQAVPAAEDIKKKKEDVKEESEDDMVFGLFD 113

[Close]

BLAST of CcUC01G000090 vs. ExPASy TrEMBL
Match: A0A7I8KP78 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_07009550 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.1e-14
Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 1   MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------- 60
           MS  ELACTYAALILH D+ISI AEKI+TLV AA + V+SYWPSLF+             
Sbjct: 1   MSVGELACTYAALILHDDSISITAEKIATLVKAANVKVDSYWPSLFAKLLEKRSVDDLIL 60

Query: 61  ----------LSISSSAGN----AAPAPV-DKQEELMEESEDDMVLGLFD 83
                     ++++++AG     AAPAPV +K+EE  EES+DDM   LFD
Sbjct: 61  NVGSGGGGAPVAVAATAGGGAAAAAPAPVEEKKEEPKEESDDDMGFSLFD 110

[Close]

BLAST of CcUC01G000090 vs. TAIR 10
Match: AT5G24510.1 (60S acidic ribosomal protein family )

HSP 1 Score: 80.9 bits (198), Expect = 5.3e-16
Identity = 55/111 (49.55%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 1   MSTSELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS----------LSI 60
           MSTSELACTYAALILH D I I AE IS LV  A + VESYWPSLF+          L +
Sbjct: 1   MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60

Query: 61  SSSAG---------NAAPA-------PVDKQEE---LMEESEDDMVLGLFD 83
           +  AG          AAP        P +K+ E   + EESEDDM++GLFD
Sbjct: 61  NVGAGGCGVARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIGLFD 111

[Close]

BLAST of CcUC01G000090 vs. TAIR 10
Match: AT1G01100.3 (60S acidic ribosomal protein family )

HSP 1 Score: 74.7 bits (182), Expect = 3.8e-14
Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 1  MST-SELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------ 60
          MST  ELAC+YA +IL  + I+I A+KI+TLV AAG+++ESYWP LF+            
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61 LSISSSAGNAAPAPVD-KQEELMEESEDDMVLGLFD 83
          +++ +  G AAPA  + K++E  EES+ D+  GLFD
Sbjct: 61 MNVGAGGGGAAPAAEEKKKDEPAEESDGDLGFGLFD 96

[Close]

BLAST of CcUC01G000090 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 67.0 bits (162), Expect = 8.0e-12
Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 1   MST-SELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------ 60
           MST  ELAC+YA +IL  + I+I A+KI+TLV AAG+T+ESYWP LF+            
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LSISSSAGNAAP------------------APVDKQEELMEESEDDMVLGLFD 83
           +++ +  G  AP                  A   K++E  EES+ D+  GLFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of CcUC01G000090 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 67.0 bits (162), Expect = 8.0e-12
Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 1   MST-SELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLFS------------ 60
           MST  ELAC+YA +IL  + I+I A+KI+TLV AAG+T+ESYWP LF+            
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  LSISSSAGNAAP------------------APVDKQEELMEESEDDMVLGLFD 83
           +++ +  G  AP                  A   K++E  EES+ D+  GLFD
Sbjct: 61  MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of CcUC01G000090 vs. TAIR 10
Match: AT4G00810.1 (60S acidic ribosomal protein family )

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11
Identity = 45/113 (39.82%), Postives = 62/113 (54.87%), Query Frame = 0


Query: 1   MST-SELACTYAALILHGDAISIAAEKISTLVNAAGLTVESYWPSLF------------- 60
           MST  ELAC+YA +IL  + I+I ++KI+TLV AAG+ +ESYWP LF             
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60

Query: 61  --------------SLSISSSAGN---AAPAPVDKQEELMEESEDDMVLGLFD 83
                         S +  ++AG    AAPA  +K++E  EES+ D+  GLFD
Sbjct: 61  MNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

The following BLAST results are available for this feature:

BLAST of CcUC01G000090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138164.1	4.4e-20	57.14	60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia]	[more]
XP_022138163.1	4.1e-18	55.56	60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia]	[more]
CAA7023305.1	2.1e-14	50.45	unnamed protein product [Microthlaspi erraticum]	[more]
GFP88745.1	3.6e-14	48.21	60S acidic ribosomal protein p1 [Phtheirospermum japonicum]	[more]
GFP84170.1	3.6e-14	53.68	60S acidic ribosomal protein p1 [Phtheirospermum japonicum]	[more]

BLAST of CcUC01G000090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52855	4.9e-14	45.87	60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1	[more]
P18660	6.0e-12	39.29	60S acidic ribosomal protein P1 OS=Gallus gallus OX=9031 GN=RPLP1 PE=3 SV=1	[more]
P29763	1.0e-11	43.93	60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1	[more]
P47955	1.3e-11	38.39	60S acidic ribosomal protein P1 OS=Mus musculus OX=10090 GN=Rplp1 PE=1 SV=1	[more]
P91913	1.7e-11	44.04	60S acidic ribosomal protein P1 OS=Caenorhabditis elegans OX=6239 GN=rla-1 PE=3 ...	[more]

BLAST of CcUC01G000090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C9A3	2.1e-20	57.14	60S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CC92	2.0e-18	55.56	60S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6D2I4R4	1.0e-14	50.45	Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS10540 ...	[more]
V4KQ04	1.7e-14	49.09	Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10005602mg PE=...	[more]
A0A7I8KP78	5.1e-14	50.00	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_07009550 PE=3 SV...	[more]

BLAST of CcUC01G000090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24510.1	5.3e-16	49.55	60S acidic ribosomal protein family	[more]
AT1G01100.3	3.8e-14	45.83	60S acidic ribosomal protein family	[more]
AT5G47700.1	8.0e-12	38.94	60S acidic ribosomal protein family	[more]
AT5G47700.2	8.0e-12	38.94	60S acidic ribosomal protein family	[more]
AT4G00810.1	1.4e-11	39.82	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..53 e-value: 9.0E-21 score: 75.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..74
None	No IPR available	PANTHER	PTHR45696	60S ACIDIC RIBOSOMAL PROTEIN P1	coord: 1..47
None	No IPR available	CDD	cd05831	Ribosomal_P1	coord: 5..81 e-value: 5.31447E-18 score: 69.6579

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC01G000090.1	CcUC01G000090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005840	ribosome